Miyakogusa Predicted Gene
- Lj3g3v2920810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2920810.1 Non Chatacterized Hit- tr|I1LU44|I1LU44_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13965
PE,71.6,0,ZF_RING_2,Zinc finger, RING-type;
HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain;,CUFF.45008.1
(900 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 1056 0.0
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 461 e-129
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 350 3e-96
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 349 4e-96
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 347 2e-95
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 312 6e-85
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 295 1e-79
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 291 1e-78
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 234 2e-61
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 219 6e-57
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 215 9e-56
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 198 1e-50
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 149 1e-35
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 116 7e-26
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 116 7e-26
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 109 8e-24
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 108 1e-23
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 107 3e-23
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 103 5e-22
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 96 1e-19
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 96 1e-19
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 95 2e-19
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 95 2e-19
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 95 2e-19
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 95 2e-19
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 95 3e-19
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 95 3e-19
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 95 3e-19
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 92 1e-18
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 90 7e-18
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 89 2e-17
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 88 3e-17
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 87 5e-17
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 87 5e-17
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 87 5e-17
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 86 9e-17
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 86 9e-17
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 86 1e-16
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 86 1e-16
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 84 4e-16
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 83 8e-16
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 83 8e-16
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 83 9e-16
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 83 1e-15
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 81 3e-15
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 81 3e-15
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 80 5e-15
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 74 3e-13
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 74 3e-13
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 74 3e-13
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 74 3e-13
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 66 1e-10
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 65 2e-10
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 61 4e-09
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 60 5e-09
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 60 8e-09
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 55 2e-07
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 54 5e-07
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/758 (67%), Positives = 594/758 (78%), Gaps = 36/758 (4%)
Query: 161 LLLWHAWEDEQERWITENLSEDVDLDQHSELMNESAEAPSDLTMPLLRYQREWLAWALKQ 220
+LLW WE EQ WI E++SEDVDLDQH+ ++ E+AE PSDL MPLLRYQ+E+LAWA KQ
Sbjct: 94 VLLWETWEKEQNSWIDEHMSEDVDLDQHNAVIAETAEPPSDLIMPLLRYQKEFLAWATKQ 153
Query: 221 ESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGCEPDEPSASPGSSRVLPLIKATLV 280
E S GGILADEMGMGKTIQAI+LVLA+RE D + TLV
Sbjct: 154 EQSVA-GGILADEMGMGKTIQAISLVLARREV-------DRAQFGEAAG-------CTLV 198
Query: 281 ICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRKH 340
+CP+VAV+QW+NEI RFT GSTKVLVYHGAKR K+ + F YDFV+TTYS VESEYR++
Sbjct: 199 LCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIKEFMNYDFVLTTYSTVESEYRRN 258
Query: 341 MMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLKEPRIT 400
+MP K +C YC K FY KL H YFCGP+A+KT KQSKQ RKK D+ +++ KE
Sbjct: 259 IMPSKVQCAYCSKSFYPKKLVIHLRYFCGPSAVKTAKQSKQKRKKTSDSSSQQGKEADAG 318
Query: 401 NE--------------DSDAVG---QEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLA 443
+ + D +G +EKS LH+VKW+RIILDEAHYIK R NTA+AV A
Sbjct: 319 EDKKLKKSKKKTKQTVEKDQLGSDDKEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFA 378
Query: 444 LESSYRWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXX 503
LE++YRWALSGTPLQNRVGELYSL+RFLQI PYSYY CKDCDCR LD
Sbjct: 379 LEATYRWALSGTPLQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHN 438
Query: 504 XVRHFCWWNKYIATPIQSYGCGDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPRIV 563
VRHFCWWNKY+A PI YG GKRAMILLK+K+LK I+LRRTKLGRAADLALPPRI+
Sbjct: 439 AVRHFCWWNKYVAKPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRII 498
Query: 564 SLRRDSLDIKEQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVV 623
+LRRD+LD+KE DYYESLY SQA+FNTYI+A TLMNNYAHIFDLLTRLRQAVDHPYLVV
Sbjct: 499 TLRRDTLDVKEFDYYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVV 558
Query: 624 YSPSAASKVGNLASNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISC 683
YS S+ + + N + EQ CGLCHD ED VVTSC H FCK CLI FS+SL +++C
Sbjct: 559 YSNSSGANANLVDENKS---EQECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGKVTC 615
Query: 684 PSCSKLLTVDLKSNKDLVVN-TKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIRFMV 742
P+CSKLLTVD + D +KTT+KGFR+SSILNRI+L++FQTSTKIEALREEIRFMV
Sbjct: 616 PTCSKLLTVDWTTKADTEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMV 675
Query: 743 ESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIF 802
E DGSAK IVFSQFTSFLDLINY+L K GV+CVQL GSMT+AARD AI +F +DPDCR+F
Sbjct: 676 ERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVF 735
Query: 803 LMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEE 862
LMSLKAGG+ALNLTVASHVF+MDPWWNPAVERQAQDRIHRIGQYKPIR+VRF+IENT+EE
Sbjct: 736 LMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEE 795
Query: 863 RILKLQEKKELVFEGTVGGSSEALGKLTEADLRFLFVT 900
RIL+LQ+KKELVFEGTVGGS EA+GKLTE D+RFLF T
Sbjct: 796 RILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLFTT 833
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/508 (50%), Positives = 321/508 (63%), Gaps = 81/508 (15%)
Query: 397 PRITNE--DSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSG 454
P + NE + V + S LH++KW+RII+DEAH IK+R TAKAV ALE++YRWALSG
Sbjct: 245 PIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSG 304
Query: 455 TPLQNRVGELYSLVR--FLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWN 512
TPLQN V ELYSLV FL YS Y F + +
Sbjct: 305 TPLQNDVDELYSLVSYSFLNFF-YSTYAS--------------------------FAFRH 337
Query: 513 KYIATPIQSYGCGDSGKRAMILLKNKILK-SIVLRRTKLGRAADLALPPRIVSLRRDSLD 571
+I ++ + K L+ IL SI +R + + + + RRD+L
Sbjct: 338 THI-----TFARNVTVK---FLIGGNILPLSIPVRIENVPAVLIMQINTSLGGKRRDALS 389
Query: 572 IKEQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPSAASK 631
+ E D+YESLY S+ F+ YIQA TLMNNYAHIF LL RLRQAVDHPYLV YS + +
Sbjct: 390 VVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSYSSPSGAN 449
Query: 632 VGNLASNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISCPSCSKLLT 691
L +N N E+ CG HD +D VTS EH
Sbjct: 450 ANLLDANKN---EKECGFGHDPSKDYFVTSSEHQ-------------------------- 480
Query: 692 VDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIRFMVESDGSAKGI 751
+KT +KGFR+SSILNRI L++F+TSTKIEALREEIRFMVE D SAK I
Sbjct: 481 -----------ASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAI 529
Query: 752 VFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGGI 811
VFSQFTSFLDLI+Y+L KSGV+CVQL GSM+ AA+DAA+K F ++PDCR+ LMSL+AGG+
Sbjct: 530 VFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQAGGV 589
Query: 812 ALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKK 871
ALNLT ASHVF+MDPWWNPAVERQAQDRIHRIGQ KP+R+VRF++E T+EE+IL LQ+KK
Sbjct: 590 ALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKK 649
Query: 872 ELVFEGTVGGSSEA-LGKLTEADLRFLF 898
E +FE T+G S EA + KL E D++ LF
Sbjct: 650 EDLFESTLGDSEEAVVQKLGEDDIKSLF 677
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 111/161 (68%), Gaps = 14/161 (8%)
Query: 179 LSEDVDLDQHSELMNESAEAPSDLTMPLLRYQREWLAWALKQESSATRGGILADEMGMGK 238
++ED D D+ + ++ E+AE P DL +PLL+YQ+E+LAWA QE SA RGGILADEMGMGK
Sbjct: 107 MTEDDDFDEQNAVIAEAAEQPLDLIIPLLKYQKEFLAWATIQELSAVRGGILADEMGMGK 166
Query: 239 TIQAIALVLAKREFYPIGCEPDEPSASPGSSRVLPLIKATLVICPVVAVTQWVNEINRFT 298
TIQAI+LVLA+RE ++ + TLV+ P VA++QW++EI+R T
Sbjct: 167 TIQAISLVLARREV--------------DRAKSREAVGHTLVLVPPVALSQWLDEISRLT 212
Query: 299 LKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRK 339
GST+VL YHG KR K+ + YDFV+TT IVE+EYRK
Sbjct: 213 SPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEYRK 253
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 256/791 (32%), Positives = 384/791 (48%), Gaps = 158/791 (19%)
Query: 202 LTMPLLRYQREWLAWALKQESSA--TRGGILADEMGMGKTIQAIALVL------------ 247
LT+PLLR+QR L+W ++E+S GGILAD+ G+GKT+ IAL+L
Sbjct: 552 LTVPLLRHQRIALSWMAQKETSGFPCSGGILADDQGLGKTVSTIALILKERSKPAQACEE 611
Query: 248 -AKREFYPIG-----CEPDEPSA--------------------SPGSSRVLPLIKATLVI 281
K+E + + C P +PS S G P TLV+
Sbjct: 612 STKKEIFDLESETGECAPLKPSGRSKHFEHSQLLSNENKVGGDSVGKVTGRP-AAGTLVV 670
Query: 282 CPVVAVTQWVNEINR-FTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRKH 340
CP + QW +E+++ T + + VLVYHG+ R K +YD V+TT+SIV E K
Sbjct: 671 CPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQ 730
Query: 341 MMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLKEPRIT 400
+ + G H+ + T FC S + RK D+ K K+ ++
Sbjct: 731 PLVDDEDEEKDG---VHDGGT-AATGFC----------SNKKRKYPPDSKKKGSKKKKV- 775
Query: 401 NEDSDAVGQEKSFLHA----VKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTP 456
FL V W R++LDEA IK+ A+A L + RW LSGTP
Sbjct: 776 -----------EFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTP 824
Query: 457 LQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIA 516
+QN + +LYS RFL+ PYS Y+ C T+ N
Sbjct: 825 IQNSIDDLYSYFRFLKYDPYSSYVLF---CSTIK---------------------NPITR 860
Query: 517 TPIQSYGCGDSGKRAMILLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDSLDIK 573
P++ Y ILK+++LRRTK L ++LPP+ + LR+ ++
Sbjct: 861 NPVKGY-----------QKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFTVE 909
Query: 574 EQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLV--VYSPSAASK 631
E+D+Y L ES+ QF Y +A T+ NY +I +L RLRQA DHP LV YS + S
Sbjct: 910 ERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNGEYSFTWESS 969
Query: 632 VGNLASNGNGNVEQA-CGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISCP--SCSK 688
VG + A CG+C+DA ED V + C H FCK C+ + + + CP +C+
Sbjct: 970 VGLAKKQIQSDASLAICGICNDAPEDAVASVCGHVFCKQCIYERLTG-DSNHCPFANCNV 1028
Query: 689 LLTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQ-TSTKIEALREEIRFM------ 741
LT+ S+K + + ++ +S+ L+ E+ S+KI+A E ++ +
Sbjct: 1029 RLTISSLSSKTRLDDAMPDMQERATSNSLSPCSDEDLPYGSSKIKAALEILQSLPKAHDL 1088
Query: 742 -------------------VESDGSA----------KGIVFSQFTSFLDLINYSLNKSGV 772
V+++G + K IVFSQ+T L+L+ SL S +
Sbjct: 1089 TDSNQISENREYSGLSITPVKNEGMSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHI 1148
Query: 773 NCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAV 832
+L+G+M++AARD A++ F P+ + +MSLKA + LN+ A HV ++D WWNP
Sbjct: 1149 QYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTT 1208
Query: 833 ERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVG----GSSEALGK 888
E QA DR HRIGQ +P+ +VRF +++T+E+RIL LQ+KK ++ G GS ++
Sbjct: 1209 EDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQQKKRMMVASAFGEDEKGSRQS--H 1266
Query: 889 LTEADLRFLFV 899
LT DL +LF+
Sbjct: 1267 LTVEDLSYLFM 1277
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 349 bits (896), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 256/791 (32%), Positives = 384/791 (48%), Gaps = 158/791 (19%)
Query: 202 LTMPLLRYQREWLAWALKQESSA--TRGGILADEMGMGKTIQAIALVL------------ 247
LT+PLLR+QR L+W ++E+S GGILAD+ G+GKT+ IAL+L
Sbjct: 394 LTVPLLRHQRIALSWMAQKETSGFPCSGGILADDQGLGKTVSTIALILKERSKPAQACEE 453
Query: 248 -AKREFYPIG-----CEPDEPSA--------------------SPGSSRVLPLIKATLVI 281
K+E + + C P +PS S G P TLV+
Sbjct: 454 STKKEIFDLESETGECAPLKPSGRSKHFEHSQLLSNENKVGGDSVGKVTGRP-AAGTLVV 512
Query: 282 CPVVAVTQWVNEINR-FTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRKH 340
CP + QW +E+++ T + + VLVYHG+ R K +YD V+TT+SIV E K
Sbjct: 513 CPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQ 572
Query: 341 MMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLKEPRIT 400
+ + G H+ + T FC S + RK D+ K K+ ++
Sbjct: 573 PLVDDEDEEKDG---VHDGGT-AATGFC----------SNKKRKYPPDSKKKGSKKKKV- 617
Query: 401 NEDSDAVGQEKSFLHA----VKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTP 456
FL V W R++LDEA IK+ A+A L + RW LSGTP
Sbjct: 618 -----------EFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTP 666
Query: 457 LQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIA 516
+QN + +LYS RFL+ PYS Y+ C T+ N
Sbjct: 667 IQNSIDDLYSYFRFLKYDPYSSYVLF---CSTIK---------------------NPITR 702
Query: 517 TPIQSYGCGDSGKRAMILLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDSLDIK 573
P++ Y ILK+++LRRTK L ++LPP+ + LR+ ++
Sbjct: 703 NPVKGYQ-----------KLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFTVE 751
Query: 574 EQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLV--VYSPSAASK 631
E+D+Y L ES+ QF Y +A T+ NY +I +L RLRQA DHP LV YS + S
Sbjct: 752 ERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNGEYSFTWESS 811
Query: 632 VGNLASNGNGNVEQA-CGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISCP--SCSK 688
VG + A CG+C+DA ED V + C H FCK C+ + + + CP +C+
Sbjct: 812 VGLAKKQIQSDASLAICGICNDAPEDAVASVCGHVFCKQCIYERLTG-DSNHCPFANCNV 870
Query: 689 LLTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQ-TSTKIEALREEIRFM------ 741
LT+ S+K + + ++ +S+ L+ E+ S+KI+A E ++ +
Sbjct: 871 RLTISSLSSKTRLDDAMPDMQERATSNSLSPCSDEDLPYGSSKIKAALEILQSLPKAHDL 930
Query: 742 -------------------VESDGSA----------KGIVFSQFTSFLDLINYSLNKSGV 772
V+++G + K IVFSQ+T L+L+ SL S +
Sbjct: 931 TDSNQISENREYSGLSITPVKNEGMSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHI 990
Query: 773 NCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAV 832
+L+G+M++AARD A++ F P+ + +MSLKA + LN+ A HV ++D WWNP
Sbjct: 991 QYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTT 1050
Query: 833 ERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVG----GSSEALGK 888
E QA DR HRIGQ +P+ +VRF +++T+E+RIL LQ+KK ++ G GS ++
Sbjct: 1051 EDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQQKKRMMVASAFGEDEKGSRQS--H 1108
Query: 889 LTEADLRFLFV 899
LT DL +LF+
Sbjct: 1109 LTVEDLSYLFM 1119
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 256/820 (31%), Positives = 380/820 (46%), Gaps = 183/820 (22%)
Query: 202 LTMPLLRYQREWLAWALKQESSATR--GGILADEMGMGKTIQAIALVL------------ 247
L++PL+++Q+ LAW ++E+++ GGILAD+ G+GKT+ IAL+L
Sbjct: 222 LSVPLMKHQKIALAWMFQKETNSLHCMGGILADDQGLGKTVSTIALILKQMHEAKLKSKN 281
Query: 248 -AKREFYPIGCEPDEPS----------ASPGS-----------------------SRVLP 273
+E + + D+ S AS GS +R P
Sbjct: 282 SGNQEAEALDLDADDESENAFEKPESKASNGSGVNGDSGIKKAKGEEASTSTRKFNRKRP 341
Query: 274 LIKATLVICPVVAVTQWVNEIN-RFTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSI 332
TL++CP V QW E++ + T + VL+YHG R K +YD V+TTY+I
Sbjct: 342 -AAGTLIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAI 400
Query: 333 VESEYRKHMMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTK 392
V +E K + + Y F S ++K + TK
Sbjct: 401 VSNEVPKQPLVDDDENDEKNSEKYGLASGF----------------SINKKRKNVVGTTK 444
Query: 393 KLKEPRITNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWAL 452
K K+ + N D+ + L V W R++LDEA IK+ A+A L + RW L
Sbjct: 445 KSKKKKGNNNAGDSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCL 504
Query: 453 SGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWN 512
SGTP+QN + +LYS RFL+ PY+ Y + FC
Sbjct: 505 SGTPIQNTIDDLYSYFRFLKYDPYAVY--------------------------KSFC--- 535
Query: 513 KYIATPIQSYGCGDSGKRAMILLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDS 569
I PI G + + +L++I+LRRTK L + LPP+ ++L +
Sbjct: 536 HQIKGPISRNSL--QGYKKL----QAVLRAIMLRRTKGTLLDGQPIINLPPKTINLSQVD 589
Query: 570 LDIKEQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVV-YSPSA 628
++E+ +Y L ++S++QF Y A TL NYA+I +L RLRQA DHP LV Y+ +
Sbjct: 590 FSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVKRYNSDS 649
Query: 629 ASKVGNLASN-----------GNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSS 677
KV A C +CHD EDPVVT C H FC C+ D+ +
Sbjct: 650 VGKVSEEAVKKLPKEDLVSLLSRLESSPICCVCHDPPEDPVVTLCGHIFCYQCVSDYITG 709
Query: 678 LEQISCPS--CSKLLTVDLKSNKDLVVNTKTTIKGFR------SSSILNRIQLENFQ--- 726
E +CP+ C + L D VV +K+T++ SSS N FQ
Sbjct: 710 DED-TCPAPRCREQLAHD-------VVFSKSTLRSCVADDLGCSSSEDNSHDKSVFQNGE 761
Query: 727 -TSTKIEAL-------------------------------------------REEIRFMV 742
+S+KI+A+ + ++
Sbjct: 762 FSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTP 821
Query: 743 ESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIF 802
+ G K I+FSQ+T LDL+ SL ++ + +L+G+M+L ARD A+K F++DPD ++
Sbjct: 822 SNGGPIKTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVM 881
Query: 803 LMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEE 862
+MSLKAG + LN+ A HV L+D WWNP E QA DR HRIGQ +P+ + R I+NT+E+
Sbjct: 882 IMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVED 941
Query: 863 RILKLQEKKELVFEGTVG---GSSEALGKLTEADLRFLFV 899
RIL LQE+K + G G S A +LT DL++LF+
Sbjct: 942 RILALQEEKRKMVASAFGEDHGGSSAT-RLTVDDLKYLFM 980
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 312 bits (800), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 221/685 (32%), Positives = 327/685 (47%), Gaps = 115/685 (16%)
Query: 277 ATLVICPVVAVTQWVNEIN-RFTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVES 335
TL++CP V QW E++ + + + VLVYHG+ R K EYD V+TTY+IV +
Sbjct: 415 GTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTN 474
Query: 336 EYRKHMMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLK 395
E + + + Y F ++K ++ RK D +
Sbjct: 475 EAPNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSS---- 530
Query: 396 EPRITNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGT 455
EP D +G+ V W RI+LDEA IK+ A++ L + RW LSGT
Sbjct: 531 EP-----DCGPLGK-------VGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGT 578
Query: 456 PLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYI 515
P+QN + +LYS RFL+ PY+ Y + I
Sbjct: 579 PIQNTIDDLYSYFRFLRYDPYAVYKS-----------------------------FYSTI 609
Query: 516 ATPIQSYGCGDSGKRAMILLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDSLDI 572
PI C G + + +L++I+LRRTK L + LPP++V+L + +
Sbjct: 610 KVPISRNSC--QGYKKL----QAVLRAIMLRRTKGTLLDGKPIINLPPKVVNLSQVDFSV 663
Query: 573 KEQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVV-YSPSAASK 631
E+ +Y+ L +S++QF Y A TL NYA+I LL RLRQA DHP LV Y+ K
Sbjct: 664 AERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLVKRYNSDPVGK 723
Query: 632 VGNLAS------------NGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLE 679
V A N + C C++ E PVVT C H FC C++++ + E
Sbjct: 724 VSEAAVRRLPREARSRLINRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDE 783
Query: 680 QI-SCPSCSKLLTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQT----STKIEAL 734
P C + L D+ ++ + N + G SSS N + FQ S+KI+A+
Sbjct: 784 NTCPVPRCKQQLARDVVFSESSLRNCTSDDSGC-SSSHDNGLDRSVFQKRDFCSSKIKAV 842
Query: 735 REEIRFMVESD-------------------------------------GSAKGIVFSQFT 757
+ ++ + + D G+ K I+FSQ+T
Sbjct: 843 LDILQSLSQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWT 902
Query: 758 SFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTV 817
LDL+ + +SG+ +L+G+M+LAARD A+K F+ PD ++ LMSLKAG + LN+
Sbjct: 903 GMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVA 962
Query: 818 ASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEG 877
A HV L+D WWNP E QA DR HRIGQ +P+ + R I++T+E+RILKLQE+K +
Sbjct: 963 ACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQEEKRTMVAS 1022
Query: 878 TVG---GSSEALGKLTEADLRFLFV 899
G G S A +LT DL++LF+
Sbjct: 1023 AFGEEHGGSSAT-RLTVDDLKYLFM 1046
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 192 MNESAEAPSDLTMPLLRYQREWLAWALKQESSATR--GGILADEMGMGKTIQAIALVLAK 249
M ES P L++PL+R+Q+ LAW ++E+S+ GGILAD+ G+GKT+ IAL+L +
Sbjct: 267 MTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPGGILADDQGLGKTVSTIALILKQ 326
Query: 250 R 250
+
Sbjct: 327 K 327
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 266/519 (51%), Gaps = 83/519 (15%)
Query: 412 SFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFL 471
S H + W RI+LDEAH IKS AKA L S RW L+GTPLQN++ +LYSL+ FL
Sbjct: 809 SIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFL 868
Query: 472 QIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGKRA 531
+ P+ ++ WW+K I P Y GD R
Sbjct: 869 HVEPWC-----------------------------NWAWWSKLIQKP---YENGDP--RG 894
Query: 532 MILLKNKILKSIVLRRTKLGRAAD----LALPPRIVSLRRDSLDIKEQDYYESLYNESQA 587
+ L+K IL+ ++LRRTK R + L LPP V + E+D+Y +L+ S+
Sbjct: 895 LKLIK-AILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKV 953
Query: 588 QFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVVY----------------------- 624
QF+ ++ +++NYA+I +LL RLRQ +HP+LV+
Sbjct: 954 QFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPD 1013
Query: 625 -----SPSAASKVGNLASNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLE 679
+PS A + +GN ++ C +C ++ +DPV+T C H C+ CL+ S
Sbjct: 1014 SVSQNAPSRAYIEEVIQDLRDGNSKE-CPICLESADDPVLTPCAHRMCRECLLTSWRSPS 1072
Query: 680 QISCPSCSKLLTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIR 739
CP C +L +T + + SI ++N++ S+K+ L + +
Sbjct: 1073 CGLCPICRTIL-------------KRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLE 1119
Query: 740 FMVESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDC 799
+ +S K IVFSQ+TSFLDL+ L + G ++ +G + R+ +K F +
Sbjct: 1120 KIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQK 1179
Query: 800 RIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENT 859
I LMSLKAGG+ LNLT AS VFLMDPWWNPAVE QA RIHRIGQ + + + RF++++T
Sbjct: 1180 TILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDT 1239
Query: 860 IEERILKLQEKKELVFEGTVGGSSEALGKLTEADLRFLF 898
+EER+ ++Q +K+ + G + +L E L+ LF
Sbjct: 1240 VEERMQQVQARKQRMIAGALTDEEVRSARLEE--LKMLF 1276
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 18/130 (13%)
Query: 226 RGGILADEMGMGKTIQAIALVLAKREFYPIGCEPDEPS---ASPGSSR--------VLPL 274
RGGILAD MG+GKT+ IAL+LA+ P P+ A + + L
Sbjct: 681 RGGILADAMGLGKTVMTIALILAR----PGRGNPENEDVLVADVNADKRNRKEIHMALTT 736
Query: 275 IKA---TLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYS 331
+KA TL+ICP+ ++QW +E+ + + VLVY+G R + +D V+TTY
Sbjct: 737 VKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYG 796
Query: 332 IVESEYRKHM 341
++ S Y++ M
Sbjct: 797 VLTSAYKQDM 806
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 284/539 (52%), Gaps = 94/539 (17%)
Query: 399 ITNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQ 458
+T+E S + ++AV+W RI+LDEAH IK+ + A AL + RW L+GTP+Q
Sbjct: 547 LTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQ 606
Query: 459 NRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATP 518
N + +LYSL+RFL+I P+ + WWNK + P
Sbjct: 607 NNLEDLYSLLRFLRIEPWGTW-----------------------------AWWNKLVQKP 637
Query: 519 IQSYGCGDSGKRAMILLKNKILKSIVLRRTKL-----GRAADLALPPRIVSLRRDSLDIK 573
+ GD +R + L+++ ILK I+LRRTK GR L LPP + L
Sbjct: 638 FEE---GD--ERGLKLVQS-ILKPIMLRRTKSSTDREGRPI-LVLPPADARVIYCELSES 690
Query: 574 EQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPSAA---- 629
E+D+Y++L+ S+ +F+ +++ +++NYA I +LL RLRQ DHP+LV+ A
Sbjct: 691 ERDFYDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSD 750
Query: 630 ----------SKVGNLASNGNGNVEQA----------------CGLCHDAVEDPVVTSCE 663
K L G +A C +C +A+ED V+T C
Sbjct: 751 LNKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCA 810
Query: 664 HTFCKGCLIDFSSSLEQISCPSCSKLLTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLE 723
H C+ CL+ + CP C + S ++L+ ++ +R Q++
Sbjct: 811 HRLCRECLLASWRNSTSGLCPVCRNTV-----SKQELI-----------TAPTESRFQVD 854
Query: 724 ---NFQTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGS 780
N+ S+KI AL EE+ + S GS K I+FSQ+T+FLDL+ L+++ + V+L+G+
Sbjct: 855 VEKNWVESSKITALLEELEGL-RSSGS-KSILFSQWTAFLDLLQIPLSRNNFSFVRLDGT 912
Query: 781 MTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRI 840
++ R+ +K F++D + LMSLKAGG+ +NLT AS+ F+MDPWWNPAVE QA RI
Sbjct: 913 LSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRI 972
Query: 841 HRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLRFLFV 899
HRIGQ K ++I RF+++ T+EER+ +Q +K+ + G + ++ E L+ LF
Sbjct: 973 HRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSARIEE--LKMLFT 1029
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 226 RGGILADEMGMGKTIQAIALVLA------KREFYPIGCEPDEPSASPGSSRVLPLIKAT- 278
RGGILAD MG+GKT+ I+L+LA F E D+ +S P +KAT
Sbjct: 413 RGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATK 472
Query: 279 --------------------LVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSGE 318
L++CP+ + QW EI GS V V++G R K +
Sbjct: 473 FLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAK 532
Query: 319 HFGEYDFVITTYSIVESEYRKH 340
+ D VITTY ++ SE+ +
Sbjct: 533 LLSQSDVVITTYGVLTSEFSQE 554
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 201/700 (28%), Positives = 299/700 (42%), Gaps = 175/700 (25%)
Query: 199 PSDLTMPLLRYQREWLAWALKQE--SSATRGGILADEMGMGKTIQAIALVLAKREFYPIG 256
P LT+PL+R+Q+ L W K+E S GGILAD+ G+GKTI I+L+L ++
Sbjct: 46 PGVLTVPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKL----- 100
Query: 257 CEPDEPSASPGSSRVLPLIKATLVICPVVAVTQWVNEIN-RFTLKGSTKVLVYHGAKRGK 315
S S R TL++CP V QW E+ + + + VLV+HG+ R K
Sbjct: 101 -----KSQSKQRKRKGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTK 155
Query: 316 SGEHFGEYDFVITTYSIVESEYRKHMMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKT 375
YD V+TTY+IV +E ++ M
Sbjct: 156 DPTEIAIYDVVMTTYAIVTNEVPQNPM--------------------------------L 183
Query: 376 EKQSKQSRKKELDAFTKKLKEPRITNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHC 435
+ ++ LD + L +P + A+G+ V+W R++LDEAH IK+
Sbjct: 184 NRYDSMRGRESLDGSS--LIQPHV-----GALGR-------VRWLRVVLDEAHTIKNHRT 229
Query: 436 NTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXX 495
AKA +L + RW L+GTP++N+V +LYS RFL+ PY+ +C
Sbjct: 230 LIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYA--MCNS------------ 275
Query: 496 XXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGKRAMILLKNKILKSIVLRRTKLGRAAD 555
+++ I PI K IL+ I+LRRTK
Sbjct: 276 ---------------FHQRIKAPIDKKPLHGYKKL------QAILRGIMLRRTK------ 308
Query: 556 LALPPRIVSLRRDSLDIKEQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQA 615
E +Y L S+ +F Y TL + A++ +L RLRQA
Sbjct: 309 ------------------EWSFYRKLELNSRWKFEEYAADGTLHEHMAYLLVMLLRLRQA 350
Query: 616 VDHPYLVV-YSPSAASKVGN----LASNGNGNV--------EQACGLCHDAVEDPVVTSC 662
+HP LV YS S ++ + +A N + C +C D +DPVVT C
Sbjct: 351 CNHPQLVNGYSHSDTTRKMSDGVRVAPRENLIMFLDLLKLSSTTCSVCSDPPKDPVVTLC 410
Query: 663 EHTFCKGCLIDFSSSLEQISCPS--CSKLLTVDLKSNKDLVVNTKTTIKGFRSSSILNRI 720
H FC C + + + + +CP+ C L D VV T++ ++ S +N
Sbjct: 411 GHVFCYEC-VSVNINGDNNTCPALNCHSQLKHD-------VVFTESAVR-----SCIND- 456
Query: 721 QLENFQTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGS 780
+ +V S+ F++ N S ++ + S
Sbjct: 457 ---------------------YDDPEDKNALVASRRVYFIE--NPSCDRDSSVACRARQS 493
Query: 781 MTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRI 840
+D +I C LMSLKAG + LN+ ASHV L+D WWNP E QA DR
Sbjct: 494 RHSTNKDNSISGLV----C-AMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRA 548
Query: 841 HRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVG 880
HRIGQ + + + R I+NT+EERIL L E+K + +G
Sbjct: 549 HRIGQTRAVTVTRIAIKNTVEERILTLHERKRNIVASALG 588
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 219 bits (559), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 233/479 (48%), Gaps = 64/479 (13%)
Query: 410 EKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVR 469
E S + ++W RIILDEAH IK+ + ++ V L++S RWA++GTP+QN +LYSL+
Sbjct: 403 EDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMA 462
Query: 470 FLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGK 529
FL+ P+S +W I P+ G K
Sbjct: 463 FLRFEPFSIK-----------------------------SYWQSLIQRPL-----GQGNK 488
Query: 530 RAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQF 589
+ + L+ ++ +I LRRTK + + LPP+ V L +E+ Y+ + E++
Sbjct: 489 KGLSRLQ-VLMATISLRRTK--EKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVV 545
Query: 590 NTYIQANTLMNNYAHIFDLLTRLRQAVDH-----PYLVVYSPSAASK--------VGNLA 636
I +LM NY+ + ++ RLRQ D P L ++ S + + + L
Sbjct: 546 QNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLV 605
Query: 637 SNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISCPSCSKLLTVDLKS 696
+ + C +C + ++T C H FC+ C++ + + CP C LT
Sbjct: 606 AALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPL-CPLCRGSLTQSDLY 664
Query: 697 NKDLVVNTKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIRFMVESDGSAKGIVFSQF 756
N + G + S S+K+ AL + + + + K +VFSQF
Sbjct: 665 NAPPPPPDSSNTDGEDAKSS---------TKSSKVSALLSLLMASRQENPNTKSVVFSQF 715
Query: 757 TSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR---IFLMSLKAGGIAL 813
L L+ L +G ++L+G+MT+ R I F +P+ + L SLKA G +
Sbjct: 716 RKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF-GNPELTGPVVLLASLKASGTGI 774
Query: 814 NLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKE 872
NLT AS V+L DPWWNPAVE QA DRIHRIGQ + ++++R + N+IEER+L+LQ+KK+
Sbjct: 775 NLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKK 833
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 60/222 (27%)
Query: 185 LDQHSELMNE--SAEAPSDLTMP-LLRYQREWLAWALKQESSAT---------------- 225
+D++ +LM + +AE P ++ L +Q+E L W L +E S
Sbjct: 188 VDENVKLMGKLVAAEPPREVIKSELFAHQKEGLGWLLHREKSGELPPFWEEKDGEFLNTL 247
Query: 226 ------------RGGILADEMGMGKTIQAIALVLAKREFYPIGCEP-DEPSASPG----- 267
RGG+ AD+MG+GKT+ ++L+ R P +EP G
Sbjct: 248 TNYRSDKRPDPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEK 307
Query: 268 --------------------SSRVLPL---IKATLVICPVVAVTQWVNEINRFTLKGSTK 304
+ V+ + K TL++CP ++ W+ ++ T+ G K
Sbjct: 308 KGKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILK 367
Query: 305 VLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRKHMMPPKK 346
V +YHG +R +YD V+TTY + E P KK
Sbjct: 368 VYMYHGGERTDDVNELMKYDIVLTTYGTLAVEESWEDSPVKK 409
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 215 bits (548), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 240/527 (45%), Gaps = 97/527 (18%)
Query: 184 DLDQHSELMNESAEAPSD--LTMPLLRYQREWLAWALKQESSATR--GGILADEMGMGKT 239
DL QHS S +P D L + LLR+QR L+W ++E+S GGILAD+ G+GKT
Sbjct: 522 DLSQHS-----SEASPPDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKT 576
Query: 240 IQAIALVLAKREFYPIGCEPDEPSASPGSSRVLPLI-------------------KATLV 280
+ IAL+L +R + CE D + S ++ TL+
Sbjct: 577 VSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLI 636
Query: 281 ICPVVAVTQWVNEI-NRFTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRK 339
+CP + QW +E+ + TL+ VLVYHG R K +YD VITTYS+V E K
Sbjct: 637 VCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVITTYSLVSVEVPK 696
Query: 340 HMMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLKEPRI 399
P+ + K H E S KK+L KK + R
Sbjct: 697 Q---PRDRAD-------EEKGGIHDG--------GVESVGFGSNKKDLPNSQKKGTKKR- 737
Query: 400 TNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQN 459
+ D + V L V W R++LDEA IK+ + A L + RW LSGTP+QN
Sbjct: 738 KHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQN 797
Query: 460 RVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPI 519
+ +LYS RFL+ PYS Y + FC + I PI
Sbjct: 798 SIADLYSYFRFLKYDPYSSY--------------------------QTFC---ETIKNPI 828
Query: 520 QSYGCGDSGKRAMILLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDSLDIKEQD 576
SY G+ L ILK ++LRRTK L ++LPP+ + LRR +E+D
Sbjct: 829 SSY----PGEGYKTL--QAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERD 882
Query: 577 YYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPSAAS------ 630
+Y L +S+ QF Y +A T+ NY +I +L RLRQA HP LV ++S
Sbjct: 883 FYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHPLLVSSLSWSSSAEMVKK 942
Query: 631 ----KVGNLASNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLID 673
K+ L ++ CG+C+ A +D VV+ C H FC C+ +
Sbjct: 943 LPYEKLTFLLHRLEASL-AICGICNVAPKDAVVSLCGHVFCNQCICE 988
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 100/155 (64%), Gaps = 6/155 (3%)
Query: 749 KGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKA 808
K IVF+Q+T LDL+ L SG+ + +G MT+ ARDAA++ F PD + +MSLKA
Sbjct: 1116 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSLKA 1175
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
+ LN+ A HV ++D WWNP E QA DR HRIGQ +P+++VRF +++T+E+RIL LQ
Sbjct: 1176 ASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQ 1235
Query: 869 EKKELVFEGTVG----GSSEALGKLTEADLRFLFV 899
+KK + G GS E+ L+ DL +LF+
Sbjct: 1236 QKKRKMVASAFGEHENGSRES--HLSVEDLNYLFM 1268
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 228/501 (45%), Gaps = 113/501 (22%)
Query: 202 LTMPLLRYQREWLAWALKQESSA--TRGGILADEMGMGKTIQAIALVL------------ 247
LT+PLLR+QR L+W ++E+S GGILAD+ G+GKT+ IAL+L
Sbjct: 559 LTVPLLRHQRIALSWMAQKETSGFPCSGGILADDQGLGKTVSTIALILKERSKPAQACEE 618
Query: 248 -AKREFYPIG-----CEPDEPSA--------------------SPGSSRVLPLIKATLVI 281
K+E + + C P +PS S G P TLV+
Sbjct: 619 STKKEIFDLESETGECAPLKPSGRSKHFEHSQLLSNENKVGGDSVGKVTGRP-AAGTLVV 677
Query: 282 CPVVAVTQWVNEINR-FTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRKH 340
CP + QW +E+++ T + + VLVYHG+ R K +YD V+TT+SIV E K
Sbjct: 678 CPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEVPKQ 737
Query: 341 MMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLKEPRIT 400
+ + G H+ + T FC S + RK D+ K K+ ++
Sbjct: 738 PLVDDEDEEKDG---VHDGGT-AATGFC----------SNKKRKYPPDSKKKGSKKKKV- 782
Query: 401 NEDSDAVGQEKSFLHA----VKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTP 456
FL V W R++LDEA IK+ A+A L + RW LSGTP
Sbjct: 783 -----------EFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTP 831
Query: 457 LQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIA 516
+QN + +LYS RFL+ PYS Y+ C T+ N
Sbjct: 832 IQNSIDDLYSYFRFLKYDPYSSYVLF---CSTIK---------------------NPITR 867
Query: 517 TPIQSYGCGDSGKRAMILLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDSLDIK 573
P++ Y ILK+++LRRTK L ++LPP+ + LR+ ++
Sbjct: 868 NPVKGY-----------QKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFTVE 916
Query: 574 EQDYYESLYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLV--VYSPSAASK 631
E+D+Y L ES+ QF Y +A T+ NY +I +L RLRQA DHP LV YS + S
Sbjct: 917 ERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNGEYSFTWESS 976
Query: 632 VGNLASNGNGNVEQA-CGLCH 651
VG + A CG+C+
Sbjct: 977 VGLAKKQIQSDASLAICGICN 997
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 100/155 (64%), Gaps = 6/155 (3%)
Query: 749 KGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKA 808
K IVF+Q+T LDL+ L SG+ + +G MT+ ARDAA++ F PD + +MSLKA
Sbjct: 1073 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSLKA 1132
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
+ LN+ A HV ++D WWNP E QA DR HRIGQ +P+++VRF +++T+E+RIL LQ
Sbjct: 1133 ASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILALQ 1192
Query: 869 EKKELVFEGTVG----GSSEALGKLTEADLRFLFV 899
+KK + G GS E+ L+ DL +LF+
Sbjct: 1193 QKKRKMVASAFGEHENGSRES--HLSVEDLNYLFM 1225
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 131/273 (47%), Gaps = 49/273 (17%)
Query: 414 LHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQI 473
L V W R++LDEA IK+ + A L + RW LSGTP+QN + +LYS RFL+
Sbjct: 709 LAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKY 768
Query: 474 VPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGKRAMI 533
PYS Y + FC + I PI SY G+
Sbjct: 769 DPYSSY--------------------------QTFC---ETIKNPISSY----PGEGYKT 795
Query: 534 LLKNKILKSIVLRRTK---LGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQFN 590
L ILK ++LRRTK L ++LPP+ + LRR +E+D+Y L +S+ QF
Sbjct: 796 L--QAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFK 853
Query: 591 TYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPSAAS----------KVGNLASNGN 640
Y +A T+ NY +I +L RLRQA HP LV ++S K+ L
Sbjct: 854 EYAEAGTVKQNYVNILLMLLRLRQACGHPLLVSSLSWSSSAEMVKKLPYEKLTFLLHRLE 913
Query: 641 GNVEQACGLCHDAVEDPVVTSCEHTFCKGCLID 673
++ CG+C+ A +D VV+ C H FC C+ +
Sbjct: 914 ASL-AICGICNVAPKDAVVSLCGHVFCNQCICE 945
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 31/182 (17%)
Query: 184 DLDQHSELMNESAEAPSD--LTMPLLRYQREWLAWALKQESSATR--GGILADEMGMGKT 239
DL QHS S +P D L + LLR+QR L+W ++E+S GGILAD+ G+GKT
Sbjct: 523 DLSQHS-----SEASPPDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKT 577
Query: 240 IQAIALVLAKREFYPIGCEPDEPSASPGSSRVLPLI-------------------KATLV 280
+ IAL+L +R + CE D + S ++ TL+
Sbjct: 578 VSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLI 637
Query: 281 ICPVVAVTQWVNEI-NRFTLKGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRK 339
+CP + QW +E+ + TL+ VLVYHG R K +YD VITTYS+V RK
Sbjct: 638 VCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVITTYSLVSK--RK 695
Query: 340 HM 341
HM
Sbjct: 696 HM 697
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 199/511 (38%), Gaps = 103/511 (20%)
Query: 405 DAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGEL 464
D V ++ +L W+ ILDE H IK+ AV L++ +R LSGTP+QN + EL
Sbjct: 1595 DVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMEL 1654
Query: 465 YSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHF--CWWNKYIAT--PIQ 520
+SL FL +L + R F + +A P
Sbjct: 1655 WSLFDFL----MPGFLGTE----------------------RQFQASYGKPLLAARDPKC 1688
Query: 521 SYGCGDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYES 580
S ++G AM L +++ +LRRTK +D LP +I+ R L + YE
Sbjct: 1689 SAKDAEAGVLAMEALHKQVMP-FLLRRTKEEVLSD--LPEKIIQDRYCDLSPVQLKLYEQ 1745
Query: 581 LYNESQAQ-FNTYIQANTLMNN----------YAHIFDLLTRLRQAVDHPYLVVYSPSAA 629
S Q ++ I+ + ++ H+F L L + HP LV+
Sbjct: 1746 FSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTE 1805
Query: 630 SKVGNLASNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISCPSCSKL 689
+LA+ NG C D ++T L+ LE+ S +
Sbjct: 1806 PVASDLAAMING--------CSD-----IITELHKVQHSPKLVALQEILEECGIGSDAS- 1851
Query: 690 LTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIRFMVESDGSAK 749
S+ L V + + ++L+ I+ + FQ K
Sbjct: 1852 -----SSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMK------------------- 1887
Query: 750 GIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAG 809
V ++L+GS+ R +K F DP + L++ G
Sbjct: 1888 ---------------------SVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVG 1926
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ LNLT A + M+ WNP + QA DR HR+GQ + + + R ++ T+EE+++ LQ+
Sbjct: 1927 GLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQK 1986
Query: 870 KKELVFEGTVGGSSEALGKLTEADLRFLFVT 900
K V + + ++ + L LF +
Sbjct: 1987 FKVSVANTVINAENASMKTMNTDQLLDLFAS 2017
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 200 SDLTMPLLRYQREWLAWALKQESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGCEP 259
++L + L RYQ+E + W L GIL D+MG+GKT+QA A+V +
Sbjct: 1476 TELKVQLRRYQQEGINW-LGFLKRFKLHGILCDDMGLGKTLQASAIV---------ASDA 1525
Query: 260 DEPSASPGSSRVLPLIKATLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSG-- 317
E S V P ++++CP V W EI ++ VL Y G+ + +
Sbjct: 1526 AERRGSTDELDVFP----SIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLR 1581
Query: 318 EHFGEYDFVITTYSIVESE 336
E F ++ +IT+Y +V +
Sbjct: 1582 EQFNNHNVIITSYDVVRKD 1600
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 199/511 (38%), Gaps = 103/511 (20%)
Query: 405 DAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGEL 464
D V ++ +L W+ ILDE H IK+ AV L++ +R LSGTP+QN + EL
Sbjct: 1564 DVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMEL 1623
Query: 465 YSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHF--CWWNKYIAT--PIQ 520
+SL FL +L + R F + +A P
Sbjct: 1624 WSLFDFL----MPGFLGTE----------------------RQFQASYGKPLLAARDPKC 1657
Query: 521 SYGCGDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYES 580
S ++G AM L +++ +LRRTK +D LP +I+ R L + YE
Sbjct: 1658 SAKDAEAGVLAMEALHKQVMP-FLLRRTKEEVLSD--LPEKIIQDRYCDLSPVQLKLYEQ 1714
Query: 581 LYNESQAQ-FNTYIQANTLMNN----------YAHIFDLLTRLRQAVDHPYLVVYSPSAA 629
S Q ++ I+ + ++ H+F L L + HP LV+
Sbjct: 1715 FSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTE 1774
Query: 630 SKVGNLASNGNGNVEQACGLCHDAVEDPVVTSCEHTFCKGCLIDFSSSLEQISCPSCSKL 689
+LA+ NG C D ++T L+ LE+ S +
Sbjct: 1775 PVASDLAAMING--------CSD-----IITELHKVQHSPKLVALQEILEECGIGSDAS- 1820
Query: 690 LTVDLKSNKDLVVNTKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIRFMVESDGSAK 749
S+ L V + + ++L+ I+ + FQ K
Sbjct: 1821 -----SSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMK------------------- 1856
Query: 750 GIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAG 809
V ++L+GS+ R +K F DP + L++ G
Sbjct: 1857 ---------------------SVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVG 1895
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ LNLT A + M+ WNP + QA DR HR+GQ + + + R ++ T+EE+++ LQ+
Sbjct: 1896 GLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQK 1955
Query: 870 KKELVFEGTVGGSSEALGKLTEADLRFLFVT 900
K V + + ++ + L LF +
Sbjct: 1956 FKVSVANTVINAENASMKTMNTDQLLDLFAS 1986
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 200 SDLTMPLLRYQREWLAWALKQESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGCEP 259
++L + L RYQ+E + W L GIL D+MG+GKT+QA A+V +
Sbjct: 1445 TELKVQLRRYQQEGINW-LGFLKRFKLHGILCDDMGLGKTLQASAIV---------ASDA 1494
Query: 260 DEPSASPGSSRVLPLIKATLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSG-- 317
E S V P ++++CP V W EI ++ VL Y G+ + +
Sbjct: 1495 AERRGSTDELDVFP----SIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLR 1550
Query: 318 EHFGEYDFVITTYSIVESE 336
E F ++ +IT+Y +V +
Sbjct: 1551 EQFNNHNVIITSYDVVRKD 1569
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 749 KGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDD-PDCRIFLMSLK 807
K ++FSQ+T LD+++Y ++ G +++GS+ L R IK F+D+ C IFL+S +
Sbjct: 542 KVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTR 601
Query: 808 AGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILK 866
AGG+ +NLT A L D WNP ++ QA DR HRIGQ KP+ + R +IE R+LK
Sbjct: 602 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLK 660
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 157/420 (37%), Gaps = 121/420 (28%)
Query: 206 LLRYQREWLAWALKQESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGCEPDEPSAS 265
L YQ + + W + + GILAD+MG+GKTIQ I + + G D P
Sbjct: 202 LKSYQLKGVKWLISLWQNGL-NGILADQMGLGKTIQTIGFLSHLK-----GNGLDGP--- 252
Query: 266 PGSSRVLPLIKATLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSGEHFGEYDF 325
LVI P+ ++ W NEI RFT S ++YHG K +
Sbjct: 253 ------------YLVIAPLSTLSNWFNEIARFT--PSINAIIYHGDKNQRD--------- 289
Query: 326 VITTYSIVESEYRKHMMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKK 385
E R+ MP GP
Sbjct: 290 ----------ELRRKHMPKT----------------------VGP--------------- 302
Query: 386 ELDAFTKKLKEPRITNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALE 445
K P + A+ K L W +++DE H +K+ C + + L+
Sbjct: 303 ---------KFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLK 353
Query: 446 SSYRWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXV 505
+ L+GTPLQN + EL+SL+ F I+P + D D
Sbjct: 354 MDNKLLLTGTPLQNNLSELWSLLNF--ILP-DIFTSHDEFESWFD--------------- 395
Query: 506 RHFCWWNKYIATPIQSYGCGDSGKRAMILLK-NKILKSIVLRRTKLGRAADLALPPRIVS 564
F NK AT + + +RA ++ K + IL+ +LRR K +L+LP +
Sbjct: 396 --FSEKNKNEATKEE-----EEKRRAQVVSKLHGILRPFILRRMKCD--VELSLPRKKEI 446
Query: 565 LRRDSLDIKEQDYYESLYNESQAQFNTYIQANTLMNN--YAHIFDLLTRLRQAVDHPYLV 622
+ ++ ++ + E L N + ++ N + + +L+ +LR+ +HP L+
Sbjct: 447 IMYATMTDHQKKFQEHLVNNT---LEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLL 503
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 79/129 (61%)
Query: 746 GSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMS 805
G + ++F+Q T LD++ +N G ++L+GS R ++RF +P +F++S
Sbjct: 1090 GGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILS 1149
Query: 806 LKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERIL 865
++GG+ +NL A V D WNPA+++QAQDR HRIGQ + + I R + E+TIEE IL
Sbjct: 1150 TRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENIL 1209
Query: 866 KLQEKKELV 874
K +K ++
Sbjct: 1210 KKANQKRVL 1218
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 133/330 (40%), Gaps = 54/330 (16%)
Query: 407 VGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYS 466
V Q+ KW +ILDEAH IK+ + +L S R L+GTPLQN + EL+S
Sbjct: 646 VIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWS 705
Query: 467 LVRFLQIVPY---SYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYG 523
L+ FL +P+ S+ KD W+ IA ++ G
Sbjct: 706 LMHFL--MPHVFQSHQEFKD--------------------------WFCNPIAGMVE--G 735
Query: 524 CGDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYN 583
K + L N +L+ +LRR L R + LP + + L ++++ YE
Sbjct: 736 QEKINKEVIDRLHN-VLRPFLLRR--LKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIA 792
Query: 584 ESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPSAASKVGNLASNGNGNV 643
+T QA ++ + ++ +LR+ +HP L P +S +V
Sbjct: 793 ------STETQATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSS-----FDMAGIDV 841
Query: 644 EQACGLCHDAVEDPVV-TSCEHTFCKGCLIDFS------SSLEQISCPSCSKLLTVDLKS 696
+ + +C +E P E +DFS ++ IS PS V+LK
Sbjct: 842 QLSSTICSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKD 901
Query: 697 NKDLVVNTKTTIKGFRSSSILNRIQLENFQ 726
+ + + + K + ++I I+ F+
Sbjct: 902 DLEAIPLSPKNRKNLQGTNIFEEIRKAVFE 931
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 28/250 (11%)
Query: 644 EQACGLCHDAVED-PVVTSCEHTFCKGCLIDFSS------SLEQ-ISCPSCSKLLTVDLK 695
++AC +CH+ + + +V C H+ C C + +L++ + CP C + V
Sbjct: 1341 DEACPICHEILRNQKMVFQCGHSTCCNCFFAMTERKSVQETLQKWVMCPICRQHTDVRNI 1400
Query: 696 SNKDLVVNTKTTIKGFRSSSILNRIQLENFQTSTKIEALREEIRFMVESDGSAKGIVFSQ 755
+ D N+ ++ + + S +Q TKIEA+ I ++ SD K +VFS
Sbjct: 1401 AYADDRRNSSSSDQDHKDSEASLVVQ---GSYGTKIEAVTRRILWIKSSDPQTKVLVFSS 1457
Query: 756 FTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFT--------------DDPDCRI 801
+ LD++ ++ + + C+++ G AI +F ++ ++
Sbjct: 1458 WNDVLDVLEHAFAANSITCIRMKGGR---KSQTAISKFKGSEKETQKTNSHQKEEKSIQV 1514
Query: 802 FLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIE 861
L+ ++ G LNL A HV L++P NPA E QA R+HRIGQ KP + RF++ T+E
Sbjct: 1515 LLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVSGTVE 1574
Query: 862 ERILKLQEKK 871
E I KL K
Sbjct: 1575 ESIYKLNRNK 1584
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 136/375 (36%), Gaps = 122/375 (32%)
Query: 277 ATLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGKSGEH-------FGEYDFVITT 329
ATL++CP + QW +EI R T GS +Y G + E D V+TT
Sbjct: 501 ATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNADIVLTT 560
Query: 330 YSIVESEYRKHMMPPKKKCPYCGKLFYHNKLSFHQTYFCGPTAIKTEKQSKQSRKKELDA 389
Y +++ + H +C L F + Y PT
Sbjct: 561 YDVLKEDL-THDFDRHDGDRHC--------LRFQKRYPVIPTP----------------- 594
Query: 390 FTKKLKEPRITNEDSDAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYR 449
L + W RI LDEA ++S + L L + +R
Sbjct: 595 ------------------------LTRIFWWRICLDEAQMVESNAAAATEMALRLYTKHR 630
Query: 450 WALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFC 509
W ++GTP+Q ++ +L+ L++FL+ P+
Sbjct: 631 WCITGTPIQRKLDDLFGLLKFLKANPFDVSR----------------------------- 661
Query: 510 WWNKYIATPIQSYGCGDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPR-------- 561
WW + I P Y D+ +AM +K K ++ R +K+ A +L LPP+
Sbjct: 662 WWIEVIRDP---YERRDT--KAM-EFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLK 715
Query: 562 ---------------IVSLRRDSLDIKEQDYYESLYNESQAQFNTYIQANTLMNNYAHIF 606
VS R+ ++ ++D + + S T+ +A L+N+
Sbjct: 716 FSAIEEHFYSRQHDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNS----- 770
Query: 607 DLLTRLRQAVDHPYL 621
L +LRQA HP +
Sbjct: 771 --LLKLRQACCHPQV 783
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGG 810
++FSQ+TS LD++ ++L+ GV +L+GS + R + F +D L+S +AGG
Sbjct: 608 LIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGG 667
Query: 811 IALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEK 870
LNLT A V + D +NP ++RQA+DR HRIGQ KP+ I R V ++T++E I ++ K
Sbjct: 668 QGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIA-K 726
Query: 871 KELVFEGTV 879
++LV + V
Sbjct: 727 RKLVLDAAV 735
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
++FSQ T LD++ L G +++G+ RDA+I+ + + +FL+S +AG
Sbjct: 515 LIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAG 574
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQDR HRIGQ K +++ RF EN IE ++++
Sbjct: 575 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAY 634
Query: 870 KK 871
KK
Sbjct: 635 KK 636
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 409 QEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLV 468
+EK+ L W II+DEAH IK+ + +K + ++YR ++GTPLQN + EL++L+
Sbjct: 306 KEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 365
Query: 469 RFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSG 528
FL +P + T D W+ G++
Sbjct: 366 NFL--LPEVF-----SSAETFDE------------------WFQI----------SGEND 390
Query: 529 KRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQ 588
++ ++ +K+L+ +LRR K + LPP+ ++ + + ++ YY++L +
Sbjct: 391 QQEVVQQLHKVLRPFLLRRLK--SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEV 448
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
N + L+N + +LR+ +HPYL
Sbjct: 449 VNGGGERKRLLN-------IAMQLRKCCNHPYL 474
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
++FSQ T LD++ L G +++G+ RDA+I+ + + +FL+S +AG
Sbjct: 515 LIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAG 574
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQDR HRIGQ K +++ RF EN IE ++++
Sbjct: 575 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAY 634
Query: 870 KK 871
KK
Sbjct: 635 KK 636
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 409 QEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLV 468
+EK+ L W II+DEAH IK+ + +K + ++YR ++GTPLQN + EL++L+
Sbjct: 306 KEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 365
Query: 469 RFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSG 528
FL +P + T D W+ G++
Sbjct: 366 NFL--LPEVF-----SSAETFDE------------------WFQI----------SGEND 390
Query: 529 KRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQ 588
++ ++ +K+L+ +LRR K + LPP+ ++ + + ++ YY++L +
Sbjct: 391 QQEVVQQLHKVLRPFLLRRLK--SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEV 448
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
N + L+N + +LR+ +HPYL
Sbjct: 449 VNGGGERKRLLN-------IAMQLRKCCNHPYL 474
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Query: 746 GSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMS 805
G+ + ++F+Q T L+++ +N ++L+GS T+ R ++ F D +FL+S
Sbjct: 1254 GNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLS 1313
Query: 806 LKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERIL 865
+AGG+ +NLT A V + WNP ++ QA DR HR+GQ K + + R + + T+EE+IL
Sbjct: 1314 TRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKIL 1373
Query: 866 KLQEKKELVFEGTV-GGSSEALGKLTEADLRFLFV 899
+K V + + GG + L AD+ L +
Sbjct: 1374 HRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLM 1408
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 410 EKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVR 469
++ + VKW ++LDEA IKS K +L+ R L+GTP+QN + EL++L+
Sbjct: 738 DEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLH 797
Query: 470 FLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGK 529
F I+P L + D + W++K I + G + +
Sbjct: 798 F--IMP---MLFDNHD--------------------QFNEWFSKGIENHAEHGGTLNEHQ 832
Query: 530 RAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNE-SQAQ 588
+ + ILK +LRR K ++L + L ++Q +Y+++ N+ S A+
Sbjct: 833 LNRL---HAILKPFMLRRVKKDVVSELTTKTEVTV--HCKLSSRQQAFYQAIKNKISLAE 887
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
+ ++ +++ +LR+ +HP L
Sbjct: 888 LFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPEL 920
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Query: 746 GSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMS 805
G+ + ++F+Q T L+++ +N ++L+GS T+ R ++ F D +FL+S
Sbjct: 1221 GNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLS 1280
Query: 806 LKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERIL 865
+AGG+ +NLT A V + WNP ++ QA DR HR+GQ K + + R + + T+EE+IL
Sbjct: 1281 TRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKIL 1340
Query: 866 KLQEKKELVFEGTV-GGSSEALGKLTEADLRFLFV 899
+K V + + GG + L AD+ L +
Sbjct: 1341 HRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLM 1375
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 410 EKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVR 469
++ + VKW ++LDEA IKS K +L+ R L+GTP+QN + EL++L+
Sbjct: 705 DEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLH 764
Query: 470 FLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGK 529
F I+P L + D + W++K I + G + +
Sbjct: 765 F--IMP---MLFDNHD--------------------QFNEWFSKGIENHAEHGGTLNEHQ 799
Query: 530 RAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNE-SQAQ 588
+ + ILK +LRR K ++L + L ++Q +Y+++ N+ S A+
Sbjct: 800 LNRL---HAILKPFMLRRVKKDVVSELTTKTEVTV--HCKLSSRQQAFYQAIKNKISLAE 854
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
+ ++ +++ +LR+ +HP L
Sbjct: 855 LFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPEL 887
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Query: 751 IVFSQFTSFLDLINYSLN-KSGVNCVQ-LNGSMTLAARDAAIKRFTDDPDCRIFLMSLKA 808
++FSQ T LD++ LN + G + ++GS+ +A R AAI RF D + +FL+S +A
Sbjct: 1024 LIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLLSTRA 1083
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
G+ +NL A V + D +NP + QA +R HRIGQ K + + R V+ ++EERIL+L
Sbjct: 1084 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1143
Query: 869 EKK 871
+KK
Sbjct: 1144 KKK 1146
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 410 EKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVR 469
+ S L V W +++DE H +K+ + +R L+GTPLQN +GE+Y+L+
Sbjct: 814 DSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLN 873
Query: 470 FLQ 472
FLQ
Sbjct: 874 FLQ 876
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGG 810
++FSQ L+LI SL +G + ++++G+ R ++ F + IFL++ + GG
Sbjct: 752 LIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGG 811
Query: 811 IALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEK 870
+ L LT A V ++DP WNP+ + Q+ DR +RIGQ K + + R + T+EE+I + Q
Sbjct: 812 LGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVY 871
Query: 871 KELVFEGTVGGSSEALGKLTEADLRFLF 898
K +F+ T E + ++ DLR LF
Sbjct: 872 KGGLFK-TATEHKEQIRYFSQQDLRELF 898
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 418 KWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRF 470
KW +ILDE H IK+ + AK++L + SS+R +SGTP+QN + EL++L F
Sbjct: 508 KWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNF 560
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
++FSQ T LD++ L G +++G+ RDA+I+ + + +FL+S +AG
Sbjct: 510 LIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAG 569
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQDR HRIGQ K +++ RF E+ IEE++++
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 870 KK 871
KK
Sbjct: 630 KK 631
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 409 QEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLV 468
+EK+ L W II+DEAH IK+ + +K + ++YR ++GTPLQN + EL++L+
Sbjct: 301 KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 360
Query: 469 RFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSG 528
FL +P + T D W+ G++
Sbjct: 361 NFL--LPEIF-----SSAETFDE------------------WFQI----------SGEND 385
Query: 529 KRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQ 588
++ ++ +K+L+ +LRR K + LPP+ ++ + + ++ YY++L +
Sbjct: 386 QQEVVQQLHKVLRPFLLRRLK--SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEA 443
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
N + L+N + +LR+ +HPYL
Sbjct: 444 VNAGGERKRLLN-------IAMQLRKCCNHPYL 469
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
++FSQ T LD++ L G +++G+ RDA+I+ + + +FL+S +AG
Sbjct: 510 LIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAG 569
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQDR HRIGQ K +++ RF E+ IEE++++
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 870 KK 871
KK
Sbjct: 630 KK 631
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 409 QEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLV 468
+EK+ L W II+DEAH IK+ + +K + ++YR ++GTPLQN + EL++L+
Sbjct: 301 KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 360
Query: 469 RFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSG 528
FL +P + T D W+ G++
Sbjct: 361 NFL--LPEIF-----SSAETFDE------------------WFQI----------SGEND 385
Query: 529 KRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQ 588
++ ++ +K+L+ +LRR K + LPP+ ++ + + ++ YY++L +
Sbjct: 386 QQEVVQQLHKVLRPFLLRRLK--SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEA 443
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
N + L+N + +LR+ +HPYL
Sbjct: 444 VNAGGERKRLLN-------IAMQLRKCCNHPYL 469
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
++FSQ T LD++ L G +++G+ RDA+I+ + + +FL+S +AG
Sbjct: 510 LIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAG 569
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQDR HRIGQ K +++ RF E+ IEE++++
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 870 KK 871
KK
Sbjct: 630 KK 631
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 409 QEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLV 468
+EK+ L W II+DEAH IK+ + +K + ++YR ++GTPLQN + EL++L+
Sbjct: 301 KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 360
Query: 469 RFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSG 528
FL +P + T D W+ G++
Sbjct: 361 NFL--LPEIF-----SSAETFDE------------------WFQI----------SGEND 385
Query: 529 KRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQ 588
++ ++ +K+L+ +LRR K + LPP+ ++ + + ++ YY++L +
Sbjct: 386 QQEVVQQLHKVLRPFLLRRLK--SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEA 443
Query: 589 FNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
N + L+N + +LR+ +HPYL
Sbjct: 444 VNAGGERKRLLN-------IAMQLRKCCNHPYL 469
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 726 QTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAA 785
Q S K+ L + ++ + D + ++FSQ TS LD++ + + +L+GS+
Sbjct: 365 QASGKLLVLDQLLKRL--HDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEE 422
Query: 786 RDAAIKRFT-DDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIG 844
R AAIK F+ D + +F++S +AGG+ LNL A V + WNP V++QA R HRIG
Sbjct: 423 RFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 482
Query: 845 QYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSE 884
Q + + V E+++EE IL+ E+K + VG + E
Sbjct: 483 QISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNME 522
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 29/139 (20%)
Query: 202 LTMPLLRYQREWLAWALKQESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGCEPDE 261
+T L +Q E ++W +++ + D+MG+GKT+QAI+ L+ +F
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISF-LSYLKFR-------- 97
Query: 262 PSASPGSSRVLPLIKATLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKRGK------ 315
PG LV+CP+ WV+EINRFT + +VL Y G K +
Sbjct: 98 -QGLPG---------PFLVLCPLSVTDGWVSEINRFT--PNLEVLRYVGDKYCRLDMRKS 145
Query: 316 --SGEHFGEYDFVITTYSI 332
HF +D ++TTY I
Sbjct: 146 MYDHGHFLPFDVLLTTYDI 164
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR--IFLMSLKA 808
++FSQ T +DL+ L+ + ++L+GS R +K+F ++PD +FL+S +A
Sbjct: 715 LLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQF-NEPDSPYFMFLLSTRA 773
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
GG+ LNL A + + D WNP +++QA+DR HRIGQ K +R+ V +IEE IL+
Sbjct: 774 GGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERA 833
Query: 869 EKK 871
++K
Sbjct: 834 KQK 836
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 405 DAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAV-LALESSYRWALSGTPLQNRVGE 463
D + ++K+FL + W+ +I+DE H +K+ C AK + R L+GTP+QN + E
Sbjct: 493 DLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQE 552
Query: 464 LYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYG 523
L+SL+ FL +P+ + + +F W TP G
Sbjct: 553 LWSLLNFL--LPHIF------------------------NSIHNFEEW---FNTPFAECG 583
Query: 524 CGDSGKRAMILLKNK---ILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYES 580
+L+ N+ +++ +LRR K + LP + + + + ++ YY+
Sbjct: 584 SASLTDEEELLIINRLHHVIRPFLLRRKK--SEVEKFLPGKTQVILKCDMSAWQKLYYKQ 641
Query: 581 LYNESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVV 623
+ + + ++ + + N L +LR+ +HPYL V
Sbjct: 642 VTDVGRVGLHSGNGKSKSLQN------LTMQLRKCCNHPYLFV 678
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 13/170 (7%)
Query: 726 QTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAA 785
Q S K+ L + ++ + D + ++FSQ TS LD++ + + +L+GS+
Sbjct: 374 QASGKLLVLDQLLKRL--HDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEE 431
Query: 786 RDAAIKRFT-----------DDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVER 834
R AAIK F+ D + +F++S +AGG+ LNL A V + WNP V++
Sbjct: 432 RFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 491
Query: 835 QAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSE 884
QA R HRIGQ + + V E+++EE IL+ E+K + VG + E
Sbjct: 492 QALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNME 541
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 35/145 (24%)
Query: 202 LTMPLLRYQREWLAWALKQESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGCEPDE 261
+T L +Q E ++W +++ + D+MG+GKT+QAI+ L+ +F
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISF-LSYLKFR-------- 97
Query: 262 PSASPGSSRVLPLIKATLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAK--------- 312
PG LV+CP+ WV+EINRFT + +VL Y G K
Sbjct: 98 -QGLPG---------PFLVLCPLSVTDGWVSEINRFT--PNLEVLRYVGDKYCRLDMRKS 145
Query: 313 -----RGKSGEHFGEYDFVITTYSI 332
+ S HF +D ++TTY I
Sbjct: 146 MYDHVKKSSKGHFLPFDVLLTTYDI 170
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR--IFLMSLKA 808
++FSQ T +D++ L + ++L+G+ R +K+F ++PD +FL+S +A
Sbjct: 733 LLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQF-NEPDSPYFMFLLSTRA 791
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
GG+ LNL A V + D WNP +++QA+DR HRIGQ K +R+ V ++EE IL+
Sbjct: 792 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERA 851
Query: 869 EKK 871
++K
Sbjct: 852 KQK 854
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 35/220 (15%)
Query: 405 DAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVL-ALESSYRWALSGTPLQNRVGE 463
D + ++K+FL ++W +I+DE H +K+ AK +L R L+GTP+QN + E
Sbjct: 511 DLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQE 570
Query: 464 LYSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYG 523
L+SL+ FL +P+ + V++F W +
Sbjct: 571 LWSLLNFL--LPHIF------------------------NSVQNFEEWFNAPFADRGNVS 604
Query: 524 CGDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYN 583
D + +I + +++ +LRR K + LP + + + + ++ YY+ + +
Sbjct: 605 LTDEEELLIIHRLHHVIRPFILRRKK--DEVEKFLPGKTQVILKCDMSAWQKVYYKQVTD 662
Query: 584 ESQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYLVV 623
+ T + + N L +LR+ +HPYL V
Sbjct: 663 MGRVGLQTGSGKSKSLQN------LTMQLRKCCNHPYLFV 696
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
+ FS T LD++ L G ++L+G + R A I F IFL+S++AG
Sbjct: 1093 LFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1152
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQ R HRIGQ K + ++RF N++EE++ E
Sbjct: 1153 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAE 1212
Query: 870 KK 871
K
Sbjct: 1213 HK 1214
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 48/216 (22%)
Query: 414 LHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQI 473
L + W II+DE H IK+ C + SS+R L+GTPLQN + EL++L+ FL
Sbjct: 873 LSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFL-- 930
Query: 474 VPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGKRAMI 533
+P + +D W+NK P QS G + + +
Sbjct: 931 LPNIFNSSEDFS-----------------------QWFNK----PFQSNGESSAEEALLS 963
Query: 534 LLKN--------KILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNES 585
+N ++L+ VLRR L + LP +I L R + Y + L
Sbjct: 964 EEENLLIINRLHQVLRPFVLRR--LKHKVENELPEKIERLIR----CEASAYQKLLMKRV 1017
Query: 586 QAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
+ + A + + + + LR +HPYL
Sbjct: 1018 EDNLGSIGNAKSRA-----VHNSVMELRNICNHPYL 1048
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
+ FS T LD++ L G ++L+G + R A I F IFL+S++AG
Sbjct: 1093 LFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1152
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQ R HRIGQ K + ++RF N++EE++ E
Sbjct: 1153 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAE 1212
Query: 870 KK 871
K
Sbjct: 1213 HK 1214
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 50/217 (23%)
Query: 414 LHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQI 473
L + W II+DE H IK+ C + SS+R L+GTPLQN + EL++L+ FL
Sbjct: 873 LSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFL-- 930
Query: 474 VPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFC-WWNKYIATPIQSYGCGDSGKRAM 532
+P + +D F W+NK P QS G + + +
Sbjct: 931 LPNIFNSSED------------------------FSQWFNK----PFQSNGESSAEEALL 962
Query: 533 ILLKN--------KILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNE 584
+N ++L+ VLRR L + LP +I L R + Y + L
Sbjct: 963 SEEENLLIINRLHQVLRPFVLRR--LKHKVENELPEKIERLIR----CEASAYQKLLMKR 1016
Query: 585 SQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
+ + A + + + + LR +HPYL
Sbjct: 1017 VEDNLGSIGNAKSRA-----VHNSVMELRNICNHPYL 1048
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCR-IFLMSLKAG 809
+ FS T LD++ L G ++L+G + R A I F IFL+S++AG
Sbjct: 1093 LFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1152
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V L D WNP V+ QAQ R HRIGQ K + ++RF N++EE++ E
Sbjct: 1153 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAE 1212
Query: 870 KK 871
K
Sbjct: 1213 HK 1214
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 50/217 (23%)
Query: 414 LHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQI 473
L + W II+DE H IK+ C + SS+R L+GTPLQN + EL++L+ FL
Sbjct: 873 LSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFL-- 930
Query: 474 VPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFC-WWNKYIATPIQSYGCGDSGKRAM 532
+P + +D F W+NK P QS G + + +
Sbjct: 931 LPNIFNSSED------------------------FSQWFNK----PFQSNGESSAEEALL 962
Query: 533 ILLKN--------KILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNE 584
+N ++L+ VLRR L + LP +I L R + Y + L
Sbjct: 963 SEEENLLIINRLHQVLRPFVLRR--LKHKVENELPEKIERLIR----CEASAYQKLLMKR 1016
Query: 585 SQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
+ + A + + + + LR +HPYL
Sbjct: 1017 VEDNLGSIGNAKSRA-----VHNSVMELRNICNHPYL 1048
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFT---DDPDCRIFLMSLK 807
++FSQ LD++ L+ G +L+GS R A+ F D C FL+S +
Sbjct: 959 LIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFC--FLLSTR 1016
Query: 808 AGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKL 867
AGG+ +NL A V + D WNP + QA R HRIGQ + + I RFV ++EE IL+
Sbjct: 1017 AGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILE- 1075
Query: 868 QEKKELVFEGTVGGSSEALGKL 889
+ K+++V + V A G+L
Sbjct: 1076 RAKRKMVLDHLVIQKLNAEGRL 1097
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 405 DAVGQEKSFLHAVKWSRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGEL 464
+ V ++K+ L +KW +++DEAH +K+ A+L + + ++GTPLQN V EL
Sbjct: 740 EVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEEL 799
Query: 465 YSLVRFLQIVPYSYYLCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGC 524
++L+ FL + K+ D F +++Y
Sbjct: 800 WALLHFLDPGKF-----KNKD---------------------EF----------VENYKN 823
Query: 525 GDSGKRAMILLKNKILKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNE 584
S + + + L+ +LRR + + + +LPP+I + R + ++ YY+ +
Sbjct: 824 LSSFNESELANLHLELRPHILRR--VIKDVEKSLPPKIERILRVEMSPLQKQYYKWILER 881
Query: 585 SQAQFNTYIQANTLMNNYAHIFDLLTRLRQAVDHPYL 621
+ N ++ N + + +++ L++ +HP+L
Sbjct: 882 NFHDLNKGVRGNQV-----SLLNIVVELKKCCNHPFL 913
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%)
Query: 749 KGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKA 808
K ++FS LD++ L + G + +L+GS R + + F P ++FL+S KA
Sbjct: 546 KILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQVFLISTKA 605
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
GG+ LNL A+ V + DP WNP+ + QAQDR R GQ + + + R + ++EE + Q
Sbjct: 606 GGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQ 665
Query: 869 EKKELVFEGTVGGSSEA 885
K+ + V G E
Sbjct: 666 VYKQQLSNIAVAGKMET 682
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 198 APSDLTMPLLRYQREWLAWALKQESSATRGGILADEMGMGKTIQAIALVLAKREFYPIGC 257
P+ + LL +QRE + + + GGIL D+MG+GKTIQ IA + A G
Sbjct: 131 VPASINCRLLEHQREGVKFMYNLYKN-NHGGILGDDMGLGKTIQTIAFLAA-----VYGK 184
Query: 258 EPDEPSASPGSSRVLPLIKA-TLVICPVVAVTQWVNEINRFTLKGSTKVLVYHGAKR 313
+ D G S +L K L+ICP + W +E +R+ KV VYHG+ R
Sbjct: 185 DGD-----AGESCLLESDKGPVLIICPSSIIHNWESEFSRWA--SFFKVSVYHGSNR 234
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTD-DPDCRIFLMSLKAG 809
++ S +T LDL + ++L+GS T++ R + R D D FL+S KAG
Sbjct: 555 VLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAG 614
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G LNL A+ + L DP WNPA ++QA R+ R GQ K + + RF+ TIEE++ + Q
Sbjct: 615 GCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQM 674
Query: 870 KKE----LVFEGTVGGSSEALGKLTEADLRFLF 898
KE ++ S+ L+ DLR LF
Sbjct: 675 SKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLF 707
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDP-DCRIFLMSLKAG 809
++ S +T LDL + ++L+GS T++ R + R D D FL+S KAG
Sbjct: 553 VLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAG 612
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G LNL A+ + L DP WNPA ++QA R+ R GQ K + + RF+ TIEE++ + Q
Sbjct: 613 GCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQM 672
Query: 870 KKE----LVFEGTVGGSSEALGKLTEADLRFLF 898
KE ++ S+ L+ DLR LF
Sbjct: 673 SKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLF 705
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 749 KGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKA 808
K ++FSQF + +I L +G+ ++ M + A+ F +D DC LM +
Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMD-GS 1253
Query: 809 GGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
G + L+L+ +HVFLM+P W+ ++E Q R HR+G +PI + + TIEE++++
Sbjct: 1254 GALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFL 1313
Query: 869 EKKE 872
E E
Sbjct: 1314 EDAE 1317
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRI-FLMSLKAG 809
++++QF L L+ N +++G ++ R I RF + R FL+S +AG
Sbjct: 544 LIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAG 603
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
GI +NL A V + D WNP + QA R+HR+GQ + I R + + T+EER++++ +
Sbjct: 604 GIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK 663
Query: 870 KKELVFEGTVG 880
K L+ VG
Sbjct: 664 NKMLLEHLVVG 674
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGG 810
++FSQ LD++ L + + +++G + R A I F + D +F+++ K GG
Sbjct: 747 LLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGG 806
Query: 811 IALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQ 868
+ NLT A+ V + DP WNP+ + QA++R RIGQ K + + R + TIEE++ Q
Sbjct: 807 LGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQ 864
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRI-FLMSLKAG 809
++++QF L L+ N +++G ++ R I RF + R FL+S +AG
Sbjct: 503 LIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAG 562
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
GI +NL A V + D WNP + QA R+HR+GQ + I R + + T+EER++++ +
Sbjct: 563 GIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK 622
Query: 870 KKELVFEGTVG 880
K L+ VG
Sbjct: 623 NKMLLEHLVVG 633
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDCRI-FLMSLKAG 809
++++QF LDL+ +++G + A R I RF + FL+S +AG
Sbjct: 615 LIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAG 674
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G+ +NL A V + D WNP + QA R HR+GQ + I R + TIEER+++L
Sbjct: 675 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLT- 733
Query: 870 KKELVFEGTVGG 881
KK++V E V G
Sbjct: 734 KKKMVLEHLVVG 745
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 168/443 (37%), Gaps = 116/443 (26%)
Query: 180 SEDVDLDQHSELMNESAEAPSDLTMPLLRYQREWLAWALKQESSATRGGILADEMGMGKT 239
S+DVD ++ + P L L YQ E L + L+ S ILADEMG+GKT
Sbjct: 247 SKDVDHKRNPRDFQQFDHTPEFLKGLLHPYQLEGLNF-LRFSWSKQTHVILADEMGLGKT 305
Query: 240 IQAIALVLAKREFYPIGCEPDEPSASPGSSRVLPLIKATLVICPVVAVTQWVNEINRFTL 299
IQ+IAL+ AS ++P LVI P+ + W E T
Sbjct: 306 IQSIALL-----------------ASLFEENLIP----HLVIAPLSTLRNWEREFA--TW 342
Query: 300 KGSTKVLVYHGAKRGKSGEHFGEYDFVITTYSIVESEYRKHMMPPKKKCPYCGKLFYHNK 359
V++Y G + ++ VI R+H FY
Sbjct: 343 APQMNVVMYFGTAQARA---------VI----------REHE-------------FY--- 367
Query: 360 LSFHQTYFCGPTAIKTEKQSKQSRKKELDAFTKKLKEPRITNEDSDAVGQEKSFLHAVKW 419
LS Q + + +SKQ R K F L + N DS + L +KW
Sbjct: 368 LSKDQKKIKKKKSGQISSESKQKRIK----FDVLLTSYEMINLDS-------AVLKPIKW 416
Query: 420 SRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQIVPYSYY 479
+I+DE H +K++ ++ S++R L+GTPLQN + EL+ L+ FL +
Sbjct: 417 ECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFG-- 474
Query: 480 LCKDCDCRTLDXXXXXXXXXXXXXXVRHFCWWNKYIATPIQSYGCGDSGKRAMILLKNKI 539
+ F K D + I +K+
Sbjct: 475 ------------------------SLEEFQEEFK------------DINQEEQISRLHKM 498
Query: 540 LKSIVLRRTKLGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQFNTYIQANTLM 599
L +LRR K D +PP+ + R L +++YY++++ + A +
Sbjct: 499 LAPHLLRRVKKDVMKD--MPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISL 556
Query: 600 NNYAHIFDLLTRLRQAVDHPYLV 622
NN ++ LR+ HPY++
Sbjct: 557 NN------IMMELRKVCCHPYML 573
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTD-DPDCRIFLMSLKAG 809
++FS T LD++ L + +++G+ +L R++AI F D D DC IFL+S++A
Sbjct: 1327 LLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAA 1386
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G LNL A V + DP NP E QA R HRIGQ + ++++ + E++ Q+
Sbjct: 1387 GRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYM---EAVVEKLSSHQK 1443
Query: 870 KKELVFEGTVGGSSEALGK 888
+ EL G+V + GK
Sbjct: 1444 EDELRSGGSVDLEDDMAGK 1462
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 751 IVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTD-DPDCRIFLMSLKAG 809
++FS T LD++ L + +++G+ +L R++AI F D D DC IFL+S++A
Sbjct: 1328 LLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAA 1387
Query: 810 GIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQE 869
G LNL A V + DP NP E QA R HRIGQ + ++++ + E++ Q+
Sbjct: 1388 GRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYM---EAVVEKLSSHQK 1444
Query: 870 KKELVFEGTVGGSSEALGK 888
+ EL G+V + GK
Sbjct: 1445 EDELRSGGSVDLEDDMAGK 1463
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 711 FRSSSILNRIQLENFQTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLINYSLNKS 770
F +++N+I ++ KI A+ + + ++E+ K +VF+ S L+ ++ L K
Sbjct: 452 FIEKNLINKIYTDS--AVAKIPAVLDYLENVIEA--GCKFLVFAHHQSMLEELHQFLKKK 507
Query: 771 GVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNP 830
V C++++GS ++R A + F D + + ++S++A G+ + LT AS V + W P
Sbjct: 508 KVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTP 567
Query: 831 AVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEAL 886
QA+DR HRIGQ + I + +T+++ I + + K + G AL
Sbjct: 568 GDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDGQENAL 623
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 744 SDGSAKGIVFSQFTSFLDLINYSLN------------KSGVNCVQLNGSMTLAARDAAIK 791
+D K +VFSQ LDLI L+ K G + +++G + R +
Sbjct: 1107 ADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVD 1166
Query: 792 RFTDDPDCRI--FLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPI 849
RF + + R+ L+S +AG + +NL A+ V ++D WNP + QA R R GQ KP+
Sbjct: 1167 RFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPV 1226
Query: 850 RIVRFVIENTIEERILKLQEKKE 872
R + TIEE+I K Q KE
Sbjct: 1227 FAYRLMARGTIEEKIYKRQVTKE 1249
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 744 SDGSAKGIVFSQFTSFLDLINYSLN------------KSGVNCVQLNGSMTLAARDAAIK 791
+D K +VFSQ LDLI L+ K G + +++G + R +
Sbjct: 1128 ADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVD 1187
Query: 792 RFTDDPDCRI--FLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPI 849
RF + + R+ L+S +AG + +NL A+ V ++D WNP + QA R R GQ KP+
Sbjct: 1188 RFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPV 1247
Query: 850 RIVRFVIENTIEERILKLQEKKE 872
R + TIEE+I K Q KE
Sbjct: 1248 FAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 744 SDGSAKGIVFSQFTSFLDLINYSLN------------KSGVNCVQLNGSMTLAARDAAIK 791
+D K +VFSQ LDLI L+ K G + +++G + R +
Sbjct: 1128 ADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVD 1187
Query: 792 RFTDDPDCRI--FLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPI 849
RF + + R+ L+S +AG + +NL A+ V ++D WNP + QA R R GQ KP+
Sbjct: 1188 RFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPV 1247
Query: 850 RIVRFVIENTIEERILKLQEKKE 872
R + TIEE+I K Q KE
Sbjct: 1248 FAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 744 SDGSAKGIVFSQFTSFLDLINYSLN------------KSGVNCVQLNGSMTLAARDAAIK 791
+D K +VFSQ LDLI L+ K G + +++G + R +
Sbjct: 1128 ADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVD 1187
Query: 792 RFTDDPDCRI--FLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPI 849
RF + + R+ L+S +AG + +NL A+ V ++D WNP + QA R R GQ KP+
Sbjct: 1188 RFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPV 1247
Query: 850 RIVRFVIENTIEERILKLQEKKE 872
R + TIEE+I K Q KE
Sbjct: 1248 FAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 749 KGIVFSQFTSFLDLINYSLN-----KSGVNCVQLNGSMTLAARDAAIKRFTD-DPDCRIF 802
K +VFSQ+ L LI L G + ++G + R I F D ++F
Sbjct: 1217 KVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVF 1276
Query: 803 LMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIE 861
L S KA ++L AS V L+D WNPAVERQA R +RIGQ + + V + T E
Sbjct: 1277 LASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPE 1335
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 743 ESDG---SAKGIVFSQFTSFLDLINYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDPDC 799
E DG S K +VF+ LD I + G+ V+++G+ R A++ F +
Sbjct: 547 EIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEV 606
Query: 800 RIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENT 859
+I ++ ++AGG+ L+ + A +V ++ P++ QA+DR HR GQ + + F ++T
Sbjct: 607 KIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDT 666
Query: 860 IEE 862
++E
Sbjct: 667 MDE 669
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 741 MVESDGSAKGIVFSQFTSFLDLINYSLN-----KSGVNCVQLNGSMTLAARDAAIKRFTD 795
+ ES G K +VFSQ+ + + ++ + G + G + R+ +++RF +
Sbjct: 631 LCESTGE-KLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNN 689
Query: 796 DPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFV 855
+ ++F S+KA G ++L AS V ++D NP+V +QA R +R GQ + + + V
Sbjct: 690 SLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLV 749
Query: 856 IENTIEERILKLQEKKELV----FEGTVGGSSEALG 887
++ EE + +KE++ FE VG E G
Sbjct: 750 AADSPEEENYETCTRKEMMSKMWFEWNVGSGREDFG 785
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 749 KGIVFSQFTSFLDLIN--YSLNKS---GVNCVQLNGSMTLAARDAAIKRFTDDPDCRIFL 803
K +VFSQ+ L + +L K G L G+ + R+ +++ F PD +IF
Sbjct: 712 KLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKIFF 771
Query: 804 MSLKAGGIALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEER 863
S+KA G ++L AS + ++D NP+V RQA R R GQ K + R + ++ EE
Sbjct: 772 GSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEE 831
Query: 864 ILKLQEKKELV 874
KKE++
Sbjct: 832 DHNTCFKKEVI 842
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 717 LNRIQLENFQTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLINYSLN-----KSG 771
L R++L+ ++ K + L + IR + K +V+SQ+ L LI L G
Sbjct: 916 LKRLRLK-YEEGVKTKFLIDFIR--ISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEG 972
Query: 772 VNCVQLNGSMTLAARDAAIKRFTD-DPDCRIFLMSLKAGGIALNLTVASHVFLMDPWWNP 830
+ ++G + R I F D ++ L S KA ++L AS V ++D WNP
Sbjct: 973 EQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNP 1032
Query: 831 AVERQAQDRIHRIGQYKPIRIVRFVIENTIE-ERILKLQEK---KELVFEGT 878
+VE QA R RIGQ + + I ++++T E + K EK ELVF T
Sbjct: 1033 SVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSST 1084
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 759 FLDLI-NYSLNKSGVNCVQLNGSMTLAARDAAIKRFTDDP--DCRIFLMSLKAGGIALNL 815
FL+L N K G + L G + L R I +F ++P R+ L S+ A ++L
Sbjct: 1088 FLELFENVFRWKRGRELLTLTGDLELFERGRVIDKF-EEPGGQSRVLLASITACAEGISL 1146
Query: 816 TVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELV 874
T AS V ++D WNP+ +QA R R GQ K + + + + T+EE + KE V
Sbjct: 1147 TAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWV 1205
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 771 GVNCVQLNGSMTLAARDAAIKRFTDDPD-CRIFLMSLKAGGIALNLTVASHVFLMDPWWN 829
G + L G + L R I +F + + R+ L S+ A ++LT AS V ++D WN
Sbjct: 1107 GREILTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWN 1166
Query: 830 PAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELV 874
P+ +QA R R GQ K + + + + T+EE + KE V
Sbjct: 1167 PSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWV 1211