Miyakogusa Predicted Gene
- Lj3g3v2903000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2903000.1 tr|G7JDG8|G7JDG8_MEDTR Septum-promoting
GTP-binding protein OS=Medicago truncatula GN=MTR_4g047870
P,79.43,0,Rab subfamily of small GTPases,Small GTPase superfamily, Rab
type; P-loop containing nucleoside trip,CUFF.44925.1
(281 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21700.3 | Symbols: SGP2 | Ras-related small GTP-binding fami... 317 6e-87
AT3G21700.1 | Symbols: ATSGP2, SGP2 | Ras-related small GTP-bind... 312 1e-85
AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-bind... 277 6e-75
AT3G21700.2 | Symbols: SGP2 | Ras-related small GTP-binding fami... 204 5e-53
AT5G54840.2 | Symbols: SGP1 | Ras-related small GTP-binding fami... 143 2e-34
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 69 3e-12
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 68 6e-12
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 67 1e-11
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 64 1e-10
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 63 2e-10
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 62 4e-10
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 62 6e-10
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 60 2e-09
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 59 3e-09
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 59 3e-09
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 59 3e-09
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 59 3e-09
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 59 4e-09
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 58 6e-09
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 58 7e-09
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 55 4e-08
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 55 5e-08
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 55 6e-08
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 53 2e-07
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 53 2e-07
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 53 2e-07
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 53 3e-07
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 52 3e-07
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 52 3e-07
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 52 3e-07
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 52 5e-07
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 52 5e-07
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 52 5e-07
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 51 7e-07
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 51 8e-07
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 51 8e-07
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 51 8e-07
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 51 9e-07
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 51 1e-06
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 51 1e-06
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 50 1e-06
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 50 1e-06
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 50 1e-06
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 50 1e-06
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 50 1e-06
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 50 2e-06
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 50 2e-06
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 50 2e-06
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 50 2e-06
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 50 2e-06
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 50 2e-06
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 50 2e-06
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 50 3e-06
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 49 3e-06
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 49 5e-06
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 48 6e-06
>AT3G21700.3 | Symbols: SGP2 | Ras-related small GTP-binding family
protein | chr3:7644581-7646190 FORWARD LENGTH=292
Length = 292
Score = 317 bits (812), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/193 (79%), Positives = 175/193 (90%), Gaps = 3/193 (1%)
Query: 91 ESDLVSLKISLLGDCQIGKTSFLVKYVGDEKE--QGELQRKGLNQMDKTLVVEGARISYC 148
+SDLVSLKISLLGD +IGKTSFL KYVG+EKE EL+ KG+N DKTL + GARISY
Sbjct: 101 DSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELE-KGINCTDKTLYMGGARISYS 159
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGT 208
IWE++G ++ DQ+P+ACKDSVAIL MFDLTSRCTLNSV+ WY++ARK NQTAIPV++GT
Sbjct: 160 IWELEGAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPVMVGT 219
Query: 209 KFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTV 268
KFD+FIQLPIDLQWTIAS+ARTYAKALNATLFFSSA+YNINVNKIFKF+TAKLFDLPWTV
Sbjct: 220 KFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNINVNKIFKFVTAKLFDLPWTV 279
Query: 269 ERNLTVGEPIIDF 281
ERNLT+GEPIIDF
Sbjct: 280 ERNLTIGEPIIDF 292
>AT3G21700.1 | Symbols: ATSGP2, SGP2 | Ras-related small GTP-binding
family protein | chr3:7644581-7646190 FORWARD LENGTH=291
Length = 291
Score = 312 bits (800), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/193 (78%), Positives = 175/193 (90%), Gaps = 4/193 (2%)
Query: 91 ESDLVSLKISLLGDCQIGKTSFLVKYVGDEKE--QGELQRKGLNQMDKTLVVEGARISYC 148
+SDLVSLKISLLGD +IGKTSFL KYVG+EKE EL+ KG+N DKTL + GARISY
Sbjct: 101 DSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELE-KGINCTDKTLYMGGARISYS 159
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGT 208
IWE++ + ++ DQ+P+ACKDSVAIL MFDLTSRCTLNSV+ WY++ARK NQTAIPV++GT
Sbjct: 160 IWELEAE-RSRDQIPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPVMVGT 218
Query: 209 KFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTV 268
KFD+FIQLPIDLQWTIAS+ARTYAKALNATLFFSSA+YNINVNKIFKF+TAKLFDLPWTV
Sbjct: 219 KFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNINVNKIFKFVTAKLFDLPWTV 278
Query: 269 ERNLTVGEPIIDF 281
ERNLT+GEPIIDF
Sbjct: 279 ERNLTIGEPIIDF 291
>AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-binding
family protein | chr5:22276611-22278328 REVERSE
LENGTH=288
Length = 288
Score = 277 bits (709), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 131/185 (70%), Positives = 157/185 (84%), Gaps = 2/185 (1%)
Query: 98 KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGK 157
KISLLGDCQ GKT+F+VKYVGDE Q L+ GLN MDKT V+G IS+ IW+V GD K
Sbjct: 103 KISLLGDCQTGKTTFVVKYVGDE-NQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEK 161
Query: 158 -TDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQL 216
+ D +PIACKD+VAIL MFDLTSR TLNSV GWY +ARKWN+TAIP+LIGTKFDDF++L
Sbjct: 162 RSKDHIPIACKDAVAILFMFDLTSRSTLNSVFGWYSQARKWNKTAIPILIGTKFDDFVRL 221
Query: 217 PIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGE 276
P +LQWTI ++AR YAK +NA+LFFSSAT+NINVNKIFKFI A+LF+LPW ++RNLT+GE
Sbjct: 222 PPNLQWTIVTQARAYAKVMNASLFFSSATHNINVNKIFKFILARLFNLPWKIDRNLTLGE 281
Query: 277 PIIDF 281
PIID+
Sbjct: 282 PIIDY 286
>AT3G21700.2 | Symbols: SGP2 | Ras-related small GTP-binding family
protein | chr3:7644581-7645954 FORWARD LENGTH=248
Length = 248
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 121/139 (87%), Gaps = 4/139 (2%)
Query: 91 ESDLVSLKISLLGDCQIGKTSFLVKYVGDEKE--QGELQRKGLNQMDKTLVVEGARISYC 148
+SDLVSLKISLLGD +IGKTSFL KYVG+EKE EL+ KG+N DKTL + GARISY
Sbjct: 101 DSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELE-KGINCTDKTLYMGGARISYS 159
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGT 208
IWE++ + ++ DQ+P+ACKDSVAIL MFDLTSRCTLNSV+ WY++ARK NQTAIPV++GT
Sbjct: 160 IWELEAE-RSRDQIPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPVMVGT 218
Query: 209 KFDDFIQLPIDLQWTIASE 227
KFD+FIQLPIDLQWTIAS+
Sbjct: 219 KFDEFIQLPIDLQWTIASQ 237
>AT5G54840.2 | Symbols: SGP1 | Ras-related small GTP-binding family
protein | chr5:22277361-22278328 REVERSE LENGTH=215
Length = 215
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
Query: 98 KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGK 157
KISLLGDCQ GKT+F+VKYVGDE Q L+ GLN MDKT V+G IS+ IW+V GD K
Sbjct: 103 KISLLGDCQTGKTTFVVKYVGDE-NQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEK 161
Query: 158 -TDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQ 199
+ D +PIACKD+VAIL MFDLTSR TLNSV GWY +ARKWN+
Sbjct: 162 RSKDHIPIACKDAVAILFMFDLTSRSTLNSVFGWYSQARKWNK 204
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKF 210
G + +P +DS +I++D+ SR + + W E R + I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKT 124
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D +D + EA A+ LN +SA N+ +F+ I A L
Sbjct: 125 D-----LVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
++ K+ LLGD GK+S ++++V D+ + + G +TL V A + + IW+ G
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKFDDF 213
+ P+ + + A +I+FD+T++ + W +E + + N + L G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD-- 126
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKL 261
+D + A +A+TYA+ LFF +SA NV +IF I +L
Sbjct: 127 ---LLDARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
++ K+ LLGD GK+S ++++V D+ + + G +TL V A + + IW+ G
Sbjct: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKFDDF 213
+ P+ + + A +I+FD+T++ + W +E + + N + L G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD-- 126
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKL 261
+D + A EA YA+ +LFF +SA NV IF I +L
Sbjct: 127 ---LLDARKVSAEEAEIYAQ--ENSLFFMETSAKTATNVKDIFYEIAKRL 171
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 88 HDFESDLVSL-KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARIS 146
H E D L KI L+GD +GKT+ L ++ +E G+ +TL VEG +
Sbjct: 3 HRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 147 YCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLI 206
IW+ G + + +V L+++D+T R T ++VL W +E R + I +++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 207 GTKFDDFIQLPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
D L ++A E +T A+ + +SA NV K F+ + A+++ +
Sbjct: 123 AGNKADLNHLR-----SVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHI 176
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRK-GLNQMDKTLVVEGARISYCIWEVQ 153
+S KI L+GD +GK+S LV ++ E +L G++ K L V G R+ IW+
Sbjct: 12 LSFKILLIGDSGVGKSSLLVSFISSSVE--DLAPTIGVDFKIKQLTVGGKRLKLTIWDTA 69
Query: 154 GDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKF 210
G + + + I++++D+T R T +++ W KE + NQ + +L+G K
Sbjct: 70 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKV 129
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVE 269
D + + + IA AK LN SA NV + F+ + K+ ++P +E
Sbjct: 130 DRESERGVSREEGIA-----LAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEA-RKWNQT-AIPVLIGTK 209
G + +P +DS ++++D+++R T + W ++ R+ Q+ I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNK 124
Query: 210 FDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D ++ + SE K +SA N N+ +F+ I A L
Sbjct: 125 TD-----LVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Query: 89 DFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYC 148
D E D + KI L+GD +GK++ L ++ +E G+ +TL VEG +
Sbjct: 6 DHEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGT 208
IW+ G + + +V L+++D+T R T +VL W +E R + I +++
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAG 124
Query: 209 KFDDFIQLPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
D L ++A E R+ A+ + +SA N+ K F+ I ++++ +
Sbjct: 125 NKSDLNHLR-----SVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHI 176
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 86 HTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARI 145
H D E D + KI L+GD +GK++ L ++ +E G+ +T VEG I
Sbjct: 3 HRVDQEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTI 61
Query: 146 SYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVL 205
IW+ G + + +V L+++D+T R T ++VL W +E R + I ++
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIM 121
Query: 206 IGTKFDDFIQLPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
+ D L ++A E ++ A+ + +SA NV K F+ I +++ +
Sbjct: 122 MAGNKSDLNHLR-----SVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHI 176
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 79 VAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTL 138
VAP +D+ +K+ L+GD +GK+ L+++ D + G++ +T+
Sbjct: 3 VAPARARSDYDY-----LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTV 57
Query: 139 VVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWN 198
++G RI IW+ G + + ++ IL+++D+T + N++ W K +
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHA 117
Query: 199 QTAI-PVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFI 257
++ +L+G K D + + S+ + A F +SA N NV ++F I
Sbjct: 118 SDSVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSI 173
Query: 258 TAKLFDLPWTVERNLTVGEP 277
D+ + + T EP
Sbjct: 174 AK---DIKQRLTESDTKAEP 190
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L +Y DE G+ +TLV++ + IW+ G
Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQE 77
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARK-WNQTAIPVLIGTKFDDFIQ 215
+ + +V ++++D+T R T + + W +E R ++ + +LIG K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSD---- 133
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
+D + +A+ +A+ +SA NV F + ++F++
Sbjct: 134 -LVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNI 181
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTA---IPVLIGT 208
G + +P +DS ++++D+ +R + + W +E R N+ A I VL+G
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVR--NERAGDVIIVLVGN 122
Query: 209 KFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTV 268
K D + + ++ E + + +SA N+ +F+ I A LP
Sbjct: 123 KTDLVEKRQVSIE-----EGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAA---LPGME 174
Query: 269 ERNLTVGEPIID 280
+ T E ++D
Sbjct: 175 SYSNTKNEDMVD 186
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 84 VFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGA 143
F++ D +S+ KI L+GD +GK++ L ++ DE G+ + + + G
Sbjct: 2 AFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
Query: 144 RISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAI 202
I IW+ G + + +V L+++D++ R T +S+ W E + +
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVV 121
Query: 203 PVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
+L+G K D DL+ +E + A+A +SA + NV F+ + +++
Sbjct: 122 TILVGNKSD-----LKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIY 176
Query: 263 DL 264
++
Sbjct: 177 NI 178
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKF 210
G + +P +DS +I++D+ +R + + W ++ R + I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKT 124
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D +D + E A+ +SA N+ +F+ I A L
Sbjct: 125 D-----LVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAAL 170
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 79 VAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTL 138
VAP +D+ +K+ L+GD +GK+ L+++ D + G++ +T+
Sbjct: 3 VAPARARSDYDY-----LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTV 57
Query: 139 VVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWN 198
++G RI IW+ G + + ++ IL+++D+T + N++ W K +
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHA 117
Query: 199 QTAI-PVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFI 257
+ +L+G K D + + ++ + A F +SA N+NV +F I
Sbjct: 118 SDNVNKILVGNKAD----MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSI 173
Query: 258 TAKLFDLPWTVERNLTVGEP 277
D+ + T EP
Sbjct: 174 AK---DIKQRLTETDTKAEP 190
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 89 DFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYC 148
D E D + K+ L+GD +GK++ L ++ +E G+ +TL VEG +
Sbjct: 6 DEEYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIG 207
IW+ G + + ++ L+++D+T T +V W KE R + I + LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 208 TKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
K D L+ +A++YA+ + +SA +NV K F+ I ++++
Sbjct: 125 NKTD-----LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVY 174
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +TL V+G + IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFD--DF 213
+ + +V L+++D+T R T +V W KE + I V L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHL 133
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLT 273
+ +P + + ++YA+ + +SA NV F + +++ + T ++ +
Sbjct: 134 LAVPTE-------DGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI--TSKKQVE 184
Query: 274 VGE 276
GE
Sbjct: 185 AGE 187
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L ++ DE G+ +TL +E I IW+ G
Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQE 77
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARK-WNQTAIPVLIGTKFDDFIQ 215
+ + +V ++++D+T R T + W +E R ++ + +LIG K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSD---- 133
Query: 216 LPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKLFD 263
++ Q + +E A+ +A+ +SA NV F + ++++
Sbjct: 134 --LEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYN 180
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
KI L+GD +GK++ L ++ DE + G+ + + +EG + IW+ G
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQE 72
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIP-VLIGTKFDDFIQ 215
+ + + LI++D+T T SV W +E TA+ +L+G K D
Sbjct: 73 RFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCD---- 128
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFD 263
D++ E + A+ +SA NV+K F+ + ++F+
Sbjct: 129 -LEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFN 175
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
KI ++GD +GK++ L +Y +E G+ +++ +EG + IW+ G
Sbjct: 56 FKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQE 115
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIP-VLIGTKFD--DF 213
+ + +V L+++D+T R T SV W E + + T + +L+G K D +
Sbjct: 116 RFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENI 175
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKLFD 263
+ ++ +A E LFF +SA + NV F+ + +++
Sbjct: 176 RAVSVEEGKALAEE---------EGLFFVETSALDSTNVKTAFEMVILDIYN 218
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
DL + K+ ++GD GKT+FL +++ E E G++ +I + W+
Sbjct: 10 DLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAI-----LIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIG 207
G K KD+ I +IMFD+T+R T ++ WY++ R+ + VL G
Sbjct: 70 AGQEKYS-----GLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIVLCG 124
Query: 208 TKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
K D +P I + +Y + + SA N N K F ++ ++
Sbjct: 125 NKVD----VP---SRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRI 171
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
KI ++GD +GK++ L +Y +E G+ + + +EG + IW+ G
Sbjct: 13 FKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQE 72
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIP-VLIGTKFDDFIQ 215
+ + +V L+++D++ R T SV W E + + T + +L+G K
Sbjct: 73 RFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNK------ 126
Query: 216 LPIDLQWTIASEARTYAKALNAT--LFF--SSATYNINVNKIFKFITAKLF 262
DL+ +I + + KAL T LFF +SA + NV F+ + ++
Sbjct: 127 --CDLE-SIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIY 174
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GKT L ++ +E G+ KTLV++ + IW+ G
Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKFDDFIQ 215
+ + +V ++++D+T R + + + W +E R ++ + +LIG K D
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ +A+ +A+ N +SA NV F I +++
Sbjct: 132 -LGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIY 177
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + ++ +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF----KFITAKLFDLPWTVE 269
+ + S+ + A F +SA N+NV ++F K I +L D E
Sbjct: 132 MDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAE 189
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + ++ +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF----KFITAKLFDLPWTVE 269
+ + S+ + A F +SA N+NV ++F K I +L D E
Sbjct: 132 MDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAE 189
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + ++ +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF----KFITAKLFDLPWTVE 269
+ + S+ + A F +SA N+NV ++F K I +L D E
Sbjct: 132 MDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAE 189
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
+S KI L+GD +GK+S L+ ++ E G++ K + V G R+ IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLLSFISSSVED-LAPTIGVDFKIKQMKVRGKRLKLTIWDTAG 70
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCT-LNSVLGWYKEARKW--NQTAIPVLIGTKFD 211
K + S I++++D+T R T LN W KE + N I +L+G K D
Sbjct: 71 QEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVD 130
Query: 212 DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVE 269
+ + + E AK LN SA NVN F+ + K+ ++P +E
Sbjct: 131 RESERKVSRE-----EGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
+S KI L+GD +GK+S L+ ++ E G++ K + V G R+ IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLLSFISSSVED-LAPTIGVDFKIKQMKVRGKRLKLTIWDTAG 70
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCT-LNSVLGWYKEARKW--NQTAIPVLIGTKFD 211
K + S I++++D+T R T LN W KE + N I +L+G K D
Sbjct: 71 QEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVD 130
Query: 212 DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVE 269
+ + + E AK LN SA NVN F+ + K+ ++P +E
Sbjct: 131 RESERKVSRE-----EGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
+S KI L+GD +GK+S L+ ++ E G++ K + V G R+ IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLLSFISSSVED-LAPTIGVDFKIKQMKVRGKRLKLTIWDTAG 70
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCT-LNSVLGWYKEARKW--NQTAIPVLIGTKFD 211
K + S I++++D+T R T LN W KE + N I +L+G K D
Sbjct: 71 QEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVD 130
Query: 212 DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVE 269
+ + + E AK LN SA NVN F+ + K+ ++P +E
Sbjct: 131 RESERKVSRE-----EGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ ++GD +GKT L ++ +E G+ +T+ + G + IW+ G
Sbjct: 29 FKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQE 88
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARK-WNQTAIPVLIGTKFDDFIQ 215
+ + ++ ++++D+T R + + V W +E R + +A+ +L+G K D
Sbjct: 89 RYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKAD---- 144
Query: 216 LPIDLQWTIASEARTYAKALNATLFFS--SATYNINVNKIFKFITAKLF 262
L + + +A +A+ LFFS SA NV++ F + ++F
Sbjct: 145 LSVGKRAVPTEDAVEFAETQR--LFFSEVSALSGGNVDEAFFRLLEEIF 191
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + S+ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVF 170
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 98 KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGK 157
K+ LGD +GKTS + ++ + + G++ + KT E +W+ G +
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 158 TDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKFDDFIQL 216
+P +DS +I++D+ S+ + + W +E R + I VL+G K D +
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNKR 128
Query: 217 PIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFD---LPWTVERNL 272
+ ++ E A+ A +SA N+ +F IT+ L + WT + +L
Sbjct: 129 QVSIE-----EGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDL 182
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L+++ D + G++ +T+ +G I IW+ G
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQE 68
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDFIQ 215
+ + + I+I++D T + N+V W E ++ N++ +LIG K +D ++
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNK-NDMVE 127
Query: 216 LPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ +++E R A L +SA +INV + F I ++
Sbjct: 128 SKV-----VSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEI 169
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
KI ++GD +GK++ L +Y +E G+ ++++++G + IW+ G
Sbjct: 13 FKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQE 72
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIP-VLIGTKFDDFIQ 215
+ + +V L+++D+T T +V W E + T + +LIG K D
Sbjct: 73 RFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCD---- 128
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
++ E ++ A++ +SA + NV F+ + +++
Sbjct: 129 -LESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIY 174
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 98 KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGK 157
K+ L+GD +GK++ L ++ +E G+ +++ V+ + IW+ G +
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 158 TDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQL 216
+ +V L+++D+T T +V W KE R + I + L+G K D
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKAD----- 129
Query: 217 PIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ +A+ +A+ N +SA +NV F + ++++
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIY 175
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 87 THDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARIS 146
T++ E D + K L+GD +GK++ L ++ DE G+ + + V I
Sbjct: 5 TYEEECDYL-FKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63
Query: 147 YCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVL 205
IW+ G + + ++ L+++D+T R T +++ W E R + N + VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123
Query: 206 IGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
+G K D ++ E +T A++ +SA N+NV + F + ++ ++
Sbjct: 124 VGNKSDLRQSREVE-----EDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEV 177
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + ++ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + ++ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + ++ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVF 170
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +++ V+ + IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVL-IGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R I ++ +G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ +A+ +A+ N +SA ++NV F + ++++
Sbjct: 130 -LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIY 175
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
D S K+ ++GD GKT+F+ +++ E E+ G+ +I + W+
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDD 212
G K +IMFD+T+R T +V W+++ + + VL G K D
Sbjct: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD- 128
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ ++ T+ + N + SA N N K F ++ KL
Sbjct: 129 ------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
D S K+ ++GD GKT+F+ +++ E E+ G+ +I + W+
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDD 212
G K +IMFD+T+R T +V W+++ + + VL G K D
Sbjct: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD- 128
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ ++ T+ + N + SA N N K F ++ KL
Sbjct: 129 ------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
D S K+ ++GD GKT+F+ +++ E E+ G+ +I + W+
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDD 212
G K +IMFD+T+R T +V W+++ + + VL G K D
Sbjct: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD- 128
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ ++ T+ + N + SA N N K F ++ KL
Sbjct: 129 ------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 171
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 89 DFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYC 148
D E D + K+ L+GD +GK++ L ++ +E G+ KT VEG +
Sbjct: 7 DEEYDYL-FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQ 65
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIG 207
IW+ G + + +V L+++D+T T + W +E R I V LIG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIG 125
Query: 208 TKFDDFIQLPIDLQWTIA---SEARTYAKALNATLFFSSATYNINVNKIF 254
K DL+ +A EA+ +A+ + +SA NV F
Sbjct: 126 NK--------CDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAF 167
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ ++L V I IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W +E R I V L+G K D ++
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD--LR 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKLF 262
+ +Q +A+++A+ N +L+F +SA + NV F + +++
Sbjct: 132 HLVAVQ---TEDAKSFAE--NESLYFMETSALESTNVENAFSEVLTQIY 175
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L+++ D + G++ +T+ +G I IW+ G
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDFIQ 215
+ + + I++ +D+T + N+V W E ++ ++ +L+G K D
Sbjct: 69 RFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCD---- 124
Query: 216 LPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ Q +++E A+ +A L +SA NV + F +TA +
Sbjct: 125 --LTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L+++ D + G++ +T+ +G I IW+ G
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDFIQ 215
+ + + I++ +D+T + N+V W E ++ ++ +L+G K D
Sbjct: 69 RFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKND---- 124
Query: 216 LPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ Q +++E A+ +A L +SA NV + F +TA +
Sbjct: 125 --LTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +++ V+ I +W+ G
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R + + L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ EAR++++ N +SA NV + F + +++
Sbjct: 130 -LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIY 175
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 86 HTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARI 145
++D E D + K L+GD +GK++ L ++ DE G++ + + V I
Sbjct: 4 ESYDEECDYL-FKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTI 62
Query: 146 SYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQ-TAIPV 204
IW+ G + + ++ L+++D+T R T ++ W E R ++ + V
Sbjct: 63 KAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVV 122
Query: 205 LIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
L+G K D ++ + E +T A++ +SA N NV + F + ++ ++
Sbjct: 123 LVGNKSDLGQSREVEEE-----EGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEV 177
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L GD +GK++ L ++ ++ G+ +++ + + IW+ G
Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R I + L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ EA+ +A+ N +SA +NV+ F + +++
Sbjct: 130 -LRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIY 175
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L GD +GK++ L ++ ++ G+ +++ V+ + IW+ G
Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R + + +L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ E + +A+ N +SA INV F + +++
Sbjct: 130 -LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIY 175
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ ++L V+ I IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R I V L+G K D ++
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD--LR 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ +Q +A+++A+ + +SA NV F
Sbjct: 132 HLVAVQ---TEDAKSFAEKESLYFMETSALEATNVENAF 167