Miyakogusa Predicted Gene

Lj3g3v2902980.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2902980.3 Non Chatacterized Hit- tr|H0SZN2|H0SZN2_9BRAD
Putative carboxymethylenebutenolidase
OS=Bradyrhizobiu,34.45,1e-18,DLH,Dienelactone hydrolase;
ENDO-1,3-1,4-BETA-D-GLUCANASE,NULL; DIENELACTONE HYDROLASE,NULL;
alpha/b,CUFF.44923.3
         (247 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32520.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   286   8e-78
AT1G35420.2 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    62   5e-10
AT1G35420.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    61   6e-10

>AT2G32520.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr2:13805823-13807442 REVERSE LENGTH=239
          Length = 239

 Score =  286 bits (733), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 151/242 (62%), Positives = 176/242 (72%), Gaps = 25/242 (10%)

Query: 25  IADSAAPFHKIQIQREDTKFDAYVVGKHDAPGIVVLQDWLGVDNEIKDHALRISQLGRGF 84
           +ADSA  F KIQIQR+DT FDAYVVGK DAPGIVV+Q+W GVD EIK+HA++ISQL  GF
Sbjct: 1   MADSA--FRKIQIQRDDTTFDAYVVGKDDAPGIVVIQEWWGVDFEIKNHAIKISQLEPGF 58

Query: 85  KALIPDLHRG-------NAKQLFRGRDWTGTIEDVISSVNWLKNNGSEKVGVTGFRMGGA 137
           KALIPDL+RG        A+ L  G DW G I+D+ +SVNWLK+NGS+KVGVTG  MGGA
Sbjct: 59  KALIPDLYRGKVGLDTAEAQHLMDGLDWPGAIKDIRASVNWLKSNGSKKVGVTGMCMGGA 118

Query: 138 LAIASSNMISDLNVDAIVAFYGVPCSL---DGNGRFPVQAHFGELDEFVGFSDVTAVKRL 194
           LAIASS ++ +  VDA+V FYG P S        + P+QAHFGELD FVGFSDVTA K L
Sbjct: 119 LAIASSVLVPE--VDAVVGFYGTPSSELADPAQAKAPIQAHFGELDNFVGFSDVTAAKNL 176

Query: 195 EEKLKDSGAPHEIHIYPGKRHAFMN-----------MRMHDEDDAAVQLAWSRFQSWMTT 243
           EEKLK SG  HE+HIYPG  HAF+N           M + DED+AAV+LAWSRF SWM  
Sbjct: 177 EEKLKASGVAHEVHIYPGNGHAFLNRSPEGVSRRKSMGLSDEDEAAVELAWSRFTSWMKQ 236

Query: 244 YL 245
           YL
Sbjct: 237 YL 238


>AT1G35420.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr1:13026320-13027463 FORWARD LENGTH=315
          Length = 315

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 26/215 (12%)

Query: 49  VGKHDAPGIVVLQDWLGV-DNEIKDHALRISQLGRGFKALIPDLHRGNA----------K 97
           V  ++  G+++L D  G  D+  +D A R++    G+  L+PDL RG+           +
Sbjct: 108 VKNNNGTGLLLLSDVFGFQDSATRDFAYRVAC--NGYNVLVPDLFRGDPWSKNRPKSEYE 165

Query: 98  QLFRGRDWTGTIEDVISSVNWLKNNG-----SEKVGVTGFRMGGALAIASSNMISDLNVD 152
           +  RG D     +D  +   W+         S+K+GV GF  GG   +            
Sbjct: 166 EWRRGHDPNRIRQDTTTFTKWMVEEFAAAGISKKLGVMGFCFGGGRVVDVLATDESGYFS 225

Query: 153 AIVAFYG--VPCSLDGNGRFPVQAHFGELDEFVGFSDVTAVKRLEEKLKDSGAPHEIHIY 210
             V+FYG  +  ++ G+ + PV    G+ D      +V  +  +EEK+   G   ++ +Y
Sbjct: 226 TGVSFYGTRIDSAVAGDVKVPVLFIAGDRDPLC---EVKGLYEIEEKI---GEGSKVVVY 279

Query: 211 PGKRHAFMNMRMHDEDDAAVQLAWSRFQSWMTTYL 245
            G+ H F++     EDD   + A++  ++W+  +L
Sbjct: 280 EGRGHGFVHRPETPEDDRDAEEAFALMRNWLHHHL 314


>AT1G35420.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr1:13026320-13027463 FORWARD LENGTH=310
          Length = 310

 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 26/215 (12%)

Query: 49  VGKHDAPGIVVLQDWLGV-DNEIKDHALRISQLGRGFKALIPDLHRGNA----------K 97
           V  ++  G+++L D  G  D+  +D A R++    G+  L+PDL RG+           +
Sbjct: 103 VKNNNGTGLLLLSDVFGFQDSATRDFAYRVAC--NGYNVLVPDLFRGDPWSKNRPKSEYE 160

Query: 98  QLFRGRDWTGTIEDVISSVNWLKNNG-----SEKVGVTGFRMGGALAIASSNMISDLNVD 152
           +  RG D     +D  +   W+         S+K+GV GF  GG   +            
Sbjct: 161 EWRRGHDPNRIRQDTTTFTKWMVEEFAAAGISKKLGVMGFCFGGGRVVDVLATDESGYFS 220

Query: 153 AIVAFYG--VPCSLDGNGRFPVQAHFGELDEFVGFSDVTAVKRLEEKLKDSGAPHEIHIY 210
             V+FYG  +  ++ G+ + PV    G+ D      +V  +  +EEK+   G   ++ +Y
Sbjct: 221 TGVSFYGTRIDSAVAGDVKVPVLFIAGDRDPLC---EVKGLYEIEEKI---GEGSKVVVY 274

Query: 211 PGKRHAFMNMRMHDEDDAAVQLAWSRFQSWMTTYL 245
            G+ H F++     EDD   + A++  ++W+  +L
Sbjct: 275 EGRGHGFVHRPETPEDDRDAEEAFALMRNWLHHHL 309