Miyakogusa Predicted Gene

Lj3g3v2928440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2928440.1 Non Chatacterized Hit- tr|I1LRL7|I1LRL7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22241
PE,91.11,6e-18,coiled-coil,NULL; DUF3049,Protein of unknown function
DUF3049; seg,NULL,CUFF.45024.1
         (573 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22090.2 | Symbols:  | Protein of unknown function (DUF3049) ...   117   2e-26
AT5G22090.1 | Symbols:  | Protein of unknown function (DUF3049) ...   117   2e-26

>AT5G22090.2 | Symbols:  | Protein of unknown function (DUF3049) |
           chr5:7315003-7316394 REVERSE LENGTH=463
          Length = 463

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 101/178 (56%), Gaps = 30/178 (16%)

Query: 31  KHGIVTILG-CDTEKNKASSLRRTLSADMSSKKWLPQNGSSPKQKIASSEQLSDPKTIAX 89
           + GIV+ILG   +  + A SLRRT SAD+SSK W+ QNG SP ++I+SSE+L        
Sbjct: 19  QQGIVSILGGISSNTSSAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSEKL-------- 70

Query: 90  XXXXXXXXXXXXNKDXXXXXXXXXXXXXIWSSIQ--RNKKEEQDKAVAGSIDTWSSIISM 147
                         D             IW+ IQ  +N K+++++   G  D WSSI+S 
Sbjct: 71  ------------RPDEEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSE 118

Query: 148 KSNDEISKSL--PPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSDGVFSPSSYTSS 203
           K   E SK    PPY+HPL+KR+ S  LS KSLEICTESLGSETG DG    SS+ SS
Sbjct: 119 KKKTESSKDTVPPPYVHPLMKRASS--LSEKSLEICTESLGSETGCDGF---SSHASS 171



 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 33/37 (89%)

Query: 277 HMRPYRDNGRLVLEAVTLPSLNNFSVQRQDGRLVLTF 313
           HM+  RDNGRLVLEAV++PS NNFS +RQDGRL+LTF
Sbjct: 241 HMKTRRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTF 277


>AT5G22090.1 | Symbols:  | Protein of unknown function (DUF3049) |
           chr5:7315003-7316394 REVERSE LENGTH=463
          Length = 463

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 101/178 (56%), Gaps = 30/178 (16%)

Query: 31  KHGIVTILG-CDTEKNKASSLRRTLSADMSSKKWLPQNGSSPKQKIASSEQLSDPKTIAX 89
           + GIV+ILG   +  + A SLRRT SAD+SSK W+ QNG SP ++I+SSE+L        
Sbjct: 19  QQGIVSILGGISSNTSSAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSEKL-------- 70

Query: 90  XXXXXXXXXXXXNKDXXXXXXXXXXXXXIWSSIQ--RNKKEEQDKAVAGSIDTWSSIISM 147
                         D             IW+ IQ  +N K+++++   G  D WSSI+S 
Sbjct: 71  ------------RPDEEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSE 118

Query: 148 KSNDEISKSL--PPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSDGVFSPSSYTSS 203
           K   E SK    PPY+HPL+KR+ S  LS KSLEICTESLGSETG DG    SS+ SS
Sbjct: 119 KKKTESSKDTVPPPYVHPLMKRASS--LSEKSLEICTESLGSETGCDGF---SSHASS 171



 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 33/37 (89%)

Query: 277 HMRPYRDNGRLVLEAVTLPSLNNFSVQRQDGRLVLTF 313
           HM+  RDNGRLVLEAV++PS NNFS +RQDGRL+LTF
Sbjct: 241 HMKTRRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTF 277