Miyakogusa Predicted Gene

Lj3g3v2993440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2993440.1 Non Chatacterized Hit- tr|I1LRH3|I1LRH3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3853
PE=,93.84,0,vWA-like,NULL; Helical domain of Sec23/24,Sec23/Sec24,
helical domain; beta-sandwich domain of Sec23,CUFF.45086.1
         (647 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27460.1 | Symbols:  | sec23/sec24 transport family protein |...  1059   0.0  
AT3G07100.1 | Symbols: ERMO2, SEC24A | Sec23/Sec24 protein trans...    83   5e-16
AT2G21630.1 | Symbols:  | Sec23/Sec24 protein transport family p...    68   2e-11
AT3G44340.1 | Symbols: CEF | clone eighty-four | chr3:16011923-1...    63   7e-10
AT3G44340.2 | Symbols: CEF | clone eighty-four | chr3:16012084-1...    63   8e-10
AT4G32640.2 | Symbols:  | Sec23/Sec24 protein transport family p...    58   2e-08
AT4G32640.1 | Symbols:  | Sec23/Sec24 protein transport family p...    58   2e-08

>AT2G27460.1 | Symbols:  | sec23/sec24 transport family protein |
           chr2:11740670-11744867 FORWARD LENGTH=745
          Length = 745

 Score = 1059 bits (2739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/648 (80%), Positives = 581/648 (89%), Gaps = 2/648 (0%)

Query: 1   MMSSFVDLELPAGESDEDAALQACPVYVAAVDLSSSEEFLELTKSALLAALEAIPPGSLF 60
           M SSF+DLE+P   S+E+   QA PVYVAA+D+SSSEEFLELTKSALLAALEA+ PG+LF
Sbjct: 99  MTSSFIDLEMPLDGSEEEMT-QARPVYVAAIDISSSEEFLELTKSALLAALEALSPGALF 157

Query: 61  GLATFSYKLGLYDVQGPIPVVKNVFIPPDAEGTLQIELEDVMPLLQFLAPVGTCKDRIAS 120
           GL TFS+K+GLYDVQGPIPVVKNVFIPPD E +L +ELEDVMPLLQFLAPV TCKDRIA+
Sbjct: 158 GLVTFSHKIGLYDVQGPIPVVKNVFIPPDGESSLSLELEDVMPLLQFLAPVETCKDRIAA 217

Query: 121 ALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVAMEALCSYLGSEYGNTFALARIFAFLS 180
           ALETLRP TSWER+  AGQG+D VL+GGRGFG AMEAL +YLGSE+GNTFALAR+FAFLS
Sbjct: 218 ALETLRPITSWERSAGAGQGMDSVLMGGRGFGTAMEALFNYLGSEFGNTFALARVFAFLS 277

Query: 181 GPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNE 240
           GPPDYG GQLDT RYGEQYASK  DADRALLPEQTPFYKDLA +AVQ+GVCVD+FAVTNE
Sbjct: 278 GPPDYGRGQLDTSRYGEQYASKRVDADRALLPEQTPFYKDLATIAVQSGVCVDLFAVTNE 337

Query: 241 YTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNS 300
           YTDLASLKFLSIESGGSLFLY+ST+DSTLPQDM+RML+RPYAF CVLRLRTSTEFKPGNS
Sbjct: 338 YTDLASLKFLSIESGGSLFLYSSTDDSTLPQDMFRMLNRPYAFNCVLRLRTSTEFKPGNS 397

Query: 301 YGHFFPDPQYENVQHIICCDSYATYAYDFVFENNIGFSRNKADAPTLQIAFQYAVVVPPQ 360
           +GHFFPDPQYEN+QHIICCDSYATYAYDF F +N GFSR+  + P +QIAFQY VVVPP+
Sbjct: 398 FGHFFPDPQYENLQHIICCDSYATYAYDFEFADNTGFSRHSGEQPVVQIAFQYTVVVPPE 457

Query: 361 ELSNSEGVSTSRTKHSLQRRLRIRTLQFGVAKNIHELYDSCDSEVVLSLLVHKVILASLE 420
            LSNSE  S+SR KH+LQRRLRIRT+QFG A NI+E+YDS D EVVLSLLVHKVILASLE
Sbjct: 458 GLSNSEMSSSSRGKHTLQRRLRIRTMQFGTAHNINEIYDSVDHEVVLSLLVHKVILASLE 517

Query: 421 EGVREGRILLQEWLVILAAQYNDAYKLVQYTN-ESSIRSQLDVAFSQCPQLQPLPRLIFA 479
           +GVREGR LL +WLVIL AQYNDA+ LVQY N   S+ SQ+D+ FSQCPQL+PLPRL+FA
Sbjct: 518 DGVREGRALLHDWLVILTAQYNDAFNLVQYKNGNKSMSSQIDITFSQCPQLEPLPRLVFA 577

Query: 480 LLRNPLLRFHEEGVHPDYRIYLQCLFSVLEPSSLHRAVYPVLTSYATPDQQAYPRHSLSR 539
           LLRNPLLRFHEEGVHPDYRIYLQCLFSVL+PSSLH  +YP L SY+TPD  AYPRHSLSR
Sbjct: 578 LLRNPLLRFHEEGVHPDYRIYLQCLFSVLDPSSLHCGIYPALMSYSTPDTLAYPRHSLSR 637

Query: 540 AALITSGSPIFFLDAFTVLIVFYSSTADPTLPFPPPHDCLLRTTINKLKQERCITPKLIF 599
           AALITSGSPIFFLDA+T LIVFYSSTADP++PFPPP DCLLR TINK+KQER ITPKL+F
Sbjct: 638 AALITSGSPIFFLDAYTTLIVFYSSTADPSIPFPPPQDCLLRQTINKVKQERSITPKLVF 697

Query: 600 IRGGHDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK 647
           IRGG DDA++FEN+LIEEQDVDG+G  S MGFVSFL+DI+Q+V E+MK
Sbjct: 698 IRGGRDDATVFENYLIEEQDVDGNGFASAMGFVSFLDDISQRVTEYMK 745


>AT3G07100.1 | Symbols: ERMO2, SEC24A | Sec23/Sec24 protein
           transport family protein | chr3:2245689-2250077 REVERSE
           LENGTH=1038
          Length = 1038

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 31/279 (11%)

Query: 173 ARIFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCV 232
            ++  F +  P  GAG+L  R  G+     G D + AL   + PFYK +AA   +  + +
Sbjct: 574 GKLLIFQNSLPSLGAGRLKLR--GDDPRVYGTDKEYALRVAEDPFYKQMAADCTKFQIGI 631

Query: 233 DIFAVTNEYTDLASLKFLSIESGGSLFLY----TSTEDSTLPQDMYRMLSRPYAFGCVLR 288
           +++A +++YTD+ASL  L+  +GG ++ Y    +S     L  ++ R L+R  A+  V+R
Sbjct: 632 NVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHELARDLTRETAWEAVMR 691

Query: 289 LRTSTEFKPGNSYGHFFPDPQYENVQHIICCDSYATYAYDFVFENNIGFSRNKADAPTLQ 348
           +R     +  + +G+F    +  ++  +   D    YA     E  +  S+         
Sbjct: 692 IRCGKGIRFSSYHGNFM--LRSTDLLALPAVDCDKAYAMQLSLEETLLTSQT-------- 741

Query: 349 IAFQYAVVVPPQELSNSEGVSTSRTKHSLQRRLRIRTLQFGVAKNIHELYDSCDSEVVLS 408
           + FQ A++                T    +RR+R+ T    V  ++ E+Y   D+  ++S
Sbjct: 742 VYFQVALLY---------------TASCGERRIRVHTSVAPVVTDLGEMYRQADTGSIVS 786

Query: 409 LLVHKVILASLEEGVREGRILLQEWLVILAAQYNDAYKL 447
           L     I  SL   + + R  +Q+ +V    +Y + + +
Sbjct: 787 LYARLAIEKSLSAKLDDARNAIQQKIVKALKEYRNLHAV 825


>AT2G21630.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr2:9250346-9253829 FORWARD LENGTH=761
          Length = 761

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 117/277 (42%), Gaps = 37/277 (13%)

Query: 25  PVYVAAVDLSSSEEFLELTKSALLAALEAIPPGSLFGLATFSYKLGLYDVQGPIPVVKNV 84
           PV++  VD     E L+  KS+L  AL+ +P  S+ GL TF   + +Y++  P    K+ 
Sbjct: 127 PVFLFVVDTCLISEELDFLKSSLFQALDLLPDTSILGLITFDSLVRVYELGFP-HCTKSY 185

Query: 85  FIPPDAEGT-------LQIELEDVMP----------------LLQFLAPVGTCKDRIASA 121
           F   + + T       L   +++  P                + +FL P   C   + S 
Sbjct: 186 FFHGNKDCTKDQLLDQLSFFVKNPKPSSGVIAGARDGLSSDDIARFLLPASDCHFTLHSV 245

Query: 122 LETLRPTTSWERTTAAGQGLDGVLIGGRGFGVAMEALCSYLGSEYGNTFALARIFAFLSG 181
           LE L   + W    AA           R  GVA+    S LG+ +  +   ARI AF+ G
Sbjct: 246 LEELG-NSPWP--VAADHR------PARCTGVALRIAASLLGACFPGS--AARIMAFIGG 294

Query: 182 PPDYGAGQLDTRRYGEQYAS-KGEDADRALLPEQ-TPFYKDLAAVAVQAGVCVDIFAVTN 239
           P   G G + +R   +   S K  D D A+   +   FY+ LA   V  G  +D+FA + 
Sbjct: 295 PSTQGPGAIVSRELSDPIRSHKDIDKDSAMYYHKAVEFYEMLAKQLVHQGHVLDVFASSV 354

Query: 240 EYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRM 276
           +   +A LK    ++GG + L  S   S     + R+
Sbjct: 355 DQVGIAELKVAVEQTGGFVVLAESFGHSVFRDSLKRV 391


>AT3G44340.1 | Symbols: CEF | clone eighty-four |
           chr3:16011923-16019873 REVERSE LENGTH=1096
          Length = 1096

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 48/275 (17%)

Query: 45  SALLAALEAIP--PGSLFGLATFSYKLGLYDV----QGP----IPVVKNVFIPPDAEGTL 94
           SA+   L  +P  P +  G+ATF   +  Y++    Q P    +P V++V+ P + +  +
Sbjct: 531 SAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIV 590

Query: 95  QIELEDVMPLLQFLAPVGTCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVA 154
           Q+                 C+  +   LE++ PT   E  +               FG A
Sbjct: 591 QLS---------------ECRQHLEILLESI-PTMFQESKSPES-----------AFGAA 623

Query: 155 MEALCSYLGSEYGNTFALARIFAFLSGPPDYGAGQLDTRRY-GEQYASKGEDADRALLPE 213
           ++A    + S  G      ++  F S  P  G G L +R   G   AS GE     LL  
Sbjct: 624 VKAAFLAMKSTGG------KLMVFQSVLPSVGIGALSSREADGRANASAGEKEAHKLLQP 677

Query: 214 QTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTS----TEDSTL 269
                + +A    +  VCVD+F  T  Y D+AS+  +   +GG ++ Y      ++   L
Sbjct: 678 ADKTLRTMAIEFAEYQVCVDLFITTQAYVDMASISEIPRTTGGQVYCYYPFSALSDPPKL 737

Query: 270 PQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHF 304
             D+   ++RP  F  V+R+R S   +     G+F
Sbjct: 738 YNDLRWNITRPQGFEAVMRVRCSQGIQVQEYSGNF 772


>AT3G44340.2 | Symbols: CEF | clone eighty-four |
           chr3:16012084-16019873 REVERSE LENGTH=1069
          Length = 1069

 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 48/275 (17%)

Query: 45  SALLAALEAIP--PGSLFGLATFSYKLGLYDV----QGP----IPVVKNVFIPPDAEGTL 94
           SA+   L  +P  P +  G+ATF   +  Y++    Q P    +P V++V+ P + +  +
Sbjct: 531 SAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIV 590

Query: 95  QIELEDVMPLLQFLAPVGTCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVA 154
           Q+                 C+  +   LE++ PT   E  +               FG A
Sbjct: 591 QLS---------------ECRQHLEILLESI-PTMFQESKSPES-----------AFGAA 623

Query: 155 MEALCSYLGSEYGNTFALARIFAFLSGPPDYGAGQLDTRRY-GEQYASKGEDADRALLPE 213
           ++A    + S  G      ++  F S  P  G G L +R   G   AS GE     LL  
Sbjct: 624 VKAAFLAMKSTGG------KLMVFQSVLPSVGIGALSSREADGRANASAGEKEAHKLLQP 677

Query: 214 QTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTS----TEDSTL 269
                + +A    +  VCVD+F  T  Y D+AS+  +   +GG ++ Y      ++   L
Sbjct: 678 ADKTLRTMAIEFAEYQVCVDLFITTQAYVDMASISEIPRTTGGQVYCYYPFSALSDPPKL 737

Query: 270 PQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHF 304
             D+   ++RP  F  V+R+R S   +     G+F
Sbjct: 738 YNDLRWNITRPQGFEAVMRVRCSQGIQVQEYSGNF 772


>AT4G32640.2 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:15742661-15750424 FORWARD LENGTH=1080
          Length = 1080

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 48/275 (17%)

Query: 45  SALLAALEAIP--PGSLFGLATFSYKLGLYDV----QGP----IPVVKNVFIPPDAEGTL 94
           +A+   L  +P  P +  G+ATF   +  Y++    Q P    +P V++V+ P + +  +
Sbjct: 528 NAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVVV 587

Query: 95  QIELEDVMPLLQFLAPVGTCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVA 154
           Q+                 C+  +   L+++ PT   E             I    FG A
Sbjct: 588 QLS---------------ECRQHLELLLDSI-PTMFQESK-----------IPESAFGAA 620

Query: 155 MEALCSYLGSEYGNTFALARIFAFLSGPPDYGAGQLDTRRY-GEQYASKGEDADRALLPE 213
           ++A    + S+ G       I   +      G G L +R   G    S GE     LL  
Sbjct: 621 VKAAFLAMKSKGGKLMVFQSILCSV------GVGALSSREAEGRANMSAGEKEAHKLLQP 674

Query: 214 QTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTS----TEDSTL 269
                K +A    +  VCVDIF  T  Y D+AS+  +   +GG ++ Y      ++   L
Sbjct: 675 ADKTLKTMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYYPFSALSDPPKL 734

Query: 270 PQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHF 304
             D+   ++RP  F  V+R+R S   +     G+F
Sbjct: 735 YNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNF 769


>AT4G32640.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:15742661-15750424 FORWARD LENGTH=1080
          Length = 1080

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 48/275 (17%)

Query: 45  SALLAALEAIP--PGSLFGLATFSYKLGLYDV----QGP----IPVVKNVFIPPDAEGTL 94
           +A+   L  +P  P +  G+ATF   +  Y++    Q P    +P V++V+ P + +  +
Sbjct: 528 NAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVVV 587

Query: 95  QIELEDVMPLLQFLAPVGTCKDRIASALETLRPTTSWERTTAAGQGLDGVLIGGRGFGVA 154
           Q+                 C+  +   L+++ PT   E             I    FG A
Sbjct: 588 QLS---------------ECRQHLELLLDSI-PTMFQESK-----------IPESAFGAA 620

Query: 155 MEALCSYLGSEYGNTFALARIFAFLSGPPDYGAGQLDTRRY-GEQYASKGEDADRALLPE 213
           ++A    + S+ G       I   +      G G L +R   G    S GE     LL  
Sbjct: 621 VKAAFLAMKSKGGKLMVFQSILCSV------GVGALSSREAEGRANMSAGEKEAHKLLQP 674

Query: 214 QTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTS----TEDSTL 269
                K +A    +  VCVDIF  T  Y D+AS+  +   +GG ++ Y      ++   L
Sbjct: 675 ADKTLKTMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYYPFSALSDPPKL 734

Query: 270 PQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHF 304
             D+   ++RP  F  V+R+R S   +     G+F
Sbjct: 735 YNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNF 769