Miyakogusa Predicted Gene

Lj3g3v2991350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2991350.1 Non Chatacterized Hit- tr|J3LGH4|J3LGH4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G3,35.25,0.00000000005, ,gene.g50067.t1.1
         (252 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G12070.1 | Symbols:  | unknown protein; INVOLVED IN: biologic...    51   9e-07

>AT4G12070.1 | Symbols:  | unknown protein; INVOLVED IN:
           biological_process unknown; LOCATED IN: plasma membrane;
           EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
           growth stages; Has 30201 Blast hits to 17322 proteins in
           780 species: Archae - 12; Bacteria - 1396; Metazoa -
           17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
           Eukaryotes - 2996 (source: NCBI BLink). |
           chr4:7231941-7234272 FORWARD LENGTH=483
          Length = 483

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 10/100 (10%)

Query: 134 SKFGFKV----QGFMCISSVMTD-----SSADRAGLRELHEEASANGFLLVISRLEGKST 184
           +K GF +    +GF+ +SSV TD     + A R+GL  L+ EA+     LV+SR+  +  
Sbjct: 302 TKLGFSISRTEEGFIYVSSV-TDHEDESAPAARSGLSSLYREAAKASRRLVVSRVGNQKV 360

Query: 185 MPTSVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAW 224
           +P  V S+G + C D   +   L+        I LHV  W
Sbjct: 361 LPWMVSSTGAIRCYDTVSLSQKLSLHRHAKVHIGLHVFLW 400