Miyakogusa Predicted Gene
- Lj3g3v2983960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2983960.1 Non Chatacterized Hit- tr|A5CBC0|A5CBC0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,33,5e-16,L
domain-like,NULL; no description,NULL; LRR_7,NULL; LRR_1,Leucine-rich
repeat,CUFF.45058.1
(357 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14460.1 | Symbols: | LRR and NB-ARC domains-containing dise... 145 4e-35
AT3G44670.2 | Symbols: | Disease resistance protein (TIR-NBS-LR... 57 2e-08
AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-LR... 57 2e-08
AT5G18360.1 | Symbols: | Disease resistance protein (TIR-NBS-LR... 52 4e-07
AT5G18350.1 | Symbols: | Disease resistance protein (TIR-NBS-LR... 50 2e-06
AT4G16890.1 | Symbols: SNC1, BAL | disease resistance protein (T... 50 3e-06
AT3G44400.2 | Symbols: | Disease resistance protein (TIR-NBS-LR... 49 8e-06
AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-LR... 49 8e-06
AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-LR... 48 8e-06
AT3G44630.1 | Symbols: | Disease resistance protein (TIR-NBS-LR... 48 1e-05
AT3G44630.2 | Symbols: | Disease resistance protein (TIR-NBS-LR... 48 1e-05
>AT3G14460.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr3:4851990-4856264 REVERSE
LENGTH=1424
Length = 1424
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 168/341 (49%), Gaps = 38/341 (11%)
Query: 15 AFPKLRSLVIENCPKLRGDLQSHLPA-LEQLEIKDCRQLACSLPRAPSMRRLVLVQANKV 73
++P L L+I C L SH P L+ L I+DC++L + P+
Sbjct: 1114 SYPNLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKKLNFTESLQPTR----------- 1162
Query: 74 TWQEFPIAIEYLEIGVSSVVMKSMFEAIINRQPTCLQSLESRDCSFPNLEQLNISDCENL 133
++ + +EYL IG S + + P L FP L L+I DCE+
Sbjct: 1163 SYSQ----LEYLFIGSSCSNLVNF--------PLSL---------FPKLRSLSIRDCESF 1201
Query: 134 ESLSVSQSWGAALQNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISFCDKLKSLPRRMDT 193
++ S+ G L SL I CP+L + GL P L+S +S C KL++LP ++
Sbjct: 1202 KTFSIHAGLGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFG 1261
Query: 194 LLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLSSLTWP--SMNMLTHLWLYG 251
L L L I CP IE+ P G P +LR L IS C+KL + W + L +L + G
Sbjct: 1262 LTSLLSLF-IIKCPEIETIPGGGFPSNLRTLCISLCDKLTPRIEWGLRDLENLRNLEIDG 1320
Query: 252 PCDGIKSFPEQGLLPPSLVSISVCEFSNLETFNCEGLLHLTSLQTLRIVYCPKVENMVGE 311
+ I+SFPE+GLLP S+ S+ + F NL+T N +G +++T+ I C K++ + E
Sbjct: 1321 GNEDIESFPEEGLLPKSVFSLRISRFENLKTLNRKGFHDTKAIETMEISGCDKLQISIDE 1380
Query: 312 RLPASLTELHIYECPLLGEQCHMKHTQIWPKVSHIPCIYVD 352
LP L+ L I C LL E T+ + KV +IP + +D
Sbjct: 1381 DLPP-LSCLRISSCSLLTETFAEVETEFF-KVLNIPYVEID 1419
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 89/210 (42%), Gaps = 55/210 (26%)
Query: 172 NLTSFTISFCDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEK 231
NL S I CD L SLP + P L L I C +ESFP P +L+ L I +C+K
Sbjct: 1092 NLQSLHIDSCDGLTSLPENLTESYPNLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKK 1151
Query: 232 L-LSSLTWP--SMNMLTHLWLYGPCDGIKSFPEQGLLPPSLVSISV--CE----FS---- 278
L + P S + L +L++ C + +FP L P L S+S+ CE FS
Sbjct: 1152 LNFTESLQPTRSYSQLEYLFIGSSCSNLVNFPLS--LFPKLRSLSIRDCESFKTFSIHAG 1209
Query: 279 -----------------NLETF----------------NC-------EGLLHLTSLQTLR 298
NLETF NC E L LTSL +L
Sbjct: 1210 LGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLF 1269
Query: 299 IVYCPKVENMVGERLPASLTELHIYECPLL 328
I+ CP++E + G P++L L I C L
Sbjct: 1270 IIKCPEIETIPGGGFPSNLRTLCISLCDKL 1299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 109/238 (45%), Gaps = 31/238 (13%)
Query: 12 PPCAFPKLRSLVIENCPKLR-----GDLQSHLPALEQLEIKDCRQLACSLPRA----PSM 62
P FPKLRSL I +C + L ALE LEI+DC L + P+ P +
Sbjct: 1183 PLSLFPKLRSLSIRDCESFKTFSIHAGLGDDRIALESLEIRDCPNLE-TFPQGGLPTPKL 1241
Query: 63 RRLVLVQANKVTWQEFPIAIEYLEIGVSSVVMKSMFEAIINRQPTCLQSLESRDCSFP-N 121
++L K+ Q P + G++S++ S+F II C + FP N
Sbjct: 1242 SSMLLSNCKKL--QALPEKL----FGLTSLL--SLF--IIK----CPEIETIPGGGFPSN 1287
Query: 122 LEQLNISDCENLESLSVSQSWG-AALQNLSSLRISSC-PSLVSLAIEGLAVPNLTSFTIS 179
L L IS C+ L+ WG L+NL +L I + S EGL ++ S IS
Sbjct: 1288 LRTLCISLCDK---LTPRIEWGLRDLENLRNLEIDGGNEDIESFPEEGLLPKSVFSLRIS 1344
Query: 180 FCDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLSSLT 237
+ LK+L R+ ++ +EIS C +++ +E +PP L L IS+C L +
Sbjct: 1345 RFENLKTLNRKGFHDTKAIETMEISGCDKLQISIDEDLPP-LSCLRISSCSLLTETFA 1401
>AT3G44670.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16217242-16221425 FORWARD
LENGTH=1219
Length = 1219
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 41 LEQLEIKDCRQLA---CSLPRAPSMRRLVLVQ-ANKVTWQEFPIAIEYLEIGVSSVVMKS 96
LE+L+++DC L S+ + S++RL L + ++ V F A + E+ + +
Sbjct: 741 LEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLE 800
Query: 97 MFEAIINRQPTCLQSLESRDCS----------FPNLEQLNISDCENLESLSVSQSWGAAL 146
IN LQ L +CS NL++L++ +C +L L +S G A
Sbjct: 801 KLPPSIN--ANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLS--IGTA- 855
Query: 147 QNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISFCDKLKSLPRRMDTLLPTLKLLEISNC 206
NL L IS C SLV L + NL F +S C L LP ++ L L L ++ C
Sbjct: 856 TNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININ--LKFLDTLNLAGC 913
Query: 207 PRIESFPEEGVP---------PSLRELAISNCEKLLS 234
+++SFPE LR+L I+NC L+S
Sbjct: 914 SQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVS 950
>AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16217242-16221425 FORWARD
LENGTH=1219
Length = 1219
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 41 LEQLEIKDCRQLA---CSLPRAPSMRRLVLVQ-ANKVTWQEFPIAIEYLEIGVSSVVMKS 96
LE+L+++DC L S+ + S++RL L + ++ V F A + E+ + +
Sbjct: 741 LEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLE 800
Query: 97 MFEAIINRQPTCLQSLESRDCS----------FPNLEQLNISDCENLESLSVSQSWGAAL 146
IN LQ L +CS NL++L++ +C +L L +S G A
Sbjct: 801 KLPPSIN--ANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLS--IGTA- 855
Query: 147 QNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISFCDKLKSLPRRMDTLLPTLKLLEISNC 206
NL L IS C SLV L + NL F +S C L LP ++ L L L ++ C
Sbjct: 856 TNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININ--LKFLDTLNLAGC 913
Query: 207 PRIESFPEEGVP---------PSLRELAISNCEKLLS 234
+++SFPE LR+L I+NC L+S
Sbjct: 914 SQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVS 950
>AT5G18360.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:6080049-6083027 REVERSE LENGTH=900
Length = 900
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 98 FEAIINRQPTCLQSLESRDCSFPNLEQLNISDCENLESL-SVSQSWGAALQNLSSLRISS 156
F +IN + + L+ L +L+Q+++S ENL+ + +S++ N+ L +S
Sbjct: 608 FLVVINIRESQLEKLWEGTQPLRSLKQMDLSKSENLKEIPDLSKA-----VNIEELCLSY 662
Query: 157 CPSLVSLAIEGLAVPNLTSFTISFCDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEG 216
C SLV L + L + +C KL+ +P MD L +L +L + C R+ESFPE
Sbjct: 663 CGSLVMLPSSIKNLNKLVVLDMKYCSKLEIIPCNMD--LESLSILNLDGCSRLESFPEIS 720
Query: 217 VPPSLRELAISNCEKLLSSL-TWPSMNMLTHLWLYGPCDGIKSFP 260
L+ + E++ +++ +WP + L C +K+FP
Sbjct: 721 SKIGFLSLSETAIEEIPTTVASWPCLAALD----MSGCKNLKTFP 761
>AT5G18350.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:6074069-6078569 REVERSE LENGTH=1245
Length = 1245
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 121 NLEQLNISDCENLESLSVSQSWGAALQNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISF 180
NLE+L++S C L L ++ S G A NL L+++ C L L NL +
Sbjct: 669 NLEELDLSSCSGL--LELTDSIGKA-TNLKRLKLACCSLLKKLPSSIGDATNLQVLDLFH 725
Query: 181 CDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLSSLTWPS 240
C+ + LP+ + L LK+LE+ C ++ + P P L L++S CE L + T+ +
Sbjct: 726 CESFEELPKSIGKL-TNLKVLELMRCYKLVTLPNSIKTPKLPVLSMSECEDLQAFPTYIN 784
Query: 241 MNMLTHLWLYGPCDGIKSFPE 261
+ C +K FPE
Sbjct: 785 LE---------DCTQLKMFPE 796
>AT4G16890.1 | Symbols: SNC1, BAL | disease resistance protein
(TIR-NBS-LRR class), putative | chr4:9500506-9505455
REVERSE LENGTH=1301
Length = 1301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 18 KLRSLVIENCPKLRG--DLQSHLPALEQLEIKDCRQL-------------ACSLPRAPSM 62
KL SL++ NC L +L L +LE+K+C L L S+
Sbjct: 797 KLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSL 856
Query: 63 RRLVLVQANKVTWQEFPIAIEYLEIGVSSVVMKSMFEAIINRQPTCLQSLESRDCSFPNL 122
R L+ N V AIE + + ++ E ++ T L+ L + D + +L
Sbjct: 857 RSFPLISTNIVWLYLENTAIEEIPSTIGNLHRLVRLEM---KKCTGLEVLPT-DVNLSSL 912
Query: 123 EQLNISDCENLES---LSVSQSW----GAALQ---------NLSSLRISSCPSLVSLAIE 166
E L++S C +L S +S S W A++ NL +L++++C SLV+L
Sbjct: 913 ETLDLSGCSSLRSFPLISESIKWLYLENTAIEEIPDLSKATNLKNLKLNNCKSLVTLPTT 972
Query: 167 GLAVPNLTSFTISFCDKLKSLPRRMDTLLPTLKLLEISNCPRIESFP 213
+ L SF + C L+ LP +D L +L +L++S C + +FP
Sbjct: 973 IGNLQKLVSFEMKECTGLEVLP--IDVNLSSLMILDLSGCSSLRTFP 1017
>AT3G44400.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16046331-16049668 REVERSE
LENGTH=1007
Length = 1007
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 85 LEIGVSSVVMKSMFEAIINRQPTCLQSLESRDCSFPNLEQL-NISDCENLESLSVSQ--- 140
+E+ +SS ++ ++E +Q L+ ++ D +L++L N+S NLE L + +
Sbjct: 650 VELDMSSSKLRKLWEG--TKQLRNLKWMDLSDSE--DLKELPNLSTATNLEELKLRRCSS 705
Query: 141 --SWGAALQNLSSLRI---SSCPSLVSLAIEGLAVPNLTSFTISFCDKLKSLPRRMDTLL 195
++++ L+SL+I SC SLV L G A L + C L LP ++
Sbjct: 706 LVELPSSIEKLTSLQILDLHSCSSLVELPSFGNAT-KLEKLDLENCSSLVKLPPSINA-- 762
Query: 196 PTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLS-SLTWPSMNMLTHLWLYGPCD 254
L+ L + NC R+ P +LREL + NC L+ L+W + C+
Sbjct: 763 NNLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLSWVKRMSRLRVLTLNNCN 822
Query: 255 GIKSFPEQGLLPPSLVSISVCEFSNLETFNC 285
+ S P+ LP SL I +LE +C
Sbjct: 823 NLVSLPQ---LPDSLDYIYADNCKSLERLDC 850
>AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16046331-16049668 REVERSE
LENGTH=1007
Length = 1007
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 85 LEIGVSSVVMKSMFEAIINRQPTCLQSLESRDCSFPNLEQL-NISDCENLESLSVSQ--- 140
+E+ +SS ++ ++E +Q L+ ++ D +L++L N+S NLE L + +
Sbjct: 650 VELDMSSSKLRKLWEG--TKQLRNLKWMDLSDSE--DLKELPNLSTATNLEELKLRRCSS 705
Query: 141 --SWGAALQNLSSLRI---SSCPSLVSLAIEGLAVPNLTSFTISFCDKLKSLPRRMDTLL 195
++++ L+SL+I SC SLV L G A L + C L LP ++
Sbjct: 706 LVELPSSIEKLTSLQILDLHSCSSLVELPSFGNAT-KLEKLDLENCSSLVKLPPSINA-- 762
Query: 196 PTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLS-SLTWPSMNMLTHLWLYGPCD 254
L+ L + NC R+ P +LREL + NC L+ L+W + C+
Sbjct: 763 NNLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLSWVKRMSRLRVLTLNNCN 822
Query: 255 GIKSFPEQGLLPPSLVSISVCEFSNLETFNC 285
+ S P+ LP SL I +LE +C
Sbjct: 823 NLVSLPQ---LPDSLDYIYADNCKSLERLDC 850
>AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16196292-16200410 FORWARD
LENGTH=1240
Length = 1240
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 121 NLEQLNISDCENLESLSVSQSWGAALQNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISF 180
NL QL + +C +L L +S G A NL L I C SLV L + NL F +S
Sbjct: 810 NLHQLKLQNCSSLIELPLS--IGTA-NNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLSN 866
Query: 181 CDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLS 234
C L LP + L L +L + C ++E+ P SLR L +++C +L S
Sbjct: 867 CSNLVELPSSIGN-LQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKS 919
>AT3G44630.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16196292-16200423 FORWARD
LENGTH=1214
Length = 1214
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 121 NLEQLNISDCENLESLSVSQSWGAALQNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISF 180
NL QL + +C +L L +S G A NL L I C SLV L + NL F +S
Sbjct: 810 NLHQLKLQNCSSLIELPLS--IGTA-NNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLSN 866
Query: 181 CDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLSSLTWPS 240
C L LP + L L +L + C ++E+ P SLR L +++C +L S +P
Sbjct: 867 CSNLVELPSSIGN-LQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKS---FPE 922
Query: 241 MNM-LTHLWLYGPCDGIKSFPEQGLLPPSLVSISVCEFSNLETF 283
++ ++ L L G IK P L S ++V E S E+
Sbjct: 923 ISTHISELRLKGT--AIKEVP---LSITSWSRLAVYEMSYFESL 961
>AT3G44630.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16196292-16200423 FORWARD
LENGTH=1214
Length = 1214
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 121 NLEQLNISDCENLESLSVSQSWGAALQNLSSLRISSCPSLVSLAIEGLAVPNLTSFTISF 180
NL QL + +C +L L +S G A NL L I C SLV L + NL F +S
Sbjct: 810 NLHQLKLQNCSSLIELPLS--IGTA-NNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLSN 866
Query: 181 CDKLKSLPRRMDTLLPTLKLLEISNCPRIESFPEEGVPPSLRELAISNCEKLLSSLTWPS 240
C L LP + L L +L + C ++E+ P SLR L +++C +L S +P
Sbjct: 867 CSNLVELPSSIGN-LQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKS---FPE 922
Query: 241 MNM-LTHLWLYGPCDGIKSFPEQGLLPPSLVSISVCEFSNLETF 283
++ ++ L L G IK P L S ++V E S E+
Sbjct: 923 ISTHISELRLKGT--AIKEVP---LSITSWSRLAVYEMSYFESL 961