Miyakogusa Predicted Gene

Lj3g3v2923160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2923160.1 Non Chatacterized Hit- tr|J3LZB8|J3LZB8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,52.75,5e-19,seg,NULL; FAMILY NOT NAMED,NULL; DUF1068,Protein
of unknown function DUF1068,CUFF.44995.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32580.1 | Symbols:  | Protein of unknown function (DUF1068) ...   220   3e-58
AT1G05070.1 | Symbols:  | Protein of unknown function (DUF1068) ...   220   5e-58
AT4G04360.1 | Symbols:  | Protein of unknown function (DUF1068) ...   182   9e-47
AT2G32580.2 | Symbols:  | Protein of unknown function (DUF1068) ...   156   9e-39
AT2G24290.1 | Symbols:  | Protein of unknown function (DUF1068) ...   144   4e-35
AT4G30996.1 | Symbols:  | Protein of unknown function (DUF1068) ...   139   1e-33

>AT2G32580.1 | Symbols:  | Protein of unknown function (DUF1068) |
           chr2:13827849-13829135 FORWARD LENGTH=183
          Length = 183

 Score =  220 bits (561), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 108/163 (66%), Positives = 126/163 (77%), Gaps = 4/163 (2%)

Query: 20  IASYILAPPLYWHFREGLAAVKHSSSSCAPCLCDCSSQQPILSIPQGLSNTSFGDCAKPD 79
           +  YIL PPLYWH  E LA    S++SC+ C+CDCSS  P+L+IP GLSN SF DCAK D
Sbjct: 19  MIGYILGPPLYWHLTEALAV---SATSCSACVCDCSSL-PLLTIPTGLSNGSFTDCAKRD 74

Query: 80  PEVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEADKCNSGMET 139
           PEV  DTEKN+AELL+EELK RE  ++E  +R D  LLEAKKI S YQKEADKCNSGMET
Sbjct: 75  PEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQKEADKCNSGMET 134

Query: 140 CEGAREKAELALVAQKKLSALWELRARQKGWKEGVTKSQSQGK 182
           CE AREKAE ALV QKKL+++WE RARQKG+K+G TKS  + K
Sbjct: 135 CEEAREKAEKALVEQKKLTSMWEQRARQKGYKDGATKSTVKSK 177


>AT1G05070.1 | Symbols:  | Protein of unknown function (DUF1068) |
           chr1:1457172-1458531 REVERSE LENGTH=184
          Length = 184

 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 110/163 (67%), Positives = 126/163 (77%), Gaps = 3/163 (1%)

Query: 20  IASYILAPPLYWHFREGLAAVKHSSSSCAPCLCDCSSQQPILSIPQGLSNTSFGDCAKPD 79
           +A YIL PPLYWH  E LAAV  S+SSC  C C+CS+   + +IP+ LSN SF DCAK D
Sbjct: 19  MAGYILGPPLYWHLTEALAAV--SASSCPSCPCECSTYSAV-TIPKELSNASFADCAKHD 75

Query: 80  PEVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEADKCNSGMET 139
           PEV  DTEKN+AELL+EELKLRE  +LE  +RADM LLEAKK+ S YQKEADKCNSGMET
Sbjct: 76  PEVNEDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQKEADKCNSGMET 135

Query: 140 CEGAREKAELALVAQKKLSALWELRARQKGWKEGVTKSQSQGK 182
           CE AREKAELAL  QKKL++ WE RARQKGW+EG TK   + K
Sbjct: 136 CEEAREKAELALAEQKKLTSRWEERARQKGWREGSTKPNVKSK 178


>AT4G04360.1 | Symbols:  | Protein of unknown function (DUF1068) |
           chr4:2133142-2133866 REVERSE LENGTH=176
          Length = 176

 Score =  182 bits (463), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 117/159 (73%), Gaps = 4/159 (2%)

Query: 19  CIASYILAPPLYWHFREGLAAVKHSSSSCAPCLCDCSSQQPILSIPQGLSNTSFGDCAKP 78
           CI +YI  P LYWH  E +A   HSS  C PC+CDCSSQ P+LSIP GLSN SF DC + 
Sbjct: 19  CIVAYIAGPSLYWHLNETIADSLHSS--CPPCVCDCSSQ-PLLSIPDGLSNHSFLDCMR- 74

Query: 79  DPEVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEADKCNSGME 138
             E + ++E +F E+++EELKLRE  A E++ RAD  LL+AKK ASQYQKEADKC+ GME
Sbjct: 75  HEEGSEESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKCSMGME 134

Query: 139 TCEGAREKAELALVAQKKLSALWELRARQKGWKEGVTKS 177
           TCE AREKAE AL  Q++LS +WELRARQ GWKEG   S
Sbjct: 135 TCELAREKAEAALDEQRRLSYMWELRARQGGWKEGTVAS 173


>AT2G32580.2 | Symbols:  | Protein of unknown function (DUF1068) |
           chr2:13828662-13829135 FORWARD LENGTH=121
          Length = 121

 Score =  156 bits (394), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 77/112 (68%), Positives = 89/112 (79%)

Query: 71  SFGDCAKPDPEVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEA 130
           S  +CAK DPEV  DTEKN+AELL+EELK RE  ++E  +R D  LLEAKKI S YQKEA
Sbjct: 4   SLVNCAKRDPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQKEA 63

Query: 131 DKCNSGMETCEGAREKAELALVAQKKLSALWELRARQKGWKEGVTKSQSQGK 182
           DKCNSGMETCE AREKAE ALV QKKL+++WE RARQKG+K+G TKS  + K
Sbjct: 64  DKCNSGMETCEEAREKAEKALVEQKKLTSMWEQRARQKGYKDGATKSTVKSK 115


>AT2G24290.1 | Symbols:  | Protein of unknown function (DUF1068) |
           chr2:10338779-10339859 FORWARD LENGTH=173
          Length = 173

 Score =  144 bits (362), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 1/152 (0%)

Query: 21  ASYILAPPLYWHFREGLAAVKHSSSS-CAPCLCDCSSQQPILSIPQGLSNTSFGDCAKPD 79
           A  +  P LYW   +G      S++S C PC+CD      +L I  GL+N S   C   D
Sbjct: 20  ALLVCGPALYWKLNKGFVGSARSTNSICPPCVCDFPPPLSLLQIAPGLANLSITGCGSDD 79

Query: 80  PEVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEADKCNSGMET 139
           PE+  + EK F +LL+EELKL+E VA E+ R  ++ L EAK++ASQYQKEA+KCN+  E 
Sbjct: 80  PELKEEMEKPFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEI 139

Query: 140 CEGAREKAELALVAQKKLSALWELRARQKGWK 171
           CE ARE+A+  L+ ++K++ LWE RARQ GW+
Sbjct: 140 CESARERAQALLLKERKITFLWERRARQLGWE 171


>AT4G30996.1 | Symbols:  | Protein of unknown function (DUF1068) |
           chr4:15101464-15102461 FORWARD LENGTH=172
          Length = 172

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 101/151 (66%)

Query: 21  ASYILAPPLYWHFREGLAAVKHSSSSCAPCLCDCSSQQPILSIPQGLSNTSFGDCAKPDP 80
           A  +  P LYW F +G      ++S C PC+CDC     +L I  GL+N S  DC   DP
Sbjct: 20  ALVVCGPALYWKFNKGFVGSTRANSLCPPCVCDCPPPLSLLQIAPGLANLSITDCGSDDP 79

Query: 81  EVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEADKCNSGMETC 140
           E+  + EK F +LL+EELKL+E VA E+ R  ++ L EAK++ASQYQKEA+KCN+  E C
Sbjct: 80  ELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQKEAEKCNAATEIC 139

Query: 141 EGAREKAELALVAQKKLSALWELRARQKGWK 171
           E ARE+AE  L+ ++K+++LWE RARQ GW+
Sbjct: 140 ESARERAEALLIKERKITSLWEKRARQSGWE 170