Miyakogusa Predicted Gene

Lj3g3v3016610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3016610.1 Non Chatacterized Hit- tr|K3Y785|K3Y785_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010076,38.97,9e-19,AMINO ACID TRANSPORTER,NULL; Aa_trans,Amino
acid transporter, transmembrane,CUFF.45157.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08230.2 | Symbols:  | Transmembrane amino acid transporter f...   199   7e-52
AT5G41800.1 | Symbols:  | Transmembrane amino acid transporter f...   124   2e-29
AT1G67640.1 | Symbols:  | Transmembrane amino acid transporter f...    71   3e-13
AT1G71680.1 | Symbols:  | Transmembrane amino acid transporter f...    69   8e-13
AT1G61270.1 | Symbols:  | Transmembrane amino acid transporter f...    69   1e-12
AT1G48640.1 | Symbols:  | Transmembrane amino acid transporter f...    68   2e-12
AT1G24400.1 | Symbols: LHT2, AATL2, ATLHT2 | lysine histidine tr...    68   3e-12
AT5G40780.1 | Symbols: LHT1 | lysine histidine transporter 1 | c...    66   8e-12
AT5G40780.2 | Symbols:  | lysine histidine transporter 1 | chr5:...    66   1e-11
AT3G01760.1 | Symbols:  | Transmembrane amino acid transporter f...    65   2e-11
AT1G25530.1 | Symbols:  | Transmembrane amino acid transporter f...    63   8e-11
AT1G47670.1 | Symbols:  | Transmembrane amino acid transporter f...    52   1e-07
AT1G58360.1 | Symbols: AAP1, NAT2 | amino acid permease 1 | chr1...    49   9e-07

>AT1G08230.2 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:2583715-2586700 REVERSE LENGTH=451
          Length = 451

 Score =  199 bits (506), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 95/136 (69%), Positives = 108/136 (79%)

Query: 16  EKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGWTAG 75
           E+     + + ++ VDAG+LFVLKSKG+W H G+HLTTSIVAP LLSLPYAF FLGW AG
Sbjct: 4   EERSGDGEKRGEEVVDAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAG 63

Query: 76  ILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQFAVC 135
           I  LV GA VTFYSY L+SL LEHHA LGNR LRFRDMA  IL P+WGRY+VGPIQ AVC
Sbjct: 64  ISCLVGGAAVTFYSYTLLSLTLEHHASLGNRYLRFRDMAHHILSPKWGRYYVGPIQMAVC 123

Query: 136 YGAVVACTLLGGQCMK 151
           YG V+A  LLGGQC+K
Sbjct: 124 YGVVIANALLGGQCLK 139


>AT5G41800.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr5:16733842-16735888 FORWARD
           LENGTH=452
          Length = 452

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/137 (48%), Positives = 86/137 (62%)

Query: 15  SEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGWTA 74
           ++ P        + D DAGALFVL+SKG W H+G+HLTT+IV PT+L+LPYAF  LGW  
Sbjct: 2   TDPPRPDPFPVTRLDSDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWWL 61

Query: 75  GILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQFAV 134
           G + L    LVTFY+Y L+S VL+H  K G R +RFR++A  +LG     Y V  IQ A+
Sbjct: 62  GFVCLTTMGLVTFYAYYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFYVVIFIQTAI 121

Query: 135 CYGAVVACTLLGGQCMK 151
             G  +   LL GQC+ 
Sbjct: 122 NTGIGIGAILLAGQCLD 138


>AT1G67640.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:25352128-25353908 REVERSE
           LENGTH=441
          Length = 441

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 5/140 (3%)

Query: 12  NENSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLG 71
           +++S   DAS +   QK+VD            W +S +H  T++V   +LSLPYA + LG
Sbjct: 4   SQSSPTKDASTK---QKNVDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSNLG 60

Query: 72  WTAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQ 131
           W  G+  +++  L+TFY+  L  +V  H    G R  R+ ++ +   G + G + V P Q
Sbjct: 61  WGPGVTIMIMSWLITFYT--LWQMVQMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQ 118

Query: 132 FAVCYGAVVACTLLGGQCMK 151
             V  G  +   + GG+ +K
Sbjct: 119 LIVEVGVDIVYMVTGGKSLK 138


>AT1G71680.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:26944671-26946731 FORWARD
           LENGTH=448
          Length = 448

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 7   TSTVVNENSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYA 66
           T T  +E ++          Q D +         +  W +S +H  T++V   +L LP+A
Sbjct: 2   TYTANDEENKGRSTDNNNHRQMDYNDWLPVTASREAKWYYSAFHNVTAMVGAGVLGLPFA 61

Query: 67  FTFLGWTAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYF 126
            + LGW  G++++++   +TFYS  L  +V  H A  G R  R+ ++ +   GP+ G + 
Sbjct: 62  MSQLGWGPGLVAIIMSWAITFYS--LWQMVQLHEAVPGKRLDRYPELGQEAFGPKLGYWI 119

Query: 127 VGPIQFAVCYGAVVACTLLGGQCMK 151
           V P Q  V   + +   + GG+ +K
Sbjct: 120 VMPQQLLVQIASDIVYNVTGGKSLK 144


>AT1G61270.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:22599665-22602140 REVERSE
           LENGTH=451
          Length = 451

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 9/141 (6%)

Query: 18  PDASQQIQHQKDVDAGAL-------FVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFL 70
           P +S QI +Q  V+  +               +W +S +H  T+IV   +L LPYA + L
Sbjct: 5   PSSSNQILNQDLVEDQSFELEDWLPITASRNANWYYSAFHNVTAIVGAGVLGLPYAMSEL 64

Query: 71  GWTAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPI 130
           GW  G++ L++  ++T Y++    ++  H    G R  R+ ++ +   G + G Y V P+
Sbjct: 65  GWGPGVVVLILSWVITLYTF--WQMIEMHEMFEGKRFDRYHELGQAAFGKKLGLYIVVPL 122

Query: 131 QFAVCYGAVVACTLLGGQCMK 151
           Q  V   A +   + GG+ +K
Sbjct: 123 QLLVETSACIVYMVTGGESLK 143


>AT1G48640.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:17986358-17988991 FORWARD
           LENGTH=453
          Length = 453

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)

Query: 13  ENSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGW 72
           E S       +++ QK++D            W +S +H  T++V   +L LP+    LGW
Sbjct: 14  EQSSLDHRIDELERQKEIDDWLPITSSRNAKWWYSTFHNVTAMVGAGVLGLPFFMAQLGW 73

Query: 73  TAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQF 132
             GI  L++  ++T Y+  L  +V  H    G R  R+ ++ +   G R G Y + P Q 
Sbjct: 74  GPGIAVLILSWIITLYT--LWQMVEMHEMVPGKRFDRYHELGQFAFGERLGLYIIVPQQI 131

Query: 133 AVCYGAVVACTLLGGQCMK 151
            V  G  +   + GGQ +K
Sbjct: 132 IVEVGVCIVYMVTGGQSLK 150


>AT1G24400.1 | Symbols: LHT2, AATL2, ATLHT2 | lysine histidine
           transporter 2 | chr1:8651563-8653561 REVERSE LENGTH=441
          Length = 441

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 2/138 (1%)

Query: 14  NSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGWT 73
           NSE   +      QK+VD            W +S +H  T++V   +LSLPYA + LGW 
Sbjct: 3   NSEMSASEVAAAKQKNVDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWG 62

Query: 74  AGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQFA 133
            G+  +V+  ++T Y+  L  +V  H    G R  R+ ++ +   G + G + V P Q  
Sbjct: 63  PGVTIMVMSWIITLYT--LWQMVEMHEIVPGKRLDRYHELGQHAFGEKLGLWIVVPQQLI 120

Query: 134 VCYGAVVACTLLGGQCMK 151
           V  G  +   + GG  +K
Sbjct: 121 VEVGVDIVYMVTGGASLK 138


>AT5G40780.1 | Symbols: LHT1 | lysine histidine transporter 1 |
           chr5:16323823-16327082 FORWARD LENGTH=446
          Length = 446

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%)

Query: 13  ENSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGW 72
            +  + D       QK+++            W +S +H  T++V   +L LPYA + LGW
Sbjct: 7   HDDHQDDEKLAAARQKEIEDWLPITSSRNAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGW 66

Query: 73  TAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQF 132
             GI  LV+  ++T Y+  L  +V  H    G R  R+ ++ +   G + G Y V P Q 
Sbjct: 67  GPGIAVLVLSWVITLYT--LWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQL 124

Query: 133 AVCYGAVVACTLLGGQCMK 151
            V  G  +   + GG+ +K
Sbjct: 125 IVEIGVCIVYMVTGGKSLK 143


>AT5G40780.2 | Symbols:  | lysine histidine transporter 1 |
           chr5:16323823-16327082 FORWARD LENGTH=445
          Length = 445

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)

Query: 14  NSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGWT 73
           + +  D       QK+++            W +S +H  T++V   +L LPYA + LGW 
Sbjct: 7   HDDHDDEKLAAARQKEIEDWLPITSSRNAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGWG 66

Query: 74  AGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQFA 133
            GI  LV+  ++T Y+  L  +V  H    G R  R+ ++ +   G + G Y V P Q  
Sbjct: 67  PGIAVLVLSWVITLYT--LWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLI 124

Query: 134 VCYGAVVACTLLGGQCMK 151
           V  G  +   + GG+ +K
Sbjct: 125 VEIGVCIVYMVTGGKSLK 142


>AT3G01760.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr3:273299-275270 FORWARD LENGTH=455
          Length = 455

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 18  PDASQQIQHQKDVDAGALFVLKS--------KGSWIHSGYHLTTSIVAPTLLSLPYAFTF 69
           PD    IQ Q  V+    F L+           +W +S +H  T+IV   +L LPYA + 
Sbjct: 5   PD---HIQDQHLVEEDQPFDLEDWLPITASRNANWYYSAFHNVTAIVGAGVLGLPYAMSE 61

Query: 70  LGWTAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGP 129
           LGW  G++ L++  ++T Y+  L  ++  H    G R  R+ ++ +   G + G Y + P
Sbjct: 62  LGWGPGVVVLILSWVITLYT--LWQMIEMHEMFEGQRFDRYHELGQAAFGKKLGLYIIVP 119

Query: 130 IQFAVCYGAVVACTLLGGQCMK 151
           +Q  V     +   + GG+ +K
Sbjct: 120 LQLLVEISVCIVYMVTGGKSLK 141


>AT1G25530.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:8964827-8967391 REVERSE LENGTH=440
          Length = 440

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 2/110 (1%)

Query: 42  GSWIHSGYHLTTSIVAPTLLSLPYAFTFLGWTAGILSLVIGALVTFYSYNLISLVLEHHA 101
             W +S +H  T+++   +LSLPYA  +LGW  G   L +   +T  +  +  +V  H  
Sbjct: 30  AKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWGPGTFVLAMTWGLTLNT--MWQMVQLHEC 87

Query: 102 KLGNRQLRFRDMARVILGPRWGRYFVGPIQFAVCYGAVVACTLLGGQCMK 151
             G R  R+ D+ R   GP+ G + V P Q  V  G  +   + GG+C+K
Sbjct: 88  VPGTRFDRYIDLGRYAFGPKLGPWIVLPQQLIVQVGCNIVYMVTGGKCLK 137


>AT1G47670.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:17536834-17539486 REVERSE
           LENGTH=519
          Length = 519

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 46  HSGYHLTTSIVAPTLLSLPYAFTFLGWTAGILSLVIGALVTFYSYNLISLVLEHHAKLGN 105
           ++ +H   + V    L LP AF FLGW+ GILSL I     +  Y L  LV  H A  G 
Sbjct: 100 YAAFHNLNAGVGFQALVLPVAFAFLGWSWGILSLTIA--YCWQLYTLWILVQLHEAVPGK 157

Query: 106 RQLRFRDMARVILGPRWGRYFVGPIQFAVCYGAVVACTLLGGQCMK 151
           R  R+ ++A+   G R G +        +  G   A  L+GG+ MK
Sbjct: 158 RYNRYVELAQAAFGERLGVWLALFPTVYLSAGTATALILIGGETMK 203


>AT1G58360.1 | Symbols: AAP1, NAT2 | amino acid permease 1 |
           chr1:21676623-21680313 FORWARD LENGTH=485
          Length = 485

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 12  NENSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLG 71
           +  +E  DA       K+VD       K  G+W+ +  H+ T+++   +LSL +A   LG
Sbjct: 11  HSTAESGDAYTVSDPTKNVDEDGR--EKRTGTWLTASAHIITAVIGSGVLSLAWAIAQLG 68

Query: 72  WTAGILSLVIGALVTFYSYNLISLVLEHHAKL-GNRQLRFRDMARVILGPR 121
           W AG   L+I + +T+++  +++        + G R   + D+ R  LG R
Sbjct: 69  WIAGTSILLIFSFITYFTSTMLADCYRAPDPVTGKRNYTYMDVVRSYLGGR 119