Miyakogusa Predicted Gene

Lj3g3v2991330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2991330.1 Non Chatacterized Hit- tr|I1IA92|I1IA92_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,31.58,0.0000000000002,Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin; seg,NULL,CUFF.45082.1
         (172 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22430.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   126   6e-30
AT2G27385.3 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   122   2e-28
AT2G27385.2 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   122   2e-28
AT2G27385.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   122   2e-28

>AT5G22430.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr5:7433913-7434646 FORWARD LENGTH=172
          Length = 172

 Score =  126 bits (317), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 99/155 (63%), Gaps = 4/155 (2%)

Query: 19  IDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKTK 78
           ++ S   +V+GK+SC+DC ++ D S IKVL+KC+G KK   A    +G F+  LP+   K
Sbjct: 21  LELSASSLVSGKISCLDCHRDFDFSGIKVLLKCDGEKKQITAVAAADGSFRSVLPTADKK 80

Query: 79  PSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNS-YTISTPLSFMKSCPQNTNCKAA 137
            S   NCLAKL+GGP QLYA + N VS+++KS+  +   T S PL+F  SCP+ +     
Sbjct: 81  GSI--NCLAKLLGGPEQLYAHKHNLVSELVKSKHDSKVLTTSNPLAFSLSCPKPSRDDIG 138

Query: 138 KPVGSSKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172
             +G SKT++ P    +G  P+S++ PF+PIIGIP
Sbjct: 139 SMIGDSKTINFPGAGGFGFPPASFF-PFLPIIGIP 172


>AT2G27385.3 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr2:11716697-11717285 REVERSE
           LENGTH=162
          Length = 162

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 11/150 (7%)

Query: 23  TCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKTKPSSA 82
           +  +V GKVSC DC  ++D S I V V C         +T+  G F  +LPS        
Sbjct: 24  SASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFTVTTDKKGDFISELPSKI-----E 78

Query: 83  GNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFMKSCPQNTNCKAAKPVGS 142
            NC A+L G   QLYA++ N  S+I+K    + Y +S+ L F+KSCP++          S
Sbjct: 79  SNCEAELQGSVKQLYASKNNVKSKIVK-LGGDKYGLSSKLFFLKSCPRSFG-----SFSS 132

Query: 143 SKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172
           SKTVDLP+PPEWGLAP+SYYVPF+PIIGIP
Sbjct: 133 SKTVDLPVPPEWGLAPTSYYVPFLPIIGIP 162


>AT2G27385.2 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr2:11716697-11717285 REVERSE
           LENGTH=162
          Length = 162

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 11/150 (7%)

Query: 23  TCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKTKPSSA 82
           +  +V GKVSC DC  ++D S I V V C         +T+  G F  +LPS        
Sbjct: 24  SASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFTVTTDKKGDFISELPSKI-----E 78

Query: 83  GNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFMKSCPQNTNCKAAKPVGS 142
            NC A+L G   QLYA++ N  S+I+K    + Y +S+ L F+KSCP++          S
Sbjct: 79  SNCEAELQGSVKQLYASKNNVKSKIVK-LGGDKYGLSSKLFFLKSCPRSFG-----SFSS 132

Query: 143 SKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172
           SKTVDLP+PPEWGLAP+SYYVPF+PIIGIP
Sbjct: 133 SKTVDLPVPPEWGLAPTSYYVPFLPIIGIP 162


>AT2G27385.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr2:11716697-11717318 REVERSE
           LENGTH=173
          Length = 173

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 11/150 (7%)

Query: 23  TCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALASTEDNGFFKVDLPSDKTKPSSA 82
           +  +V GKVSC DC  ++D S I V V C         +T+  G F  +LPS        
Sbjct: 35  SASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFTVTTDKKGDFISELPSKI-----E 89

Query: 83  GNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTISTPLSFMKSCPQNTNCKAAKPVGS 142
            NC A+L G   QLYA++ N  S+I+K    + Y +S+ L F+KSCP++          S
Sbjct: 90  SNCEAELQGSVKQLYASKNNVKSKIVK-LGGDKYGLSSKLFFLKSCPRSFG-----SFSS 143

Query: 143 SKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172
           SKTVDLP+PPEWGLAP+SYYVPF+PIIGIP
Sbjct: 144 SKTVDLPVPPEWGLAPTSYYVPFLPIIGIP 173