Miyakogusa Predicted Gene

Lj3g3v2986080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2986080.1 tr|I3SP94|I3SP94_LOTJA Uroporphyrinogen
decarboxylase OS=Lotus japonicus PE=2 SV=1,96.98,0,UROPORPHYRINOGEN
DECARBOXYLASE,Uroporphyrinogen decarboxylase HemE;
METHYLTETRAHYDROFOLATE:HOMOCYSTE,CUFF.45129.1
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   266   1e-71
AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   266   1e-71
AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   233   9e-62
AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase | ...   177   4e-45

>AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  266 bits (679), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 140/149 (93%)

Query: 51  DPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWK 110
           DPLLVKAA+G  +SRPPAWMMRQAGRYMAVY+KLA+KHPSFRERSE TDLIVEISLQPW+
Sbjct: 59  DPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQ 118

Query: 111 AFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKALHSIDLDRLRFVGD 170
           AFRPDGVIIFSDILTPLPAFG+ FDIE+V+GPVIQSPIR+EE +K LH ID ++L+FVGD
Sbjct: 119 AFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPIDFEKLQFVGD 178

Query: 171 SLKLLRQEVGGHAAVLGFVGAPWTLATYI 199
           SLK+LR+EVG HAAVLGFVGAPWT+ATYI
Sbjct: 179 SLKILRREVGEHAAVLGFVGAPWTIATYI 207


>AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  266 bits (679), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 140/149 (93%)

Query: 51  DPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWK 110
           DPLLVKAA+G  +SRPPAWMMRQAGRYMAVY+KLA+KHPSFRERSE TDLIVEISLQPW+
Sbjct: 59  DPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQ 118

Query: 111 AFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKALHSIDLDRLRFVGD 170
           AFRPDGVIIFSDILTPLPAFG+ FDIE+V+GPVIQSPIR+EE +K LH ID ++L+FVGD
Sbjct: 119 AFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPIDFEKLQFVGD 178

Query: 171 SLKLLRQEVGGHAAVLGFVGAPWTLATYI 199
           SLK+LR+EVG HAAVLGFVGAPWT+ATYI
Sbjct: 179 SLKILRREVGEHAAVLGFVGAPWTIATYI 207


>AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5021290-5022577 FORWARD LENGTH=341
          Length = 341

 Score =  233 bits (593), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 109/130 (83%), Positives = 123/130 (94%)

Query: 70  MMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPA 129
           MMRQAGRYMAVY+KLA+KHPSFRERSE TDLIVEISLQPW+AFRPDGVIIFSDILTPLPA
Sbjct: 1   MMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPA 60

Query: 130 FGIEFDIEDVRGPVIQSPIRSEEGLKALHSIDLDRLRFVGDSLKLLRQEVGGHAAVLGFV 189
           FG+ FDIE+V+GPVIQSPIR+EE +K LH ID ++L+FVGDSLK+LR+EVG HAAVLGFV
Sbjct: 61  FGVPFDIEEVKGPVIQSPIRTEEDMKRLHPIDFEKLQFVGDSLKILRREVGEHAAVLGFV 120

Query: 190 GAPWTLATYI 199
           GAPWT+ATYI
Sbjct: 121 GAPWTIATYI 130


>AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase |
           chr2:16912961-16914988 FORWARD LENGTH=394
          Length = 394

 Score =  177 bits (450), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 83/150 (55%), Positives = 112/150 (74%), Gaps = 1/150 (0%)

Query: 51  DPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWK 110
           +PLL++A +G+ V RPP W+MRQAGRYM  Y+ L EK+PSFR+RSE  DL+VEISLQPWK
Sbjct: 53  EPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWK 112

Query: 111 AFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKALHS-IDLDRLRFVG 169
            F+PDGVI+FSDILTPL    I FDI   +GP+I +P +S   +  +   +  + + +VG
Sbjct: 113 VFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVG 172

Query: 170 DSLKLLRQEVGGHAAVLGFVGAPWTLATYI 199
           ++L+ LR EV   AAVLGFVGAP+TL++Y+
Sbjct: 173 EALRRLRNEVNNEAAVLGFVGAPFTLSSYV 202