Miyakogusa Predicted Gene
- Lj3g3v2923210.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2923210.2 tr|E9E828|E9E828_METAQ DNA repair protein RAD16
OS=Metarhizium acridum (strain CQMa 102) GN=MAC_0602,32.68,2e-19,Ring
finger,Zinc finger, RING-type; no description,Zinc finger,
RING/FYVE/PHD-type; RING/U-box,NULL;,CUFF.44997.2
(153 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 190 3e-49
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 117 3e-27
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 57 4e-09
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 57 5e-09
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 57 6e-09
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 56 1e-08
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 54 5e-08
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 49 1e-06
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 190 bits (483), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Query: 1 MNHYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDGTVEQVCGICDEPVEDPVV 60
MN+YA IF LLT+LRQAVDHPYLVVYS V + EQ CG+C +P ED VV
Sbjct: 534 MNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANANLV--DENKSEQECGLCHDPAEDYVV 591
Query: 61 TSCEHVFCNACLVDFSASMDPVLCPSCSLPITVEITSSKDVSGKSNDTAIKGFRSSSILY 120
TSC HVFC ACL+ FSAS+ V CP+CS +TV+ T+ D K++ T +KGFR+SSIL
Sbjct: 592 TSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKADTEHKASKTTLKGFRASSILN 651
Query: 121 KIELENFQTSTKIEALREEIYFMIQRDGSAKGI 153
+I+L++FQTSTKIEALREEI FM++RDGSAK I
Sbjct: 652 RIKLDDFQTSTKIEALREEIRFMVERDGSAKAI 684
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 84/153 (54%), Gaps = 40/153 (26%)
Query: 1 MNHYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDGTVEQVCGICDEPVEDPVV 60
MN+YA IFGLL +LRQAVDHPYLV YS P + A+ E+ CG +P +D V
Sbjct: 417 MNNYAHIFGLLIRLRQAVDHPYLVSYSSPSGANANLLDANKN--EKECGFGHDPSKDYFV 474
Query: 61 TSCEHVFCNACLVDFSASMDPVLCPSCSLPITVEITSSKDVSGKSNDTAIKGFRSSSILY 120
TS EH +++ T +KGFR+SSIL
Sbjct: 475 TSSEH--------------------------------------QASKTKLKGFRASSILN 496
Query: 121 KIELENFQTSTKIEALREEIYFMIQRDGSAKGI 153
+I L++F+TSTKIEALREEI FM++RD SAK I
Sbjct: 497 RINLDDFKTSTKIEALREEIRFMVERDWSAKAI 529
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 22/115 (19%)
Query: 3 HYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDGTVEQ---------------- 46
+YA+I +L +LRQA DHP LV +++ G V S+ V++
Sbjct: 621 NYANILLMLLRLRQACDHPQLVKRYNSDSV--GKV--SEEAVKKLPKEDLVSLLSRLESS 676
Query: 47 -VCGICDEPVEDPVVTSCEHVFCNACLVDF-SASMDPVLCPSCSLPITVEITSSK 99
+C +C +P EDPVVT C H+FC C+ D+ + D P C + ++ SK
Sbjct: 677 PICCVCHDPPEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSK 731
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 3 HYADIFGLLTKLRQAVDHPYLV------VYSKPEALKGGGVAASDGTVEQVCGICDEPVE 56
+Y +I +L +LRQA DHP LV + L + SD ++ +CGIC++ E
Sbjct: 779 NYVNILLMLLRLRQACDHPLLVNGEYSFTWESSVGLAKKQIQ-SDASLA-ICGICNDAPE 836
Query: 57 DPVVTSCEHVFCNACLVDFSASMDPVLCP--SCSLPITVEITSSK 99
D V + C HVFC C+ + + D CP +C++ +T+ SSK
Sbjct: 837 DAVASVCGHVFCKQCIYE-RLTGDSNHCPFANCNVRLTISSLSSK 880
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 3 HYADIFGLLTKLRQAVDHPYLV------VYSKPEALKGGGVAASDGTVEQVCGICDEPVE 56
+Y +I +L +LRQA DHP LV + L + SD ++ +CGIC++ E
Sbjct: 937 NYVNILLMLLRLRQACDHPLLVNGEYSFTWESSVGLAKKQIQ-SDASL-AICGICNDAPE 994
Query: 57 DPVVTSCEHVFCNACLVDFSASMDPVLCP--SCSLPITVEITSSK 99
D V + C HVFC C+ + + D CP +C++ +T+ SSK
Sbjct: 995 DAVASVCGHVFCKQCIYE-RLTGDSNHCPFANCNVRLTISSLSSK 1038
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 74/172 (43%), Gaps = 47/172 (27%)
Query: 1 MNHYADIFGLLTKLRQAVDHPYLVV-------YSKPEAL-------------KGGGVAAS 40
+++YA I LL +LRQ DHP+LV+ YS L + G S
Sbjct: 716 LHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKDVPS 775
Query: 41 DGTVEQV-----------CGICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPSCSL 89
+ V++V C IC E +ED V+T C H C CL+ + LCP C
Sbjct: 776 EAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVC-- 833
Query: 90 PITVEITSSKDVSGKSNDTAIKGFRSSSILYKIELE-NFQTSTKIEALREEI 140
VS + TA R +++++E N+ S+KI AL EE+
Sbjct: 834 --------RNTVSKQELITAPTESR-----FQVDVEKNWVESSKITALLEEL 872
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 3 HYADIFGLLTKLRQAVDHPYLVV-YSKPEALK----GGGVAASDGTV---------EQVC 48
H A + +L +LRQA +HP LV YS + + G VA + + C
Sbjct: 336 HMAYLLVMLLRLRQACNHPQLVNGYSHSDTTRKMSDGVRVAPRENLIMFLDLLKLSSTTC 395
Query: 49 GICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPS 86
+C +P +DPVVT C HVFC C V + + D CP+
Sbjct: 396 SVCSDPPKDPVVTLCGHVFCYEC-VSVNINGDNNTCPA 432
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 1 MNHYADIFGLLTKLRQAVDH-----PYLVVYS----------KPEALKGGGVAASDGTVE 45
M +Y+ + ++ +LRQ D P L ++ KPE L+ A DG +
Sbjct: 555 MRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGE-D 613
Query: 46 QVCGICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPSCSLPIT 92
C IC P + ++T C H+FC AC++ P LCP C +T
Sbjct: 614 FDCPICISPPTNIIITRCAHIFCRACILQTLQRSKP-LCPLCRGSLT 659