Miyakogusa Predicted Gene

Lj3g3v2993420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2993420.1 Non Chatacterized Hit- tr|I1LKQ8|I1LKQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35313 PE,73,0,GTPase
activation domain, GAP,Rho GTPase activation protein; P21-Rho-binding
domain,PAK-box/P21-Rho-,CUFF.45084.1
         (489 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22400.1 | Symbols:  | Rho GTPase activating protein with PAK...   471   e-133
AT3G11490.1 | Symbols:  | rac GTPase activating protein | chr3:3...   417   e-117
AT2G46710.1 | Symbols:  | Rho GTPase activating protein with PAK...   379   e-105
AT4G03100.1 | Symbols:  | Rho GTPase activating protein with PAK...   378   e-105
AT1G08340.1 | Symbols:  | Rho GTPase activating protein with PAK...   366   e-101
AT5G61530.1 | Symbols:  | small G protein family protein / RhoGA...    51   2e-06
AT5G61530.3 | Symbols:  | small G protein family protein / RhoGA...    51   2e-06

>AT5G22400.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr5:7423050-7425335
           REVERSE LENGTH=466
          Length = 466

 Score =  471 bits (1212), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/407 (63%), Positives = 298/407 (73%), Gaps = 29/407 (7%)

Query: 85  ELSLLAILVTLLRKSLVACKSEGRELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEP 144
           ++SLLA+LV + R+SL++CKS  RELC+MEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEP
Sbjct: 87  QISLLALLVAIFRRSLISCKSNRRELCSMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEP 146

Query: 145 EVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINAD 204
           EVP R PSASATVFGVSTESMQLSYD+RGN VPTILL MQ  LY+QGGLQAEGIFR+ A+
Sbjct: 147 EVPRRAPSASATVFGVSTESMQLSYDSRGNCVPTILLLMQNCLYSQGGLQAEGIFRLTAE 206

Query: 205 NTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEEDCAE 264
           N++EE VR+Q+NRG IPE IDVHCLAGLIKAWFRELPT +LDSLSPE VMQCQ EE+  E
Sbjct: 207 NSEEEAVREQLNRGFIPERIDVHCLAGLIKAWFRELPTSVLDSLSPEQVMQCQTEEENVE 266

Query: 265 LARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMADPLTALMYAVQ 324
           L R LP TEA+LLDWAINLMADVVQ EHL+KMN+ NIAMVFAPNMTQM DPLTALMYAVQ
Sbjct: 267 LVRLLPPTEAALLDWAINLMADVVQYEHLNKMNSRNIAMVFAPNMTQMDDPLTALMYAVQ 326

Query: 325 VMNFLKTLILRTLQRRKDSVVEPSPRFDLEPSDENGEDQSPLGSYQQDVAXXXXXXXXXX 384
           VMNFLKTLI +TL+ R+DSVVE +  F LEPSDE+G  QSP     Q +A          
Sbjct: 327 VMNFLKTLIEKTLRERQDSVVEQAHAFPLEPSDESGH-QSP----SQSLAFN-------- 373

Query: 385 XXXKAVSECSPEPFQNKDSTEGEPESLMSSSEIL--VCEEDLYCQFPPKGNVGMSKTGQS 442
                 SE S E     D+ E   E+  SSSEI   +  E+  C+   + + G  +TG+ 
Sbjct: 374 -----TSEQSEE--TQSDNIEN-AENQSSSSEISDELTLENNACE-QRETDFGKYRTGRL 424

Query: 443 SSSIAKKGFKKTRGQQPMIHGTVAVEKKGISNLSLIDSISERIEAWR 489
           S S  +         Q  +  T     KG++NLS + S  ER EAWR
Sbjct: 425 SDSSQQVVLNLDPPAQWPVGRT-----KGLTNLSRVGSRVERTEAWR 466


>AT3G11490.1 | Symbols:  | rac GTPase activating protein |
           chr3:3617523-3619567 REVERSE LENGTH=435
          Length = 435

 Score =  417 bits (1073), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/278 (71%), Positives = 234/278 (84%)

Query: 87  SLLAILVTLLRKSLVACKSEGRELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEV 146
           S L ILV+ +R+S++       +LC+MEIG PT+VRHVAHVTFDRF+GFLGLPVEFEPEV
Sbjct: 65  SALEILVSAIRRSVIGGCVGEEDLCSMEIGVPTDVRHVAHVTFDRFHGFLGLPVEFEPEV 124

Query: 147 PTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINADNT 206
           P R PSASATVFGVSTESMQLSYDTRGN VPTILL MQ HLY++GGL+ EGIFRIN +N 
Sbjct: 125 PRRAPSASATVFGVSTESMQLSYDTRGNIVPTILLMMQSHLYSRGGLRVEGIFRINGENG 184

Query: 207 QEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEEDCAELA 266
           QEEY+R+++N+G+IP+ IDVHCLA LIKAWFRELP+G+LDSLSPE VM+ ++E++C EL 
Sbjct: 185 QEEYIREELNKGIIPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMESESEDECVELV 244

Query: 267 RQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMADPLTALMYAVQVM 326
           R LP TEASLLDWAINLMADVV+ E L+KMNA NIAMVFAPNMTQM DPLTALMYAVQVM
Sbjct: 245 RLLPSTEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLDPLTALMYAVQVM 304

Query: 327 NFLKTLILRTLQRRKDSVVEPSPRFDLEPSDENGEDQS 364
           NFLKTLI++TL+ RK+S  +  P  +  P D NG+  S
Sbjct: 305 NFLKTLIVKTLKDRKESRDKLVPASNPSPRDHNGDQSS 342


>AT2G46710.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr2:19192105-19194656
           FORWARD LENGTH=455
          Length = 455

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/263 (68%), Positives = 217/263 (82%), Gaps = 4/263 (1%)

Query: 85  ELSLLAILVTLLRKSLV-ACKSEGRE---LCAMEIGWPTNVRHVAHVTFDRFNGFLGLPV 140
           +L+++ +L  +LRKSLV +C  E  E   + +M+IGWPT V+HV+HVTFDRFNGFLGLP 
Sbjct: 71  QLTVVDLLAAVLRKSLVMSCAMERGEDDVVASMDIGWPTEVKHVSHVTFDRFNGFLGLPS 130

Query: 141 EFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFR 200
           E EPEVP R PSAS +VFGVS +SMQ SYD RGNSVPTILL+MQ+ LY +GGL+AEGIFR
Sbjct: 131 ELEPEVPPRAPSASVSVFGVSAKSMQCSYDDRGNSVPTILLRMQKRLYTEGGLKAEGIFR 190

Query: 201 INADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEE 260
           IN DN +EE+VR Q+N GV+P GIDVHCLAGLIKAWFRELPTG+LD L+PE VM+C  EE
Sbjct: 191 INPDNGKEEHVRRQLNCGVVPRGIDVHCLAGLIKAWFRELPTGVLDVLTPEQVMRCNTEE 250

Query: 261 DCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMADPLTALM 320
           DC+ L   LP  E+++LDWAI LMADVV+ E  +KMNA N+AMVFAPNMTQMADPLTAL+
Sbjct: 251 DCSRLVILLPPVESAILDWAIGLMADVVEHEQFNKMNARNVAMVFAPNMTQMADPLTALI 310

Query: 321 YAVQVMNFLKTLILRTLQRRKDS 343
           +AVQVMNFLKTLIL  L+ R+++
Sbjct: 311 HAVQVMNFLKTLILMNLKERENA 333


>AT4G03100.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr4:1374361-1375913
           FORWARD LENGTH=430
          Length = 430

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/270 (65%), Positives = 217/270 (80%), Gaps = 12/270 (4%)

Query: 86  LSLLAILVTLLRKSLVACKSEGRE------------LCAMEIGWPTNVRHVAHVTFDRFN 133
           LSL+  L+T LRKS+V+C+ + R+            +  MEIGWPTNVRH+ HVTFDRF+
Sbjct: 39  LSLVEFLLTALRKSVVSCRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHITHVTFDRFH 98

Query: 134 GFLGLPVEFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGL 193
           GFLGLP E + E+P R PSAS +VFGVS ESMQ SYD +GNSVPTILL MQ  LY+Q GL
Sbjct: 99  GFLGLPHELQVEIPCRVPSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQGL 158

Query: 194 QAEGIFRINADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHV 253
           +AEGIFRIN +N+QEE+VRDQ+NRG++PE IDVHCLAGLIKAWFRELP+G+LD LSPE V
Sbjct: 159 KAEGIFRINPENSQEEHVRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEV 218

Query: 254 MQCQNEEDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMA 313
           + C  E++  EL +QL  TE++LL+WA++LMADVV+EE  +KMNA NIAMVFAPNMTQM 
Sbjct: 219 LNCNTEDESVELIKQLKPTESALLNWAVDLMADVVEEEESNKMNARNIAMVFAPNMTQMT 278

Query: 314 DPLTALMYAVQVMNFLKTLILRTLQRRKDS 343
           DPLTALM+AVQVMN LKTLI +TL  R+++
Sbjct: 279 DPLTALMHAVQVMNLLKTLITKTLAEREEN 308


>AT1G08340.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr1:2631308-2632669
           FORWARD LENGTH=331
          Length = 331

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 165/231 (71%), Positives = 201/231 (87%)

Query: 113 MEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPTRPPSASATVFGVSTESMQLSYDTR 172
           M+IG PTN+RHVAHVTFDRF+GFLGLP EFEP+VP + PSASATVFGVSTESMQLSYD+R
Sbjct: 1   MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60

Query: 173 GNSVPTILLQMQRHLYAQGGLQAEGIFRINADNTQEEYVRDQINRGVIPEGIDVHCLAGL 232
           GN VP ILL +Q  LY QGGLQAEG+FRI  +N++EE+VR+Q+N+G+IP+GIDVHCLAGL
Sbjct: 61  GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120

Query: 233 IKAWFRELPTGILDSLSPEHVMQCQNEEDCAELARQLPHTEASLLDWAINLMADVVQEEH 292
           IKAWFRELP G+LD L  E VMQC+++ED  ++ R LP TEASLL+WAINLMADV+Q EH
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180

Query: 293 LSKMNAHNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLQRRKDS 343
           ++KMN+ N+A+VFAPNM+QMADPLTALMYAVQVM  LK+L  +T++ R+ S
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREAS 231


>AT5G61530.1 | Symbols:  | small G protein family protein / RhoGAP
           family protein | chr5:24742630-24744586 FORWARD
           LENGTH=376
          Length = 376

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 24/168 (14%)

Query: 153 ASATVFGVSTE-SMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINADNT---QE 208
           AS+ VFGV+ E ++Q    +R   +P IL++   +L   G L +  +F+   D     Q 
Sbjct: 132 ASSDVFGVAIEITVQRQESSR--PIPLILVKCADYLILTG-LNSPNLFKAEGDRKLIQQL 188

Query: 209 EYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPT---------GILDSLSPEHVMQCQNE 259
               +Q  R  IPEG++   +A L+K +   LPT          I D+ S  H M+    
Sbjct: 189 VSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSSIHRMR---- 244

Query: 260 EDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAP 307
               +  ++L +   + L++   L+  V Q+  L+KM++H++AM  AP
Sbjct: 245 ----QSLQKLSNVNYNTLEFITALLLRVSQKSLLNKMDSHSLAMEMAP 288


>AT5G61530.3 | Symbols:  | small G protein family protein / RhoGAP
           family protein | chr5:24742405-24744586 FORWARD
           LENGTH=376
          Length = 376

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 24/168 (14%)

Query: 153 ASATVFGVSTE-SMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINADNT---QE 208
           AS+ VFGV+ E ++Q    +R   +P IL++   +L   G L +  +F+   D     Q 
Sbjct: 132 ASSDVFGVAIEITVQRQESSR--PIPLILVKCADYLILTG-LNSPNLFKAEGDRKLIQQL 188

Query: 209 EYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPT---------GILDSLSPEHVMQCQNE 259
               +Q  R  IPEG++   +A L+K +   LPT          I D+ S  H M+    
Sbjct: 189 VSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSSIHRMR---- 244

Query: 260 EDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAP 307
               +  ++L +   + L++   L+  V Q+  L+KM++H++AM  AP
Sbjct: 245 ----QSLQKLSNVNYNTLEFITALLLRVSQKSLLNKMDSHSLAMEMAP 288