Miyakogusa Predicted Gene

Lj3g3v2888630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888630.1 tr|A8J251|A8J251_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_191680 PE=4
SV=1,36.77,0.000000000001,seg,NULL,CUFF.44912.1
         (264 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21865.1 | Symbols: PEX22 | peroxin 22 | chr3:7701308-7703218...   335   2e-92

>AT3G21865.1 | Symbols: PEX22 | peroxin 22 | chr3:7701308-7703218
           REVERSE LENGTH=283
          Length = 283

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 181/282 (64%), Positives = 215/282 (76%), Gaps = 21/282 (7%)

Query: 3   MADSSK----EEFLQLIKRLT----LKISNI--------IDSHSIGAVAGLAIAIFFTWR 46
           MA+SS     EE ++LIKRL+     K+S++        +DS SIGA+AGLAIA+ FTWR
Sbjct: 1   MAESSSPSPTEEIVRLIKRLSAYVAFKMSSLFSTTSIRNLDSRSIGAIAGLAIAVIFTWR 60

Query: 47  LLRSPGEPQPRQR-----KRQTTTSSNPGVSTHSNAXXXXXXXXXXXXXXXAQNVVDELF 101
            +R+PGE + R++         T+S+    S  + A                Q+VVD+ F
Sbjct: 61  AIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQFF 120

Query: 102 QPVKPTLGQIVRQKLNEGRKVTCRLLGVILEETSPEELQKQVTVKSTVLEVLLEITKFCD 161
           QPVKPTLGQIVRQKL+EGRKVTCRLLGVILEETSPEELQKQ TV+S+VLEVLLEITK+ D
Sbjct: 121 QPVKPTLGQIVRQKLSEGRKVTCRLLGVILEETSPEELQKQATVRSSVLEVLLEITKYSD 180

Query: 162 LYLMERVLDDESEKRVLVALEDAGVFTSGGLVKDKVLFCSTEIGRSSFVRQLEPDWHIDS 221
           LYLMERVLDDESE +VL ALE+AGVFTSGGLVKDKVLFCSTEIGR+SFVRQLEPDWHID+
Sbjct: 181 LYLMERVLDDESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWHIDT 240

Query: 222 NPEIISQLARFIKYQLHVSPFRTERTAANVFSAPSLEQFFGS 263
           NPEI +QLARFIKYQLHV+  + ERTA NVF++ S+EQFFGS
Sbjct: 241 NPEISTQLARFIKYQLHVATVKPERTAPNVFTSQSIEQFFGS 282