Miyakogusa Predicted Gene

Lj3g3v2995620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2995620.1 Non Chatacterized Hit- tr|I3SQX6|I3SQX6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,64.86,2e-17,seg,NULL,CUFF.45099.1
         (282 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G44716.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    59   3e-09
AT3G44716.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    55   4e-08

>AT3G44716.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; Has 30201 Blast hits to 17322 proteins in 780
           species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
           Fungi - 3422; Plants - 5037; Viruses - 0; Other
           Eukaryotes - 2996 (source: NCBI BLink). |
           chr3:16263230-16264038 FORWARD LENGTH=134
          Length = 134

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 3/59 (5%)

Query: 207 RYKVGMRITFDIPASDICKGCENSNGSCGAGLKCLCHPKECTDKVIS-KTGSIKLTGGV 264
           R +V M +   IP  D+C  CE   G+CG  L+CLCHPKEC +KVI+  T S  L+GG+
Sbjct: 72  RARVSMEVEGHIP--DLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSGGI 128


>AT3G44716.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; Has 13 Blast hits to 13 proteins in 6 species:
           Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants
           - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
           BLink). | chr3:16263230-16263751 FORWARD LENGTH=145
          Length = 145

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 207 RYKVGMRITFDIPASDICKGCENSNGSCGAGLKCLCHPKECTDKVIS-KTGSIKLTG 262
           R +V M +   IP  D+C  CE   G+CG  L+CLCHPKEC +KVI+  T S  L+G
Sbjct: 72  RARVSMEVEGHIP--DLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSG 126