Miyakogusa Predicted Gene

Lj3g3v2920950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2920950.1 tr|G7JEQ3|G7JEQ3_MEDTR Inner membrane transport
protein OS=Medicago truncatula GN=MTR_4g049640 PE=4
,72.75,0,C4dic_mal_tran,C4-dicarboxylate transporter/malic acid
transport protein; seg,NULL; SUBFAMILY NOT NA,CUFF.44970.1
         (385 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62280.1 | Symbols: SLAH1 | SLAC1 homologue 1 | chr1:23007309...   325   3e-89
AT1G62262.1 | Symbols: SLAH4 | SLAC1 homologue 4 | chr1:23000318...   320   8e-88
AT1G12480.1 | Symbols: OZS1, SLAC1, RCD3, CDI3 | C4-dicarboxylat...   207   9e-54
AT5G24030.1 | Symbols: SLAH3 | SLAC1 homologue 3 | chr5:8118618-...   188   6e-48
AT4G27970.1 | Symbols: SLAH2 | SLAC1 homologue 2 | chr4:13918290...   187   1e-47

>AT1G62280.1 | Symbols: SLAH1 | SLAC1 homologue 1 |
           chr1:23007309-23008540 REVERSE LENGTH=385
          Length = 385

 Score =  325 bits (834), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 171/325 (52%), Positives = 219/325 (67%), Gaps = 4/325 (1%)

Query: 11  PQTHIALPIVIDIPVTKTQSHNHNKSQIHVQSSSILSQIHAGYFRISLALSSQALLWKVL 70
           P+  I + I   IP +K        ++  V  S+ L  +HAGYFRISL+L SQALLWK++
Sbjct: 4   PRQEIHIEIDNSIPSSKEFKTGLADAKPVVLMSA-LRSLHAGYFRISLSLCSQALLWKIM 62

Query: 71  IEPIEDAHALRKIFSFIPSTAFTFLWYLALFTLVTLSFLYVLRCVFHFDMVKDEFLSHVG 130
           I P  ++ ++  + S +PS AF  LWYLAL T V+L FLY L+C+F FD VK+EFL ++G
Sbjct: 63  IAP--ESPSMSHMHSKLPSMAFHLLWYLALVTQVSLCFLYALKCIFFFDKVKEEFLHYIG 120

Query: 131 VNYLFAPWISCLLLLESSPFVPSNSLSHRVLWCVFVTPVVVLDVKIYGQWFTKGKRFLSA 190
           VNYL+AP IS LL+L+S+P +  NS+ ++ L+ +F  PV+ LD+K+YGQWFT  KRFLS 
Sbjct: 121 VNYLYAPSISWLLMLQSAPMMEPNSVLYQTLFWIFAVPVLTLDIKLYGQWFTTEKRFLSM 180

Query: 191 VANPTSQLSVIGNLVGARVAAEMGWKESAICLFSLGISHYLVLFVTLYQRLPGNDNSXXX 250
           +ANP SQ+SVI NLV AR AAEMGW E A+C+FSLG+ HYLV+FVTLYQRLPG +N    
Sbjct: 181 LANPASQVSVIANLVAARGAAEMGWNECALCMFSLGMVHYLVIFVTLYQRLPGGNN-FPA 239

Query: 251 XXXXXXXXXXXXXSVASLAWRSISDEFDTASKXXXXXXXXXXXXXVSRPLLFKKSMKKFN 310
                        ++ASLAW SI   FD  +K             V RP LFKKSMK+FN
Sbjct: 240 KLRPIFFLFVAAPAMASLAWNSICGTFDAVAKMLFFLSLFIFMSLVCRPNLFKKSMKRFN 299

Query: 311 VAWWAYSFPLTALALASAEYAHQVK 335
           VAWWAYSFPLT LAL S +YA +VK
Sbjct: 300 VAWWAYSFPLTFLALDSVQYAQEVK 324


>AT1G62262.1 | Symbols: SLAH4 | SLAC1 homologue 4 |
           chr1:23000318-23001491 REVERSE LENGTH=365
          Length = 365

 Score =  320 bits (821), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 166/318 (52%), Positives = 213/318 (66%), Gaps = 12/318 (3%)

Query: 19  IVIDIPVTKTQSHNHNKSQIH-VQSSSILSQIHAGYFRISLALSSQALLWKVLIEPIEDA 77
           I+ID  +++ +    N +    +   S+LS +HAGYFRISL+L SQALLWK+++      
Sbjct: 10  IMIDNTISRRKERKTNLADAEPIVLMSVLSSLHAGYFRISLSLCSQALLWKIMVH----- 64

Query: 78  HALRKIFSFIPSTAFTFLWYLALFTLVTLSFLYVLRCVFHFDMVKDEFLSHVGVNYLFAP 137
                + S +PS A+  LWYLAL T V+L FLY  +C+F FDMVK+EF  ++GVNYL+AP
Sbjct: 65  -----LHSELPSMAYYLLWYLALATQVSLCFLYAFKCIFLFDMVKEEFSHYIGVNYLYAP 119

Query: 138 WISCLLLLESSPFVPSNSLSHRVLWCVFVTPVVVLDVKIYGQWFTKGKRFLSAVANPTSQ 197
            ISCLLLL+S+P +  +S+ ++ L+ +F  PV+ LD K+YGQWFT  KRFLS +ANP SQ
Sbjct: 120 SISCLLLLQSAPMIEPHSVLYQTLFWIFAVPVLTLDTKLYGQWFTTEKRFLSIMANPASQ 179

Query: 198 LSVIGNLVGARVAAEMGWKESAICLFSLGISHYLVLFVTLYQRLPGNDNSXXXXXXXXXX 257
           +SVI NLV AR AAEMGWKE A+CLFSLG+ HYLV+FVTLYQRLPG +N           
Sbjct: 180 VSVIANLVAARGAAEMGWKECALCLFSLGMVHYLVIFVTLYQRLPGGNN-FPTTLRPVFF 238

Query: 258 XXXXXXSVASLAWRSISDEFDTASKXXXXXXXXXXXXXVSRPLLFKKSMKKFNVAWWAYS 317
                 + ASLAW SI   FDT +K             V RP L KKS+K+FNVAWWAYS
Sbjct: 239 LFFAAPATASLAWNSICGNFDTIAKMLFFLSLFIFISLVCRPNLLKKSIKRFNVAWWAYS 298

Query: 318 FPLTALALASAEYAHQVK 335
           FP+T LAL S +YA +VK
Sbjct: 299 FPITFLALNSVQYAQEVK 316


>AT1G12480.1 | Symbols: OZS1, SLAC1, RCD3, CDI3 | C4-dicarboxylate
           transporter/malic acid transport protein |
           chr1:4257427-4259249 REVERSE LENGTH=556
          Length = 556

 Score =  207 bits (527), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/293 (40%), Positives = 173/293 (59%), Gaps = 13/293 (4%)

Query: 52  GYFRISLALSSQALLWKVLIE-PIEDAHALRKIFSFIPSTAFTFLWYLALFTLVTLSFLY 110
           G F I L LSSQA+LW  L + P  +   +  + + +       +W  +L  LV++SF Y
Sbjct: 191 GCFGICLGLSSQAVLWLALAKSPATNFLHITPLINLV-------VWLFSLVVLVSVSFTY 243

Query: 111 VLRCVFHFDMVKDEFLSHVGVNYLFAPWISCLLLLESSP--FVPSNSLSHRVLWCVFVTP 168
           +L+C+F+F+ VK E+   V VN+ FAPW+ C+ L  S P  F P+    H  +WCVF+ P
Sbjct: 244 ILKCIFYFEAVKREYFHPVRVNFFFAPWVVCMFLAISVPPMFSPNRKYLHPAIWCVFMGP 303

Query: 169 VVVLDVKIYGQWFTKGKRFLSAVANPTSQLSVIGNLVGARVAAEMGWKESAICLFSLGIS 228
              L++KIYGQW + GKR L  VANP+S LSV+GN VGA +A+++GW E A  L+++G +
Sbjct: 304 YFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILASKVGWDEVAKFLWAVGFA 363

Query: 229 HYLVLFVTLYQRLPGNDNSXXXXXXXXXXXXXXXXSVASLAWRSISDEFDTASKXXXXXX 288
           HYLV+FVTLYQRLP ++ +                S AS+AW +I  +FD  S+      
Sbjct: 364 HYLVVFVTLYQRLPTSE-ALPKELHPVYSMFIAAPSAASIAWNTIYGQFDGCSRTCFFIA 422

Query: 289 XXXXXXXVSRPLLFKKSMKKFNVAWWAYSFPLTALALASAEYAHQVKGLTAHA 341
                  V+R   F  +  KF+VAWW+Y+FP+T  ++A+ +YA  V G  + A
Sbjct: 423 LFLYISLVARINFF--TGFKFSVAWWSYTFPMTTASVATIKYAEAVPGYPSRA 473


>AT5G24030.1 | Symbols: SLAH3 | SLAC1 homologue 3 |
           chr5:8118618-8120993 REVERSE LENGTH=635
          Length = 635

 Score =  188 bits (477), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/282 (37%), Positives = 160/282 (56%), Gaps = 10/282 (3%)

Query: 54  FRISLALSSQALLWKVLIEPIEDAHALRKIFSFIPSTAFTFLWYLALFTLVTLSFLYVLR 113
           F + L +SSQA++WK L      A A    F  +P      LW++++  ++T++ +Y+L+
Sbjct: 263 FGMCLGVSSQAIMWKTL------ATAEPTKFLHVPLWINQGLWFISVALILTIATIYLLK 316

Query: 114 CVFHFDMVKDEFLSHVGVNYLFAPWISCLLLLESSPFVPSNSLSHRVLWCVFVTPVVVLD 173
            +  F+ V+ E+   + +N+ FAP+IS L L    P      L H  LW + + P + L+
Sbjct: 317 IILFFEAVRREYYHPIRINFFFAPFISLLFLALGVPPSIITDLPH-FLWYLLMFPFICLE 375

Query: 174 VKIYGQWFTKGKRFLSAVANPTSQLSVIGNLVGARVAAEMGWKESAICLFSLGISHYLVL 233
           +KIYGQW + G+R LS VANPT+ LSV+GN VGA + A MG +E  I  +++G++HYLVL
Sbjct: 376 LKIYGQWMSGGQRRLSRVANPTNHLSVVGNFVGALLGASMGLREGPIFFYAVGMAHYLVL 435

Query: 234 FVTLYQRLPGNDNSXXXXXXXXXXXXXXXXSVASLAWRSISDEFDTASKXXXXXXXXXXX 293
           FVTLYQRLP N+ +                SVAS+AW  ++  FD  SK           
Sbjct: 436 FVTLYQRLPTNE-TLPKDLHPVFFLFVAAPSVASMAWAKVTGSFDYGSKVCYFIAIFLYF 494

Query: 294 XXVSRPLLFKKSMKKFNVAWWAYSFPLTALALASAEYAHQVK 335
               R   F+    KF+++WWAY+FP+T  A+A+  YA  VK
Sbjct: 495 SLAVRINFFRGI--KFSLSWWAYTFPMTGAAIATIRYATVVK 534


>AT4G27970.1 | Symbols: SLAH2 | SLAC1 homologue 2 |
           chr4:13918290-13920122 REVERSE LENGTH=519
          Length = 519

 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 14/286 (4%)

Query: 54  FRISLALSSQALLWKVLIEPIEDAHALRKIFSFIPSTAFTFLWYLALFTLVTLSFLYVLR 113
           + + L +SSQA++WK L      A    + F  +       LW+++L  L+ +S  Y+ +
Sbjct: 148 YGMCLGVSSQAIMWKTL------ATTEAEKFLHVTQVINHVLWWISLLLLLAVSITYLFK 201

Query: 114 CVFHFDMVKDEFLSHVGVNYLFAPWISCLLLLESSPFVPSNSLSH--RVLWCVFVTPVVV 171
            +  F+ V+ EF   + VN+ FAP IS L L      +P + +SH    LW   + P++ 
Sbjct: 202 TILFFEAVRREFRHPIRVNFFFAPLISILFLALG---IPHSIISHLPSTLWYFLMAPILF 258

Query: 172 LDVKIYGQWFTKGKRFLSAVANPTSQLSVIGNLVGARVAAEMGWKESAICLFSLGISHYL 231
           L++KIYGQW + G+R LS VANPT+ LS++GN  GA + A MG KE  I  F++G+++YL
Sbjct: 259 LEMKIYGQWMSGGQRRLSKVANPTNHLSIVGNFAGALLGASMGLKEGPIFFFAIGLAYYL 318

Query: 232 VLFVTLYQRLPGNDNSXXXXXXXXXXXXXXXXSVASLAWRSISDEFDTASKXXXXXXXXX 291
           VLFVTLYQRLP N+ +                +VAS+AW  IS  FD  S+         
Sbjct: 319 VLFVTLYQRLPTNE-TLPKELHPVFFLFVAAPAVASMAWTKISASFDLGSRLAYFISLFL 377

Query: 292 XXXXVSRPLLFKKSMKKFNVAWWAYSFPLTALALASAEYAHQVKGL 337
               V R  LF+    KF++AWWAY+FP+TA+A A+ +Y+ +V G+
Sbjct: 378 YFSLVCRINLFRGF--KFSLAWWAYTFPMTAVASATIKYSDEVTGV 421