Miyakogusa Predicted Gene

Lj3g3v2995700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2995700.1 tr|G7JIF2|G7JIF2_MEDTR Serine/threonine protein
phosphatase 2A activator OS=Medicago truncatula
GN=M,85.09,0,PTPA,Phosphotyrosyl phosphatase activator, PTPA;
seg,NULL; PTPA-like,NULL; SERINE/THREONINE-PROTEIN ,CUFF.45109.1
         (388 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G08960.1 | Symbols:  | phosphotyrosyl phosphatase activator (...   538   e-153

>AT4G08960.1 | Symbols:  | phosphotyrosyl phosphatase activator
           (PTPA) family protein | chr4:5746326-5747994 FORWARD
           LENGTH=392
          Length = 392

 Score =  538 bits (1385), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 247/335 (73%), Positives = 288/335 (85%), Gaps = 1/335 (0%)

Query: 54  TYRPIRAPAVPPDPHSQRAIILAPVPQPQHVTIASPPFHFQTPIKRITTPDDTRHFLDSD 113
            YRPIRAPA+   PH+ +AIIL+PVP  + V + SPP+HFQ+P+KRI +PDD R F +S 
Sbjct: 58  NYRPIRAPAIN-LPHNSQAIILSPVPHAEQVPVVSPPYHFQSPVKRIHSPDDIRRFHESA 116

Query: 114 SGNNFLGFVAALSQSVRGRKISDPCHLSDPVNAVVQAIETLSLWVDEIPPVQQAARYGNV 173
           S  NFLGFV +LS+S+RG KISDPCH+S  V A+V  +ETL  W+DEIPP QQ+ARYGNV
Sbjct: 117 SCKNFLGFVVSLSESIRGFKISDPCHISPTVAAIVSILETLLQWIDEIPPAQQSARYGNV 176

Query: 174 AYRTWHERMENSGESLMHRILPEELRAATVELVPYFADGFGNSSRIDYGTGHETNFAAWL 233
           ++R+WHER+   GESL+   LPEE + + +E+VPYF D FGNSSRIDYGTGHETNFAAWL
Sbjct: 177 SFRSWHERLRERGESLILEFLPEEFKESVIEIVPYFFDSFGNSSRIDYGTGHETNFAAWL 236

Query: 234 YCLARLGVIKEEDYQAVVIRVFVKYLDLMRKLQLVYCLEPAGSHGVWGLDDYHFLPFIFG 293
           YCLAR+G++KEEDY ++V RVFVKYL+LMRKLQ+VYCLEPAGSHGVWGLDDYHFLPFIFG
Sbjct: 237 YCLARMGIVKEEDYHSLVARVFVKYLELMRKLQMVYCLEPAGSHGVWGLDDYHFLPFIFG 296

Query: 294 SSQLIDHKYMKPKSIHNQDILDNFSHEYLYLGCISFIKKVKKGHFAEHSPMLDDISGVPN 353
           SSQLIDHKYMKPKSIHN DIL+NFS EY+YL CI+F+KKVKKG FAEHSP+LDDISGVPN
Sbjct: 297 SSQLIDHKYMKPKSIHNDDILENFSSEYMYLSCIAFVKKVKKGLFAEHSPLLDDISGVPN 356

Query: 354 WNKVNSGLLKMYRAEVLEKVPIMQHFLFGSLIKWD 388
           W KVNSGLLKMYR EVLEKVPIMQHFLFG LIKW+
Sbjct: 357 WKKVNSGLLKMYRVEVLEKVPIMQHFLFGWLIKWE 391