Miyakogusa Predicted Gene

Lj3g3v2888680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888680.1 Non Chatacterized Hit- tr|I1LRS5|I1LRS5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26747
PE,72.42,0,TraB,Pheromone shutdown, TraB; seg,NULL; SUBFAMILY NOT
NAMED,NULL; PHEROMONE SHUTDOWN PROTEIN,NULL,CUFF.44939.1
         (410 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G05270.1 | Symbols:  | TraB family protein | chr1:1531806-153...   398   e-111
AT2G32340.1 | Symbols:  | TraB family protein | chr2:13732247-13...   365   e-101
AT5G52030.2 | Symbols:  | TraB family protein | chr5:21128291-21...   106   2e-23
AT5G52030.1 | Symbols:  | TraB family protein | chr5:21128819-21...    88   9e-18

>AT1G05270.1 | Symbols:  | TraB family protein |
           chr1:1531806-1534305 REVERSE LENGTH=371
          Length = 371

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/338 (60%), Positives = 250/338 (73%), Gaps = 20/338 (5%)

Query: 58  QPPESGAPVAGNEDFVHVHD---LNMESLSDSMVRIDEP-------------SSDXXXXX 101
           Q P S   V   EDFVH+ D       SLSDS+V +++              S       
Sbjct: 7   QSPSSEPEVHSGEDFVHIDDPRPTGDISLSDSIVNVEKDELLDEAAEEEFRGSDSVFSGG 66

Query: 102 XXXXXXXXGPESLLDATYYRPESLPEELSRNVIVLTCESATADEGLCNVYLVGTAHVSEE 161
                   G E   +AT      LPEEL+++V++LTCES TAD G C+VYLVGTAHVS++
Sbjct: 67  DGGGADDDGGECSSEATKVE---LPEELAKSVVILTCES-TADGGSCDVYLVGTAHVSKQ 122

Query: 162 SSREVQAIVSYLKPEVVFLELCSSRVAVLTPQILKVPTFGEMIAMMKKKHNMFEVLYGSF 221
           S  EV+AI+S LKPEVVF+ELCSSR++VL PQ LK+PT  +MI   K+K N F +LYG F
Sbjct: 123 SCLEVEAIISILKPEVVFVELCSSRLSVLKPQTLKIPTMSDMIESWKQKQNTFGILYGWF 182

Query: 222 LAKIASRLEVFPGSEFRVAYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWHKTKLVYNL 281
           LAKIAS LEVFPG+EFRVAYEEAIKYGG+VILGDRPVQITLKRTW+KMPLWHK K +Y++
Sbjct: 183 LAKIASHLEVFPGAEFRVAYEEAIKYGGKVILGDRPVQITLKRTWAKMPLWHKVKFLYSI 242

Query: 282 LFQAVFLPSSDDLNKMLKEMDDNDMLTLVIQEMSKEFPTLMETLVHERDKYMSCALLRVA 341
           LFQAVFLP +++L KMLK+MD+ DM+TLVIQEMSKEFPTLM+T+VHERD+YM+ +LLRVA
Sbjct: 243 LFQAVFLPGAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVA 302

Query: 342 CQNSCVVAVVGKGHLQGIKKHWKQHVVMSDLMTIPSPK 379
             +S VVAV+GKGH+ GIKK+WKQ + M+DLM IPS K
Sbjct: 303 SDHSSVVAVIGKGHINGIKKNWKQPITMNDLMEIPSDK 340


>AT2G32340.1 | Symbols:  | TraB family protein |
           chr2:13732247-13734361 FORWARD LENGTH=360
          Length = 360

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/258 (67%), Positives = 215/258 (83%), Gaps = 6/258 (2%)

Query: 125 LPEELSRNVIVLTCESATADEGLCNVYLVGTAHVSEESSREVQAIVSYLKPEVVFLELCS 184
           LPEE +++V+VLTCES TA+ G C+VYLVGTAHVS+ES REV+A++S LKP+ VFLELCS
Sbjct: 73  LPEEFAKSVMVLTCES-TAEGGSCDVYLVGTAHVSQESCREVEAVISALKPQAVFLELCS 131

Query: 185 SRVAVLTPQILKV-----PTFGEMIAMMKKKHNMFEVLYGSFLAKIASRLEVFPGSEFRV 239
           SR+++LTPQ +KV     PT+ EMI M KKKHN+FE++YG  LAK A +LEVFPG+EFRV
Sbjct: 132 SRLSILTPQTVKVCCQEPPTWMEMIYMWKKKHNLFEIVYGYILAKAAKKLEVFPGAEFRV 191

Query: 240 AYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWHKTKLVYNLLFQAVFLPSSDDLNKMLK 299
            +EEA KYGGRV LGDR VQITL+RTW KMPLWHK KLVY+++ QAVFLP+  +L KMLK
Sbjct: 192 GFEEANKYGGRVFLGDRSVQITLQRTWGKMPLWHKIKLVYSIVSQAVFLPNPKELEKMLK 251

Query: 300 EMDDNDMLTLVIQEMSKEFPTLMETLVHERDKYMSCALLRVACQNSCVVAVVGKGHLQGI 359
           ++ D DMLTL IQEMS EFPTLMETLVHERDKYM+  LLR+A ++S VVAVVG+GHLQGI
Sbjct: 252 DLGDGDMLTLAIQEMSTEFPTLMETLVHERDKYMAYQLLRIASEHSSVVAVVGRGHLQGI 311

Query: 360 KKHWKQHVVMSDLMTIPS 377
           KK+W Q + + +LM +P+
Sbjct: 312 KKNWNQTINIKELMELPT 329


>AT5G52030.2 | Symbols:  | TraB family protein |
           chr5:21128291-21130034 FORWARD LENGTH=402
          Length = 402

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 117/245 (47%), Gaps = 38/245 (15%)

Query: 150 VYLVGTAHVSEESSREVQAIVSYLKPEVVFLELCSSRVAVLTPQ------ILKVPTFGEM 203
           ++LVGT+H+S ES+  V+ +V  +KP+ V +ELC SR      Q      I+   + G  
Sbjct: 94  IWLVGTSHISPESASIVERVVRTVKPDNVAVELCRSRKVQFFIQTKFGAGIMYTSSVGGE 153

Query: 204 IAMMKKKHNMFEVLYGSFLAKIASRLE--------------VFP-----------GSEFR 238
           +    K   +     G FL  +   L+              VF            G EFR
Sbjct: 154 VDQNLKSGELSLTGTG-FLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVADRPFGDEFR 212

Query: 239 VAYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWHKTKLVYNLLFQAVFLPSSDDLNKML 298
            A + + + G +++LGDRP++ITL+R W+ +    K  LV  +    V   SS      L
Sbjct: 213 AARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLV--MAVTRVITSSSGISAAEL 270

Query: 299 KEM--DDNDMLTLVIQEMSKEFPTLMETLVHERDKYMSCALLRVACQNSC--VVAVVGKG 354
           KE   D+N     + + +S  +P L+  L+HERD Y++ +L R    N C  VV V+GKG
Sbjct: 271 KEQETDENSGSLQLYERLSFSYPALLMPLIHERDTYLAWSLKRSKAVNGCKTVVGVIGKG 330

Query: 355 HLQGI 359
           H+ G+
Sbjct: 331 HMNGV 335


>AT5G52030.1 | Symbols:  | TraB family protein |
           chr5:21128819-21130034 FORWARD LENGTH=258
          Length = 258

 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 6/143 (4%)

Query: 221 FLAKIASRLEVFPGSEFRVAYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWHKTKLVYN 280
           F +K++S  +   G EFR A + + + G +++LGDRP++ITL+R W+ +    K  LV  
Sbjct: 51  FSSKLSSVADRPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLV-- 108

Query: 281 LLFQAVFLPSSDDLNKMLKEM--DDNDMLTLVIQEMSKEFPTLMETLVHERDKYMSCALL 338
           +    V   SS      LKE   D+N     + + +S  +P L+  L+HERD Y++ +L 
Sbjct: 109 MAVTRVITSSSGISAAELKEQETDENSGSLQLYERLSFSYPALLMPLIHERDTYLAWSLK 168

Query: 339 RVACQNSC--VVAVVGKGHLQGI 359
           R    N C  VV V+GKGH+ G+
Sbjct: 169 RSKAVNGCKTVVGVIGKGHMNGV 191