Miyakogusa Predicted Gene

Lj3g3v2990310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2990310.1 tr|B9HPW4|B9HPW4_POPTR NAC domain protein,
IPR003441 OS=Populus trichocarpa GN=NAC113 PE=4 SV=1,65.28,2e-19,NAC
domain,No apical meristem (NAM) protein; FAMILY NOT NAMED,NULL; NAM,No
apical meristem (NAM) pro,CUFF.45078.1
         (94 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22380.1 | Symbols: anac090, NAC090 | NAC domain containing p...    93   4e-20
AT3G44350.2 | Symbols: anac061, NAC061 | NAC domain containing p...    89   7e-19
AT3G44350.1 | Symbols: anac061, NAC061 | NAC domain containing p...    60   2e-10
AT5G63790.1 | Symbols: ANAC102, NAC102 | NAC domain containing p...    48   1e-06
AT1G76420.1 | Symbols: CUC3, NAC368, ANAC031 | NAC (No Apical Me...    48   2e-06
AT5G08790.1 | Symbols: ATAF2, anac081 | NAC (No Apical Meristem)...    47   2e-06
AT4G17980.1 | Symbols: anac071, NAC071 | NAC domain containing p...    47   3e-06
AT4G27410.2 | Symbols: RD26, ANAC072 | NAC (No Apical Meristem) ...    46   6e-06
AT4G27410.3 | Symbols: RD26 | NAC (No Apical Meristem) domain tr...    46   6e-06
AT2G02450.2 | Symbols: ANAC034, ANAC035, LOV1, NAC035 | NAC doma...    46   6e-06
AT3G15500.1 | Symbols: ATNAC3, ANAC055, NAC055, NAC3 | NAC domai...    45   7e-06
AT1G52890.1 | Symbols: ANAC019, NAC019 | NAC domain containing p...    45   9e-06
AT2G02450.1 | Symbols: ANAC034, ANAC035, LOV1, NAC035 | NAC doma...    45   9e-06

>AT5G22380.1 | Symbols: anac090, NAC090 | NAC domain containing
           protein 90 | chr5:7408924-7410038 REVERSE LENGTH=235
          Length = 235

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 2/76 (2%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVYVISGSFRSFDRR 60
           MVFY GKAP+GRKTKWKMNEY A+  + N S+   P+LRREFSLCRVY+ +GS R+FDRR
Sbjct: 115 MVFYTGKAPTGRKTKWKMNEYHAVDETVNAST--IPKLRREFSLCRVYITTGSSRAFDRR 172

Query: 61  PLKNERVESRLVHDEA 76
           P    + E  L  D A
Sbjct: 173 PEGVLQTERMLTSDVA 188


>AT3G44350.2 | Symbols: anac061, NAC061 | NAC domain containing
           protein 61 | chr3:16022836-16024487 REVERSE LENGTH=241
          Length = 241

 Score = 89.0 bits (219), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 3/71 (4%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVYVISGSFRSFDRR 60
           MVFY GKAP+GRKTKWKMNEY+A++ +   S +  P+LR EFS+CR+Y+ SGS R+FDRR
Sbjct: 114 MVFYTGKAPTGRKTKWKMNEYKAVETA---SVSTIPKLRPEFSICRIYIKSGSSRAFDRR 170

Query: 61  PLKNERVESRL 71
           P +   +E  L
Sbjct: 171 PTEAYAIERNL 181


>AT3G44350.1 | Symbols: anac061, NAC061 | NAC domain containing
           protein 61 | chr3:16022836-16024487 REVERSE LENGTH=228
          Length = 228

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 16/71 (22%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVYVISGSFRSFDRR 60
           MVFY GKAP+GRKTKWKMNEY+A++ +   S +  P+             SGS R+FDRR
Sbjct: 114 MVFYTGKAPTGRKTKWKMNEYKAVETA---SVSTIPK-------------SGSSRAFDRR 157

Query: 61  PLKNERVESRL 71
           P +   +E  L
Sbjct: 158 PTEAYAIERNL 168


>AT5G63790.1 | Symbols: ANAC102, NAC102 | NAC domain containing
           protein 102 | chr5:25526887-25528013 REVERSE LENGTH=312
          Length = 312

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLR-REFSLCRVYVISGSFRSF 57
           +VFY GKAP G KT W M+EYR   V  + S+     LR  ++ LCR+Y   G+   +
Sbjct: 152 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKY 209


>AT1G76420.1 | Symbols: CUC3, NAC368, ANAC031 | NAC (No Apical
           Meristem) domain transcriptional regulator superfamily
           protein | chr1:28672029-28673835 REVERSE LENGTH=334
          Length = 334

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 5/52 (9%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVYVISG 52
           +VFYKG+AP G KTKW M+EYR   + N+ S   T   + E+ +CRV+  +G
Sbjct: 127 LVFYKGRAPRGLKTKWVMHEYR---LENDHSHRHT--CKEEWVICRVFNKTG 173


>AT5G08790.1 | Symbols: ATAF2, anac081 | NAC (No Apical Meristem)
           domain transcriptional regulator superfamily protein |
           chr5:2859113-2860144 REVERSE LENGTH=283
          Length = 283

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLR-REFSLCRVYVISGSFRSF-- 57
           +VFY GKAP G KT W M+EYR   V  + S      LR  ++ LCR+Y   G+   +  
Sbjct: 109 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFP 168

Query: 58  -DRRP 61
            D +P
Sbjct: 169 ADEKP 173


>AT4G17980.1 | Symbols: anac071, NAC071 | NAC domain containing
           protein 71 | chr4:9978850-9980038 REVERSE LENGTH=262
          Length = 262

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRV 47
           +VFY+G+AP G +T W M+EYR   + ++  S  +P  +  F+LCRV
Sbjct: 113 LVFYEGRAPLGDRTNWFMHEYRLCDIDDH--SQKSPNFKGAFALCRV 157


>AT4G27410.2 | Symbols: RD26, ANAC072 | NAC (No Apical Meristem)
           domain transcriptional regulator superfamily protein |
           chr4:13707928-13709013 REVERSE LENGTH=297
          Length = 297

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 4/48 (8%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVY 48
           +VFY GKAP G KT W M+EYR I+ S +  S+       ++ LCR+Y
Sbjct: 117 LVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKL----DDWVLCRIY 160


>AT4G27410.3 | Symbols: RD26 | NAC (No Apical Meristem) domain
           transcriptional regulator superfamily protein |
           chr4:13707928-13709013 REVERSE LENGTH=314
          Length = 314

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 4/48 (8%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVY 48
           +VFY GKAP G KT W M+EYR I+ S +  S+       ++ LCR+Y
Sbjct: 134 LVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKL----DDWVLCRIY 177


>AT2G02450.2 | Symbols: ANAC034, ANAC035, LOV1, NAC035 | NAC domain
           containing protein 35 | chr2:648044-650649 FORWARD
           LENGTH=414
          Length = 414

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVY 48
           +VFY GKAP G +T W MNEYR       +   A      E SLCRVY
Sbjct: 155 LVFYSGKAPKGTRTSWIMNEYRLPHHETEKYQKA------EISLCRVY 196


>AT3G15500.1 | Symbols: ATNAC3, ANAC055, NAC055, NAC3 | NAC domain
           containing protein 3 | chr3:5234731-5235882 FORWARD
           LENGTH=317
          Length = 317

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVY 48
           +VFY GKAP G KT W M+EYR I+ S    ST       ++ LCR+Y
Sbjct: 117 LVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKL----DDWVLCRIY 160


>AT1G52890.1 | Symbols: ANAC019, NAC019 | NAC domain containing
           protein 19 | chr1:19697292-19698444 REVERSE LENGTH=317
          Length = 317

 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVY 48
           +VFY GKAP G KT W M+EYR I+ S    ST       ++ LCR+Y
Sbjct: 117 LVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKL----DDWVLCRIY 160


>AT2G02450.1 | Symbols: ANAC034, ANAC035, LOV1, NAC035 | NAC domain
           containing protein 35 | chr2:648044-650649 FORWARD
           LENGTH=379
          Length = 379

 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 1   MVFYKGKAPSGRKTKWKMNEYRAIQVSNNQSSTATPQLRREFSLCRVY 48
           +VFY GKAP G +T W MNEYR       +   A      E SLCRVY
Sbjct: 155 LVFYSGKAPKGTRTSWIMNEYRLPHHETEKYQKA------EISLCRVY 196