Miyakogusa Predicted Gene

Lj3g3v2995990.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2995990.2 tr|B7U884|B7U884_ARATH Disease resistance protein
RPP1-like protein R4 OS=Arabidopsis thaliana PE=4
,69.44,0.000001,LMWPc,Phosphotyrosine protein phosphatase I
superfamily; Phosphotyrosine protein phosphatases I,Phos,CUFF.45130.2
         (241 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G44620.1 | Symbols:  | protein tyrosine phosphatases;protein ...   290   6e-79
AT3G44620.2 | Symbols:  | protein tyrosine phosphatases;protein ...   276   1e-74

>AT3G44620.1 | Symbols:  | protein tyrosine phosphatases;protein
           tyrosine phosphatases | chr3:16193858-16195422 FORWARD
           LENGTH=239
          Length = 239

 Score =  290 bits (742), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 148/227 (65%), Positives = 174/227 (76%), Gaps = 10/227 (4%)

Query: 14  LRFCHCSQFLSPTPISSFHVPCSLKNPT-PSAISCKNRIFSP----VQASMASSTTVSDT 68
           L FCH ++   P+     H   S KNP   S I  K RI       V +SMA+      +
Sbjct: 18  LPFCHYTRQFRPS-----HFRSSDKNPNLVSIIRAKPRISHSLRCFVSSSMATPPPTQSS 72

Query: 69  DTKPFSVLFVCLGNICRSPAAEGVFTDLVKKKGLDSKFRIDSAGTIGYHEGNEADPRMRA 128
           +TKP+SVLFVCLGNICRSPAAEGVF D+VKK+GLDSKF IDSAGTI YHEGN ADPRMR+
Sbjct: 73  ETKPYSVLFVCLGNICRSPAAEGVFRDIVKKRGLDSKFNIDSAGTIDYHEGNMADPRMRS 132

Query: 129 ASKRRGIQITSISRPIKPSDFIDFDLILAMDKQNREDILEAFNRWRFRQTLPEDAHKKVK 188
           A+KRRGI+ITS+SRPIK SDF +FDLILAMD QN+EDIL+A+N W+ R   P DA KKVK
Sbjct: 133 AAKRRGIEITSLSRPIKASDFREFDLILAMDDQNKEDILKAYNVWKARGNFPPDADKKVK 192

Query: 189 LMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACDSLLENILAEN 235
           LMCSYCKKH++  VPDPYYGG QGFEKVLDLLEDAC+SLL++I A++
Sbjct: 193 LMCSYCKKHNDKFVPDPYYGGAQGFEKVLDLLEDACESLLDSITAQS 239


>AT3G44620.2 | Symbols:  | protein tyrosine phosphatases;protein
           tyrosine phosphatases | chr3:16193858-16195422 FORWARD
           LENGTH=262
          Length = 262

 Score =  276 bits (705), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 148/250 (59%), Positives = 174/250 (69%), Gaps = 33/250 (13%)

Query: 14  LRFCHCSQFLSPTPISSFHVPCSLKNPT-PSAISCKNRIFSP----VQASMASSTTVSDT 68
           L FCH ++   P+     H   S KNP   S I  K RI       V +SMA+      +
Sbjct: 18  LPFCHYTRQFRPS-----HFRSSDKNPNLVSIIRAKPRISHSLRCFVSSSMATPPPTQSS 72

Query: 69  DTKPFSVLFVCLGNICRSPAAEGVFTDLVKKKGLDSKFRIDSAGTIGYHEGNEADPRMRA 128
           +TKP+SVLFVCLGNICRSPAAEGVF D+VKK+GLDSKF IDSAGTI YHEGN ADPRMR+
Sbjct: 73  ETKPYSVLFVCLGNICRSPAAEGVFRDIVKKRGLDSKFNIDSAGTIDYHEGNMADPRMRS 132

Query: 129 ASKRRGIQITSISRPIKPSDFIDFDLILAMDKQNREDILEAFNRWRFRQTLPEDAHKK-- 186
           A+KRRGI+ITS+SRPIK SDF +FDLILAMD QN+EDIL+A+N W+ R   P DA KK  
Sbjct: 133 AAKRRGIEITSLSRPIKASDFREFDLILAMDDQNKEDILKAYNVWKARGNFPPDADKKVP 192

Query: 187 ---------------------VKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACD 225
                                VKLMCSYCKKH++  VPDPYYGG QGFEKVLDLLEDAC+
Sbjct: 193 LVCVCWTLELYLVDRFSLNFQVKLMCSYCKKHNDKFVPDPYYGGAQGFEKVLDLLEDACE 252

Query: 226 SLLENILAEN 235
           SLL++I A++
Sbjct: 253 SLLDSITAQS 262