Miyakogusa Predicted Gene

Lj3g3v2995650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2995650.1 tr|A9SGX3|A9SGX3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233379,34.59,0.0000000000003,Glyco_transf_29,Glycosyl
transferase, family 29; seg,NULL; PREDICTED: SIMILAR TO
ALPHA-N-ACETYLGALAC,CUFF.45102.1
         (427 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08280.1 | Symbols:  | Glycosyltransferase family 29 (sialylt...   421   e-118
AT3G48820.1 | Symbols:  | Glycosyltransferase family 29 (sialylt...    56   5e-08
AT3G48820.2 | Symbols:  | Glycosyltransferase family 29 (sialylt...    56   5e-08

>AT1G08280.1 | Symbols:  | Glycosyltransferase family 29
           (sialyltransferase) family protein |
           chr1:2608408-2609604 FORWARD LENGTH=398
          Length = 398

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/401 (52%), Positives = 264/401 (65%), Gaps = 15/401 (3%)

Query: 39  MKRTVRPXXXXXXXXXXIATLTSRAVVGRRLLSIELETRVINHN----PPPQLNTTLLHH 94
           MKR+VRP           ATL  R  + R   S       +  +         N TLL  
Sbjct: 1   MKRSVRPLFSALLFAFFAATLICRVAIRRSSFSFASAIAELGSSGLMTEDIVFNETLLEF 60

Query: 95  AAVEIGEAKLRQEIQQLLDGNFGSQARHRTFVSW-------RRFIHHDVDNRNGLPANLR 147
           AA++ GE   +QE+  + D +   ++  R F S        +R +  D+ + +  P  LR
Sbjct: 61  AAIDPGEPNFKQEVDLISDYDHTRRSHRRHFSSMSIRPSEQQRRVSRDIASSSKFPVTLR 120

Query: 148 SPLFYRYWLDFRRVLHDWSRKRRFQPGIMSELTRSVKIPLDRYNNAAAAAGSGEKRYSSC 207
           S   YRYW +F+R L  W+R+R ++P IM +L R VK P+D +N   + +    +RY SC
Sbjct: 121 SSQAYRYWSEFKRNLRLWARRRAYEPNIMLDLIRLVKNPIDVHNGVVSISS---ERYLSC 177

Query: 208 AVVGNSGILLNSNHGSLIDAHEVVMRLNNARVENYEYKVGKKTSISFVNSNILHLCARRA 267
           AVVGNSG LLNS +G LID HE+V+RLNNA+ E +E KVG KT+ISF+NSNILH C RR 
Sbjct: 178 AVVGNSGTLLNSQYGDLIDKHEIVIRLNNAKTERFEKKVGSKTNISFINSNILHQCGRRE 237

Query: 268 GCFCHPYGPNVPIVMYICQAMHFLDYTVCNGSHRAPLLVTDPQFDVLCARIVKYYSLKRF 327
            C+CHPYG  VPIVMYICQ +H LDYT+C  SHRAPLL+TDP+FDV+CARIVKYYS+K+F
Sbjct: 238 SCYCHPYGETVPIVMYICQPIHVLDYTLCKPSHRAPLLITDPRFDVMCARIVKYYSVKKF 297

Query: 328 V-EGTGKGLEQWGSAHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSNSAKHHYHTNQK 386
           + E   KG   W   H+G+LFHYSSGMQAVMLA+GIC++VS+FGFGK NS KHHYHTNQK
Sbjct: 298 LEEKKAKGFVDWSKDHEGSLFHYSSGMQAVMLAVGICEKVSVFGFGKLNSTKHHYHTNQK 357

Query: 387 VELHLHDYEAEYEFYRDLVDGNKPIPFLSDKFKIPPVVMYH 427
            EL LHDYEAEY  YRDL +  + IPFL  +FKIP V +YH
Sbjct: 358 AELKLHDYEAEYRLYRDLENSPRAIPFLPKEFKIPLVQVYH 398


>AT3G48820.1 | Symbols:  | Glycosyltransferase family 29
           (sialyltransferase) family protein |
           chr3:18100106-18102852 REVERSE LENGTH=440
          Length = 440

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 36/170 (21%)

Query: 202 KRYSSCAVVGNSGILLNSNHGSLIDAHEVVMRLNNARVENYEYKVGKKTSISFVNSNILH 261
           +++  CAV+GNSG LL +  G  ID ++ V+R N A ++NY+  VG+K++   +N     
Sbjct: 170 RQFGRCAVIGNSGDLLKTKFGKEIDTYDTVLRENGAPIQNYKEYVGEKSTFRLLNRG--- 226

Query: 262 LCARRAGCFCHPYGPNVPIVMYICQAMHFLDYTVCNGSHRAPLLVTDPQFDVLCARIVKY 321
                                    +   LD  V     +  +L+       +  ++++ 
Sbjct: 227 -------------------------SAKALDKVVELDEKKQEVLLVKTTIHDIMNKMIRE 261

Query: 322 YSLKRFVEGTGKGLEQWGSAHDGALFHYSSGMQAVMLALGICDRVSIFGF 371
             +K  V         +GSA  G      +G++A+  AL  CD V ++GF
Sbjct: 262 VPIKNPVYLMLGA--SFGSAAKG------TGLKALEFALSTCDSVDMYGF 303


>AT3G48820.2 | Symbols:  | Glycosyltransferase family 29
           (sialyltransferase) family protein |
           chr3:18100106-18102852 REVERSE LENGTH=431
          Length = 431

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 36/170 (21%)

Query: 202 KRYSSCAVVGNSGILLNSNHGSLIDAHEVVMRLNNARVENYEYKVGKKTSISFVNSNILH 261
           +++  CAV+GNSG LL +  G  ID ++ V+R N A ++NY+  VG+K++   +N     
Sbjct: 161 RQFGRCAVIGNSGDLLKTKFGKEIDTYDTVLRENGAPIQNYKEYVGEKSTFRLLNRG--- 217

Query: 262 LCARRAGCFCHPYGPNVPIVMYICQAMHFLDYTVCNGSHRAPLLVTDPQFDVLCARIVKY 321
                                    +   LD  V     +  +L+       +  ++++ 
Sbjct: 218 -------------------------SAKALDKVVELDEKKQEVLLVKTTIHDIMNKMIRE 252

Query: 322 YSLKRFVEGTGKGLEQWGSAHDGALFHYSSGMQAVMLALGICDRVSIFGF 371
             +K  V         +GSA  G      +G++A+  AL  CD V ++GF
Sbjct: 253 VPIKNPVYLMLGA--SFGSAAKG------TGLKALEFALSTCDSVDMYGF 294