Miyakogusa Predicted Gene
- Lj3g3v2888330.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2888330.1 Non Chatacterized Hit- tr|I1LRU2|I1LRU2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,79.91,0,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL; no description,Tetrat,gene.g49873.t1.1
(630 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 498 e-141
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 484 e-137
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 484 e-137
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 484 e-137
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 483 e-136
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 482 e-136
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 478 e-135
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 478 e-135
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 476 e-134
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 464 e-130
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 462 e-130
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 459 e-129
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 456 e-128
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 445 e-125
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 443 e-124
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 442 e-124
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 440 e-123
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 440 e-123
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 434 e-122
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 434 e-121
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 426 e-119
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-118
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 422 e-118
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 416 e-116
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-116
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 411 e-115
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 409 e-114
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 397 e-110
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 393 e-109
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 392 e-109
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 385 e-107
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 382 e-106
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 379 e-105
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 372 e-103
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 367 e-101
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 366 e-101
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 1e-99
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 358 9e-99
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 356 3e-98
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 348 6e-96
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 347 1e-95
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 4e-95
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 3e-94
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 4e-93
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 5e-90
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 5e-90
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 7e-90
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 327 2e-89
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 321 9e-88
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 312 4e-85
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 7e-85
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 5e-84
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 1e-82
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 5e-81
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 5e-81
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 4e-79
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 1e-78
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 8e-78
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 9e-78
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 2e-77
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 286 3e-77
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 2e-76
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 8e-76
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 4e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 278 8e-75
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 273 2e-73
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 271 1e-72
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 7e-72
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 253 4e-67
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 244 9e-65
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 244 1e-64
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 6e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 9e-63
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 227 2e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 193 3e-49
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 103 4e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 100 3e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 6e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 9e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 7e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 7e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 1e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 8e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 3e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 82 1e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 79 1e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 78 2e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 76 7e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 76 7e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 71 2e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 4e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 1e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/663 (39%), Positives = 385/663 (58%), Gaps = 38/663 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+P A +F I N +WN+M RG+A S+ S+ L LY M+S G +++T+PFV
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSA---LKLYVCMISLGLLPNSYTFPFV 140
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDK------ 114
LK+C + G ++HG V+ G + D+YV SLISMY++ G + A VFDK
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 115 -------------------------MPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRS 149
+PV+D+ SWN M+SGY + G +A +F M ++
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 150 GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
+ D +TM+ ++SAC ++LG+ VH ++ + +N + N++ID+Y C +
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWI--DDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A LFE L KD +SWN+LI GY + L LF +M G P++VT++S+L AC+
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 270 RISALLLGSSVHSYLVKKGYGMNTA--VGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
+ A+ +G +H Y+ K+ G+ A + TSLI MYA CG AH+ FN I KSL+SW
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
M+ GF +HG+ + +F+ M I PD+ F +LSACSHSG++D G+ IF MT+
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
DY + P HY C++DLLG +G EA I+ M+++P+ +W +LL AC++H NV+L E
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 448 ISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMV 507
A+ L +++P YV LSNIYA+ RW P S E++ +V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 508 HQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLA 567
H+F GD H ++ +IY L+++ L+K G++PDTS VL ++E E KE L HSE+LA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 568 LAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCG 627
+AF LI+T PGT + I KNLRVC +CH K++SK+ REII RD RFHHFRDG+CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 628 GYW 630
YW
Sbjct: 739 DYW 741
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/661 (37%), Positives = 383/661 (57%), Gaps = 39/661 (5%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPFVLK 62
A+ +FD+I NSF WN++IR YA G S+ + +M+S Q N +T+PF++K
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYA---SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
A ++ +G +HG+ V + SDV+V NSLI Y GD+ +A VF + +D+ S
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN+M++G+V+ G A +F M + TM+ +LSAC + +L+ G+ V Y+
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE---------------GLAV------- 220
N R++ N + N+M+DMY C I A++LF+ G A+
Sbjct: 260 EN--RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 221 ---------KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP-DEVTVISVLGACSR 270
KD V+WN+LIS YE+ G + L +F ++ + + +++T++S L AC++
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
+ AL LG +HSY+ K G MN V ++LI MY+ CG + FN + + + W+ M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 331 VTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYN 390
+ G +HG G EA+ +F +M N+ P+ FT V ACSH+GLVDE + +F++M +Y
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 391 VEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISA 450
+ P HY+C+VD+LGR+G L++A I+ M + P+ VW ALL AC++H N+ LAE++
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 451 QKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQF 510
+L E++P +V LSNIYA +W P S E++ M+H+F
Sbjct: 558 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 617
Query: 511 FAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDV-EAEVKEKMLWDHSERLALA 569
+GD +H S+ +Y KL ++ E+LK GY P+ S VL + E E+KE+ L HSE+LA+
Sbjct: 618 LSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAIC 677
Query: 570 FALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGY 629
+ LI+T IR+ KNLRVC DCH+V K++S+L REII+RD RFHHFR+G CSC +
Sbjct: 678 YGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDF 737
Query: 630 W 630
W
Sbjct: 738 W 738
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 200/407 (49%), Gaps = 40/407 (9%)
Query: 69 LREMGIRVHGLVVVDGLESDVYVGNSLISMYL--KFGDMGTARLVFDKMPVRDLTSWNTM 126
LR++ + HG ++ G SD Y + L +M F + AR VFD++P + +WNT+
Sbjct: 43 LRQLK-QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 127 MSGYVKNGEAGDAFVVF-DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
+ Y + + F D + S + T L+ A ++ L LG+++HG V+++
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
+ ++ FV NS+I Y +C + A K+F + KD VSWNS+I+G+ + G + LEL
Sbjct: 162 --VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F +M VT++ VL AC++I L G V SY+ + +N + +++ MY
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGI----------------------------- 336
CGS A R F+ + +K +WT M+ G+ I
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 337 --HGKGREAISIFNEM-LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP 393
+GK EA+ +F+E+ L KN+ ++ + LSAC+ G ++ G+ I + + + +
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI-HSYIKKHGIRM 398
Query: 394 TTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
S L+ + + G L+++ ++++ K + VW+A++ +H
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/628 (39%), Positives = 367/628 (58%), Gaps = 9/628 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFG-QKADNFTYPFVLK 62
A+ +FD++ K++ LWN+MI GY S+ ++R++++ + D T +L
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYR---KNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
A +L +G+++H L G S YV IS+Y K G + +F + D+ +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
+N M+ GY NGE + +F + SG +T+++L+ G LM L A+HGY +
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCL 346
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+++ ++ V+ ++ +Y + I ARKLF+ K SWN++ISGY + G
Sbjct: 347 KSN--FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ LF +M P+ VT+ +L AC+++ AL LG VH + + + V T+LI M
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 464
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CGS A R F+ + K+ +W M++G+G+HG+G+EA++IF EML ITP F
Sbjct: 465 YAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTF 524
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
VL ACSH+GLV EG EIF M Y EP+ HY+C+VD+LGRAG L A I+ M
Sbjct: 525 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS 584
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
++P VW LL ACR+H++ LA ++KLFE+DP+ V +V LSNI++A++ +
Sbjct: 585 IEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAAT 644
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
P Y+ E+ + H F +GD SH Q +IY KL+ L ++++ GY P+
Sbjct: 645 VRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE 704
Query: 543 TSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
T L+DVE E +E M+ HSERLA+AF LI T PGT IRI KNLRVC+DCHTV K++SK
Sbjct: 705 TELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISK 764
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
+ R I++RD RFHHF+DG+CSCG YW
Sbjct: 765 ITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 224/438 (51%), Gaps = 10/438 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ IF + + FL+N ++RG++ + +SS R+ S K ++ TY F + A
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRK--STDLKPNSSTYAFAISA 128
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
G +HG VVDG +S++ +G++++ MY KF + AR VFD+MP +D W
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 124 NTMMSGYVKNGEAGDAFVVF-DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
NTM+SGY KN ++ VF D + S D TT+L +L A +L +L+LG +H
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ ++++V I +Y C I LF D V++N++I GY G
Sbjct: 249 KTG--CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS 306
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
L LF ++ + GA T++S++ L+L ++H Y +K + + +V T+L ++
Sbjct: 307 LSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y+ A + F+E P+KSL SW M++G+ +G +AIS+F EM +P+
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
T +LSAC+ G + GK + + + R + E + + L+ + + G + EA D M
Sbjct: 424 TCILSACAQLGALSLGKWV-HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 423 LKPNEDVWTALLSACRLH 440
K NE W ++S LH
Sbjct: 483 -KKNEVTWNTMISGYGLH 499
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 171/401 (42%), Gaps = 46/401 (11%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
+ H +++ G +D+ + L G + AR +F + D+ +N +M G+ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 135 EAGDAFVVFDHMRRS-GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
+ VF H+R+S L + +T +SA D + G+ +HG V + ++E
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG---CDSEL 154
Query: 194 VTNS-MIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+ S ++ MY + ARK+F+ + KDT+ WN++ISGY K + +++F +
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 253 GAVP-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
D T++ +L A + + L LG +HS K G + V T IS+Y+ CG
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM--------------------- 350
F E + ++ M+ G+ +G+ ++S+F E+
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 351 -----------LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYS 399
L N V TA+ + S ++ +++F D + E + ++
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF-----DESPEKSLPSWN 389
Query: 400 CLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSAC 437
++ + G ++A + M+ PN T +LSAC
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/628 (39%), Positives = 369/628 (58%), Gaps = 6/628 (0%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ ++ WNS+I GY + + + L ++ +ML G + D T V
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNG---LAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C D L +G VH + V + N+L+ MY K GD+ +A+ VF +M R + S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
+M++GY + G AG+A +F+ M G+ D T+ A+L+ C L GK VH ++
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N L + FV+N+++DMY C + A +F + VKD +SWN++I GY K A + L
Sbjct: 426 ND--LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 244 ELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
LF + PDE TV VL AC+ +SA G +H Y+++ GY + V SL+ M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG+ L AH F++I K L SWTVM+ G+G+HG G+EAI++FN+M I DE F
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
++L ACSHSGLVDEG F M + +EPT HY+C+VD+L R G L +AY I+NM
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
+ P+ +W ALL CR+H +VKLAE A+K+FE++P YV ++NIYA ++W
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
P S+ E+ V+ F AGD+S+ ++++I A L+ + ++ + GY P
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPL 783
Query: 543 TSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
T L D E KE+ L HSE+LA+A +I++G G IR+TKNLRVC DCH + K +SK
Sbjct: 784 TKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSK 843
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
L REI++RD RFH F+DG CSC G+W
Sbjct: 844 LTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 236/442 (53%), Gaps = 10/442 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A +FD++ + + WN ++ A S S S+ L+++M+S G + D++T+ V
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSG---DFSGSIGLFKKMMSSGVEMDSYTFSCV 201
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
K+ L G ++HG ++ G VGNSL++ YLK + +AR VFD+M RD+
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN++++GYV NG A VF M SG+ D T++++ + C D + LG+AVH
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
V+ S + N+++DMY C + A+ +F ++ + VS+ S+I+GY + G A
Sbjct: 322 GVKAC--FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ ++LF +M G PD TV +VL C+R L G VH ++ + G + V +L+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML-GKNITPDE 359
MYA CGS A F+E+ K + SW ++ G+ + EA+S+FN +L K +PDE
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 360 GVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
VL AC+ D+G+EI Y M Y + + LVD+ + G L A+
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLF 557
Query: 419 DNMKLKPNEDVWTALLSACRLH 440
D++ K + WT +++ +H
Sbjct: 558 DDIASK-DLVSWTVMIAGYGMH 578
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 188/372 (50%), Gaps = 3/372 (0%)
Query: 53 DNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF 112
D T VL+ C D + G V + +G D +G+ L MY GD+ A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLK 172
D++ + WN +M+ K+G+ + +F M SG+ D T + + L +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
G+ +HG+++++ N+ V NS++ Y + ARK+F+ + +D +SWNS+I+G
Sbjct: 213 GGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
Y G A + L +F QM + G D T++SV C+ + LG +VHS VK +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
+L+ MY+ CG A F E+ D+S+ S+T M+ G+ G EA+ +F EM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
+ I+PD TAVL+ C+ L+DEGK + ++ ++ ++ + L+D+ + G +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 413 EAYATIDNMKLK 424
EA M++K
Sbjct: 450 EAELVFSEMRVK 461
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 483 bits (1243), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/614 (40%), Positives = 360/614 (58%), Gaps = 13/614 (2%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
WN +R A + S S+ LYR ML G D F++PF+LK+C L L G ++H
Sbjct: 21 WNVRLRELAYQS---LFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS--WNTMMSGYVKNGEA 136
V G E++ +V +LISMY K G + AR VF++ P S +N ++SGY N +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 137 GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTN 196
DA +F M+ +G+ D TML L+ C L LG+++HG V+ G L + V N
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK--GGLDSEVAVLN 195
Query: 197 SMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
S I MY C + R+LF+ + VK ++WN++ISGY + G A+ VLEL+ QM G P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
D T++SVL +C+ + A +G V + G+ N V + ISMYA CG+ A F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 317 NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD 376
+ +P KSL SWT M+ +G+HG G + +F++M+ + I PD VF VLSACSHSGL D
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 377 EGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
+G E+F M R+Y +EP HYSCLVDLLGRAG+LDEA I++M ++P+ VW ALL A
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 437 CRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPP 496
C++H+NV +AE++ K+ E +PN + YV +SNIY+ K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 497 SYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKE 556
YS+ E VH F AGD SH+Q+++++ L +L + ++ D E
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVS 549
Query: 557 KMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRF 616
+HSERLA+AF ++N+ PGT I + KNLRVC DCH +K VSK++ R+ ++RD RF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 617 HHFRDGICSCGGYW 630
H+F+DG+CSC YW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 150/322 (46%), Gaps = 6/322 (1%)
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
T WN + ++ ++ M RSG D + +L +C L G+ +H +
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE--GLAVKDTVSWNSLISGYEKCGG 238
V + G FV ++I MYC C ++ ARK+FE + + +V +N+LISGY
Sbjct: 79 VTK--GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+F +M G D VT++ ++ C+ L LG S+H VK G AV S
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
I+MY CGS R F+E+P K L +W +++G+ +G + + ++ +M + PD
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
+VLS+C+H G G E+ K+ P + + + R G L +A A
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVG-KLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 419 DNMKLKPNEDVWTALLSACRLH 440
D M +K WTA++ +H
Sbjct: 316 DIMPVKSLVS-WTAMIGCYGMH 336
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD++ K WN++I GY + + L LY +M S G D FT VL +C
Sbjct: 213 LFDEMPVKGLITWNAVISGY---SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L +++G V LV +G +V+V N+ ISMY + G++ AR VFD MPV+ L SW M
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGD--LMD--LKLGKAVHGYVV 182
+ Y +G ++FD M + G+ DG + +LSAC L D L+L +A +
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRA-----M 384
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLI 230
+ +L + ++D+ + A + E + V+ D W +L+
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/648 (37%), Positives = 371/648 (57%), Gaps = 41/648 (6%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
W S+IR C + S++L + EM + G+ D+ +P VLK+C ++ G VHG
Sbjct: 73 WKSVIR---CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGT------------------------------- 107
+V G++ D+Y GN+L++MY K MG+
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 108 -----ARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL 162
R VF+ MP +D+ S+NT+++GY ++G DA + M + L D T+ ++L
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 163 SACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD 222
+ +D+ GK +HGYV+R + ++ ++ +S++DMY I + ++F L +D
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
+SWNSL++GY + G + L LF QM P V SV+ AC+ ++ L LG +H
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 283 YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGRE 342
Y+++ G+G N + ++L+ MY+ CG+ A + F+ + SWT ++ G +HG G E
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
A+S+F EM + + P++ F AVL+ACSH GLVDE F MT+ Y + HY+ +
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 403 DLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVS 462
DLLGRAGKL+EAY I M ++P VW+ LLS+C +H+N++LAE A+K+F +D +
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 547
Query: 463 GYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDD 522
YV + N+YA+ RW P+ S+ E+ H F +GD SH D
Sbjct: 548 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDK 607
Query: 523 IYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIR 582
I LK + EQ++K GY+ DTS VL+DV+ E K ++L+ HSERLA+AF +INT PGTTIR
Sbjct: 608 INEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIR 667
Query: 583 ITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+TKN+R+C DCH +K +SK+ REII+RD RFHHF G CSCG YW
Sbjct: 668 VTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 50/416 (12%)
Query: 95 LISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
+IS+Y + A L+F + + +W +++ + A F MR SG D
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 155 GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMY------------ 202
++L +C +MDL+ G++VHG++VR + + + N++++MY
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLG--MDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 203 -----------------------CNCDF-ISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
C F I R++FE + KD VS+N++I+GY + G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
L + +M PD T+ SVL S ++ G +H Y+++KG + +G+S
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ MYA + R F+ + + SW +V G+ +G+ EA+ +F +M+ + P
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
F++V+ AC+H + GK++ + R S LVD+ + G + A
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE------MDPNKVSGYVCLS 468
D M + +E WTA++ LH + A LFE + PN+V+ L+
Sbjct: 402 DRMNV-LDEVSWTAIIMGHALHGHGH----EAVSLFEEMKRQGVKPNQVAFVAVLT 452
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 40/277 (14%)
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY 233
K +H +R LS+ + +I +Y N + A LF+ L ++W S+I +
Sbjct: 24 AKQLHAQFIRTQS-LSHTS--ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 234 EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNT 293
+ L F +M G PD SVL +C+ + L G SVH ++V+ G +
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 294 AVGTSLISMYANC---GSFLCAHRAFNEIPD----------------------------- 321
G +L++MYA GS + F+E+P
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 322 ----KSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDE 377
K + S+ ++ G+ G +A+ + EM ++ PD ++VL S V +
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 378 GKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
GKEI + R ++ S LVD+ ++ +++++
Sbjct: 261 GKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDS 296
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/629 (39%), Positives = 370/629 (58%), Gaps = 11/629 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKA-DNFTYPFVLK 62
A+++FD++ ++ WN+MI GY C +G + +L S G +A D+ T +L
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGY-CQSGNAKEALTL-------SNGLRAMDSVTVVSLLS 255
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC + G+ +H + GLES+++V N LI +Y +FG + + VFD+M VRDL S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN+++ Y N + A +F MR S + D T+++L S L D++ ++V G+ +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
R G + + N+++ MY + AR +F L D +SWN++ISGY + G A +
Sbjct: 376 RK-GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 243 LELFGQMFIGGAVP-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+E++ M G + ++ T +SVL ACS+ AL G +H L+K G ++ V TSL
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY CG A F +IP + W ++ G HG G +A+ +F EML + + PD
Sbjct: 495 MYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F +LSACSHSGLVDEG+ F M DY + P+ HY C+VD+ GRAG+L+ A I +M
Sbjct: 555 FVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
L+P+ +W ALLSACR+H NV L +I+++ LFE++P V +V LSN+YA+ +W
Sbjct: 615 SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVD 674
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
P +S E++ V F+ G+ +H +++Y +L L +LK +GY+P
Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVP 734
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
D VL DVE + KE +L HSERLA+AFALI T TTIRI KNLRVC DCH+V K +S
Sbjct: 735 DHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFIS 794
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
K+ REII+RD RFHHF++G+CSCG YW
Sbjct: 795 KITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 242/442 (54%), Gaps = 21/442 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ FD I ++ + WN MI GY + + R L+ MLS G D T+P VLKA
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKA 162
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C ++ G ++H L + G DVYV SLI +Y ++ +G AR++FD+MPVRD+ SW
Sbjct: 163 CRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N M+SGY ++G A +A + + +R D T+++LLSAC + D G +H Y ++
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ L + FV+N +ID+Y + +K+F+ + V+D +SWNS+I YE + +
Sbjct: 276 HG--LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM-NTAVGTSLISM 302
LF +M + PD +T+IS+ S++ + SV + ++KG+ + + +G +++ M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEGV 361
YA G A FN +P+ + SW +++G+ +G EAI ++N M + I ++G
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRD---YNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
+ +VL ACS +G + +G ++ ++ ++ +V T+ L D+ G+ G+L++A +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS----LADMYGKCGRLEDALSLF 509
Query: 419 DNMKLKPNEDVWTALLSACRLH 440
+ + N W L++ H
Sbjct: 510 YQIP-RVNSVPWNTLIACHGFH 530
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 17/364 (4%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+H +VV +V + L+++Y G++ AR FD + RD+ +WN M+SGY + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 136 AGDAFVVFD-HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ + F M SGL D T ++L AC ++D G +H ++ + +V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG--FMWDVYV 187
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
S+I +Y + AR LF+ + V+D SWN++ISGY + G A + L L G
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN----GLR 243
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
D VTV+S+L AC+ G ++HSY +K G V LI +YA G +
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
F+ + + L SW ++ + ++ + AIS+F EM I PD ++ S S G
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 375 VDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WT 431
+ + + + + + + +E T + +V + + G +D A A + + PN DV W
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVV-MYAKLGLVDSARAVFNWL---PNTDVISWN 419
Query: 432 ALLS 435
++S
Sbjct: 420 TIIS 423
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/629 (37%), Positives = 376/629 (59%), Gaps = 8/629 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + F WN++IRGY+ N +L++Y M D+FT+P +LKA
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYS---RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV--RDLT 121
C L +MG VH V G ++DV+V N LI++Y K +G+AR VF+ +P+ R +
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SW ++S Y +NGE +A +F MR+ + D ++++L+A L DLK G+++H V
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V+ + + + S+ MY C ++ A+ LF+ + + + WN++ISGY K G A +
Sbjct: 249 VKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+++F +M PD +++ S + AC+++ +L S++ Y+ + Y + + ++LI
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
M+A CGS A F+ D+ + W+ M+ G+G+HG+ REAIS++ M + P++
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F +L AC+HSG+V EG F +M D+ + P HY+C++DLLGRAG LD+AY I M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
++P VW ALLSAC+ HR+V+L E +AQ+LF +DP+ YV LSN+YAA + W
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
S+ E+ + F GD SH + ++I +++ + +LK+ G++
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
+ + L+D+ E E+ L HSER+A+A+ LI+T GT +RITKNLR CV+CH K++S
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
KL+ REI++RD RFHHF+DG+CSCG YW
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 217/420 (51%), Gaps = 16/420 (3%)
Query: 49 GQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA 108
G +D+F + A L++ +H ++V GL+ ++ LI FGD+ A
Sbjct: 17 GIHSDSFYASLIDSATHKAQLKQ----IHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 109 RLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL 168
R VFD +P + WN ++ GY +N DA +++ +M+ + + D T LL AC L
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 169 MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD--TVSW 226
L++G+ VH V R + FV N +I +Y C + AR +FEGL + + VSW
Sbjct: 133 SHLQMGRFVHAQVFRLG--FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
+++S Y + G + LE+F QM PD V ++SVL A + + L G S+H+ +VK
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
G + + SL +MYA CG A F+++ +L W M++G+ +G REAI +
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR-DYNVEPTTTHYSCLVDLL 405
F+EM+ K++ PD T+ +SAC+ G +++ + ++ + R DY + + S L+D+
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMF 368
Query: 406 GRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE---MDPNKVS 462
+ G ++ A D L + VW+A++ LH + A IS + E + PN V+
Sbjct: 369 AKCGSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHGRAREA-ISLYRAMERGGVHPNDVT 426
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/608 (39%), Positives = 367/608 (60%), Gaps = 16/608 (2%)
Query: 37 RSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDG-LESDVYVGNSL 95
+L REM+ G + D FT VL AC L + G +H + +G L+ + +VG++L
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 96 ISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRS-GLVGD 154
+ MY + + R VFD M R + WN M++GY +N +A ++F M S GL+ +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 155 GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKL 214
TTM ++ AC +A+HG+VV+ L + FV N+++DMY I A ++
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRG--LDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 215 FEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM------FIGGAV-----PDEVTVIS 263
F + +D V+WN++I+GY L L +M GA P+ +T+++
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 264 VLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS 323
+L +C+ +SAL G +H+Y +K + AVG++L+ MYA CG + + F++IP K+
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 324 LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFY 383
+ +W V++ +G+HG G+EAI + M+ + + P+E F +V +ACSHSG+VDEG IFY
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 384 KMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE-DVWTALLSACRLHRN 442
M DY VEP++ HY+C+VDLLGRAG++ EAY ++ M N+ W++LL A R+H N
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
Query: 443 VKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFE 502
+++ EI+AQ L +++PN S YV L+NIY++ W P S+ E
Sbjct: 703 LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Query: 503 LNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDH 562
VH+F AGD+SH QS+ + L+ L E+++K GY+PDTS VL++VE + KE +L H
Sbjct: 763 HGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGH 822
Query: 563 SERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDG 622
SE+LA+AF ++NT PGT IR+ KNLRVC DCH K +SK++ REII+RD+ RFH F++G
Sbjct: 823 SEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNG 882
Query: 623 ICSCGGYW 630
CSCG YW
Sbjct: 883 TCSCGDYW 890
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 225/451 (49%), Gaps = 22/451 (4%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD+I +N WNS+I CS +L +R ML + +FT V+ AC +
Sbjct: 155 VFDRISERNQVSWNSLISSL-CSF--EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 67 LLLRE---MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L + E MG +VH + G E + ++ N+L++MY K G + +++++ RDL +W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
NT++S +N + +A M G+ D T+ ++L AC L L+ GK +H Y ++
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N G L N FV ++++DMYCNC + R++F+G+ + WN++I+GY + + L
Sbjct: 331 N-GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 244 ELF-GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
LF G G + + T+ V+ AC R A ++H ++VK+G + V +L+ M
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM--LGKNIT---- 356
Y+ G A R F ++ D+ L +W M+TG+ +A+ + ++M L + ++
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509
Query: 357 -----PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL 411
P+ +L +C+ + +GKEI ++ N+ S LVD+ + G L
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCL 568
Query: 412 DEAYATIDNMKLKPNEDVWTALLSACRLHRN 442
+ D + K N W ++ A +H N
Sbjct: 569 QMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 203/415 (48%), Gaps = 23/415 (5%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
W ++R S N +++ Y +M+ G K DN+ +P +LKA DL E+G ++H
Sbjct: 65 WIDLLRSKVRS---NLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 79 LVVVDGLESD-VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAG 137
V G D V V N+L+++Y K GD G VFD++ R+ SWN+++S +
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE 181
Query: 138 DAFVVFDHMRRSGLVGDGTTMLALLSACGDLM---DLKLGKAVHGYVVRNSGRLSNNEFV 194
A F M + T++++++AC +L L +GK VH Y +R G L N F+
Sbjct: 182 MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GEL--NSFI 238
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
N+++ MY ++ ++ L +D V+WN+++S + + LE +M + G
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKG-YGMNTAVGTSLISMYANCGSFLCAH 313
PDE T+ SVL ACS + L G +H+Y +K G N+ VG++L+ MY NC L
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM-LGKNITPDEGVFTAVLSACSHS 372
R F+ + D+ + W M+ G+ + +EA+ +F M + + V+ AC S
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 373 GLVDEGKEIF-----YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
G + I + RD V+ T L+D+ R GK+D A M+
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNT------LMDMYSRLGKIDIAMRIFGKME 467
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 204/432 (47%), Gaps = 59/432 (13%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM-LSFGQKADNFTYPFVLKAC- 64
+FD + + LWN+MI GY + +L+L+ M S G A++ T V+ AC
Sbjct: 360 VFDGMFDRKIGLWNAMIAGY---SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 65 --GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
G +E +HG VV GL+ D +V N+L+ MY + G + A +F KM RDL +
Sbjct: 417 RSGAFSRKEA---IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMR-----------RSGLVGDGTTMLALLSACGDLMDL 171
WNTM++GYV + DA ++ M+ R L + T++ +L +C L L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 172 KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLIS 231
GK +H Y ++N+ L+ + V ++++DMY C + +RK+F+ + K+ ++WN +I
Sbjct: 534 AKGKEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
Y G + ++L M + G P+EVT ISV ACS + G + Y++K YG+
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGV 650
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
+ S + +V G G+ +EA + N M+
Sbjct: 651 -----------------------------EPSSDHYACVVDLLGRAGRIKEAYQLMN-MM 680
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP-TTTHYSCLVDLLGRAGK 410
++ G ++++L A ++ G+ + + +EP +HY L ++ AG
Sbjct: 681 PRDFN-KAGAWSSLLGASRIHNNLEIGEIAAQNLIQ---LEPNVASHYVLLANIYSSAGL 736
Query: 411 LDEAYATIDNMK 422
D+A NMK
Sbjct: 737 WDKATEVRRNMK 748
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-----------KA 52
A IF ++ ++ WN+MI GY S +L+L +M + + K
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFS---EHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 53 DNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF 112
++ T +L +C L G +H + + L +DV VG++L+ MY K G + +R VF
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
D++P +++ +WN ++ Y +G +A + M G+ + T +++ +AC
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/634 (38%), Positives = 370/634 (58%), Gaps = 15/634 (2%)
Query: 7 IFDQIVFKNS-FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACG 65
+F++ V K F WNS+I A S S+ +L+ + M ++P +KAC
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSG---DSAEALLAFSSMRKLSLYPTRSSFPCAIKACS 87
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
L G + H V G +SD++V ++LI MY G + AR VFD++P R++ SW +
Sbjct: 88 SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 126 MMSGYVKNGEAGDAFVVFDHM------RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
M+ GY NG A DA +F + + D +++++SAC + L +++H
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDF--ISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
+V++ V N+++D Y ++ ARK+F+ + KD VS+NS++S Y + G
Sbjct: 208 FVIKRG--FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 238 GAFQVLELFGQMFIGGAVP-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
+ + E+F ++ V + +T+ +VL A S AL +G +H +++ G + VG
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
TS+I MY CG A +AF+ + +K++ SWT M+ G+G+HG +A+ +F M+ +
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
P+ F +VL+ACSH+GL EG F M + VEP HY C+VDLLGRAG L +AY
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 417 TIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKR 476
I MK+KP+ +W++LL+ACR+H+NV+LAEIS +LFE+D + Y+ LS+IYA R
Sbjct: 446 LIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGR 505
Query: 477 WXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
W PP +S ELN VH F GD H Q + IY L +LN +L +
Sbjct: 506 WKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLE 565
Query: 537 VGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTV 596
GY+ +TSSV +DV+ E KE L HSE+LA+AF ++NT PG+T+ + KNLRVC DCH V
Sbjct: 566 AGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNV 625
Query: 597 MKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+K++SK++ RE ++RD RFHHF+DG CSCG YW
Sbjct: 626 IKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 14/278 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTY--- 57
+ A+ +FD+I +N W SMIRGY GN+ ++ L++++L D+ +
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGY--DLNGNALD-AVSLFKDLLVDENDDDDAMFLDS 183
Query: 58 ---PFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMG--TARLVF 112
V+ AC + + + +H V+ G + V VGN+L+ Y K G+ G AR +F
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG-DGTTMLALLSACGDLMDL 171
D++ +D S+N++MS Y ++G + +AF VF + ++ +V + T+ +L A L
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 172 KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLIS 231
++GK +H V+R L ++ V S+IDMYC C + ARK F+ + K+ SW ++I+
Sbjct: 304 RIGKCIHDQVIRMG--LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
GY G A + LELF M G P+ +T +SVL ACS
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/629 (38%), Positives = 361/629 (57%), Gaps = 8/629 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSR-SLVLYREMLSFGQKADNFTYPFVL 61
+A+ +FD++ ++ WN+++ GY+ N +R +L + + M K T VL
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYS----QNGMARMALEMVKSMCEENLKPSFITIVSVL 243
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
A L L +G +HG + G +S V + +L+ MY K G + TAR +FD M R++
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWN+M+ YV+N +A ++F M G+ +++ L AC DL DL+ G+ +H
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V L N V NS+I MYC C + A +F L + VSWN++I G+ + G
Sbjct: 364 VELG--LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L F QM PD T +SV+ A + +S +H +++ N V T+L+
Sbjct: 422 ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD 481
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA CG+ + A F+ + ++ + +W M+ G+G HG G+ A+ +F EM I P+
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F +V+SACSHSGLV+ G + FY M +Y++E + HY +VDLLGRAG+L+EA+ I M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
+KP +V+ A+L AC++H+NV AE +A++LFE++P+ +V L+NIY A W
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVG 661
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
P S E+ VH FF+G T+H S IYA L+ L +K+ GY+P
Sbjct: 662 QVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVP 721
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
DT+ VL VE +VKE++L HSE+LA++F L+NT GTTI + KNLRVC DCH K +S
Sbjct: 722 DTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYIS 780
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
+ REI++RD+ RFHHF++G CSCG YW
Sbjct: 781 LVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 242/474 (51%), Gaps = 33/474 (6%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYR----EMLSFGQKADNFTYP 58
+A +F+ I K + L+++M++G+A + + + + V R E + + NFTY
Sbjct: 87 EAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVY-----NFTY- 140
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+LK CGD +G +HGL+V G D++ L +MY K + AR VFD+MP R
Sbjct: 141 -LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
DL SWNT+++GY +NG A A + M L T++++L A L + +GK +H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 179 GYVVRNS-GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
GY +R+ L N ++ +++DMY C + AR+LF+G+ ++ VSWNS+I Y +
Sbjct: 260 GYAMRSGFDSLVN---ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ + +F +M G P +V+V+ L AC+ + L G +H V+ G N +V
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
SLISMY C A F ++ ++L SW M+ GF +G+ +A++ F++M + + P
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTR---DYNVEPTTTHYSCLVDLLGRAGKLDEA 414
D + +V++A + + K I + R D NV TT LVD+ + G + A
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA----LVDMYAKCGAIMIA 492
Query: 415 YATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE------MDPNKVS 462
D M + + W A++ H K +A +LFE + PN V+
Sbjct: 493 RLIFDMMSER-HVTTWNAMIDGYGTHGFGK----AALELFEEMQKGTIKPNGVT 541
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 192/365 (52%), Gaps = 8/365 (2%)
Query: 52 ADNFTYP--FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTAR 109
A+ + +P +L+ C L +E+ ++ LV +GL + + L+S++ ++G + A
Sbjct: 33 ANVYEHPAALLLERCSSL--KELR-QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 89
Query: 110 LVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLM 169
VF+ + + ++TM+ G+ K + A F MR + LL CGD
Sbjct: 90 RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA 149
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSL 229
+L++GK +HG +V++ S + F + +MY C ++ ARK+F+ + +D VSWN++
Sbjct: 150 ELRVGKEIHGLLVKSG--FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 230 ISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY 289
++GY + G A LE+ M P +T++SVL A S + + +G +H Y ++ G+
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNE 349
+ T+L+ MYA CGS A + F+ + ++++ SW M+ + + +EA+ IF +
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 350 MLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAG 409
ML + + P + L AC+ G ++ G+ I +K++ + ++ + + L+ + +
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFI-HKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 410 KLDEA 414
++D A
Sbjct: 387 EVDTA 391
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/666 (36%), Positives = 365/666 (54%), Gaps = 74/666 (11%)
Query: 36 SRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSL 95
++S+ ++ M S G D+ P + K C +L ++G ++H + V GL+ D +V S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 96 ISMYLKFGDMGTARLVFDKMPVRD-----------------------------------L 120
MY++ G MG AR VFD+M +D +
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN ++SG+ ++G +A V+F + G D T+ ++L + GD L +G+ +HGY
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 181 VVRNSGRLSNNEFVTNSMIDMY-----------------------CNCDFISG------- 210
V++ L ++ V ++MIDMY CN +I+G
Sbjct: 278 VIKQG--LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA-YITGLSRNGLV 334
Query: 211 --ARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
A ++FE + + VSW S+I+G + G + LELF +M + G P+ VT+ S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L AC I+AL G S H + V+ N VG++LI MYA CG + FN +P K+L
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
W ++ GF +HGK +E +SIF ++ + PD FT++LSAC GL DEG + F
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
M+ +Y ++P HYSC+V+LLGRAGKL EAY I M +P+ VW ALL++CRL NV
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 445 LAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELN 504
LAEI+A+KLF ++P YV LSNIYAA+ W P S+ ++
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 505 KMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSE 564
V+ AGD SH Q D I K+ +++++++K G+ P+ L+DVE + +E+MLW HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 565 RLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGIC 624
+LA+ F L+NT GT +++ KNLR+C DCH V+K +S REI +RD RFHHF+DGIC
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 625 SCGGYW 630
SCG +W
Sbjct: 755 SCGDFW 760
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 179/440 (40%), Gaps = 74/440 (16%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
+ H ++ G ++D Y+ LI+ Y + A LV +P + S+++++ K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ VF M GL+ D + L C +L K+GK +H V L + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFV 153
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDT------------------------------- 223
SM MY C + ARK+F+ ++ KD
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 224 ----VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
VSWN ++SG+ + G + + +F ++ G PD+VTV SVL + L +G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE--------------------I 319
+H Y++K+G + V +++I MY G FN+ +
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 320 PDKSL---------------ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTA 364
DK+L SWT ++ G +GK EA+ +F EM + P+ +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+L AC + + G+ R + ++ S L+D+ + G+++ + + M K
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG-SALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 425 PNEDVWTALLSACRLHRNVK 444
N W +L++ +H K
Sbjct: 453 -NLVCWNSLMNGFSMHGKAK 471
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 5 QLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC 64
+L +Q + N W S+I G C+ G +L L+REM G K ++ T P +L AC
Sbjct: 342 ELFKEQTMELNVVSWTSIIAG--CAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 65 GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWN 124
G++ G HG V L +V+VG++LI MY K G + +++VF+ MP ++L WN
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 125 TMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL 168
++M+G+ +G+A + +F+ + R+ L D + +LLSACG +
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/634 (38%), Positives = 349/634 (55%), Gaps = 47/634 (7%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD+I +N + N MIR Y + ++ M + D++T+P VLKA
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYV---NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C +G ++HG GL S ++VGN L+SMY K G + ARLV D+M RD+ SW
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N+++ GY +N DA V M + D TM +LL A
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------------------- 250
Query: 184 NSGRLSNNEFVTNSMID--MYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V+N+ + MY + +F + K VSWN +I Y K +
Sbjct: 251 ----------VSNTTTENVMY--------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+EL+ +M G PD V++ SVL AC SAL LG +H Y+ +K N + +LI
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA CG A F + + + SWT M++ +G G+G +A+++F+++ + PD
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F L+ACSH+GL++EG+ F MT Y + P H +C+VDLLGRAGK+ EAY I +M
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
++PNE VW ALL ACR+H + + ++A KLF++ P + YV LSNIYA RW
Sbjct: 473 SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 532
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
P S E+N+++H F GD SH QSD+IY +L L +++K++GY+P
Sbjct: 533 NIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVP 592
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGP-----GTTIRITKNLRVCVDCHTV 596
D+ S L+DVE E KE L HSE+LA+ FAL+NT TIRITKNLR+C DCH
Sbjct: 593 DSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVA 652
Query: 597 MKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
K++S++ SREII+RD RFH FR G+CSCG YW
Sbjct: 653 AKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 181/425 (42%), Gaps = 75/425 (17%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+L+ D++ ++ WNS++ GYA + + +L + REM S D T +
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD---ALEVCREMESVKISHDAGTMASL 247
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L A V N+ + DM F KM + L
Sbjct: 248 LPA---------------------------VSNTTTENVMYVKDM------FFKMGKKSL 274
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN M+ Y+KN +A ++ M G D ++ ++L ACGD L LGK +HGY
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+ R +L N + N++IDMY C + AR +FE + +D VSW ++IS Y G
Sbjct: 335 IERK--KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ LF ++ G VPD + ++ L ACS H+ L+++G
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACS-----------HAGLLEEG------------ 429
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
+C + H L MV G GK +EA +M ++ P+E
Sbjct: 430 ---RSCFKLMTDHYKIT----PRLEHLACMVDLLGRAGKVKEAYRFIQDM---SMEPNER 479
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKLDEAYATID 419
V+ A+L AC D G + + + P + +Y L ++ +AG+ +E +
Sbjct: 480 VWGALLGACRVHSDTDIG---LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 536
Query: 420 NMKLK 424
MK K
Sbjct: 537 IMKSK 541
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 168/363 (46%), Gaps = 41/363 (11%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
VH ++++ L + +G L+ Y D+ +AR VFD++P R++ N M+ YV NG
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
G+ VF M + D T +L AC + +G+ +HG + LS+ FV
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG--LSSTLFVG 178
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
N ++ MY C F+S AR + + ++ +D VSWNSL+ GY + LE+ +M
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
D T+ S+L A S NT T+ MY
Sbjct: 239 HDAGTMASLLPAVS----------------------NT---TTENVMYVK--------DM 265
Query: 316 FNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLV 375
F ++ KSL SW VM+ + + EA+ +++ M PD T+VL AC + +
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTAL 433
GK+I + R + P + L+D+ + G L++A +NMK + DV WTA+
Sbjct: 326 SLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMK---SRDVVSWTAM 381
Query: 434 LSA 436
+SA
Sbjct: 382 ISA 384
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 126/273 (46%), Gaps = 12/273 (4%)
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSL 229
D++ + VH ++ R N + ++ Y + ++ ARK+F+ + ++ + N +
Sbjct: 54 DIRTLRTVHSRIILEDLRC--NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVM 111
Query: 230 ISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY 289
I Y G + +++FG M PD T VL ACS +++G +H K G
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNE 349
VG L+SMY CG A +E+ + + SW +V G+ + + +A+ + E
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 350 MLGKNITPDEGVFTAVLSACSHSGL--VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
M I+ D G ++L A S++ V K++F+KM + + ++ ++ + +
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK-----SLVSWNVMIGVYMK 286
Query: 408 AGKLDEA---YATIDNMKLKPNEDVWTALLSAC 437
EA Y+ ++ +P+ T++L AC
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 279 SVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHG 338
+VHS ++ + N+++G L+ YA+ A + F+EIP++++ VM+ + +G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 339 KGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY 398
E + +F M G N+ PD F VL ACS SG + G++I T+ + T
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFVG 178
Query: 399 SCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTAL-------------LSACRLHRNV 443
+ LV + G+ G L EA +D M + DV W +L L CR +V
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRR---DVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 444 KLA 446
K++
Sbjct: 236 KIS 238
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/628 (36%), Positives = 356/628 (56%), Gaps = 6/628 (0%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A ++F++I K+S +N++I GY + S+ L+ +M G + +FT+ VLKA
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYE---KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L +G ++H L V G D VGN ++ Y K + R++FD+MP D S+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N ++S Y + + + F M+ G +LS +L L++G+ +H +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ + V NS++DMY C+ A +F+ L + TVSW +LISGY + G L
Sbjct: 380 ATA--DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+LF +M D+ T +VL A + ++LLLG +H+++++ G N G+ L+ MY
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CGS A + F E+PD++ SW +++ +G G AI F +M+ + PD
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
VL+ACSH G V++G E F M+ Y + P HY+C++DLLGR G+ EA +D M
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDP-NKVSGYVCLSNIYAAEKRWXXXXX 482
+P+E +W+++L+ACR+H+N LAE +A+KLF M+ + YV +SNIYAA W
Sbjct: 618 EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
P+YS+ E+N +H F + D +H D+I K+ +L ++++ GY PD
Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPD 737
Query: 543 TSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
TSSV+ DV+ ++K + L HSERLA+AFALI+T G I + KNLR C DCH +K++SK
Sbjct: 738 TSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISK 797
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
++ REI +RD RFHHF +G+CSCG YW
Sbjct: 798 IVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 215/469 (45%), Gaps = 44/469 (9%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLV----------------------- 40
A+ ++D++ KN+ N+MI G+ G SS+R L
Sbjct: 67 ARKVYDEMPHKNTVSTNTMISGHV-KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSH 125
Query: 41 ------LYREML--SFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVY-- 90
L+R+M S D+ T+ +L C D + + +VH V G +++ +
Sbjct: 126 FDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLT 185
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
V N L+ Y + + A ++F+++P +D ++NT+++GY K+G ++ +F MR+SG
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
T +L A L D LG+ +H V S + V N ++D Y D +
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG--FSRDASVGNQILDFYSKHDRVLE 303
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
R LF+ + D VS+N +IS Y + L F +M G ++L +
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
+S+L +G +H + VG SL+ MYA C F A F +P ++ SWT +
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTAL 423
Query: 331 VTGF---GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
++G+ G+HG G + +F +M G N+ D+ F VL A + + GK++ + R
Sbjct: 424 ISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
N+E + S LVD+ + G + +A + M + N W AL+SA
Sbjct: 481 SGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 171/397 (43%), Gaps = 41/397 (10%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
RV ++ G ++D N ++ L+ G + AR V+D+MP ++ S NTM+SG+VK G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 135 EAG-------------------------------DAFVVFDHMRRSG--LVGDGTTMLAL 161
+ +AF +F M RS + D T L
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 162 LSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT--NSMIDMYCNCDFISGARKLFEGLA 219
L C D + VH + V+ N F+T N ++ YC + A LFE +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLG--FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
KD+V++N+LI+GYEK G + + LF +M G P + T VL A + LG
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
+H+ V G+ + +VG ++ Y+ L F+E+P+ S+ V+++ + +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 340 GREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY- 398
++ F EM F +LS ++ + G+++ + + H
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LATADSILHVG 389
Query: 399 SCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ LVD+ + +EA ++ + WTAL+S
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALIS 425
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+LIF + + + W ++I GY + L L+ +M +AD T+ VLK
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGA---GLKLFTKMRGSNLRADQSTFATVLK 460
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
A +G ++H ++ G +V+ G+ L+ MY K G + A VF++MP R+ S
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACG 166
WN ++S + NG+ A F M SGL D ++L +L+AC
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 362/631 (57%), Gaps = 10/631 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A L+F Q+ K+ WNS++ + S +L L M+S G+ + T+ L
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFV---NDGRSLDALGLLCSMISSGKSVNYVTFTSALA 370
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC E G +HGLVVV GL + +GN+L+SMY K G+M +R V +MP RD+ +
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 430
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC---GDLMDLKLGKAVHG 179
WN ++ GY ++ + A F MR G+ + T++++LSAC GDL L+ GK +H
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHA 488
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
Y+V S ++E V NS+I MY C +S ++ LF GL ++ ++WN++++ G
Sbjct: 489 YIV--SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 546
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+VL+L +M G D+ + L A ++++ L G +H VK G+ ++ + +
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
MY+ CG + ++SL SW ++++ G HG E + F+EML I P
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F ++L+ACSH GLVD+G + + RD+ +EP H C++DLLGR+G+L EA I
Sbjct: 667 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 726
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
M +KPN+ VW +LL++C++H N+ +A+ L +++P S YV SN++A RW
Sbjct: 727 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 786
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
+ S+ +L V F GD +H Q+ +IYAKL+D+ + +K+ GY
Sbjct: 787 VENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 846
Query: 540 MPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKM 599
+ DTS L D + E KE LW+HSERLALA+AL++T G+T+RI KNLR+C DCH+V K
Sbjct: 847 VADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKF 906
Query: 600 VSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
VS+++ R I++RD RFHHF G+CSC YW
Sbjct: 907 VSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 215/435 (49%), Gaps = 14/435 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + +N WN+M+ G + +R+M G K +F ++ A
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVG---LYLEGMEFFRKMCDLGIKPSSFVIASLVTA 67
Query: 64 CGDL--LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
CG + RE G++VHG V GL SDVYV +++ +Y +G + +R VF++MP R++
Sbjct: 68 CGRSGSMFRE-GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 126
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SW ++M GY GE + ++ MR G+ + +M ++S+CG L D LG+ + G V
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 186
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V++ L + V NS+I M + + A +F+ ++ +DT+SWNS+ + Y + G +
Sbjct: 187 VKSG--LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+F M + TV ++L + G +H +VK G+ V +L+
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA G + A+ F ++P K L SW ++ F G+ +A+ + M+ + +
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
FT+ L+AC ++G+ I + + + + LV + G+ G++ E+ + M
Sbjct: 365 FTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 422 KLKPNEDV--WTALL 434
P DV W AL+
Sbjct: 424 ---PRRDVVAWNALI 435
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 204/435 (46%), Gaps = 8/435 (1%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F+++ +N W S++ GY+ + +Y+ M G + + V+ +CG
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYS---DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 172
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L +G ++ G VV GLES + V NSLISM G++ A +FD+M RD SWN++
Sbjct: 173 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ Y +NG ++F +F MRR + TT+ LLS G + K G+ +HG VV+
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG- 291
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
+ V N+++ MY A +F+ + KD +SWNSL++ + G + L L
Sbjct: 292 -FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
M G + VT S L AC G +H +V G N +G +L+SMY
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 410
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
G + R ++P + + +W ++ G+ +A++ F M + ++ + +VL
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 367 SACSHSG-LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
SAC G L++ GK + + E + L+ + + G L + + + +
Sbjct: 471 SACLLPGDLLERGKPL-HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR- 528
Query: 426 NEDVWTALLSACRLH 440
N W A+L+A H
Sbjct: 529 NIITWNAMLAANAHH 543
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 21/372 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +++ + Q+ ++ WN++I GY A ++L ++ M G ++ T V
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGY---AEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 61 LKAC---GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
L AC GDLL E G +H +V G ESD +V NSLI+MY K GD+ +++ +F+ +
Sbjct: 470 LSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 527
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
R++ +WN M++ +G + + MR G+ D + LSA L L+ G+ +
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
HG V+ ++ F+ N+ DMY C I K+ + SWN LIS + G
Sbjct: 588 HGLAVKLG--FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 645
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG- 296
+V F +M G P VT +S+L ACS + G + + ++ + +G+ A+
Sbjct: 646 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYD-MIARDFGLEPAIEH 704
Query: 297 -TSLISMYANCGSFLCAHRAFNEIPDK-SLASWTVMVTGFGIHG---KGREAISIFNEML 351
+I + G A +++P K + W ++ IHG +GR+A E L
Sbjct: 705 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA----ENL 760
Query: 352 GKNITPDEGVFT 363
K D+ V+
Sbjct: 761 SKLEPEDDSVYV 772
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 169/342 (49%), Gaps = 9/342 (2%)
Query: 98 MYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT 157
MY KFG + AR +FD MPVR+ SWNTMMSG V+ G + F M G+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 158 MLALLSACGDLMDL-KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
+ +L++ACG + + G VHG+V + SG LS + +V+ +++ +Y +S +RK+FE
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAK-SGLLS-DVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 217 GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
+ ++ VSW SL+ GY G +V++++ M G +E ++ V+ +C + L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
G + +VK G AV SLISM + G+ A+ F+++ ++ SW + +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
+G E+ IF+ M + + + +LS H G+ I + + +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI-HGLVVKMGFDSVVC 297
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSA 436
+ L+ + AG+ EA M P +D+ W +L+++
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQM---PTKDLISWNSLMAS 336
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/689 (35%), Positives = 371/689 (53%), Gaps = 71/689 (10%)
Query: 8 FDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDL 67
FDQ+ ++S W +MI GY + + R + +M+ G + FT VL +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM---GDMVKEGIEPTQFTLTNVLASVAAT 159
Query: 68 LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMM 127
E G +VH +V GL +V V NSL++MY K GD A+ VFD+M VRD++SWN M+
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 128 SGYVKNGEAGDAFVVFDHM--------------------------------RRSGLVGDG 155
+ +++ G+ A F+ M R S L D
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
T+ ++LSAC +L L +GK +H ++V +S V N++I MY C + AR+L
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG--IVLNALISMYSRCGGVETARRLI 337
Query: 216 E---------------------------------GLAVKDTVSWNSLISGYEKCGGAFQV 242
E L +D V+W ++I GYE+ G +
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ LF M GG P+ T+ ++L S +++L G +H VK G + +V +LI+M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 303 YANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
YA G+ A RAF+ I ++ SWT M+ HG EA+ +F ML + + PD
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ V SAC+H+GLV++G++ F M + PT +HY+C+VDL GRAG L EA I+ M
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
++P+ W +LLSACR+H+N+ L +++A++L ++P Y L+N+Y+A +W
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
+S+ E+ VH F D +H + ++IY +K + +++KK+GY+P
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
DT+SVL+D+E EVKE++L HSE+LA+AF LI+T TT+RI KNLRVC DCHT +K +S
Sbjct: 698 DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFIS 757
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
KL+ REII+RD RFHHF+DG CSC YW
Sbjct: 758 KLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 192/428 (44%), Gaps = 72/428 (16%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
N+++S Y K GDM + FD++P RD SW TM+ GY G+ A V M + G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC------- 205
T+ +L++ ++ GK VH ++V+ L N V+NS+++MY C
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLG--LRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 206 ---------DFISG---------------ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
D S A FE +A +D V+WNS+ISG+ + G +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 242 VLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
L++F +M + PD T+ SVL AC+ + L +G +HS++V G+ ++ V +LI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 301 SMYANCGSFLCAHR---------------------------------AFNEIPDKSLASW 327
SMY+ CG A R F + D+ + +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
T M+ G+ HG EAI++F M+G P+ A+LS S + GK+I +
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
+ + + L+ + +AG + A D ++ + + WT+++ A H + +
Sbjct: 442 SGEIYSVSVS-NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE--- 497
Query: 448 ISAQKLFE 455
A +LFE
Sbjct: 498 -EALELFE 504
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 198/458 (43%), Gaps = 77/458 (16%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPF 59
M A F+Q+ ++ WNSMI G+ R+L ++ +ML D FT
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRG---YDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISM--------------------- 98
VL AC +L +G ++H +V G + V N+LISM
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 99 ------------YLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM 146
Y+K GDM A+ +F + RD+ +W M+ GY ++G G+A +F M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 147 RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD 206
G + T+ A+LS L L GK +HG V+ SG + + V+N++I MY
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK-SGEIYSVS-VSNALITMYAKAG 462
Query: 207 FISGARKLFEGLAV-KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
I+ A + F+ + +DTVSW S+I + G A + LELF M + G PD +T + V
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA 325
AC+ H+ LV + G M + IP +L+
Sbjct: 523 SACT-----------HAGLVNQ--------GRQYFDMMKDVDKI---------IP--TLS 552
Query: 326 SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
+ MV FG G +EA +M I PD + ++LSAC +D GK
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLGK---VAA 606
Query: 386 TRDYNVEPTTT-HYSCLVDLLGRAGKLDEAYATIDNMK 422
R +EP + YS L +L GK +EA +MK
Sbjct: 607 ERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 37/297 (12%)
Query: 172 KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLIS 231
K G A+H + + L F N+++ Y + + F+ L +D+VSW ++I
Sbjct: 61 KTGYALHARKLFDEMPL-RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIV 119
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
GY+ G + + + G M G P + T+ +VL + + + G VHS++VK G
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFN-------------------------------EIP 320
N +V SL++MYA CG + A F+ ++
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 321 DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN-ITPDEGVFTAVLSACSHSGLVDEGK 379
++ + +W M++GF G A+ IF++ML + ++PD +VLSAC++ + GK
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 380 EIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE-DVWTALL 434
+I + +T +++ + L+ + R G ++ A I+ K + + +TALL
Sbjct: 300 QIHSHIVTTGFDISGIV--LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/675 (36%), Positives = 356/675 (52%), Gaps = 47/675 (6%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +FD++ + WNS+I YA G + R FG + DN T V
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYA--KLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L C L +G ++H V + +++VGN L+ MY K G M A VF M V+D+
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDV 295
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRR-------------------------------- 148
SWN M++GY + G DA +F+ M+
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 149 ---SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN-----EFVTNSMID 200
SG+ + T++++LS C + L GK +H Y ++ L N V N +ID
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 201 MYCNCDFISGARKLFEGLAVK--DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV--P 256
MY C + AR +F+ L+ K D V+W +I GY + G A + LEL +MF P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVK-KGYGMNTAVGTSLISMYANCGSFLCAHRA 315
+ T+ L AC+ ++AL +G +H+Y ++ + + V LI MYA CGS A
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 316 FNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLV 375
F+ + K+ +WT ++TG+G+HG G EA+ IF+EM D VL ACSHSG++
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
D+G E F +M + V P HY+CLVDLLGRAG+L+ A I+ M ++P VW A LS
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 436 ACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXP 495
CR+H V+L E +A+K+ E+ N Y LSN+YA RW
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 496 PSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVK 555
P S+ E K FF GD +H + +IY L D +++K +GY+P+T L+DV+ E K
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEK 775
Query: 556 EKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICR 615
+ +L++HSE+LALA+ ++ T G IRITKNLRVC DCHT +S+++ +II+RD R
Sbjct: 776 DDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSR 835
Query: 616 FHHFRDGICSCGGYW 630
FHHF++G CSC GYW
Sbjct: 836 FHHFKNGSCSCKGYW 850
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 227/472 (48%), Gaps = 55/472 (11%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRV 76
+ WNS+IR Y + N + L L+ M S DN+T+PFV KACG++ G
Sbjct: 93 YHWNSLIRSYGDNGCAN---KCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
H L +V G S+V+VGN+L++MY + + AR VFD+M V D+ SWN+++ Y K G+
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 137 GDAFVVFDHMRRS-GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
A +F M G D T++ +L C L LGK +H + V + + N FV
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV--TSEMIQNMFVG 267
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG-------- 247
N ++DMY C + A +F ++VKD VSWN++++GY + G + LF
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 248 ---------------------------QMFIGGAVPDEVTVISVLGACSRISALLLGSSV 280
QM G P+EVT+ISVL C+ + AL+ G +
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 281 HSY-------LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS--LASWTVMV 331
H Y L K G+G V LI MYA C A F+ + K + +WTVM+
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFT--AVLSACSHSGLVDEGKEIF-YKMTRD 388
G+ HG +A+ + +EM ++ FT L AC+ + GK+I Y +
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
N P +CL+D+ + G + +A DNM K NE WT+L++ +H
Sbjct: 508 QNAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMH 557
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 54/456 (11%)
Query: 48 FGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGT 107
F A T PF+ K C + ++ +H ++ G+ + + + + LIS Y+ G +
Sbjct: 23 FSTSAPEITPPFIHK-CKTISQVKL---IHQKLLSFGILT-LNLTSHLISTYISVGCLSH 77
Query: 108 ARLVFDKMPVRD--LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
A + + P D + WN+++ Y NG A +F M D T + AC
Sbjct: 78 AVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKAC 137
Query: 166 GDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS 225
G++ ++ G++ H + +G +SN FV N+++ MY C +S ARK+F+ ++V D VS
Sbjct: 138 GEISSVRCGESAHALSLV-TGFISN-VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 226 WNSLISGYEKCGGAFQVLELFGQMFIG-GAVPDEVTVISVLGACSRISALLLGSSVHSYL 284
WNS+I Y K G LE+F +M G PD +T+++VL C+ + LG +H +
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 285 VKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV------------- 331
V N VG L+ MYA CG A+ F+ + K + SW MV
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 332 ----------------------TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
+G+ G G EA+ + +ML I P+E +VLS C
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHY-------SCLVDLLGRAGKLDEAYATIDNMK 422
+ G + GKEI + Y ++ + + L+D+ + K+D A A D++
Sbjct: 376 ASVGALMHGKEIHCYAIK-YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 423 LKPNEDV-WTALLSACRLHRNVKLAEISAQKLFEMD 457
K + V WT ++ H + A ++FE D
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDT--VSWNSLISGYEKCGGAFQVLELFGQMFI 251
+T+ +I Y + +S A L D WNSLI Y G A + L LFG M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
PD T V AC IS++ G S H+ + G+ N VG +L++MY+ C S
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACS 370
A + F+E+ + SW ++ + GK + A+ +F+ M + PD VL C+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV- 429
G GK++ ++ +CLVD+ + G +DEA NM +K DV
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK---DVV 296
Query: 430 -WTALLSAC----RLHRNVKLAEISAQKLFEMD----PNKVSGY 464
W A+++ R V+L E ++ +MD +SGY
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 338/592 (57%), Gaps = 8/592 (1%)
Query: 45 MLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGD 104
+LS TY ++ CG +RVH ++ +G + D ++ LI MY G
Sbjct: 68 VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 127
Query: 105 MGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
+ AR VFDK R + WN + G + ++ M R G+ D T +L A
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 165 C----GDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV 220
C + L GK +H ++ R S++ ++ +++DMY + A +F G+ V
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRG--YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 221 KDTVSWNSLISGYEKCGGAFQVLELFGQMF--IGGAVPDEVTVISVLGACSRISALLLGS 278
++ VSW+++I+ Y K G AF+ L F +M + P+ VT++SVL AC+ ++AL G
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 279 SVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHG 338
+H Y++++G V ++L++MY CG R F+ + D+ + SW +++ +G+HG
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 339 KGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY 398
G++AI IF EML +P F +VL ACSH GLV+EGK +F M RD+ ++P HY
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425
Query: 399 SCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDP 458
+C+VDLLGRA +LDEA + +M+ +P VW +LL +CR+H NV+LAE ++++LF ++P
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485
Query: 459 NKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQ 518
YV L++IYA + W P + E+ + ++ F + D +
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNP 545
Query: 519 QSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPG 578
+ I+A L L E +K+ GY+P T VLY++E E KE+++ HSE+LALAF LINT G
Sbjct: 546 LMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG 605
Query: 579 TTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
IRITKNLR+C DCH K +SK M +EI++RD+ RFH F++G+CSCG YW
Sbjct: 606 EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 200/417 (47%), Gaps = 48/417 (11%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD+ + ++WN++ R + G L LY +M G ++D FTY +VLKA
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEV---LGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 64 C--GDLLLREM--GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
C + + + G +H + G S VY+ +L+ MY +FG + A VF MPVR+
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL--VGDGTTMLALLSACGDLMDLKLGKAV 177
+ SW+ M++ Y KNG+A +A F M R + TM+++L AC L L+ GK +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
HGY++R L + V ++++ MY C + +++F+ + +D VSWNSLIS Y G
Sbjct: 308 HGYILRRG--LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ +++F +M GA P VT +SVLGACS H LV++G +
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACS-----------HEGLVEEGKRL------ 408
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+M+ + G + + MV G + EA + +M P
Sbjct: 409 -FETMWRDHGI------------KPQIEHYACMVDLLGRANRLDEAAKMVQDM---RTEP 452
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKLDE 413
V+ ++L +C G V+ + ++ + +EP +Y L D+ A DE
Sbjct: 453 GPKVWGSLLGSCRIHGNVELAERASRRL---FALEPKNAGNYVLLADIYAEAQMWDE 506
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 224 VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSY 283
+S N LI K G Q + + Q + P + T ++ C S+L VH +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 284 LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREA 343
++ G + + T LI MY++ GS A + F++ +++ W + + G G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 344 ISIFNEMLGKNITPDEGVFTAVLSACSHS----GLVDEGKEIFYKMTR---DYNVEPTTT 396
+ ++ +M + D +T VL AC S + +GKEI +TR +V TT
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
LVD+ R G +D A M ++ N W+A++ AC
Sbjct: 223 ----LVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-AC 257
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/630 (36%), Positives = 355/630 (56%), Gaps = 11/630 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + ++ WNS+I G A ++ L+ ++L G K D +T VLKA
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIA---QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 64 CGDL---LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L L + VH + + + SD +V +LI Y + M A ++F++ DL
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DL 482
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WN MM+GY ++ + +F M + G D T+ + CG L + GK VH Y
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++ L + +V++ ++DMY C +S A+ F+ + V D V+W ++ISG + G
Sbjct: 543 AIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ +F QM + G +PDE T+ ++ A S ++AL G +H+ +K + VGTSL+
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MYA CGS A+ F I ++ +W M+ G HG+G+E + +F +M I PD+
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
F VLSACSHSGLV E + M DY ++P HYSCL D LGRAG + +A I++
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXX 480
M ++ + ++ LL+ACR+ + + + A KL E++P S YV LSN+YAA +W
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 481 XXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYM 540
P +S+ E+ +H F D S++Q++ IY K+KD+ +K+ GY+
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Query: 541 PDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMV 600
P+T L DVE E KE+ L+ HSE+LA+AF L++T P T IR+ KNLRVC DCH MK +
Sbjct: 901 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYI 960
Query: 601 SKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+K+ +REI++RD RFH F+DGICSCG YW
Sbjct: 961 AKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 220/456 (48%), Gaps = 16/456 (3%)
Query: 10 QIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLL 69
+I+F+N L + G S L + +M+ + D T+ +L +
Sbjct: 279 EIIFRNKGLSEYLHSG--------QYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 70 REMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSG 129
+G +VH + + GL+ + V NSLI+MY K G AR VFD M RDL SWN++++G
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMD-LKLGKAVHGYVVRNSGRL 188
+NG +A +F + R GL D TM ++L A L + L L K VH + ++ +
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN-- 448
Query: 189 SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQ 248
++ FV+ ++ID Y + A LFE D V+WN++++GY + + L+LF
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Query: 249 MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
M G D+ T+ +V C + A+ G VH+Y +K GY ++ V + ++ MY CG
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 309 FLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
A AF+ IP +WT M++G +G+ A +F++M + PDE + A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNED 428
S +++G++I + N + LVD+ + G +D+AY +++ N
Sbjct: 628 SSCLTALEQGRQIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NIT 685
Query: 429 VWTALLSACRLHRNVK--LAEISAQKLFEMDPNKVS 462
W A+L H K L K + P+KV+
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVT 721
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 164/369 (44%), Gaps = 36/369 (9%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGG--NSSSRSLVLYREMLSFGQKADNFTYPFVL 61
A+ +FD++ ++ WNS++ YA S+ + ++ +L+R + T +L
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
K C HG GL+ D +V +L+++YLKFG + +++F++MP RD+
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
WN M+ Y++ G +A + SGL + T+ L GD D
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD----------- 261
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+G++ + F +G + +V + + N +S Y G
Sbjct: 262 ---AGQVKS----------------FANGN----DASSVSEIIFRNKGLSEYLHSGQYSA 298
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+L+ F M D+VT I +L ++ +L LG VH +K G + V SLI+
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY F A F+ + ++ L SW ++ G +G EA+ +F ++L + PD+
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 362 FTAVLSACS 370
T+VL A S
Sbjct: 419 MTSVLKAAS 427
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 194/439 (44%), Gaps = 43/439 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ + +++F+++ +++ LWN M++ Y L G K +
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAY-------------------LEMGFKEEAIDLSSA 236
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ G L E+ +R+ L + G +SD G + + D V ++
Sbjct: 237 FHSSG-LNPNEITLRL--LARISGDDSDA-------------GQVKSFANGNDASSVSEI 280
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
N +S Y+ +G+ F M S + D T + +L+ + L LG+ VH
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
++ L V+NS+I+MYC AR +F+ ++ +D +SWNS+I+G + G
Sbjct: 341 ALKLGLDLMLT--VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRI-SALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ + LF Q+ G PD+ T+ SVL A S + L L VH + +K ++ V T+L
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I Y+ A F E + L +W M+ G+ G + + +F M + D+
Sbjct: 459 IDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 360 GVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
V C +++GK++ Y + Y+++ + S ++D+ + G + A
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAF 575
Query: 419 DNMKLKPNEDVWTALLSAC 437
D++ + P++ WT ++S C
Sbjct: 576 DSIPV-PDDVAWTTMISGC 593
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
DL+L G H ++ + ++ N+LISMY K G + AR VFDKMP RDL SWN+
Sbjct: 54 DLML---GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 126 MMSGYVKNGEA-----GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+++ Y ++ E AF++F +R+ + T+ +L C + ++ HGY
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+ L +EFV +++++Y + + LFE + +D V WN ++ Y + G
Sbjct: 171 ACKIG--LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE 228
Query: 241 QVLELFGQMFIGGAVPDEVTV 261
+ ++L G P+E+T+
Sbjct: 229 EAIDLSSAFHSSGLNPNEITL 249
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M AQ FD I + W +MI G C G R+ ++ +M G D FT +
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISG--CIENGE-EERAFHVFSQMRLMGVLPDEFTIATL 624
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
KA L E G ++H + +D +VG SL+ MY K G + A +F ++ + ++
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 684
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
T+WN M+ G ++GE + +F M+ G+ D T + +LSAC
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSL 229
DL LGK H ++ + + F+ N++I MY C ++ AR++F+ + +D VSWNS+
Sbjct: 54 DLMLGKCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 230 ISGY--------EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
++ Y E AF + + Q + +T+ +L C + S H
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVV---YTSRMTLSPMLKLCLHSGYVWASESFH 168
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGR 341
Y K G + V +L+++Y G F E+P + + W +M+ + G
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE 228
Query: 342 EAISIFNEMLGKNITPDE 359
EAI + + + P+E
Sbjct: 229 EAIDLSSAFHSSGLNPNE 246
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
S L+LG H+ ++ + +LISMY+ CGS A R F+++PD+ L SW ++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 332 TGFGIHGKG-----REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
+ + ++A +F + + + +L C HSG V E F+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYA 171
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLHRNVK 444
++ LV++ + GK+ E + M P DV W +L A L K
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM---PYRDVVLWNLMLKA-YLEMGFK 227
Query: 445 LAEISAQKLFE---MDPNKVS 462
I F ++PN+++
Sbjct: 228 EEAIDLSSAFHSSGLNPNEIT 248
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/625 (36%), Positives = 345/625 (55%), Gaps = 5/625 (0%)
Query: 6 LIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACG 65
L+F F N FL+NS+I G+ + +L L+ + G FT+P VLKAC
Sbjct: 66 LLFSHTQFPNIFLYNSLINGFV---NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACT 122
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
R++GI +H LVV G DV SL+S+Y G + A +FD++P R + +W
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
+ SGY +G +A +F M G+ D ++ +LSAC + DL G+ + Y+
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM--EE 240
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
+ N FV +++++Y C + AR +F+ + KD V+W+++I GY + +EL
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F QM PD+ +++ L +C+ + AL LG S + + + N + +LI MYA
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
CG+ F E+ +K + ++G +G + + ++F + I+PD F +
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
L C H+GL+ +G F ++ Y ++ T HY C+VDL GRAG LD+AY I +M ++P
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXX 485
N VW ALLS CRL ++ +LAE ++L ++P YV LSNIY+ RW
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 540
Query: 486 XXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSS 545
P YS+ EL VH+F A D SH SD IYAKL+DL +++ +G++P T
Sbjct: 541 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 600
Query: 546 VLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMS 605
V +DVE E KE++L HSE+LA+A LI+T G IR+ KNLRVC DCH VMK++SK+
Sbjct: 601 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 660
Query: 606 REIIMRDICRFHHFRDGICSCGGYW 630
REI++RD RFH F +G CSC YW
Sbjct: 661 REIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 3/350 (0%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++H ++ L D ++ N L+ L F + L+F ++ +N++++G+V N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ +F +R+ GL G T +L AC KLG +H VV+ +++
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG--FNHDVAA 148
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
S++ +Y ++ A KLF+ + + V+W +L SGY G + ++LF +M G
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
PD ++ VL AC + L G + Y+ + N+ V T+L+++YA CG A
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
F+ + +K + +W+ M+ G+ + +E I +F +ML +N+ PD+ LS+C+ G
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 375 VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+D G E + + + L+D+ + G + + MK K
Sbjct: 329 LDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 181/398 (45%), Gaps = 38/398 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +FD+I ++ W ++ GY S ++ L+++M+ G K D++ V
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSG---RHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 61 LKAC---GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
L AC GDL + G + + ++ + +V +L+++Y K G M AR VFD M
Sbjct: 219 LSACVHVGDL---DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE 275
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
+D+ +W+TM+ GY N + +F M + L D +++ LS+C L L LG+
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW- 334
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
G + + N F+ N++IDMY C ++ ++F+ + KD V N+ ISG K G
Sbjct: 335 -GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG 393
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+FGQ G PD T + +L C VH+ L++ G A+
Sbjct: 394 HVKLSFAVFGQTEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAISC 442
Query: 298 ------------SLISMYANCGSFLCAHRAFNEIPDKSLA-SWTVMVTGFGIHGKGREAI 344
++ ++ G A+R ++P + A W +++G + + A
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 345 SIFNEMLGKNITP-DEGVFTAVLSACSHSGLVDEGKEI 381
++ E++ + P + G + + + S G DE E+
Sbjct: 503 TVLKELIA--LEPWNAGNYVQLSNIYSVGGRWDEAAEV 538
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 360/633 (56%), Gaps = 8/633 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ--KADNFTYP 58
+ AQ+IF KN WN+M+ G+ SA G++ VL R+ML+ G+ KAD T
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGF--SAEGDTHGTFDVL-RQMLAGGEDVKADEVTIL 399
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+ C +H + + V N+ ++ Y K G + A+ VF + +
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
+ SWN ++ G+ ++ + + M+ SGL+ D T+ +LLSAC L L+LGK VH
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
G+++RN L + FV S++ +Y +C + + LF+ + K VSWN++I+GY + G
Sbjct: 520 GFIIRN--WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ L +F QM + G ++++ V GACS + +L LG H+Y +K + + S
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 637
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
LI MYA GS + + FN + +KS ASW M+ G+GIHG +EAI +F EM PD
Sbjct: 638 LIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPD 697
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
+ F VL+AC+HSGL+ EG +M + ++P HY+C++D+LGRAG+LD+A +
Sbjct: 698 DLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV 757
Query: 419 -DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ M + + +W +LLS+CR+H+N+++ E A KLFE++P K YV LSN+YA +W
Sbjct: 758 AEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKW 817
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
S+ ELN+ V F G+ ++I + L ++ K+
Sbjct: 818 EDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKM 877
Query: 538 GYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVM 597
GY PDT SV +D+ E K + L HSE+LAL + LI T GTTIR+ KNLR+CVDCH
Sbjct: 878 GYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAA 937
Query: 598 KMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
K++SK+M REI++RD RFHHF++G+CSCG YW
Sbjct: 938 KLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 219/428 (51%), Gaps = 13/428 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQK-ADNFTYPFVLK 62
++ +FD + KN F WN++I Y+ + + + + EM+S D+FTYP V+K
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI---EMISTTDLLPDHFTYPCVIK 195
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC + +G+ VHGLVV GL DV+VGN+L+S Y G + A +FD MP R+L S
Sbjct: 196 ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 255
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRS----GLVGDGTTMLALLSACGDLMDLKLGKAVH 178
WN+M+ + NG + ++F++ M + D T++ +L C ++ LGK VH
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
G+ V+ RL + N+++DMY C I+ A+ +F+ K+ VSWN+++ G+ G
Sbjct: 316 GWAVKL--RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 239 AFQVLELFGQMFIGG--AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
++ QM GG DEVT+++ + C S L +H Y +K+ + N V
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
+ ++ YA CGS A R F+ I K++ SW ++ G R ++ +M +
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
PD ++LSACS + GKE+ + R++ +E Y ++ L G+L A
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 417 TIDNMKLK 424
D M+ K
Sbjct: 553 LFDAMEDK 560
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 22/365 (6%)
Query: 34 SSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVV-VDGLESDVYVG 92
SSS + +L RE L +L+A G EMG ++H LV L +D +
Sbjct: 75 SSSDAFLLVREALGL-----------LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 123
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGL 151
+I+MY G +R VFD + ++L WN ++S Y +N + F M + L
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
+ D T ++ AC + D+ +G AVHG VV+ L + FV N+++ Y F++ A
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG--LVEDVFVGNALVSFYGTHGFVTDA 241
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI----GGAVPDEVTVISVLGA 267
+LF+ + ++ VSWNS+I + G + + L G+M G +PD T+++VL
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C+R + LG VH + VK + +L+ MY+ CG A F +K++ SW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 328 TVMVTGFGIHGKGREAISIFNEML--GKNITPDEGVFTAVLSACSHSGLVDEGKEIF-YK 384
MV GF G + +ML G+++ DE + C H + KE+ Y
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 385 MTRDY 389
+ +++
Sbjct: 422 LKQEF 426
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/565 (39%), Positives = 334/565 (59%), Gaps = 13/565 (2%)
Query: 75 RVHGLVVVDGLE-SDVYVGNSLISMYLKFGD---MGTARLVFDKM--PVRDLTSWNTMMS 128
++H + G+ SD +G LI + M A VF K+ P+ ++ WNT++
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NVFIWNTLIR 93
Query: 129 GYVKNGEAGDAFVVFDHMRRSGLV-GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS-G 186
GY + G + AF ++ MR SGLV D T L+ A + D++LG+ +H V+R+ G
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L +V NS++ +Y NC ++ A K+F+ + KD V+WNS+I+G+ + G + L L+
Sbjct: 154 SLI---YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M G PD T++S+L AC++I AL LG VH Y++K G N L+ +YA C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG-KNITPDEGVFTAV 365
G A F+E+ DK+ SWT ++ G ++G G+EAI +F M + + P E F +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
L ACSH G+V EG E F +M +Y +EP H+ C+VDLL RAG++ +AY I +M ++P
Sbjct: 331 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 390
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXX 485
N +W LL AC +H + LAE + ++ +++PN YV LSN+YA+E+RW
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450
Query: 486 XXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSS 545
P +S E+ VH+F GD SH QSD IYAKLK++ +L+ GY+P S+
Sbjct: 451 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 510
Query: 546 VLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMS 605
V DVE E KE + HSE++A+AF LI+T + I + KNLRVC DCH +K+VSK+ +
Sbjct: 511 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 570
Query: 606 REIIMRDICRFHHFRDGICSCGGYW 630
REI++RD RFHHF++G CSC YW
Sbjct: 571 REIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 186/344 (54%), Gaps = 12/344 (3%)
Query: 1 MPQAQLIFDQIVFK-NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYP 58
M A +F +I N F+WN++IRGYA GNS S + LYREM G + D TYP
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYA--EIGNSIS-AFSLYREMRVSGLVEPDTHTYP 125
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
F++KA + +G +H +V+ G S +YV NSL+ +Y GD+ +A VFDKMP +
Sbjct: 126 FLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
DL +WN++++G+ +NG+ +A ++ M G+ DG T+++LLSAC + L LGK VH
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
Y+++ L+ N +N ++D+Y C + A+ LF+ + K++VSW SLI G G
Sbjct: 246 VYMIKVG--LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 303
Query: 239 AFQVLELFGQM-FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ +ELF M G +P E+T + +L ACS + G + ++ Y + +
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEH 362
Query: 298 --SLISMYANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHG 338
++ + A G A+ +P ++ W ++ +HG
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/631 (36%), Positives = 350/631 (55%), Gaps = 29/631 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ KN WN+++ Y ++ + +L++ ++ + N +K
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNS---KMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 64 CGDLLLRE----MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+ R+ M +R DV N++I+ Y + G + AR +FD+ PV+D
Sbjct: 233 KKIVEARQFFDSMNVR------------DVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ +W M+SGY++N +A +FD M V + A+L+ +++ K +
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEV----SWNAMLAGYVQGERMEMAKELFD 336
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+ N N+MI Y C IS A+ LF+ + +D VSW ++I+GY + G +
Sbjct: 337 VMP------CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
F+ L LF QM G + + S L C+ + AL LG +H LVK GY VG +L
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ MY CGS A+ F E+ K + SW M+ G+ HG G A+ F M + + PD+
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
AVLSACSH+GLVD+G++ FY MT+DY V P + HY+C+VDLLGRAG L++A+ +
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
NM +P+ +W LL A R+H N +LAE +A K+F M+P YV LSN+YA+ RW
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD 630
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
P YS+ E+ H F GD H + D+I+A L++L+ ++KK GY
Sbjct: 631 VGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
Query: 540 MPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKM 599
+ TS VL+DVE E KE+M+ HSERLA+A+ ++ G IR+ KNLRVC DCH +K
Sbjct: 691 VSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKY 750
Query: 600 VSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
++++ R II+RD RFHHF+DG CSCG YW
Sbjct: 751 MARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 169/339 (49%), Gaps = 17/339 (5%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +FD+ ++ F W +M+ GY +R + RE+ + + ++ +L
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYI-------QNRMVEEARELFDKMPERNEVSWNAMLA 320
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
EM + ++ +V N++I+ Y + G + A+ +FDKMP RD S
Sbjct: 321 GYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W M++GY ++G + +A +F M R G + ++ + LS C D++ L+LGK +HG +V
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ G FV N+++ MYC C I A LF+ +A KD VSWN++I+GY + G
Sbjct: 437 K--GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM--NTAVGTSLI 300
L F M G PD+ T+++VL ACS + L+ + Y + + YG+ N+ ++
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSH-TGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 301 SMYANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHG 338
+ G AH +P + A W ++ +HG
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 148/305 (48%), Gaps = 26/305 (8%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
E D+ N +I Y++ ++G AR +F+ MP RD+ SWNTM+SGY +NG DA VFD
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M V + ALLSA + + K+ +A + R + L + N ++ +
Sbjct: 183 MPEKNDV----SWNALLSAY--VQNSKMEEACMLFKSRENWALVS----WNCLLGGFVKK 232
Query: 206 DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
I AR+ F+ + V+D VSWN++I+GY + G + +LF DE V V
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----------DESPVQDVF 282
Query: 266 GACSRISALLLGSSVHS--YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS 323
+ +S + V L K N ++++ Y A F+ +P ++
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 324 LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFY 383
+++W M+TG+ GK EA ++F++M + D + A+++ S SG E +F
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 384 KMTRD 388
+M R+
Sbjct: 399 QMERE 403
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 149/368 (40%), Gaps = 84/368 (22%)
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D+ WN +S Y++ G +A VF M R V + +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV-----------------------SYN 99
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY---EK 235
G + SG L N EF ARKLF+ + +D VSWN +I GY
Sbjct: 100 GMI---SGYLRNGEFEL---------------ARKLFDEMPERDLVSWNVMIKGYVRNRN 141
Query: 236 CGGAFQVLELFGQ--------MFIG----GAVPDEVTVISVLGACSRIS--ALLLGSSVH 281
G A ++ E+ + M G G V D +V + + +S ALL +
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 201
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLC------AHRAFNEIPDKSLASWTVMVTGFG 335
S + + + +L+S G F+ A + F+ + + + SW ++TG+
Sbjct: 202 SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYA 261
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVF--TAVLSACSHSGLVDEGKEIFYKMTRDYNVEP 393
GK EA +F+E +P + VF TA++S + +V+E +E+F KM E
Sbjct: 262 QSGKIDEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-----ER 310
Query: 394 TTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEIS-AQK 452
++ ++ + +++ A D M + N W +++ + +IS A+
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGY-----AQCGKISEAKN 364
Query: 453 LFEMDPNK 460
LF+ P +
Sbjct: 365 LFDKMPKR 372
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 38/289 (13%)
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
N I Y + A ++F+ + +VS+N +ISGY + G +LF +M V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 256 PDEVTVISV-----LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
V + LG + ++ V S+ +++S YA G
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDVCSW-------------NTMLSGYAQNGCVD 174
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
A F+ +P+K+ SW +++ + + K EA +F + + +L
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS----WNCLLGGFV 230
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV- 429
+ E ++ F M NV + ++ ++ ++GK+DEA D P +DV
Sbjct: 231 KKKKIVEARQFFDSM----NVRDVVS-WNTIITGYAQSGKIDEARQLFDE---SPVQDVF 282
Query: 430 -WTALLSACRLHRNVKLAEISAQKLFEMDP--NKVSGYVCLSNIYAAEK 475
WTA++S +R V+ A++LF+ P N+VS L+ E+
Sbjct: 283 TWTAMVSGYIQNRMVE----EARELFDKMPERNEVSWNAMLAGYVQGER 327
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/628 (36%), Positives = 358/628 (57%), Gaps = 10/628 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A L+F Q+ K+ WNS++ + S +L L M+S G+ + T+ L
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFV---NDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC E G +HGLVVV GL + +GN+L+SMY K G+M +R V +MP RD+ +
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 413
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC---GDLMDLKLGKAVHG 179
WN ++ GY ++ + A F MR G+ + T++++LSAC GDL L+ GK +H
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHA 471
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
Y+V S ++E V NS+I MY C +S ++ LF GL ++ ++WN++++ G
Sbjct: 472 YIV--SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 529
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+VL+L +M G D+ + L A ++++ L G +H VK G+ ++ + +
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
MY+ CG + ++SL SW ++++ G HG E + F+EML I P
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F ++L+ACSH GLVD+G + + RD+ +EP H C++DLLGR+G+L EA I
Sbjct: 650 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 709
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
M +KPN+ VW +LL++C++H N+ +A+ L +++P S YV SN++A RW
Sbjct: 710 KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWED 769
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
+ S+ +L V F GD +H Q+ +IYAKL+D+ + +K+ GY
Sbjct: 770 VENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGY 829
Query: 540 MPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKM 599
+ DTS L D + E KE LW+HSERLALA+AL++T G+T+RI KNLR+C DCH+V K
Sbjct: 830 VADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKF 889
Query: 600 VSKLMSREIIMRDICRFHHFRDGICSCG 627
VS+++ R I++RD RFHHF G+ G
Sbjct: 890 VSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 228/468 (48%), Gaps = 39/468 (8%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A IFDQ+ +++ WNS+ YA + S R L R F + ++ T +L
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR---FHDEVNSTTVSTLLSV 253
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
G + ++ G +HGLVV G +S V V N+L+ MY G A LVF +MP +DL SW
Sbjct: 254 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 313
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N++M+ +V +G + DA + M SG + T + L+AC + G+ +HG VV
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 373
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ L N+ + N+++ MY +S +R++ + +D V+WN+LI GY + + L
Sbjct: 374 SG--LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALL-LGSSVHSYLVKKGYGMNTAVGTSLISM 302
F M + G + +TV+SVL AC LL G +H+Y+V G+ + V SLI+M
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 491
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG + FN + ++++ +W M+ HG G E + + ++M ++ D+ F
Sbjct: 492 YAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 551
Query: 363 TAVLSACSHSGLVDEGKE---------------IFYKMTRDY---------------NVE 392
+ LSA + +++EG++ IF Y +V
Sbjct: 552 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 611
Query: 393 PTTTHYSCLVDLLGRAGKLDEAYATID---NMKLKPNEDVWTALLSAC 437
+ ++ L+ LGR G +E AT M +KP + +LL+AC
Sbjct: 612 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 209/425 (49%), Gaps = 14/425 (3%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDL--LLRE 71
+N WN+M+ G + +R+M G K +F ++ ACG + RE
Sbjct: 4 RNEVSWNTMMSGIVRVG---LYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
G++VHG V GL SDVYV +++ +Y +G + +R VF++MP R++ SW ++M GY
Sbjct: 61 -GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
GE + ++ MR G+ + +M ++S+CG L D LG+ + G VV++ L +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG--LESK 177
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
V NS+I M + + A +F+ ++ +DT+SWNS+ + Y + G + +F M
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
+ TV ++L + G +H +VK G+ V +L+ MYA G +
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
A+ F ++P K L SW ++ F G+ +A+ + M+ + + FT+ L+AC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV-- 429
++G+ I + + + + LV + G+ G++ E+ + M P DV
Sbjct: 358 PDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM---PRRDVVA 413
Query: 430 WTALL 434
W AL+
Sbjct: 414 WNALI 418
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 204/435 (46%), Gaps = 8/435 (1%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F+++ +N W S++ GY+ + +Y+ M G + + V+ +CG
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKG---EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 155
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L +G ++ G VV GLES + V NSLISM G++ A +FD+M RD SWN++
Sbjct: 156 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 215
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ Y +NG ++F +F MRR + TT+ LLS G + K G+ +HG VV+
Sbjct: 216 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG- 274
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
+ V N+++ MY A +F+ + KD +SWNSL++ + G + L L
Sbjct: 275 -FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
M G + VT S L AC G +H +V G N +G +L+SMY
Sbjct: 334 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 393
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
G + R ++P + + +W ++ G+ +A++ F M + ++ + +VL
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
Query: 367 SACSHSG-LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
SAC G L++ GK + + E + L+ + + G L + + + +
Sbjct: 454 SACLLPGDLLERGKPL-HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR- 511
Query: 426 NEDVWTALLSACRLH 440
N W A+L+A H
Sbjct: 512 NIITWNAMLAANAHH 526
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 21/372 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +++ + Q+ ++ WN++I GY A ++L ++ M G ++ T V
Sbjct: 396 MSESRRVLLQMPRRDVVAWNALIGGY---AEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 61 LKAC---GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
L AC GDLL E G +H +V G ESD +V NSLI+MY K GD+ +++ +F+ +
Sbjct: 453 LSACLLPGDLL--ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 510
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
R++ +WN M++ +G + + MR G+ D + LSA L L+ G+ +
Sbjct: 511 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
HG V+ ++ F+ N+ DMY C I K+ + SWN LIS + G
Sbjct: 571 HGLAVKLG--FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG- 296
+V F +M G P VT +S+L ACS + G + + ++ + +G+ A+
Sbjct: 629 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYD-MIARDFGLEPAIEH 687
Query: 297 -TSLISMYANCGSFLCAHRAFNEIPDK-SLASWTVMVTGFGIHG---KGREAISIFNEML 351
+I + G A +++P K + W ++ IHG +GR+A E L
Sbjct: 688 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA----ENL 743
Query: 352 GKNITPDEGVFT 363
K D+ V+
Sbjct: 744 SKLEPEDDSVYV 755
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 158/325 (48%), Gaps = 9/325 (2%)
Query: 115 MPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDL-KL 173
MPVR+ SWNTMMSG V+ G + F M G+ + +L++ACG + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY 233
G VHG+V + SG LS + +V+ +++ +Y +S +RK+FE + ++ VSW SL+ GY
Sbjct: 61 GVQVHGFVAK-SGLLS-DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 234 EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNT 293
G +V++++ M G +E ++ V+ +C + LG + +VK G
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 294 AVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK 353
AV SLISM + G+ A+ F+++ ++ SW + + +G E+ IF+ M
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 354 NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDE 413
+ + + +LS H G+ I + + + + L+ + AG+ E
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 414 AYATIDNMKLKPNEDV--WTALLSA 436
A M P +D+ W +L+++
Sbjct: 298 ANLVFKQM---PTKDLISWNSLMAS 319
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/633 (36%), Positives = 351/633 (55%), Gaps = 32/633 (5%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC-- 64
+FD++ ++ WNSMI G C G+ ++ ++ L+ EM + ++ ++ C
Sbjct: 88 LFDEMPVRDVVSWNSMISG--CVECGDMNT-AVKLFDEM----PERSVVSWTAMVNGCFR 140
Query: 65 ------GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+ L +M ++ D NS++ YL+FG + A +F +MP +
Sbjct: 141 SGKVDQAERLFYQMPVK------------DTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
++ SW TM+ G +N +G+A +F +M R + +++AC + +G VH
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
G +++ E+V+ S+I Y NC I +RK+F+ + W +L+SGY
Sbjct: 249 GLIIKLG--FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
L +F M +P++ T S L +CS + L G +H VK G + VG S
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ MY++ G+ A F +I KS+ SW ++ G HG+G+ A IF +M+ N PD
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYN-VEPTTTHYSCLVDLLGRAGKLDEAYAT 417
E FT +LSACSH G +++G+++FY M+ N ++ HY+C+VD+LGR GKL EA
Sbjct: 427 EITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEEL 486
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
I+ M +KPNE VW ALLSACR+H +V E +A +F +D + YV LSNIYA+ RW
Sbjct: 487 IERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRW 546
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
P S+ + H+FF+GD H IY KL+ L E+LK++
Sbjct: 547 SNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKEL 604
Query: 538 GYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVM 597
GY PD S L+DVE E KE+MLW HSERLA+AF LINT G+ + + KNLRVC DCHTV+
Sbjct: 605 GYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVI 664
Query: 598 KMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
K++S ++ REI++RD RFHHF++G CSCG YW
Sbjct: 665 KLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 186/375 (49%), Gaps = 24/375 (6%)
Query: 95 LISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
+I+ Y + + A +FD+MPVRD+ SWN+M+SG V+ G+ A +FD M +V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV-- 129
Query: 155 GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRL-----SNNEFVTNSMIDMYCNCDFIS 209
+ A+++ C + GK V + RL + NSM+ Y +
Sbjct: 130 --SWTAMVNGC-----FRSGK------VDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVD 176
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A KLF+ + K+ +SW ++I G ++ + + L+LF M V+ AC+
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
A +G VH ++K G+ V SLI+ YANC + + F+E + +A WT
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDY 389
+++G+ ++ K +A+SIF+ ML +I P++ F + L++CS G +D GKE+ + +
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM-HGVAVKL 355
Query: 390 NVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEIS 449
+E + LV + +G +++A + + K + W +++ C H K A +
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 450 AQKLFEM--DPNKVS 462
++ + +P++++
Sbjct: 415 FGQMIRLNKEPDEIT 429
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
T +I+ Y + A F+E+P + + SW M++G G A+ +F+EM +++
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV 129
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
+TA+++ C SG VD+ + +FY+M T ++ +V + GK+D+A
Sbjct: 130 S----WTAMVNGCFRSGKVDQAERLFYQMP-----VKDTAAWNSMVHGYLQFGKVDDALK 180
Query: 417 TIDNMKLKPNEDV--WTALLSACRLHRNVKLAE 447
M P ++V WT ++ C L +N + E
Sbjct: 181 LFKQM---PGKNVISWTTMI--CGLDQNERSGE 208
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/630 (36%), Positives = 352/630 (55%), Gaps = 9/630 (1%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD + +N W++++ G+ + SL L+ EM G + FT+ LKACG
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNG---DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L E G+++HG + G E V VGNSL+ MY K G + A VF ++ R L SWN M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLV--GDGTTMLALLSACGDLMDLKLGKAVHGYVVRN 184
++G+V G A F M+ + + D T+ +LL AC + GK +HG++VR+
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 185 SGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLE 244
++ +T S++D+Y C ++ ARK F+ + K +SW+SLI GY + G + +
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
LF ++ + D + S++G + + L G + + VK G+ T+V S++ MY
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 305 NCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTA 364
CG A + F E+ K + SWTV++TG+G HG G++++ IF EML NI PDE + A
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
VLSACSHSG++ EG+E+F K+ + ++P HY+C+VDLLGRAG+L EA ID M +K
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 425 PNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXX 484
PN +W LLS CR+H +++L + + L +D + YV +SN+Y W
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAR 539
Query: 485 XXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK-KVGYMPDT 543
S+ E+ + VH F +G+ SH + I LK+ +L+ ++GY+
Sbjct: 540 ELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGL 599
Query: 544 SSVLYDVEAEVKEKMLWDHSERLALAFALINTG---PGTTIRITKNLRVCVDCHTVMKMV 600
L+D++ E KE+ L HSE+LA+ AL G G TIR+ KNLRVCVDCH +K +
Sbjct: 600 KHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGL 659
Query: 601 SKLMSREIIMRDICRFHHFRDGICSCGGYW 630
SK+ ++RD RFH F DG CSCG YW
Sbjct: 660 SKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 212/420 (50%), Gaps = 20/420 (4%)
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+L+ C L + G +VH ++ G ++ N LI MY K + A VFD MP R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ SW+ +MSG+V NG+ + +F M R G+ + T L ACG L L+ G +HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+ ++ + V NS++DMY C I+ A K+F + + +SWN++I+G+ G
Sbjct: 132 FCLKIGFEMMVE--VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 240 FQVLELFGQMFIGG--AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA--V 295
+ L+ FG M PDE T+ S+L ACS + G +H +LV+ G+ ++ +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
SL+ +Y CG A +AF++I +K++ SW+ ++ G+ G+ EA+ +F + N
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
D ++++ + L+ +GK++ + T+ + +VD+ + G +DEA
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQM-QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 416 ATIDNMKLKPNEDV--WTALLSACRLHRNVKLAEISAQKLFEM-----DPNKVSGYVCLS 468
M+LK DV WT +++ H L + S + +EM +P++V LS
Sbjct: 369 KCFAEMQLK---DVISWTVVITGYGKH---GLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 255 VPDE-VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
+P++ ++S+L C+R G VH YL+K G G+N LI MY C L A+
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
+ F+ +P++++ SW+ +++G ++G + ++S+F+EM + I P+E F+ L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
+++G +I + E + LVD+ + G+++EA
Sbjct: 122 ALEKGLQI-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 161
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 368/663 (55%), Gaps = 38/663 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPF 59
+ A+ +FD++ +N W SMI GYA + + ++ L+ M+ + N T
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYA---RRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
V+ AC L E G +V+ + G+E + + ++L+ MY+K + A+ +FD+ +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
L N M S YV+ G +A VF+ M SG+ D +ML+ +S+C L ++ GK+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
YV+RN +N + N++IDMY C A ++F+ ++ K V+WNS+++GY + G
Sbjct: 362 YVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 240 FQVLELFGQM----------FIGGAV----------------------PDEVTVISVLGA 267
E F M I G V D VT++S+ A
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C + AL L ++ Y+ K G ++ +GT+L+ M++ CG A FN + ++ +++W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
T + + G AI +F++M+ + + PD F L+ACSH GLV +GKEIFY M +
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
+ V P HY C+VDLLGRAG L+EA I++M ++PN+ +W +LL+ACR+ NV++A
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 448 ISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMV 507
+A+K+ + P + YV LSN+YA+ RW PP S ++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 508 HQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLA 567
H+F +GD SH + +I A L +++++ +G++PD S+VL DV+ + K ML HSE+LA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 568 LAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCG 627
+A+ LI++ GTTIRI KNLRVC DCH+ K SK+ +REII+RD RFH+ R G CSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 628 GYW 630
+W
Sbjct: 840 DFW 842
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 242/470 (51%), Gaps = 50/470 (10%)
Query: 3 QAQLIFDQIVFKNS------FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFT 56
+ L F + VF+NS F++NS+IRGYA S N +++L+ M++ G D +T
Sbjct: 80 RESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN---EAILLFLRMMNSGISPDKYT 136
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP 116
+PF L AC + GI++HGL+V G D++V NSL+ Y + G++ +AR VFD+M
Sbjct: 137 FPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS 196
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGK 175
R++ SW +M+ GY + A DA +F M R + + TM+ ++SAC L DL+ G+
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
V+ ++ RNSG + N+ + ++++DMY C+ I A++LF+ + N++ S Y +
Sbjct: 257 KVYAFI-RNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G + L +F M G PD ++++S + +CS++ +L G S H Y+++ G+ +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
+LI MY C A R F+ + +K++ +W +V G+ +G+ A F M KNI
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 356 T--------------------------PDEGV------FTAVLSACSHSGLVDEGKEIFY 383
EGV ++ SAC H G +D K I+Y
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 384 KMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WT 431
+ ++ ++ + LVD+ R G + A + +++ N DV WT
Sbjct: 495 YIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL---TNRDVSAWT 540
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 350/650 (53%), Gaps = 38/650 (5%)
Query: 16 SFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIR 75
S ++N +R + S+ ++ ++ Y+ + G + D F++ +LKA + G+
Sbjct: 76 SIVFNPFLRDLSRSSEPRAT---ILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+HG+ D +V + MY G + AR VFD+M RD+ +WNTM+ Y + G
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSN----- 190
+AF +F+ M+ S ++ D + ++SACG +++ +A++ +++ N R+
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 191 ------------------------NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
N FV+ +M+ Y C + A+ +F+ KD V W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
++IS Y + + L +F +M G PD V++ SV+ AC+ + L VHS +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
G ++ +LI+MYA CG F ++P +++ SW+ M+ +HG+ +A+S+
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
F M +N+ P+E F VL CSHSGLV+EGK+IF MT +YN+ P HY C+VDL G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 407 RAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVC 466
RA L EA I++M + N +W +L+SACR+H ++L + +A+++ E++P+ V
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 467 LSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAK 526
+SNIYA E+RW S + N H+F GD H+QS++IYAK
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 527 LKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGT------T 580
L ++ +LK GY+PD SVL DVE E K+ ++ HSE+LAL F L+N
Sbjct: 613 LDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 581 IRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
IRI KNLRVC DCH K+VSK+ REII+RD RFH +++G+CSC YW
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 177/422 (41%), Gaps = 74/422 (17%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ ++ WN+MI Y C G + L+ EM D ++ A
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERY-CRFG--LVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG ++ ++ + + D ++ +L++MY G M AR F KM VR+L
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRR-------------------------------SGLV 152
M+SGY K G DA V+FD + SG+
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
D +M +++SAC +L L K VH + N L + + N++I+MY C + R
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNG--LESELSINNALINMYAKCGGLDATR 399
Query: 213 KLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
+FE + ++ VSW+S+I+ G A L LF +M P+EVT + VL CS
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS--- 456
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVT 332
HS LV++G + F +N P L + MV
Sbjct: 457 --------HSGLVEEGKKI-----------------FASMTDEYNITP--KLEHYGCMVD 489
Query: 333 GFGIHGKGREAISIFNEM-LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
FG REA+ + M + N+ ++ +++SAC G ++ GK + R +
Sbjct: 490 LFGRANLLREALEVIESMPVASNVV----IWGSLMSACRIHGELELGK---FAAKRILEL 542
Query: 392 EP 393
EP
Sbjct: 543 EP 544
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 5/233 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ AQ+IFDQ K+ W +MI Y S + +L ++ EM G K D + V
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVES---DYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ AC +L + + VH + V+GLES++ + N+LI+MY K G + R VF+KMP R++
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW++M++ +GEA DA +F M++ + + T + +L C ++ GK +
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV-KDTVSWNSLISG 232
+ E M+D++ + + A ++ E + V + V W SL+S
Sbjct: 471 MTDEYNITPKLEHY-GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/628 (36%), Positives = 354/628 (56%), Gaps = 7/628 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ ++S +N+MI GY S R ++ E L K D T VL+A
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR---MFLENLD-QFKPDLLTVSSVLRA 316
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG L + ++ ++ G + V N LI +Y K GDM TAR VF+ M +D SW
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N+++SGY+++G+ +A +F M D T L L+S L DLK GK +H ++
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ + + V+N++IDMY C + + K+F + DTV+WN++IS + G L
Sbjct: 437 SG--ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
++ QM VPD T + L C+ ++A LG +H L++ GY +G +LI MY
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
+ CG + R F + + + +WT M+ +G++G+G +A+ F +M I PD VF
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
A++ ACSHSGLVDEG F KM Y ++P HY+C+VDLL R+ K+ +A I M +
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXX 483
KP+ +W ++L ACR +++ AE ++++ E++P+ + SN YAA ++W
Sbjct: 675 KPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLI 734
Query: 484 XXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDT 543
P YS+ E+ K VH F +GD S QS+ IY L+ L + K GY+PD
Sbjct: 735 RKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDP 794
Query: 544 SSVLYDV-EAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
V ++ E E K +++ HSERLA+AF L+NT PGT +++ KNLRVC DCH V K++SK
Sbjct: 795 REVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISK 854
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
++ REI++RD RFH F+DG CSC W
Sbjct: 855 IVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 231/427 (54%), Gaps = 14/427 (3%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
KN +LWNS+IR ++ +L Y ++ D +T+P V+KAC L EMG
Sbjct: 69 KNVYLWNSIIRAFS---KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
V+ ++ G ESD++VGN+L+ MY + G + AR VFD+MPVRDL SWN+++SGY +
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 134 GEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
G +A ++ ++ S +V D T+ ++L A G+L+ +K G+ +HG+ +++ +++
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG--VNSVVV 243
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
V N ++ MY + AR++F+ + V+D+VS+N++I GY K +++E +MF+
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK----LEMVEESVRMFLEN 299
Query: 254 A---VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
PD +TV SVL AC + L L +++Y++K G+ + + V LI +YA CG +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
A FN + K SW +++G+ G EA+ +F M+ D + ++S +
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVW 430
+ GK + + + + + L+D+ + G++ ++ +M + W
Sbjct: 420 RLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTW 477
Query: 431 TALLSAC 437
++SAC
Sbjct: 478 NTVISAC 484
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 221/440 (50%), Gaps = 16/440 (3%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+ +FD++ ++ WNS+I GY+ +L +Y E+ + D+FT V
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHG---YYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L A G+LL+ + G +HG + G+ S V V N L++MYLKF AR VFD+M VRD
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 121 TSWNTMMSGYVKNGEAGDAFVVF----DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
S+NTM+ GY+K ++ +F D + D T+ ++L ACG L DL L K
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLDQFK-----PDLLTVSSVLRACGHLRDLSLAKY 328
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
++ Y+++ L + V N +ID+Y C + AR +F + KDTVSWNS+ISGY +
Sbjct: 329 IYNYMLKAGFVLEST--VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
G + ++LF M I D +T + ++ +R++ L G +HS +K G ++ +V
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
+LI MYA CG + + F+ + +W +++ G + + +M +
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
PD F L C+ GKEI + R + E + L+++ + G L+ +
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 417 TIDNMKLKPNEDVWTALLSA 436
+ M + + WT ++ A
Sbjct: 566 VFERMS-RRDVVTWTGMIYA 584
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 191/384 (49%), Gaps = 12/384 (3%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM-PVRDLTSWNTMMSGYVKN 133
R+H LV+ GL+S + LI Y F + ++ VF ++ P +++ WN+++ + KN
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 134 GEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
G +A + +R S + D T +++ AC L D ++G V+ ++ ++ F
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG--FESDLF 142
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
V N+++DMY ++ AR++F+ + V+D VSWNSLISGY G + LE++ ++
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
VPD TV SVL A + + G +H + +K G V L++MY A
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
R F+E+ + S+ M+ G+ E++ +F E L + PD ++VL AC H
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLR 321
Query: 374 LVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
+ K I+ Y + + +E T + L+D+ + G + A ++M+ K W +
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECKDTVS-WNS 378
Query: 433 LLSACRLHRNVKLAEISAQKLFEM 456
++S ++ + A KLF+M
Sbjct: 379 IISGYIQSGDL----MEAMKLFKM 398
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/571 (38%), Positives = 330/571 (57%), Gaps = 3/571 (0%)
Query: 52 ADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLV 111
AD Y +LK C L G VH ++ D+ +GN+L++MY K G + AR V
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 112 FDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDL 171
F+KMP RD +W T++SGY ++ DA + F+ M R G + T+ +++ A
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 172 KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLIS 231
G +HG+ V+ +N V ++++D+Y + A+ +F+ L ++ VSWN+LI+
Sbjct: 178 CCGHQLHGFCVKCG--FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
G+ + G + LELF M G P + S+ GACS L G VH+Y++K G +
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
G +L+ MYA GS A + F+ + + + SW ++T + HG G+EA+ F EM
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL 411
I P+E F +VL+ACSHSGL+DEG + M +D + P HY +VDLLGRAG L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDL 414
Query: 412 DEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIY 471
+ A I+ M ++P +W ALL+ACR+H+N +L +A+ +FE+DP+ +V L NIY
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 472 AAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLN 531
A+ RW P+ S+ E+ +H F A D H Q ++I K +++
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 532 EQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCV 591
++K++GY+PDTS V+ V+ + +E L HSE++ALAFAL+NT PG+TI I KN+RVC
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 594
Query: 592 DCHTVMKMVSKLMSREIIMRDICRFHHFRDG 622
DCHT +K+ SK++ REII+RD RFHHF+D
Sbjct: 595 DCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 173/338 (51%), Gaps = 6/338 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+ +F+++ ++ W ++I GY+ + +L+ + +ML FG + FT V
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYS---QHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+KA G ++HG V G +S+V+VG++L+ +Y ++G M A+LVFD + R+
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN +++G+ + A +F M R G + +L AC L+ GK VH Y
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
++++ +L F N+++DMY I ARK+F+ LA +D VSWNSL++ Y + G
Sbjct: 288 MIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGK 345
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ + F +M G P+E++ +SVL ACS L G + + K G +++
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVV 405
Query: 301 SMYANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIH 337
+ G A R E+P + + A W ++ +H
Sbjct: 406 DLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/589 (38%), Positives = 328/589 (55%), Gaps = 4/589 (0%)
Query: 44 EMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFG 103
EM G + Y +L AC D G RVH ++ Y+ L+ Y K
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 104 DMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLS 163
+ AR V D+MP +++ SW M+S Y + G + +A VF M RS + T +L+
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 164 ACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDT 223
+C L LGK +HG +V+ + ++ FV +S++DMY I AR++FE L +D
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWN--YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 224 VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSY 283
VS ++I+GY + G + LE+F ++ G P+ VT S+L A S ++ L G H +
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 284 LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREA 343
++++ + SLI MY+ CG+ A R F+ +P+++ SW M+ G+ HG GRE
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 344 ISIFNEMLG-KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR-DYNVEPTTTHYSCL 401
+ +F M K + PD AVLS CSH + D G IF M +Y +P T HY C+
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 402 VDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKV 461
VD+LGRAG++DEA+ I M KP V +LL ACR+H +V + E ++L E++P
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENA 459
Query: 462 SGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSD 521
YV LSN+YA+ RW P S+ + + +H F A D +H + +
Sbjct: 460 GNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRRE 519
Query: 522 DIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTI 581
++ AK+K+++ ++K+ GY+PD S VLYDV+ E KEKML HSE+LAL F LI TG G I
Sbjct: 520 EVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPI 579
Query: 582 RITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
R+ KNLR+CVDCH K+ SK+ RE+ +RD RFH DGICSCG YW
Sbjct: 580 RVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 202/424 (47%), Gaps = 46/424 (10%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ + D++ KN W +MI Y+ + SS +L ++ EM+ K + FT+ V
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTG---HSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L +C +G ++HGL+V +S ++VG+SL+ MY K G + AR +F+ +P RD+
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
S +++GY + G +A +F + G+ + T +LL+A L L GK H +
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
V+R L + NS+IDMY C +S AR+LF+ + + +SWN+++ GY K G
Sbjct: 280 VLRRE--LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 241 QVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+VLELF M V PD VT+++VL CS G ++ +V YG T GT
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG--TKPGTE- 394
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ +V G G+ EA M K P
Sbjct: 395 --------------------------HYGCIVDMLGRAGRIDEAFEFIKRMPSK---PTA 425
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKLDEAYATI 418
GV ++L AC VD G+ + ++ +EP +Y L +L AG+ +A +
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLI---EIEPENAGNYVILSNLYASAGR----WADV 478
Query: 419 DNMK 422
+N++
Sbjct: 479 NNVR 482
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 367/662 (55%), Gaps = 38/662 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPF 59
+ A+ +FD++ +N W SMI GYA + + ++ L+ M+ + N T
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYA---RRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
V+ AC L E G +V+ + G+E + + ++L+ MY+K + A+ +FD+ +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
L N M S YV+ G +A VF+ M SG+ D +ML+ +S+C L ++ GK+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
YV+RN +N + N++IDMY C A ++F+ ++ K V+WNS+++GY + G
Sbjct: 362 YVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 240 FQVLELFGQM----------FIGGAV----------------------PDEVTVISVLGA 267
E F M I G V D VT++S+ A
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C + AL L ++ Y+ K G ++ +GT+L+ M++ CG A FN + ++ +++W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
T + + G AI +F++M+ + + PD F L+ACSH GLV +GKEIFY M +
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
+ V P HY C+VDLLGRAG L+EA I++M ++PN+ +W +LL+ACR+ NV++A
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 448 ISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMV 507
+A+K+ + P + YV LSN+YA+ RW PP S ++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 508 HQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLA 567
H+F +GD SH + +I A L +++++ +G++PD S+VL DV+ + K ML HSE+LA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 568 LAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCG 627
+A+ LI++ GTTIRI KNLRVC DCH+ K SK+ +REII+RD RFH+ R G CSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 628 GY 629
+
Sbjct: 840 DF 841
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 242/470 (51%), Gaps = 50/470 (10%)
Query: 3 QAQLIFDQIVFKNS------FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFT 56
+ L F + VF+NS F++NS+IRGYA S N +++L+ M++ G D +T
Sbjct: 80 RESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCN---EAILLFLRMMNSGISPDKYT 136
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP 116
+PF L AC + GI++HGL+V G D++V NSL+ Y + G++ +AR VFD+M
Sbjct: 137 FPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS 196
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGK 175
R++ SW +M+ GY + A DA +F M R + + TM+ ++SAC L DL+ G+
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
V+ ++ RNSG + N+ + ++++DMY C+ I A++LF+ + N++ S Y +
Sbjct: 257 KVYAFI-RNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G + L +F M G PD ++++S + +CS++ +L G S H Y+++ G+ +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
+LI MY C A R F+ + +K++ +W +V G+ +G+ A F M KNI
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 356 T--------------------------PDEGV------FTAVLSACSHSGLVDEGKEIFY 383
EGV ++ SAC H G +D K I+Y
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 384 KMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WT 431
+ ++ ++ + LVD+ R G + A + +++ N DV WT
Sbjct: 495 YIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT---NRDVSAWT 540
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/623 (35%), Positives = 335/623 (53%), Gaps = 5/623 (0%)
Query: 8 FDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDL 67
F + +N LWN M+ Y +S R ++R+M + +TYP +LK C L
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFR---IFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 68 LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMM 127
E+G ++H ++ + + YV + LI MY K G + TA + + +D+ SW TM+
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
+GY + A F M G+ D + +SAC L LK G+ +H SG
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV-SGF 622
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG 247
S+ F N+++ +Y C I + FE D ++WN+L+SG+++ G + L +F
Sbjct: 623 SSDLPF-QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+M G + T S + A S + + G VH+ + K GY T V +LISMYA CG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
S A + F E+ K+ SW ++ + HG G EA+ F++M+ N+ P+ VLS
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE 427
ACSH GLVD+G F M +Y + P HY C+VD+L RAG L A I M +KP+
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXX 487
VW LLSAC +H+N+++ E +A L E++P + YV LSN+YA K+W
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 921
Query: 488 XXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVL 547
P S+ E+ +H F+ GD +H +D+I+ +DL ++ ++GY+ D S+L
Sbjct: 922 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 981
Query: 548 YDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSRE 607
+++ E K+ +++ HSE+LA++F L++ I + KNLRVC DCH +K VSK+ +RE
Sbjct: 982 NELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNRE 1041
Query: 608 IIMRDICRFHHFRDGICSCGGYW 630
II+RD RFHHF G CSC YW
Sbjct: 1042 IIVRDAYRFHHFEGGACSCKDYW 1064
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 209/432 (48%), Gaps = 7/432 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + K+ W +MI G + + ++ L+ +M G + + VL A
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLS---KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + E+G ++HGLV+ G SD YV N+L+S+Y G++ +A +F M RD ++
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
NT+++G + G A +F M GL D T+ +L+ AC L G+ +H Y +
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
G SNN+ + +++++Y C I A F V++ V WN ++ Y
Sbjct: 418 -LGFASNNK-IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+F QM I VP++ T S+L C R+ L LG +HS ++K + +N V + LI MY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A G A K + SWT M+ G+ + +A++ F +ML + I DE T
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
+SAC+ + EG++I + + LV L R GK++E+Y + +
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 424 KPNEDVWTALLS 435
N W AL+S
Sbjct: 655 GDN-IAWNALVS 665
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 218/415 (52%), Gaps = 17/415 (4%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLV-----LYREMLSFGQKADNFTYPFVL 61
+FD++ + F WN MI+ A SR+L+ L+ M+S + T+ VL
Sbjct: 142 VFDEMPERTIFTWNKMIKELA--------SRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 62 KAC-GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+AC G + ++ ++H ++ GL V N LI +Y + G + AR VFD + ++D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+SW M+SG KN +A +F M G++ ++LSAC + L++G+ +HG
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
V++ S++ +V N+++ +Y + + A +F ++ +D V++N+LI+G +CG
Sbjct: 314 VLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ +ELF +M + G PD T+ S++ ACS L G +H+Y K G+ N + +L+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
++YA C A F E +++ W VM+ +G+ R + IF +M + I P++
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
+ ++L C G ++ G++I ++ + N + S L+D+ + GKLD A+
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAW 545
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 218/464 (46%), Gaps = 46/464 (9%)
Query: 49 GQKADNFTYPFVLKAC----GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGD 104
G + ++ T ++L+ C G L + G ++H ++ GL+S+ + L YL GD
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSL---DEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD 135
Query: 105 MGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
+ A VFD+MP R + +WN M+ G+ F +F M + + T +L A
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 165 C-GDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDT 223
C G + + + +H ++ L ++ V N +ID+Y F+ AR++F+GL +KD
Sbjct: 196 CRGGSVAFDVVEQIHARILYQG--LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 224 VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSY 283
SW ++ISG K + + LF M++ G +P SVL AC +I +L +G +H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 284 LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREA 343
++K G+ +T V +L+S+Y + G+ + A F+ + + ++ ++ G G G +A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 344 ISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR---------------- 387
+ +F M + PD +++ ACS G + G+++ T+
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 388 -----------DYNVEPTTTHYSCLVDLLGRAGKLDE---AYATIDNMKLK---PNEDVW 430
DY +E + +L G LD+ ++ M+++ PN+ +
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 431 TALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVC--LSNIYA 472
++L C +++L E ++ + + +++ YVC L ++YA
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYA 536
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 7/234 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLV-LYREMLSFGQKADNFTYPF 59
+ ++ L F+Q ++ WN+++ G+ S + R V + RE G +NFT+
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE----GIDNNNFTFGS 697
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+KA + + G +VH ++ G +S+ V N+LISMY K G + A F ++ ++
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SWN +++ Y K+G +A FD M S + + T++ +LSAC + + G A
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISG 232
+ G E ++DM +S A++ + + +K D + W +L+S
Sbjct: 818 SMNSEYGLSPKPEHYV-CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/624 (36%), Positives = 347/624 (55%), Gaps = 12/624 (1%)
Query: 17 FLWNSMIRGYACSAGGNSSSRS-----LVLY-REMLSFGQKADNFTYPFVLKACGDLLLR 70
F N +IR N+SS S L Y +E +S G+ ++ F+ ++ L R
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 71 EMGI----RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ HG ++ LE DV + N LI+ Y K G + AR VFD M R L SWNTM
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ Y +N +A +F MR G T+ ++LSACG D K +H V+
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L N +V +++D+Y C I A ++FE + K +V+W+S+++GY + + L L+
Sbjct: 194 DL--NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLY 251
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+ ++ T+ SV+ ACS ++AL+ G +H+ + K G+G N V +S + MYA C
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
GS ++ F+E+ +K+L W +++GF H + +E + +F +M + P+E F+++L
Sbjct: 312 GSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 371
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
S C H+GLV+EG+ F M Y + P HYSC+VD+LGRAG L EAY I ++ P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPT 431
Query: 427 EDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXX 486
+W +LL++CR+++N++LAE++A+KLFE++P +V LSNIYAA K+W
Sbjct: 432 ASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL 491
Query: 487 XXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSV 546
S+ ++ VH F G++ H + +I + L +L + +K GY P
Sbjct: 492 LRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHE 551
Query: 547 LYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSR 606
L+DVE KE++L HSE+LAL F L+ + +RI KNLR+CVDCH MK S R
Sbjct: 552 LHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRR 611
Query: 607 EIIMRDICRFHHFRDGICSCGGYW 630
II+RD+ RFHHF DG CSCG +W
Sbjct: 612 FIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 162/327 (49%), Gaps = 9/327 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD ++ ++ WN+MI Y S +L ++ EM + G K FT VL A
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLY---TRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG ++H L V ++ ++YVG +L+ +Y K G + A VF+ M + +W
Sbjct: 172 CGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
++M++GYV+N +A +++ +R L + T+ +++ AC +L L GK +H + +
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ +N FV +S +DMY C + + +F + K+ WN++ISG+ K +V+
Sbjct: 292 SG--FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVM 349
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM--NTAVGTSLIS 301
LF +M G P+EVT S+L C + G L++ YG+ N + ++
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVD 408
Query: 302 MYANCGSFLCAHRAFNEIP-DKSLASW 327
+ G A+ IP D + + W
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIW 435
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 120/233 (51%), Gaps = 5/233 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +F+ + K+S W+SM+ GY + +L+LYR + + FT V
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGY---VQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ AC +L G ++H ++ G S+V+V +S + MY K G + + ++F ++ ++L
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
WNT++SG+ K+ + ++F+ M++ G+ + T +LLS CG ++ G+
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK- 388
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSLISG 232
++R + LS N + M+D+ +S A +L + + T S W SL++
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/654 (35%), Positives = 348/654 (53%), Gaps = 36/654 (5%)
Query: 8 FDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREML-SFGQKADNFTYPFVLKACGD 66
F+++ ++ WN +I GY+ S ++ ++ Y M+ F T +LK
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA---YNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF----DKMPV----- 117
+G ++HG V+ G ES + VG+ L+ MY G + A+ VF D+ V
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 118 ---------------------RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGT 156
+D SW M+ G +NG A +A F M+ GL D
Sbjct: 212 MGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 157 TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
++L ACG L + GK +H ++R + ++ +V +++IDMYC C + A+ +F+
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTN--FQDHIYVGSALIDMYCKCKCLHYAKTVFD 329
Query: 217 GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
+ K+ VSW +++ GY + G A + +++F M G PD T+ + AC+ +S+L
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
GS H + G V SL+++Y CG + R FNE+ + SWT MV+ +
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
G+ E I +F++M+ + PD T V+SACS +GLV++G+ F MT +Y + P+
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM 456
HYSC++DL R+G+L+EA I+ M P+ WT LLSACR N+++ + +A+ L E+
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Query: 457 DPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTS 516
DP+ +GY LS+IYA++ +W P S+ + +H F A D S
Sbjct: 570 DPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDES 629
Query: 517 HQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTG 576
D IYAKL++LN ++ GY PDTS V +DVE VK KML HSERLA+AF LI
Sbjct: 630 SPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVP 689
Query: 577 PGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
G IR+ KNLRVCVDCH K +S + REI++RD RFH F+DG CSCG +W
Sbjct: 690 SGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 186/384 (48%), Gaps = 39/384 (10%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
+ +++ N+L+ Y K G + F+K+P RD +WN ++ GY +G G A ++
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 146 MRR--SGLVGDGT--TMLALLSACGDLMDLKLGKAVHGYVVR------------------ 183
M R S + T TML L S+ G + LGK +HG V++
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNG---HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 184 NSGRLSN-----------NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
N G +S+ N + NS++ C I A +LF G+ KD+VSW ++I G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKG 244
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
+ G A + +E F +M + G D+ SVL AC + A+ G +H+ +++ + +
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
VG++LI MY C A F+ + K++ SWT MV G+G G+ EA+ IF +M
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
I PD +SAC++ ++EG + K + T S LV L G+ G +D
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNS-LVTLYGKCGDID 423
Query: 413 EAYATIDNMKLKPNEDVWTALLSA 436
++ + M ++ + WTA++SA
Sbjct: 424 DSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ KN W +M+ GY + + ++ ++ +M G D++T + A
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTG---RAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C ++ E G + HG + GL V V NSL+++Y K GD+ + +F++M VRD SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
M+S Y + G A + +FD M + GL DG T+ ++SAC ++ G+ +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV-KDTVSWNSLISG 232
G + + + MID++ + A + G+ D + W +L+S
Sbjct: 501 EYGIVPSIGHYS-CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 129/322 (40%), Gaps = 66/322 (20%)
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYE 234
K +HG ++R F+ N+++ Y + AR++F+ + + SWN+L+ Y
Sbjct: 26 KMIHGNIIR--ALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 235 KCGGAFQVLELFGQM-------------------FIGGAVP-------------DEVTVI 262
K G ++ F ++ +G AV VT++
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 263 SVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD- 321
++L S + LG +H ++K G+ VG+ L+ MYAN G A + F + D
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 322 -----------------------------KSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
K SW M+ G +G +EAI F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
+ + D+ F +VL AC G ++EGK+I + R N + S L+D+ + L
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLH 322
Query: 413 EAYATIDNMKLKPNEDVWTALL 434
A D MK K N WTA++
Sbjct: 323 YAKTVFDRMKQK-NVVSWTAMV 343
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/628 (35%), Positives = 349/628 (55%), Gaps = 6/628 (0%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F+ I+ K+ +W ++ +C SL L M G +N+T+ LKA
Sbjct: 200 ARTVFEGILCKDIVVWAGIV---SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L + VHG ++ D VG L+ +Y + GDM A VF++MP D+ W
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
+ M++ + +NG +A +F MR + +V + T+ ++L+ C LG+ +HG VV+
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
L + +V+N++ID+Y C+ + A KLF L+ K+ VSWN++I GYE G +
Sbjct: 377 VGFDL--DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAF 434
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+F + EVT S LGAC+ ++++ LG VH +K AV SLI MY
Sbjct: 435 SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMY 494
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CG A FNE+ +ASW +++G+ HG GR+A+ I + M ++ P+ F
Sbjct: 495 AKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFL 554
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
VLS CS++GL+D+G+E F M RD+ +EP HY+C+V LLGR+G+LD+A I+ +
Sbjct: 555 GVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXX 483
+P+ +W A+LSA N + A SA+++ +++P + YV +SN+YA K+W
Sbjct: 615 EPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASI 674
Query: 484 XXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDT 543
P S+ E VH F G + H I L+ LN + + GY+PD
Sbjct: 675 RKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDR 734
Query: 544 SSVLYDVEAEVKEKMLWDHSERLALAFALINTGPG-TTIRITKNLRVCVDCHTVMKMVSK 602
++VL D++ E K+K LW HSERLALA+ L+ I I KNLR+C DCH+ MK++S
Sbjct: 735 NAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISS 794
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
++ R++++RD+ RFHHF G+CSCG +W
Sbjct: 795 IVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 210/434 (48%), Gaps = 11/434 (2%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD++ +N+ + ++ +GYAC SR L+RE G + + + LK
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQDPIGLYSR---LHRE----GHELNPHVFTSFLKLFVS 158
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L E+ +H +V G +S+ +VG +LI+ Y G + +AR VF+ + +D+ W +
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+S YV+NG D+ + MR +G + + T L A L K VHG +++
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L + V ++ +Y +S A K+F + D V W+ +I+ + + G + ++LF
Sbjct: 279 VL--DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M VP+E T+ S+L C+ LG +H +VK G+ ++ V +LI +YA C
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
A + F E+ K+ SW ++ G+ G+G +A S+F E L ++ E F++ L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
AC+ +D G ++ + N + S L+D+ + G + A + + M+ +
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEME-TID 514
Query: 427 EDVWTALLSACRLH 440
W AL+S H
Sbjct: 515 VASWNALISGYSTH 528
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 166/362 (45%), Gaps = 14/362 (3%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+H ++ G D++ N L++ Y+K G A +FD+MP R+ S+ T+ GY
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA---- 126
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
D ++ + R G + + L L ++ +H +V+ +N FV
Sbjct: 127 CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLG--YDSNAFVG 184
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
++I+ Y C + AR +FEG+ KD V W ++S Y + G L+L M + G +
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
P+ T + L A + A VH ++K Y ++ VG L+ +Y G A +
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 316 FNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS---HS 372
FNE+P + W+ M+ F +G EA+ +F M + P+E +++L+ C+ S
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
GL ++ + K+ D ++ + L+D+ + K+D A + K NE W
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNA----LIDVYAKCEKMDTAVKLFAELSSK-NEVSWNT 419
Query: 433 LL 434
++
Sbjct: 420 VI 421
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A +F ++ KN WN++I GY G ++ ++RE L T+
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEG---GKAFSMFREALRNQVSVTEVTFSSA 455
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC L ++G++VHGL + V V NSLI MY K GD+ A+ VF++M D+
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN ++SGY +G A + D M+ +G T L +LS C + + G+
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSLISG 232
++R+ G E T M+ + + A KL EG+ + +V W +++S
Sbjct: 576 MIRDHGIEPCLEHYT-CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/595 (38%), Positives = 320/595 (53%), Gaps = 45/595 (7%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGT-------ARLVFDKMPVRDLTSWNTMM 127
++H ++ GL D Y I+ +L F T A++VFD D WN M+
Sbjct: 32 QIHARMLKTGLMQDSYA----ITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
G+ + E + +++ M S + T +LL AC +L + +H + +
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG-- 145
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG---------- 237
N+ + NS+I+ Y A LF+ + D VSWNS+I GY K G
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 238 ---------------GAFQV------LELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
G Q L+LF +M PD V++ + L AC+++ AL
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
G +HSYL K M++ +G LI MYA CG A F I KS+ +WT +++G+
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
HG GREAIS F EM I P+ FTAVL+ACS++GLV+EGK IFY M RDYN++PT
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM 456
HY C+VDLLGRAG LDEA I M LKPN +W ALL ACR+H+N++L E + L +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 457 DPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTS 516
DP YV +NI+A +K+W P S L H+F AGD S
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 505
Query: 517 HQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYD-VEAEVKEKMLWDHSERLALAFALINT 575
H + + I +K + + +L++ GY+P+ +L D V+ + +E ++ HSE+LA+ + LI T
Sbjct: 506 HPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKT 565
Query: 576 GPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
PGT IRI KNLRVC DCH V K++SK+ R+I+MRD RFHHFRDG CSCG YW
Sbjct: 566 KPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 178/371 (47%), Gaps = 40/371 (10%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+P AQ++FD ++FLWN MIRG++CS + RSL+LY+ ML + +T+P +
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCS---DEPERSLLLYQRMLCSSAPHNAYTFPSL 121
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LKAC +L E ++H + G E+DVY NSLI+ Y G+ A L+FD++P D
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 121 TSWNTMMSGYVKNGEA-------------------------------GDAFVVFDHMRRS 149
SWN+++ GYVK G+ +A +F M+ S
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 150 GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
+ D ++ LSAC L L+ GK +H Y+ N R+ + + +IDMY C +
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYL--NKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A ++F+ + K +W +LISGY G + + F +M G P+ +T +VL ACS
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 359
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGT--SLISMYANCGSFLCAHRAFNEIPDKSLAS- 326
+ G + Y +++ Y + + ++ + G A R E+P K A
Sbjct: 360 YTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Query: 327 WTVMVTGFGIH 337
W ++ IH
Sbjct: 419 WGALLKACRIH 429
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/631 (35%), Positives = 353/631 (55%), Gaps = 12/631 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+++FD+ K+ WNSMI GYA A G + Y L++ + +++ ++ V+K
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYA--ANGLDLEALGMFYSMRLNYVRLSES-SFASVIK 303
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP-VRDLT 121
C +L ++H VV G D + +L+ Y K M A +F ++ V ++
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SW M+SG+++N +A +F M+R G+ + T +L+A + + VH V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQV 419
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V+ + S+ V +++D Y + A K+F G+ KD V+W+++++GY + G
Sbjct: 420 VKTNYERSST--VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALL-LGSSVHSYLVKKGYGMNTAVGTSLI 300
+++FG++ GG P+E T S+L C+ +A + G H + +K + V ++L+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
+MYA G+ A F +K L SW M++G+ HG+ +A+ +F EM + + D
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
F V +AC+H+GLV+EG++ F M RD + PT H SC+VDL RAG+L++A I+N
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXX 480
M +W +L+ACR+H+ +L ++A+K+ M P + YV LSN+YA W
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQER 717
Query: 481 XXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYM 540
P YS+ E+ + F AGD SH D IY KL+DL+ +LK +GY
Sbjct: 718 AKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYE 777
Query: 541 PDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMV 600
PDTS VL D++ E KE +L HSERLA+AF LI T G+ + I KNLRVC DCH V+K++
Sbjct: 778 PDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLI 837
Query: 601 SKLMSREIIMRDICRFHHF-RDGICSCGGYW 630
+K+ REI++RD RFHHF DG+CSCG +W
Sbjct: 838 AKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 230/436 (52%), Gaps = 13/436 (2%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD++ +N W ++I GYA ++ + L L+ M + G + ++FT+ L +
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEV---LTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ G++VH +VV +GL+ + V NSLI++YLK G++ AR++FDK V+ + +WN+M
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+SGY NG +A +F MR + + ++ +++ C +L +L+ + +H VV+
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA-VKDTVSWNSLISGYEKCGGAFQVLEL 245
N + +++ Y C + A +LF+ + V + VSW ++ISG+ + G + ++L
Sbjct: 327 LFDQN--IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F +M G P+E T +L A IS S VH+ +VK Y ++ VGT+L+ Y
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
G A + F+ I DK + +W+ M+ G+ G+ AI +F E+ I P+E F+++
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 366 LSACSHSGL-VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
L+ C+ + + +GK+ F+ ++ + S L+ + + G ++ A + K
Sbjct: 501 LNVCAATNASMGQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 425 PNEDVWTALLSACRLH 440
+ W +++S H
Sbjct: 560 -DLVSWNSMISGYAQH 574
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 213/436 (48%), Gaps = 18/436 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FD+ ++ + S++ G++ + R L+ + G + D + VLK
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKR---LFLNIHRLGMEMDCSIFSSVLKV 102
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L G ++H + G DV VG SL+ Y+K + R VFD+M R++ +W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
T++SGY +N + +F M+ G + T A L + G VH VV+
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N L V+NS+I++Y C + AR LF+ VK V+WNS+ISGY G + L
Sbjct: 223 NG--LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+F M + E + SV+ C+ + L +H +VK G+ + + T+L+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 304 ANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
+ C + L A R F EI ++ SWT M++GF + EA+ +F+EM K + P+E +
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA---YATID 419
+ +L+A V E+ ++ + N E ++T + L+D + GK++EA ++ ID
Sbjct: 401 SVILTALP----VISPSEVHAQVVKT-NYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 420 NMKLKPNEDVWTALLS 435
+ + W+A+L+
Sbjct: 456 DKDIV----AWSAMLA 467
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 7/275 (2%)
Query: 102 FGDMGTARL-----VFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGT 156
FG + ++RL +FDK P RD S+ +++ G+ ++G +A +F ++ R G+ D +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 157 TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
++L L D G+ +H ++ ++ V S++D Y RK+F+
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFG--FLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 217 GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
+ ++ V+W +LISGY + +VL LF +M G P+ T + LG +
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
G VH+ +VK G V SLI++Y CG+ A F++ KS+ +W M++G+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
+G EA+ +F M + E F +V+ C++
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 197 SMIDMYC----NCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+ + +YC + + A LF+ +D S+ SL+ G+ + G + LF +
Sbjct: 28 AQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL 87
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
G D SVL + + L G +H +K G+ + +VGTSL+ Y +F
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
+ F+E+ ++++ +WT +++G+ + E +++F M + P+ F A L +
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
G+ G ++ + ++ ++ T + L++L + G + +A D ++K + W +
Sbjct: 208 GVGGRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNS 265
Query: 433 LLS 435
++S
Sbjct: 266 MIS 268
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/637 (35%), Positives = 350/637 (54%), Gaps = 16/637 (2%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
A +FD++ N W MI C G ++ + +M+ G ++D FT V
Sbjct: 221 NAYKVFDKMSELNVVTWTLMIT--RCMQMG-FPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKF---GDMGTARLVFDKMPVRD 119
AC +L +G ++H + GL DV SL+ MY K G + R VFD+M
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 120 LTSWNTMMSGYVKNGE-AGDAFVVFDHMRRSGLV-GDGTTMLALLSACGDLMDLKLGKAV 177
+ SW +++GY+KN A +A +F M G V + T + ACG+L D ++GK V
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
G + L++N V NS+I M+ D + A++ FE L+ K+ VS+N+ + G +
Sbjct: 396 LGQAFKRG--LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
Q +L ++ T S+L + + ++ G +HS +VK G N V
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+LISMY+ CGS A R FN + ++++ SWT M+TGF HG + FN+M+ + + P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+E + A+LSACSH GLV EG F M D+ ++P HY+C+VDLL RAG L +A+
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
I+ M + + VW L ACR+H N +L +++A+K+ E+DPN+ + Y+ LSNIYA +W
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
S+ E+ +H+F+ GDT+H + IY +L L ++K+
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRC 753
Query: 538 GYMPDTSSVLYDV----EAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDC 593
GY+PDT VL+ + + KE++L+ HSE++A+AF LI+T +R+ KNLRVC DC
Sbjct: 754 GYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDC 813
Query: 594 HTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
H MK +S + REI++RD+ RFHHF+DG CSC YW
Sbjct: 814 HNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 224/459 (48%), Gaps = 18/459 (3%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
W++M+ AC ++ ++ E L G +++ Y V++AC + +G G
Sbjct: 134 WSAMM---ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG 190
Query: 79 LVVVDG-LESDVYVGNSLISMYLK-FGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
++ G ESDV VG SLI M++K A VFDKM ++ +W M++ ++ G
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 137 GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTN 196
+A F M SG D T+ ++ SAC +L +L LGK +H + +R SG + + V
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR-SGLVDD---VEC 306
Query: 197 SMIDMYCNCDF---ISGARKLFEGLAVKDTVSWNSLISGYEK-CGGAFQVLELFGQMFIG 252
S++DMY C + RK+F+ + +SW +LI+GY K C A + + LF +M
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 253 GAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
G V P+ T S AC +S +G V K+G N++V S+ISM+
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
A RAF + +K+L S+ + G + +A + +E+ + + F ++LS ++
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWT 431
G + +G++I ++ + + + L+ + + G +D A + M+ + N WT
Sbjct: 487 VGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-NVISWT 544
Query: 432 ALLSACRLHR-NVKLAEISAQKLFE-MDPNKVSGYVCLS 468
++++ H +++ E Q + E + PN+V+ LS
Sbjct: 545 SMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 209/414 (50%), Gaps = 17/414 (4%)
Query: 53 DNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF 112
D+ T+ +LK+C +G VH ++ +E D + NSLIS+Y K GD A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 113 DKMP---VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLM 169
+ M RD+ SW+ MM+ Y NG DA VF GLV + A++ AC +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD-FISGARKLFEGLAVKDTVSWNS 228
+ +G+ G++++ +G ++ V S+IDM+ + A K+F+ ++ + V+W
Sbjct: 181 FVGVGRVTLGFLMK-TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 229 LISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
+I+ + G + + F M + G D+ T+ SV AC+ + L LG +HS+ ++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS- 298
Query: 289 YGMNTAVGTSLISMYANC---GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK-GREAI 344
G+ V SL+ MYA C GS + F+ + D S+ SWT ++TG+ + EAI
Sbjct: 299 -GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 345 SIFNEMLGK-NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVD 403
++F+EM+ + ++ P+ F++ AC + GK++ + + + ++ + ++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGLASNSSVANSVIS 416
Query: 404 LLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACR---LHRNVK-LAEISAQKL 453
+ ++ ++++A +++ K T L CR + K L+EI+ ++L
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 166/359 (46%), Gaps = 24/359 (6%)
Query: 114 KMPVRDLTS-------WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG-DGTTMLALLSAC 165
K+P++ S + ++ ++ G+ A D M R G+ D T +LL +C
Sbjct: 13 KLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSC 72
Query: 166 GDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGL---AVKD 222
D +LGK VH ++ + + + NS+I +Y + A +FE + +D
Sbjct: 73 IRARDFRLGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRD 130
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
VSW+++++ Y G +++F + G VP++ +V+ ACS + +G
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG 190
Query: 283 YLVKKG-YGMNTAVGTSLISMYANC-GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
+L+K G + + VG SLI M+ SF A++ F+++ + ++ +WT+M+T G
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
REAI F +M+ D+ ++V SAC+ + GK++ R V+
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--- 307
Query: 401 LVDLLGRA---GKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM 456
LVD+ + G +D+ D M+ + WTAL++ +N LA + EM
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEAINLFSEM 363
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/629 (36%), Positives = 336/629 (53%), Gaps = 7/629 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+L+ +N W S+I G A G+ S+ +LV + EM G ++FT+P KA
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLA--QNGHFST-ALVEFFEMRREGVVPNDFTFPCAFKA 117
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L L G ++H L V G DV+VG S MY K AR +FD++P R+L +W
Sbjct: 118 VASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETW 177
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N +S V +G +A F RR + T A L+AC D + L LG +HG V+R
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ + V N +ID Y C I + +F + K+ VSW SL++ Y + +
Sbjct: 238 SG--FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS 295
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
L+ + + + SVL AC+ ++ L LG S+H++ VK VG++L+ MY
Sbjct: 296 VLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 355
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML--GKNITPDEGV 361
CG + +AF+E+P+K+L + ++ G+ G+ A+++F EM G TP+
Sbjct: 356 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMT 415
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F ++LSACS +G V+ G +IF M Y +EP HYSC+VD+LGRAG ++ AY I M
Sbjct: 416 FVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
++P VW AL +ACR+H +L ++A+ LF++DP +V LSN +AA RW
Sbjct: 476 PIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEAN 535
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
YS+ + VH F A D SH + +I L L +++ GY P
Sbjct: 536 TVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKP 595
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
D LYD+E E K + HSE+LALAF L++ IRITKNLR+C DCH+ K VS
Sbjct: 596 DLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVS 655
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
+ REII+RD RFH F+DGICSC YW
Sbjct: 656 GSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 164/352 (46%), Gaps = 5/352 (1%)
Query: 75 RVHGLVVVDGLESDV--YVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
RV +V L+S ++ N LI+MY K +ARLV P R++ SW +++SG +
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
NG A V F MRR G+V + T A L GK +H V+ GR+ +
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK-CGRIL-DV 143
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
FV S DMYC ARKLF+ + ++ +WN+ IS G + +E F +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
P+ +T + L ACS L LG +H +++ G+ + +V LI Y C +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
F E+ K+ SW +V + + + +A ++ + + + ++VLSAC+
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
++ G+ I + VE T S LVD+ G+ G ++++ D M K
Sbjct: 324 AGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 171 LKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLI 230
++LG+ VH +V+ F+ N +I+MY D AR + ++ VSW SLI
Sbjct: 22 MRLGRVVHARIVKTLDS-PPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 231 SGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYG 290
SG + G L F +M G VP++ T A + + + G +H+ VK G
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 291 MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM 350
++ VG S MY A + F+EIP+++L +W ++ G+ REAI F E
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGK 410
+ P+ F A L+ACS ++ G ++ + R + + + L+D G+ +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQ 259
Query: 411 LDEAYATIDNMKLKPNEDVWTALLSA 436
+ + M K N W +L++A
Sbjct: 260 IRSSEIIFTEMGTK-NAVSWCSLVAA 284
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 364/698 (52%), Gaps = 77/698 (11%)
Query: 4 AQLIFDQ--IVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVL 61
A+ +F++ + +++ ++N+MI G++ + G S+ + L+ +M G K DNFT+ VL
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA---INLFCKMKHEGFKPDNFTFASVL 155
Query: 62 KACGDLLLREMG-IRVHGLVVVDGLESDVYVGNSLISMYLKFGD----MGTARLVFDKMP 116
+ E ++ H + G V N+L+S+Y K + +AR VFD++
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 117 VRDLTSWNTMMSGYVKNG---------EAGD-----------------------AFVVFD 144
+D SW TMM+GYVKNG E D A +
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 145 HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN 204
M SG+ D T +++ AC L+LGK VH YV+R R + NS++ +Y
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR---REDFSFHFDNSLVSLYYK 332
Query: 205 CDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV---------------------- 242
C AR +FE + KD VSWN+L+SGY G +
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 243 ---------LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNT 293
L+LF M G P + + +C+ + A G H+ L+K G+ +
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Query: 294 AVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK 353
+ G +LI+MYA CG A + F +P SW ++ G HG G EA+ ++ EML K
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Query: 354 NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDE 413
I PD VL+ACSH+GLVD+G++ F M Y + P HY+ L+DLL R+GK +
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 414 AYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAA 473
A + I+++ KP ++W ALLS CR+H N++L I+A KLF + P Y+ LSN++AA
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAA 632
Query: 474 EKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQ 533
+W + S+ E+ VH F DTSH +++ +Y L+DL ++
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKE 692
Query: 534 LKKVGYMPDTSSVLYDVEAE-VKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVD 592
++++GY+PDTS VL+DVE++ KE ML HSE++A+AF L+ PGTTIRI KNLR C D
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752
Query: 593 CHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
CH + +S ++ R+II+RD RFHHFR+G CSCG +W
Sbjct: 753 CHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 165/354 (46%), Gaps = 49/354 (13%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPV--RDLTSWNTMMSGYVKNGEAGDAFVVF 143
E D +++S Y GD+ AR VF+K PV RD +N M++G+ N + A +F
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 144 DHMRRSGLVGDGTTMLALLSACGDLM-DLKLGKAVHGYVVRN-SGRLSNNEFVTNSMIDM 201
M+ G D T ++L+ + D K H +++ +G +++ V+N+++ +
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS---VSNALVSV 193
Query: 202 YCNC----DFISGARKLFEGLAVKDTVSWNSLISGYEKCG-------------------- 237
Y C + ARK+F+ + KD SW ++++GY K G
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 238 -----------GAFQ-VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLV 285
G +Q LE+ +M G DE T SV+ AC+ L LG VH+Y++
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 286 KKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAIS 345
++ + SL+S+Y CG F A F ++P K L SW +++G+ G EA
Sbjct: 314 RRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 346 IFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYS 399
IF EM KNI + ++S + +G +EG ++F M R+ EP +S
Sbjct: 373 IFKEMKEKNILS----WMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFS 421
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 148/338 (43%), Gaps = 81/338 (23%)
Query: 171 LKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----------- 219
L+L +AVHG ++ + + N +ID+YC ++ AR+LF+ ++
Sbjct: 30 LQLARAVHGNII--TFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 220 ----------------------VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPD 257
++DTV +N++I+G+ + + LF +M G PD
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 258 EVTVISVLGACSRISALLLGS-SVHSYLVKKGYGMNTAVGTSLISMYANCGS----FLCA 312
T SVL + ++ H+ +K G G T+V +L+S+Y+ C S A
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 313 HRAFNEIPDKSLASWTVMVTGF------------------------------GIHGKG-- 340
+ F+EI +K SWT M+TG+ G +G
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY-S 399
+EA+ + M+ I DE + +V+ AC+ +GL+ GK++ + R E + H+ +
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDN 324
Query: 400 CLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLS 435
LV L + GK DEA A + M P +D+ W ALLS
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKM---PAKDLVSWNALLS 359
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+LIF ++ KN W MI G A + G L L+ M G + ++ + +K
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEG---LKLFSCMKREGFEPCDYAFSGAIK 425
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
+C L G + H ++ G +S + GN+LI+MY K G + AR VF MP D S
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN +++ ++G +A V++ M + G+ D T+L +L+AC + G+ +
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD-SM 544
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSLISG 232
R+ +ID+ C S A + E L K T W +L+SG
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/628 (35%), Positives = 334/628 (53%), Gaps = 48/628 (7%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
IF +N F+ N++IRG +A SS R +L ML G K D T+PFVLK+
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFIL---MLRLGVKPDRLTFPFVLKSNSK 138
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTS 122
L R +G +H + + ++ D +V SL+ MY K G + A VF++ P R +
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN +++GY + + A +F M
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPE---------------------------------- 224
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
RNSG S ++I Y + ++ A++LFE + K+ VSW +LI+G+ + G
Sbjct: 225 RNSGSWS-------TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETA 277
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ + +M G P+E T+ +VL ACS+ AL G +H Y++ G ++ A+GT+L+ M
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDM 337
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG CA F+ + K + SWT M+ G+ +HG+ +AI F +M+ PDE VF
Sbjct: 338 YAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF 397
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
AVL+AC +S VD G F M DY +EPT HY +VDLLGRAGKL+EA+ ++NM
Sbjct: 398 LAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP 457
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
+ P+ W AL AC+ H+ + AE +Q L E+DP Y+ L +A++
Sbjct: 458 INPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEK 517
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
+S+ EL+ +++F AGD SH+ + +I KL ++ + GY P
Sbjct: 518 RRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPG 577
Query: 543 TSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
++D+E E KE + HSE+LAL + T PGTTIRI KNLR+C DCH++MK VSK
Sbjct: 578 ADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSK 637
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
+ R+I++RD +FHHF+DG CSCG YW
Sbjct: 638 ISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+ +F+ + KN W ++I G+ S G+ + ++ Y EML G K + +T V
Sbjct: 243 LNRAKQLFELMPEKNVVSWTTLINGF--SQTGDYET-AISTYFEMLEKGLKPNEYTIAAV 299
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC GIR+HG ++ +G++ D +G +L+ MY K G++ A VF M +D+
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLG 174
SW M+ G+ +G A F M SG D LA+L+AC + ++ LG
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 28/294 (9%)
Query: 154 DGTTMLALLSACGDLMDLKLGKAVHGYVVRN---SGRLSNNEFVTNSMIDMYCNCDFISG 210
D + ++L+ AC D L+ VH ++R S R++ +S++ + D+
Sbjct: 28 DESHFISLIHACKDTASLR---HVHAQILRRGVLSSRVAAQLVSCSSLLK---SPDY--- 78
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
+ +F ++ N+LI G + + F M G PD +T VL + S+
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLAS 326
+ LG ++H+ +K ++ V SL+ MYA G A + F E PD+ S+
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
W V++ G+ A ++F M +N G ++ ++ SG ++ K++F M
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERN----SGSWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPNEDVWTALLSAC 437
E ++ L++ + G + A +T M LKPNE A+LSAC
Sbjct: 255 -----EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/621 (35%), Positives = 333/621 (53%), Gaps = 38/621 (6%)
Query: 44 EMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFG 103
++L +K TY +++ C E G +VH + G + + N L+ MY K G
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 104 DMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR----------SGLVG 153
+ AR VFD+MP RDL SWN M++GY + G +A +FD M +G V
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 154 DGTTMLALLSACGDLMD------------------------LKLGKAVHGYVVRNSGRLS 189
AL+ LM ++ GK +HG++VR L
Sbjct: 195 KDQPEEALV--LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG--LD 250
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM 249
++E + +S++DMY C I AR +F+ + KD VSW S+I Y K + LF ++
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 250 FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSF 309
P+E T VL AC+ ++ LG VH Y+ + G+ + +SL+ MY CG+
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
A + P L SWT ++ G +G+ EA+ F+ +L PD F VLSAC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
+H+GLV++G E FY +T + + T+ HY+CLVDLL R+G+ ++ + I M +KP++ +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 430 WTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXX 489
W ++L C + N+ LAE +AQ+LF+++P YV ++NIYAA +W
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 490 XXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYD 549
P S+ E+ + H F A DTSH + I L++L +++K+ GY+P TS VL+D
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHD 610
Query: 550 VEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREII 609
VE E KE+ L HSE+LA+AFA+++T GT I++ KNLR CVDCH +K +S + R+I
Sbjct: 611 VEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKIT 670
Query: 610 MRDICRFHHFRDGICSCGGYW 630
+RD RFH F +G CSCG YW
Sbjct: 671 VRDSTRFHCFENGQCSCGDYW 691
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 195/415 (46%), Gaps = 43/415 (10%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPF 59
+ +A+ +FD++ K+S+ W +M+ GY + +LVLY M N FT
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYV---KKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+ A + G +HG +V GL+SD + +SL+ MY K G + AR +FDK+ +D
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ SW +M+ Y K+ + F +F + S + T +L+AC DL +LGK VHG
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
Y+ R F ++S++DMY C I A+ + +G D VSW SLI G + G
Sbjct: 344 YMTRVG--FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ L+ F + G PD VT ++VL AC+ H+ LV+KG L
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTFVNVLSACT-----------HAGLVEKG----------L 440
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
Y+ +H + + +T +V G+ + S+ +EM K P +
Sbjct: 441 EFFYSITEKHRLSHTSDH---------YTCLVDLLARSGRFEQLKSVISEMPMK---PSK 488
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP-TTTHYSCLVDLLGRAGKLDE 413
++ +VL CS G +D +E ++ + +EP Y + ++ AGK +E
Sbjct: 489 FLWASVLGGCSTYGNIDLAEEAAQEL---FKIEPENPVTYVTMANIYAAAGKWEE 540
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 317/539 (58%), Gaps = 3/539 (0%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
N LI+ Y++ GD+ AR VFD+MP R LT+WN M++G ++ + +F M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
D T+ ++ S L + +G+ +HGY ++ L + V +S+ MY +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL--DLVVNSSLAHMYMRNGKLQDGE 146
Query: 213 KLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
+ + V++ V+WN+LI G + G VL L+ M I G P+++T ++VL +CS ++
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVT 332
G +H+ +K G AV +SLISMY+ CG A +AF+E D+ W+ M++
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 333 GFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
+G HG+G EAI +FN M + N+ +E F +L ACSHSGL D+G E+F M Y
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQ 451
+P HY+C+VDLLGRAG LD+A A I +M +K + +W LLSAC +H+N ++A+ +
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 452 KLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFF 511
++ ++DPN + YV L+N++A+ KRW S+FE VHQF
Sbjct: 387 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446
Query: 512 AGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFA 571
GD S +S +IY+ LK+L ++K GY PDT+SVL+D++ E KE L HSE+LA+AFA
Sbjct: 447 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 506
Query: 572 LINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
L+ G IRI KNLRVC DCH K +S + +REI +RD RFHHF +G CSCG YW
Sbjct: 507 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 177/393 (45%), Gaps = 12/393 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ + WN+MI G + L L+REM G D +T V
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLI---QFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG 100
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L +G ++HG + GLE D+ V +SL MY++ G + +V MPVR+L +W
Sbjct: 101 SAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAW 160
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
NT++ G +NG ++ M+ SG + T + +LS+C DL G+ +H ++
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
S+ V +S+I MY C + A K F +D V W+S+IS Y G + +
Sbjct: 221 IG--ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAI 278
Query: 244 ELFGQMFIGGAVP-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TSLI 300
ELF M + +EV +++L ACS G + +V+K YG + T ++
Sbjct: 279 ELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK-YGFKPGLKHYTCVV 337
Query: 301 SMYANCGSFLCAHRAFNEIPDKS-LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ G A +P K+ + W +++ IH A +F E+L I P++
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPND 395
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVE 392
+L+ S K RD NV+
Sbjct: 396 SACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 428
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 121/256 (47%), Gaps = 3/256 (1%)
Query: 186 GRLSNNEFVT-NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLE 244
GR+ +++ N +I+ Y + ARK+F+ + + +WN++I+G + + L
Sbjct: 18 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 77
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
LF +M G PDE T+ SV + + ++ +G +H Y +K G ++ V +SL MY
Sbjct: 78 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 137
Query: 305 NCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTA 364
G +P ++L +W ++ G +G + ++ M P++ F
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
VLS+CS + +G++I + + S L+ + + G L +A A + +
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDA-AKAFSERED 255
Query: 425 PNEDVWTALLSACRLH 440
+E +W++++SA H
Sbjct: 256 EDEVMWSSMISAYGFH 271
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 350/629 (55%), Gaps = 10/629 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + ++ WNS+I A S ++ +YR M++ D +T V KA
Sbjct: 118 ARQVFDGMSERHIVTWNSLI---AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA 174
Query: 64 CGDLLLREMGIRVHGLVVVDGLE-SDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
DL L + R HGL V+ GLE S+V+VG++L+ MY+KFG A+LV D++ +D+
Sbjct: 175 FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVL 234
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
++ GY + GE +A F M + + T ++L +CG+L D+ GK +HG +V
Sbjct: 235 ITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV 294
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
++ + S++ MY C + + ++F+ + + VSW SLISG + G
Sbjct: 295 KSG--FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMA 352
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
L F +M P+ T+ S L CS ++ G +H + K G+ + G+ LI +
Sbjct: 353 LIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDL 412
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y CG A F+ + + + S M+ + +G GREA+ +F M+ + P++
Sbjct: 413 YGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTV 472
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
+VL AC++S LV+EG E+F +D + T HY+C+VDLLGRAG+L+EA +
Sbjct: 473 LSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV- 530
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
+ P+ +W LLSAC++HR V++AE +K+ E++P + +SN+YA+ +W
Sbjct: 531 INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIE 590
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDT-SHQQSDDIYAKLKDLNEQLKKVGYMP 541
P+ S+ E+NK H F AGD SH S+ I L++L ++ K +GY+
Sbjct: 591 MKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVE 650
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
D S V D+E KE+ L HSE+LA+AFA + G +IRI KNLRVCVDCH+ +K+VS
Sbjct: 651 DKSCVFQDMEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVS 709
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
++M REII RD RFHHFRDG CSCG YW
Sbjct: 710 RVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 2/330 (0%)
Query: 92 GNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL 151
G+ L+ LK GD+ AR VFD M R + +WN++++ +K+ + +A ++ M + +
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
+ D T+ ++ A DL K + HG V +S N FV ++++DMY A
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVS-NVFVGSALVDMYVKFGKTREA 220
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
+ + + + KD V +LI GY + G + ++ F M + P+E T SVL +C +
Sbjct: 221 KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNL 280
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
+ G +H +VK G+ A TSL++MY C + R F I + SWT ++
Sbjct: 281 KDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLI 340
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
+G +G+ A+ F +M+ +I P+ ++ L CS+ + +EG++I +T+ Y
Sbjct: 341 SGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGF 399
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ S L+DL G+ G D A D +
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 8/302 (2%)
Query: 161 LLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV 220
LL C D + K + ++++ SG + E + ++D C I AR++F+G++
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLK-SGFPA--EISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 221 KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSV 280
+ V+WNSLI+ K + + +E++ M +PDE T+ SV A S +S
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 281 HSYLVKKGYGM-NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
H V G + N VG++L+ MY G A + + +K + T ++ G+ G+
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 340 GREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYS 399
EA+ F ML + + P+E + +VL +C + + GK I M + E +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFESALASQT 306
Query: 400 CLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE--MD 457
L+ + R +D++ ++ PN+ WT+L+S + ++A I +K+ +
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 458 PN 459
PN
Sbjct: 366 PN 367
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 313/559 (55%), Gaps = 6/559 (1%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++H +V+ G + L+ + GDM AR VFD+M + WNT+ GYV+N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS-GRLSNNEF 193
++ +++ MR G+ D T ++ A L D G A+H +VV+ G L
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG---I 145
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
V ++ MY +S A LFE + VKD V+WN+ ++ + G + LE F +M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
D TV+S+L AC ++ +L +G ++ K+ N V + + M+ CG+ A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
F E+ +++ SW+ M+ G+ ++G REA+++F M + + P+ F VLSACSH+G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 374 LVDEGKEIFYKMTR--DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWT 431
LV+EGK F M + D N+EP HY+C+VDLLGR+G L+EAY I M ++P+ +W
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 432 ALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXX 491
ALL AC +HR++ L + A L E P+ S +V LSNIYAA +W
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 492 XXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVE 551
+YS E +H F GD SH QS IY KL ++ ++++K+GY+PDT SV +DVE
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505
Query: 552 AEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMR 611
E KE L HSE+LA+AF LI PG IR+ KNLR C DCH K VS L S EIIMR
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565
Query: 612 DICRFHHFRDGICSCGGYW 630
D RFHHFR+G+CSC +W
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 176/370 (47%), Gaps = 36/370 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +FD++ FLWN++ +GY SL+LY++M G + D FTYPFV
Sbjct: 59 MCYARQVFDEMHKPRIFLWNTLFKGYV---RNQLPFESLLLYKKMRDLGVRPDEFTYPFV 115
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+KA L G +H VV G V L+ MY+KFG++ +A +F+ M V+DL
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDL 175
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WN ++ V+ G + A F+ M + D T++++LSACG L L++G+ ++
Sbjct: 176 VAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR 235
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+ + N V N+ +DM+ C AR LFE + ++ VSW+++I GY G +
Sbjct: 236 ARKEE--IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 293
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ L LF M G P+ VT + VL ACS H+ LV +G
Sbjct: 294 EALTLFTTMQNEGLRPNYVTFLGVLSACS-----------HAGLVNEG------------ 330
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
S + N P K + MV G G EA +M + PD G
Sbjct: 331 ---KRYFSLMVQSNDKNLEPRKE--HYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTG 382
Query: 361 VFTAVLSACS 370
++ A+L AC+
Sbjct: 383 IWGALLGACA 392
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/593 (36%), Positives = 324/593 (54%), Gaps = 39/593 (6%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFG-DMGT-ARLVFDKMPVRDLTSWNTMMSGYVK 132
++HG V+ GL+ Y+ LI K G M AR V + + R+ W ++ GY
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
G+ +A ++ MR+ + T ALL ACG + DL LG+ H R G
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF--V 184
Query: 193 FVTNSMIDMYCNCDFISGARK-------------------------------LFEGLAVK 221
+V N+MIDMY C+ I ARK LFE L K
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
D V+W ++++G+ + + LE F +M G DEVTV + AC+++ A
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 282 SYLVKKGYGM--NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
K GY + +G++LI MY+ CG+ A F + +K++ +++ M+ G HG+
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 340 GREAISIFNEMLGKN-ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY 398
+EA+ +F+ M+ + I P+ F L ACSHSGLVD+G+++F M + + V+PT HY
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
Query: 399 SCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDP 458
+C+VDLLGR G+L EA I M ++P+ VW ALL ACR+H N ++AEI+A+ LFE++P
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP 484
Query: 459 NKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSF-FELNKMVHQFFAGDTSH 517
+ + Y+ LSN+YA+ W P+ S+ + N +H+FF G+ +H
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNH 544
Query: 518 QQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGP 577
S+ I KL++L E+L +GY PD SSV YDV K +L H+E+LALAF+L+ T
Sbjct: 545 PMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNR 604
Query: 578 GTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+TI I KNLR+C+DCH M++ S++ + IIMRD RFHHFR G CSCG +W
Sbjct: 605 DSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 178/402 (44%), Gaps = 72/402 (17%)
Query: 2 PQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVL 61
P A+ + + + F+N FLW ++IRGYA + + + +Y M +FT+ +L
Sbjct: 100 PYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEA---IAMYGCMRKEEITPVSFTFSALL 156
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD-- 119
KACG + +G + H VYVGN++I MY+K + AR VFD+MP RD
Sbjct: 157 KACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVI 216
Query: 120 -----------------------------LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
+ +W M++G+ +N + +A FD M +SG
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG 276
Query: 151 LVGDGTTMLALLSACGDLMDLKLG-KAVHGYVVRNSGRLSNNEFVTNS-MIDMYCNCDFI 208
+ D T+ +SAC L K +AV + + SG ++ V S +IDMY C +
Sbjct: 277 IRADEVTVAGYISACAQLGASKYADRAVQ--IAQKSGYSPSDHVVIGSALIDMYSKCGNV 334
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGA 267
A +F + K+ +++S+I G G A + L LF M + P+ VT + L A
Sbjct: 335 EEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
CS HS LV +G + SMY + F P + +
Sbjct: 395 CS-----------HSGLVDQGRQV-------FDSMY----------QTFGVQPTRD--HY 424
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
T MV G G+ +EA+ + M ++ P GV+ A+L AC
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTM---SVEPHGGVWGALLGAC 463
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 13/228 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A +F+ + K+ W +M+ G+A +A +L + M G +AD T
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNA---KPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESD--VYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+ AC L + R + G V +G++LI MY K G++ A VF M +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
++ ++++M+ G +G A +A +F +M ++ + + T + L AC + G+ V
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS 225
+ + G + T C D + +L E L + T+S
Sbjct: 408 FDSMYQTFGVQPTRDHYT-------CMVDLLGRTGRLQEALELIKTMS 448
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/465 (41%), Positives = 286/465 (61%), Gaps = 5/465 (1%)
Query: 168 LMDLKLGKAVHGYVVRNS-GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
+ D++LG+ +H V+R+ G L +V NS++ +Y NC ++ A K+F+ + KD V+W
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLI---YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 57
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
NS+I+G+ + G + L L+ +M G PD T++S+L AC++I AL LG VH Y++K
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
G N L+ +YA CG A F+E+ DK+ SWT ++ G ++G G+EAI +
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 347 FNEMLG-KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLL 405
F M + + P E F +L ACSH G+V EG E F +M +Y +EP H+ C+VDLL
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 406 GRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYV 465
RAG++ +AY I +M ++PN +W LL AC +H + LAE + ++ +++PN YV
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 466 CLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYA 525
LSN+YA+E+RW P +S E+ VH+F GD SH QSD IYA
Sbjct: 298 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 357
Query: 526 KLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITK 585
KLK++ +L+ GY+P S+V DVE E KE + HSE++A+AF LI+T + I + K
Sbjct: 358 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 417
Query: 586 NLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
NLRVC DCH +K+VSK+ +REI++RD RFHHF++G CSC YW
Sbjct: 418 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 146/271 (53%), Gaps = 7/271 (2%)
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
+G +H +V+ G S +YV NSL+ +Y GD+ +A VFDKMP +DL +WN++++G+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+NG+ +A ++ M G+ DG T+++LLSAC + L LGK VH Y+++ L+ N
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG--LTRN 123
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM-F 250
+N ++D+Y C + A+ LF+ + K++VSW SLI G G + +ELF M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT--SLISMYANCGS 308
G +P E+T + +L ACS + G + ++ Y + + ++ + A G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 309 FLCAHRAFNEIP-DKSLASWTVMVTGFGIHG 338
A+ +P ++ W ++ +HG
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FD++ K+ WNS+I G+A +L LY EM S G K D FT +L A
Sbjct: 42 AYKVFDKMPEKDLVAWNSVINGFA---ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 98
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + +G RVH ++ GL +++ N L+ +Y + G + A+ +FD+M ++ SW
Sbjct: 99 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 158
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRS-GLVGDGTTMLALLSAC 165
+++ G NG +A +F +M + GL+ T + +L AC
Sbjct: 159 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 201
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/630 (34%), Positives = 341/630 (54%), Gaps = 12/630 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F+++ ++ WNSMI GY G SS L+L++EML G K D F+ L A
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSS---LMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 64 CGDLLLREMGIRVHGLVVVDGLES-DVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C + +MG +H V +E+ DV V S++ MY K+G++ A +F+ M R++ +
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
WN M+ Y +NG DAF+ F M ++GL D T + LL A L G+ +HGY
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYA 356
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+R G L + T ++IDMY C + A +F+ +A K+ +SWNS+I+ Y + G +
Sbjct: 357 MRR-GFLPHMVLET-ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
LELF +++ VPD T+ S+L A + +L G +H+Y+VK Y NT + SL+
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA CG A + FN I K + SW ++ + +HG GR ++ +F+EM+ + P++
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F ++L+ACS SG+VDEG E F M R+Y ++P HY C++DL+GR G A ++ M
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
P +W +LL+A R H+++ +AE +A+++F+M+ + YV L N+YA RW
Sbjct: 595 PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVN 654
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVG-YM 540
S S E H F GD SH ++ IY L ++ + + Y+
Sbjct: 655 RIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYV 714
Query: 541 PDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMV 600
S + + + + HS RLA F LI+T G + + N R+C CH ++
Sbjct: 715 HCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKA 774
Query: 601 SKLMSREIIMRDICRFHHFRDGICSCGGYW 630
S+L REI++ D FHHF +G CSCG YW
Sbjct: 775 SRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 248/469 (52%), Gaps = 25/469 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A +FD++ ++FLWN MI+G+ S G ++ Y M+ G KAD FTYPFV
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFT-SCG--LYIEAVQFYSRMVFAGVKADTFTYPFV 136
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+K+ + E G ++H +V+ G SDVYV NSLIS+Y+K G A VF++MP RD+
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN+M+SGY+ G+ + ++F M + G D + ++ L AC + K+GK +H +
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Query: 181 VVRNSGRLSNNE-FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
VR+ R+ + V S++DMY +S A ++F G+ ++ V+WN +I Y + G
Sbjct: 257 AVRS--RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 240 FQVLELFGQMF-IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
F +M G PD +T I++L A SA+L G ++H Y +++G+ + + T+
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETA 370
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
LI MY CG A F+ + +K++ SW ++ + +GK A+ +F E+ ++ PD
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD 430
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
++L A + S + EG+EI + + T + LV + G L++A
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 419 DNMKLKPNEDV--WTALLSACRLHRNVKLAEISAQKLFEM-----DPNK 460
+++ LK DV W +++ A +H IS EM +PNK
Sbjct: 490 NHILLK---DVVSWNSIIMAYAVH---GFGRISVWLFSEMIASRVNPNK 532
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 1/256 (0%)
Query: 202 YCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTV 261
+ + + A +LF+ + D WN +I G+ CG + ++ + +M G D T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 262 ISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD 321
V+ + + IS+L G +H+ ++K G+ + V SLIS+Y G A + F E+P+
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 322 KSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEI 381
+ + SW M++G+ G G ++ +F EML PD + L ACSH GKEI
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 382 FYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHR 441
R + ++D+ + G++ A + M ++ N W ++ +
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNG 312
Query: 442 NVKLAEISAQKLFEMD 457
V A + QK+ E +
Sbjct: 313 RVTDAFLCFQKMSEQN 328
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/602 (34%), Positives = 331/602 (54%), Gaps = 23/602 (3%)
Query: 37 RSLVLYREMLSFGQKADNFTYPFVLKAC--------GDLLLREMGIRVHGLVVVDGLESD 88
R++ + S G AD+ TY ++K C G+L+ R + +G
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHL--------YFNGHRPM 95
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
+++ N LI+MY+KF + A +FD+MP R++ SW TM+S Y K A + M R
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
+ + T ++L +C + D+++ +H +++ L ++ FV +++ID++
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG--LESDVFVRSALIDVFAKLGEP 210
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
A +F+ + D + WNS+I G+ + + LELF +M G + ++ T+ SVL AC
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 269 SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT 328
+ ++ L LG H ++VK Y + + +L+ MY CGS A R FN++ ++ + +W+
Sbjct: 271 TGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWS 328
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
M++G +G +EA+ +F M P+ VL ACSH+GL+++G F M +
Sbjct: 329 TMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEI 448
Y ++P HY C++DLLG+AGKLD+A ++ M+ +P+ W LL ACR+ RN+ LAE
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEY 448
Query: 449 SAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVH 508
+A+K+ +DP Y LSNIYA ++W P S+ E+NK +H
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Query: 509 QFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLAL 568
F GD SH Q ++ KL L +L +GY+P+T+ VL D+E E E L HSE+LAL
Sbjct: 509 AFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLAL 568
Query: 569 AFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGG 628
AF L+ IRI KNLR+C DCH K+ SKL R I++RD R+HHF+DG CSCG
Sbjct: 569 AFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGD 628
Query: 629 YW 630
YW
Sbjct: 629 YW 630
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 43/366 (11%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FDQ+ +N W +MI Y+ + LVL ML + + +TY VL++
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVL---MLRDNVRPNVYTYSSVLRS 171
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + M +H ++ +GLESDV+V ++LI ++ K G+ A VFD+M D W
Sbjct: 172 CNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N+++ G+ +N + A +F M+R+G + + T+ ++L AC L L+LG H ++V+
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
L + N+++DMYC C + A ++F + +D ++W+++ISG + G + + L
Sbjct: 289 YDQDL----ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+LF +M G P+ +T++ VL ACS + LL + +KK YG+
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSH-AGLLEDGWYYFRSMKKLYGI------------ 391
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
D + M+ G GK +A+ + NEM PD +
Sbjct: 392 -----------------DPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWR 431
Query: 364 AVLSAC 369
+L AC
Sbjct: 432 TLLGAC 437
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/546 (39%), Positives = 308/546 (56%), Gaps = 11/546 (2%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
E D + N ++S Y++ + A+ FD+MP +D SWNTM++GY + GE A +F
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M V M++ CGDL KA H + V + +MI Y
Sbjct: 181 MMEKNEVS-WNAMISGYIECGDL-----EKASHFFKVAPVRGV----VAWTAMITGYMKA 230
Query: 206 DFISGARKLFEGLAV-KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
+ A +F+ + V K+ V+WN++ISGY + L+LF M G P+ + S
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L CS +SAL LG +H + K + TSLISMY CG A + F + K +
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
+W M++G+ HG +A+ +F EM+ I PD F AVL AC+H+GLV+ G F
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 410
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
M RDY VEP HY+C+VDLLGRAGKL+EA I +M +P+ V+ LL ACR+H+NV+
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVE 470
Query: 445 LAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELN 504
LAE +A+KL +++ +GYV L+NIYA++ RW P YS+ E+
Sbjct: 471 LAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIR 530
Query: 505 KMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSE 564
VH F + D H + D I+ KLK+L +++K GY P+ L++VE E KEK+L HSE
Sbjct: 531 NKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSE 590
Query: 565 RLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGIC 624
+LA+AF I G+ I++ KNLR+C DCH +K +S++ REII+RD RFHHF+DG C
Sbjct: 591 KLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSC 650
Query: 625 SCGGYW 630
SCG YW
Sbjct: 651 SCGDYW 656
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+AQ FD++ FK++ WN+MI GYA G +R L+ M+ + + N ++
Sbjct: 142 KAQSFFDRMPFKDAASWNTMITGYA-RRGEMEKARE--LFYSMMEKNEVSWNAMISGYIE 198
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV-RDLT 121
CGDL E + V G V ++I+ Y+K + A +F M V ++L
Sbjct: 199 -CGDL---EKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+WN M+SGYV+N D +F M G+ + + + + L C +L L+LG+ +H V
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+++ L N+ S+I MYC C + A KLFE + KD V+WN++ISGY + G A +
Sbjct: 311 SKST--LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L LF +M PD +T ++VL AC+ H+ LV G A S++
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACN-----------HAGLVNIG----MAYFESMVR 413
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
Y PD +T MV G GK EA+ + M P V
Sbjct: 414 DY-----------KVEPQPD----HYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAV 455
Query: 362 FTAVLSAC 369
F +L AC
Sbjct: 456 FGTLLGAC 463
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 51/245 (20%)
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
F N +I I GA ++F G+ K+T++WNSL+ G K +++E Q+F
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK--DPSRMMEAH-QLFDE 118
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
PD SY + ++S Y +F A
Sbjct: 119 IPEPD----------------------TFSYNI-------------MLSCYVRNVNFEKA 143
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
F+ +P K ASW M+TG+ G+ +A +F M+ KN E + A++S
Sbjct: 144 QSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVSWNAMISGYIEC 199
Query: 373 GLVDEGKEIFYKMTRDYNVEPT--TTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVW 430
G +++ F V P ++ ++ +A K++ A A +M + N W
Sbjct: 200 GDLEKASHFF-------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 431 TALLS 435
A++S
Sbjct: 253 NAMIS 257
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/636 (36%), Positives = 349/636 (54%), Gaps = 11/636 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +F + K+S WNSMI G ++ Y+ M +FT
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLD---QNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L +C L ++G ++HG + G++ +V V N+L+++Y + G + R +F MP D
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 121 TSWNTMMSGYVKNGEA-GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SWN+++ ++ + +A V F + +R+G + T ++LSA L +LGK +HG
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGG 238
++N+ +++ N++I Y C + G K+F +A + D V+WNS+ISGY
Sbjct: 542 LALKNN--IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ L+L M G D +VL A + ++ L G VH+ V+ + VG++
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM-LGKNITP 357
L+ MY+ CG A R FN +P ++ SW M++G+ HG+G EA+ +F M L P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
D F VLSACSH+GL++EG + F M+ Y + P H+SC+ D+LGRAG+LD+
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779
Query: 418 IDNMKLKPNEDVWTALLSA-CRLH-RNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEK 475
I+ M +KPN +W +L A CR + R +L + +A+ LF+++P YV L N+YAA
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839
Query: 476 RWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK 535
RW YS+ + VH F AGD SH +D IY KLK+LN +++
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Query: 536 KVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGT-TIRITKNLRVCVDCH 594
GY+P T LYD+E E KE++L HSE+LA+AF L T IRI KNLRVC DCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959
Query: 595 TVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+ K +SK+ R+II+RD RFHHF+DG CSC +W
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 210/438 (47%), Gaps = 18/438 (4%)
Query: 8 FDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTY-PFVLKACGD 66
F I KNS WNS+I Y+ + S+ R ++ M G + +T+ V AC
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFR---IFSSMQYDGSRPTEYTFGSLVTTACS- 218
Query: 67 LLLREMGIRVHGLVVV----DGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
L E +R+ ++ GL +D++VG+ L+S + K G + AR VF++M R+ +
Sbjct: 219 --LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLS----ACGDLMDLKLGKAVH 178
N +M G V+ +A +F M V + ++ L S + + + LK G+ VH
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVH 336
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
G+V+ +G + + N +++MY C I+ AR++F + KD+VSWNS+I+G ++ G
Sbjct: 337 GHVI-TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ +E + M +P T+IS L +C+ + LG +H +K G +N +V +
Sbjct: 396 FIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNA 455
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG-REAISIFNEMLGKNITP 357
L+++YA G + F+ +P+ SW ++ + EA+ F
Sbjct: 456 LMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL 515
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+ F++VLSA S + GK+I + + N+ T + L+ G+ G++D
Sbjct: 516 NRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 418 IDNMKLKPNEDVWTALLS 435
M + + W +++S
Sbjct: 575 FSRMAERRDNVTWNSMIS 592
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 207/451 (45%), Gaps = 33/451 (7%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ +N W ++ GY+ +LV R+M+ G ++ + + VL+A
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYS---RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRA 111
Query: 64 CGDL----LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLK-FGDMGTARLVFDKMPVR 118
C ++ +L G ++HGL+ D V N LISMY K G +G A F + V+
Sbjct: 112 CQEIGSVGIL--FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK 169
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLM--DLKLGKA 176
+ SWN+++S Y + G+ AF +F M+ G T +L++ L D++L +
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
+ ++ SG L+ + FV + ++ + +S ARK+F + ++ V+ N L+ G +
Sbjct: 230 IM-CTIQKSGLLT-DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS-----ALLLGSSVHSYLVKKGY-G 290
+ +LF M V E VI +L + S L G VH +++ G
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVI-LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 291 MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM 350
+G L++MYA CGS A R F + DK SW M+TG +G EA+ + M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIF---YKMTRDYNVEPTTTHYSCLVDLLGR 407
+I P + LS+C+ G++I K+ D NV + L+ L
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNA----LMTLYAE 462
Query: 408 AGKLDEAYATIDNMKLKPNED--VWTALLSA 436
G L+E +M P D W +++ A
Sbjct: 463 TGYLNECRKIFSSM---PEHDQVSWNSIIGA 490
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 163/316 (51%), Gaps = 15/316 (4%)
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
H + + L+ DVY+ N+LI+ YL+ GD +AR VFD+MP+R+ SW ++SGY +NGE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 137 GDAFVVFDHMRRSGLVGDGTTMLALLSACGDL--MDLKLGKAVHGYVVRNSGRLSNNEFV 194
+A V M + G+ + +++L AC ++ + + G+ +HG + + S + + V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS--YAVDAVV 141
Query: 195 TNSMIDMYCNC-DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
+N +I MY C + A F + VK++VSWNS+IS Y + G +F M G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 254 AVPDEVTVIS-VLGACSRISA-LLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
+ P E T S V ACS + L + + K G + VG+ L+S +A GS
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACS 370
A + FN++ ++ + ++ G G EA +F +M +++P+ + +LS+
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES--YVILLSSFP 319
Query: 371 HSGLVDE-----GKEI 381
L +E G+E+
Sbjct: 320 EYSLAEEVGLKKGREV 335
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 312/544 (57%), Gaps = 5/544 (0%)
Query: 90 YVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRS 149
++G+ L+ YL+ G A +FD+MP RDL SWN+++SGY G G F V M S
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 150 --GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
G + T L+++SAC + G+ +HG V++ G L + V N+ I+ Y
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK-FGVLEEVK-VVNAFINWYGKTGD 184
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
++ + KLFE L++K+ VSWN++I + + G A + L F G PD+ T ++VL +
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRS 244
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C + + L +H ++ G+ N + T+L+ +Y+ G + F+EI +W
Sbjct: 245 CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAW 304
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
T M+ + HG GR+AI F M+ I+PD FT +L+ACSHSGLV+EGK F M++
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
Y ++P HYSC+VDLLGR+G L +AY I M ++P+ VW ALL ACR++++ +L
Sbjct: 365 RYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT 424
Query: 448 ISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMV 507
+A++LFE++P YV LSNIY+A W S+ E +
Sbjct: 425 KAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKI 484
Query: 508 HQFFAGDTSHQQSDDIYAKLKDLNEQLK-KVGYMPDTSSVLYDVEAEVKEKMLWDHSERL 566
H+F GD SH +S+ I KLK++ +++K ++GY T VL+DV +VKE+M+ HSE++
Sbjct: 485 HKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKI 544
Query: 567 ALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSC 626
A+AF L+ P I I KNLR+C DCH K +S + R II+RD RFHHF DG CSC
Sbjct: 545 AMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSC 604
Query: 627 GGYW 630
YW
Sbjct: 605 SDYW 608
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 178/368 (48%), Gaps = 40/368 (10%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLS-FGQKADNFTYPFVLK 62
A+ +FD++ ++ WNS+I GY S G VL R M+S G + + T+ ++
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGY--SGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC +E G +HGLV+ G+ +V V N+ I+ Y K GD+ ++ +F+ + +++L S
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WNTM+ +++NG A F+ RR G D T LA+L +C D+ ++L + +HG ++
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
G S N+ +T +++D+Y + + +F + D+++W ++++ Y G
Sbjct: 263 --FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG-YGMNTAVGTSLIS 301
++ F M G PD VT +L ACS HS LV++G + T I
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACS-----------HSGLVEEGKHYFETMSKRYRI- 368
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
D L ++ MV G G ++A + EM + P GV
Sbjct: 369 -------------------DPRLDHYSCMVDLLGRSGLLQDAYGLIKEM---PMEPSSGV 406
Query: 362 FTAVLSAC 369
+ A+L AC
Sbjct: 407 WGALLGAC 414
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN 317
+ V S++ A ++ L +H +VK + +G L+ Y G +CA + F+
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 318 EIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI--TPDEGVFTAVLSACSHSGLV 375
E+P++ L SW +++G+ G + + + M+ + P+E F +++SAC + G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+EG+ I + + + V + ++ G+ G L + +++ +K N W ++
Sbjct: 151 EEGRCI-HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMIV 208
Query: 436 ACRLHRNVKLAE 447
+H LAE
Sbjct: 209 ---IHLQNGLAE 217
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/732 (31%), Positives = 364/732 (49%), Gaps = 110/732 (15%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FD++ ++ WN ++ + + +++ L+REM G KA + T +L+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIV---MVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + G ++HG V+ GLES+V + NSLI MY + G + +R VF+ M R+L+SW
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 124 NT-----------------------------------MMSGYVKNGEAGDAFVVFDHMRR 148
N+ ++SGY G + DA V M+
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
+GL +++ +LL A + LKLGKA+HGY++RN +L + +V ++IDMY ++
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRN--QLWYDVYVETTLIDMYIKTGYL 276
Query: 209 SGARKLFEGLAVK-----------------------------------DTVSWNSLISGY 233
AR +F+ + K D ++WNSL SGY
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 234 EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR----------------------- 270
G + L++ G+M G P+ V+ ++ CS+
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Query: 271 ------------ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE 318
+S L G VH + ++K + V T+L+ MY G A F
Sbjct: 397 ATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWG 456
Query: 319 IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
I +KSLASW M+ G+ + G+G E I+ F+ ML + PD FT+VLS C +SGLV EG
Sbjct: 457 IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Query: 379 KEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACR 438
+ F M Y + PT H SC+VDLLGR+G LDEA+ I M LKP+ +W A LS+C+
Sbjct: 517 WKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCK 576
Query: 439 LHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSY 498
+HR+++LAEI+ ++L ++P+ + Y+ + N+Y+ RW +
Sbjct: 577 IHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLW 636
Query: 499 SFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKM 558
S+ ++++ VH F+A +H DIY +L L ++KK GY+PDTS + D+ KEK+
Sbjct: 637 SWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKL 696
Query: 559 LWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHH 618
L H+E+LA+ + LI IR+ KN +C D HTV K +S L +REI++++ R HH
Sbjct: 697 LMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHH 756
Query: 619 FRDGICSCGGYW 630
FRDG CSC W
Sbjct: 757 FRDGKCSCNDSW 768
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 74/410 (18%)
Query: 68 LLREMGIRVHGLVVVDGLE-SDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ R +G+ +HG ++ GL+ SD V ++ + Y + +G A +FD+MP RD +WN +
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ +++G A +F M+ SG +TM+ LL C + G+ +HGYV+R
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG- 119
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L +N + NS+I MY + +RK+F + ++ SWNS++S Y K G + L
Sbjct: 120 -LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 247 GQMFIGGAVPDEVTVISVLG-------------------------ACSRISALL------ 275
+M I G PD VT S+L + S IS+LL
Sbjct: 179 DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEP 238
Query: 276 ----LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
LG ++H Y+++ + V T+LI MY G A F+ + K++ +W +V
Sbjct: 239 GHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLV 298
Query: 332 -----------------------------------TGFGIHGKGREAISIFNEMLGKNIT 356
+G+ GK +A+ + +M K +
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
P+ +TA+ S CS +G ++F KM + V P S L+ +LG
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILG 407
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 120/239 (50%), Gaps = 2/239 (0%)
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
LG +HG +++ S+ V+ SM Y C + A KLF+ + +D ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASM-GFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
+ G + +ELF +M GA + T++ +L CS G +H Y+++ G N
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
++ SLI MY+ G + + FN + D++L+SW +++ + G +AI + +EM
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL 411
+ PD + ++LS + GL + + +M + ++P+T+ S L+ + G L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL 241
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 328/582 (56%), Gaps = 13/582 (2%)
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVD-GLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
Y +L AC GI++ L++ + L + + + LI+++ + AR +FD +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 116 PVRDLTS---WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLK 172
L + W M GY +NG DA +V+ M S + ++ L AC DL DL+
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
+G+ +H +V+ ++ ++ V N ++ +Y ARK+F+G++ ++ V+WNSLIS
Sbjct: 254 VGRGIHAQIVKRKEKV--DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 233 YEKCGGAFQVLELFGQM---FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY 289
K ++ LF +M IG + T+ ++L ACSR++ALL G +H+ ++K
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSW---ATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNE 349
+ + SL+ MY CG + R F+ + K LASW +M+ + I+G E I++F
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 350 MLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAG 409
M+ + PD F A+LS CS +GL + G +F +M ++ V P HY+CLVD+LGRAG
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 488
Query: 410 KLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSN 469
K+ EA I+ M KP+ +W +LL++CRLH NV + EI+A++LF ++P+ YV +SN
Sbjct: 489 KIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSN 548
Query: 470 IYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKL-K 528
IYA K W S+ ++ + F AG ++ D Y K+
Sbjct: 549 IYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWT 608
Query: 529 DLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLR 588
+L E ++K GY P+TS VL+DV+ E K + HSERLA ++LI+TG G IRITKNLR
Sbjct: 609 ELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLR 668
Query: 589 VCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
VC DCH+ MK+VS++ R I++RD RFHHF DGICSC YW
Sbjct: 669 VCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 164/342 (47%), Gaps = 14/342 (4%)
Query: 4 AQLIFDQIV---FKNSFLWNSMIRGYACSAGGNSSSR-SLVLYREMLSFGQKADNFTYPF 59
A+ IFD + +W +M GY+ N S R +L++Y +ML + NF+
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYS----RNGSPRDALIVYVDMLCSFIEPGNFSISV 241
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
LKAC DL +G +H +V + D V N L+ +Y++ G AR VFD M R+
Sbjct: 242 ALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERN 301
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ +WN+++S K + F +F M+ + T+ +L AC + L GK +H
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 361
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
++++ + + + NS++DMY C + +R++F+ + KD SWN +++ Y G
Sbjct: 362 QILKSKEK--PDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNI 419
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--T 297
+V+ LF M G PD +T +++L CS G S+ + K + ++ A+
Sbjct: 420 EEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYA 478
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGFGIHG 338
L+ + G A + +P K AS W ++ +HG
Sbjct: 479 CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 23/264 (8%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYR----EMLSFGQKADNFTYPF 59
A+ +FD + +N WNS+I + + L+R EM+ F T
Sbjct: 290 ARKVFDGMSERNVVTWNSLI---SVLSKKVRVHEMFNLFRKMQEEMIGFSWA----TLTT 342
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+L AC + G +H ++ + DV + NSL+ MY K G++ +R VFD M +D
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
L SWN M++ Y NG + +F+ M SG+ DG T +ALLS C D + G ++
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE 462
Query: 180 YVVRNSGRLSNNEFVTNSMIDMY-CNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
+ EF + ++ Y C D + A K+ E + V +T+ + S + G
Sbjct: 463 RM--------KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW---GS 511
Query: 239 AFQVLELFGQMFIGGAVPDEVTVI 262
L G + +G E+ V+
Sbjct: 512 LLNSCRLHGNVSVGEIAAKELFVL 535
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/628 (35%), Positives = 332/628 (52%), Gaps = 16/628 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGY----ACSAGGNSSSRSLVLYREMLSFGQKADNFTYPF 59
A+L+FD++ ++ WN+MI GY C G L L+ M D T
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEG-------LELFFAMRGLSVDPDLMTLTS 302
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
V+ AC L R +G +H V+ G D+ V NSL MYL G A +F +M +D
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ SW TM+SGY N A + M + + D T+ A+LSAC L DL G +H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
++ RL + V N++I+MY C I A +F + K+ +SW S+I+G
Sbjct: 423 LAIK--ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
F+ L QM + P+ +T+ + L AC+RI AL+ G +H+++++ G G++ + +L
Sbjct: 481 FEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ MY CG A FN K + SW +++TG+ G+G + +F+ M+ + PDE
Sbjct: 540 LDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F ++L CS S +V +G F KM DY V P HY+C+VDLLGRAG+L EA+ I
Sbjct: 599 ITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
M + P+ VW ALL+ACR+H + L E+SAQ +FE+D V Y+ L N+YA +W
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWRE 717
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
S+ E+ VH F + D H Q+ +I L+ E++ +VG
Sbjct: 718 VAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGL 777
Query: 540 MPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKM 599
+ S D ++++ HSER A+AF LINT PG I +TKNL +C +CH +K
Sbjct: 778 TKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKF 837
Query: 600 VSKLMSREIIMRDICRFHHFRDGICSCG 627
+SK + REI +RD FHHF+DG CSCG
Sbjct: 838 ISKTVRREISVRDAEHFHHFKDGECSCG 865
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 231/435 (53%), Gaps = 14/435 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLK 62
A +F ++ +N F WN ++ GYA + ++ LY ML G K D +T+P VL+
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDE---AMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
CG + G VH VV G E D+ V N+LI+MY+K GD+ +ARL+FD+MP RD+ S
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN M+SGY +NG + +F MR + D T+ +++SAC L D +LG+ +H YV+
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ + V NS+ MY N A KLF + KD VSW ++ISGYE +
Sbjct: 325 TTG--FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
++ + M PDE+TV +VL AC+ + L G +H +K V +LI+M
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y+ C A F+ IP K++ SWT ++ G ++ + EA+ IF + + P+
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITL 501
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
TA L+AC+ G + GKEI + R V + L+D+ R G+++ A++ ++ K
Sbjct: 502 TAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK 560
Query: 423 LKPNEDV--WTALLS 435
+DV W LL+
Sbjct: 561 ----KDVTSWNILLT 571
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 218/424 (51%), Gaps = 6/424 (1%)
Query: 38 SLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLIS 97
++ L M D + +++ C +E G +V+ + + V +GN+ ++
Sbjct: 78 AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137
Query: 98 MYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG-DGT 156
M+++FG++ A VF KM R+L SWN ++ GY K G +A ++ M G V D
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 157 TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
T +L CG + DL GK VH +VVR L + V N++I MY C + AR LF+
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID--VVNALITMYVKCGDVKSARLLFD 255
Query: 217 GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
+ +D +SWN++ISGY + G + LELF M PD +T+ SV+ AC + L
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
G +H+Y++ G+ ++ +V SL MY N GS+ A + F+ + K + SWT M++G+
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
+ +AI + M ++ PDE AVLSAC+ G +D G E+ +K+ +
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-HKLAIKARLISYVI 434
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKL-FE 455
+ L+++ + +D+A N+ K N WT++++ RL+ A I +++
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Query: 456 MDPN 459
+ PN
Sbjct: 494 LQPN 497
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 162/338 (47%), Gaps = 8/338 (2%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +F ++ K+ W +MI GY + +++ YR M K D T VL
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNF---LPDKAIDTYRMMDQDSVKPDEITVAAVLS 406
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC L + G+ +H L + L S V V N+LI+MY K + A +F +P +++ S
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W ++++G N +A + M+ + L + T+ A L+AC + L GK +H +V+
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
R L ++F+ N+++DMY C ++ A F KD SWN L++GY + G V
Sbjct: 526 RTGVGL--DDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMV 582
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ELF +M PDE+T IS+L CS+ + G S + G N ++ +
Sbjct: 583 VELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDL 642
Query: 303 YANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHGK 339
G AH+ ++P A W ++ IH K
Sbjct: 643 LGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK 680
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 327/593 (55%), Gaps = 43/593 (7%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+H +V G+ + N+L+++Y K G A VFD+MP RD +W ++++ +
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 136 AGDAFVVFDHMRRSG-LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+G VF + S L D AL+ AC +L + G+ VH + + +N+E V
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI--VSEYANDEVV 142
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM----- 249
+S++DMY C ++ A+ +F+ + VK+T+SW +++SGY K G + LELF +
Sbjct: 143 KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL 202
Query: 250 -----FIGGAVP----------------------DEVTVISVLGACSRISALLLGSSVHS 282
I G V D + + S++GAC+ ++A + G VH
Sbjct: 203 YSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG 262
Query: 283 YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGRE 342
++ G+ + +LI MYA C + A F+ + + + SWT ++ G HG+ +
Sbjct: 263 LVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEK 322
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
A++++++M+ + P+E F ++ ACSH G V++G+E+F MT+DY + P+ HY+CL+
Sbjct: 323 ALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL 382
Query: 403 DLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC----RLHRNVKLAEISAQKLFEMDP 458
DLLGR+G LDEA I M P+E W ALLSAC R +++A+ DP
Sbjct: 383 DLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP 442
Query: 459 NKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQ 518
S Y+ LSNIYA+ W P +S E+ K F+AG+TSH
Sbjct: 443 ---STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHP 499
Query: 519 QSDDIYAKLKDLNEQLK-KVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGP 577
+DI+ LK L E+++ + GY+PDTS +L+D++ + KEK+L+ HSER A+A+ L+ P
Sbjct: 500 LKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVP 559
Query: 578 GTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
GT IRI KNLRVC DCH V+K +S++ REII+RD R+HHF+ G CSC +W
Sbjct: 560 GTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 206/460 (44%), Gaps = 75/460 (16%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVL 61
A +FD++ ++ W S++ N S ++L ++ + S + D+F + ++
Sbjct: 56 HALQVFDEMPHRDHIAWASVLTALN---QANLSGKTLSVFSSVGSSSGLRPDDFVFSALV 112
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
KAC +L + G +VH +V +D V +SL+ MY K G + +A+ VFD + V++
Sbjct: 113 KACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTI 172
Query: 122 SWNTMMSGY-------------------------------VKNGEAGDAFVVFDHMRRSG 150
SW M+SGY V++G+ +AF VF MRR
Sbjct: 173 SWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
Query: 151 L-VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
+ + D + +++ AC +L G+ VHG V+ + + F++N++IDMY C +
Sbjct: 233 VDILDPLVLSSIVGACANLAASIAGRQVHGLVI--ALGFDSCVFISNALIDMYAKCSDVI 290
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A+ +F + +D VSW SLI G + G A + L L+ M G P+EVT + ++ ACS
Sbjct: 291 AAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS 350
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
+ + G + + K YG+ SL +T
Sbjct: 351 HVGFVEKGRELFQSMTKD-YGIRP-----------------------------SLQHYTC 380
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDY 389
++ G G EA ++ + M PDE + A+LSAC G G I + +
Sbjct: 381 LLDLLGRSGLLDEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSF 437
Query: 390 NVEPTTTHYSCLVDLLGRA---GKLDEAYATIDNMKLKPN 426
++ +T Y L ++ A GK+ EA + M+++ +
Sbjct: 438 KLKDPST-YILLSNIYASASLWGKVSEARRKLGEMEVRKD 476
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 5/173 (2%)
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L C+R L ++H+++VK G + +L+++Y CG+ A + F+E+P +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 325 ASWTVMVTGFG-IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF- 382
+W ++T + G+ + + PD+ VF+A++ AC++ G +D G+++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 383 YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ + +Y + S LVD+ + G L+ A A D++++K N WTA++S
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVS 179
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 322/594 (54%), Gaps = 41/594 (6%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGD-------MGTARLVFDKMPVRDLTSWNTMMS 128
+HG ++ L SDV+V + L+++ + +G A +F ++ +L +N ++
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 129 GYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRL 188
+ E AF + M +S + D T L+ A ++ + +G+ H +VR
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG--F 148
Query: 189 SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQ 248
N+ +V NS++ MY NC FI+ A ++F + +D VSW S+++GY KCG E+F +
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 249 M-----------------------------FIG--GAVPDEVTVISVLGACSRISALLLG 277
M F+ G V +E ++SV+ +C+ + AL G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
+ Y+VK +N +GT+L+ M+ CG A F +P+ SW+ ++ G +H
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH 397
G +A+ F++M+ P + FTAVLSACSH GLV++G EI+ M +D+ +EP H
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMD 457
Y C+VD+LGRAGKL EA I M +KPN + ALL AC++++N ++AE L ++
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 458 PNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAG-DTS 516
P YV LSNIYA +W PP +S E++ +++F G D
Sbjct: 449 PEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK 508
Query: 517 HQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTG 576
H + I K +++ +++ +GY +T +DV+ E KE + HSE+LA+A+ ++ T
Sbjct: 509 HPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTK 568
Query: 577 PGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
PGTTIRI KNLRVC DCHTV K++S++ RE+I+RD RFHHFR+G+CSC YW
Sbjct: 569 PGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 214/450 (47%), Gaps = 73/450 (16%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
IF QI N F++N +IR C + G S++ Y +ML DN T+PF++KA +
Sbjct: 73 IFSQIQNPNLFVFNLLIR---CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLK----------FGDMG---------- 106
+ +G + H +V G ++DVYV NSL+ MY FG MG
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 107 -----------TARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDG 155
AR +FD+MP R+L +W+ M++GY KN A +F+ M+R G+V +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
T M++++S+C L L+ G+ + YVV++ ++ N + +++DM+ C I A +F
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKS--HMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
EGL D++SW+S+I G G A + + F QM G +P +VT +VL ACS
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS------ 361
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFG 335
H LV+KG + +Y N + + L + +V G
Sbjct: 362 -----HGGLVEKG-----------LEIYENMKK--------DHGIEPRLEHYGCIVDMLG 397
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
GK EA N +L ++ P+ + A+L AC + + + + + V+P
Sbjct: 398 RAGKLAEAE---NFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK---VKPEH 451
Query: 396 T-HYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+ +Y L ++ AG+ D+ + D MK K
Sbjct: 452 SGYYVLLSNIYACAGQWDKIESLRDMMKEK 481
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 49/322 (15%)
Query: 159 LALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN-------CDFISGA 211
LALL +C DLK+ +HG+++R L ++ FV + ++ + + + + A
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRT--HLISDVFVASRLLALCVDDSTFNKPTNLLGYA 70
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
+F + + +N LI + + + QM PD +T ++ A S +
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR----------------- 314
+L+G HS +V+ G+ + V SL+ MYANCG A R
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 315 --------------AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
F+E+P ++L +W++M+ G+ + +AI +F M + + +E
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
V +V+S+C+H G ++ G+ + + + + + + LVD+ R G +++A +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 421 MKLKPNED--VWTALLSACRLH 440
+ P D W++++ +H
Sbjct: 310 L---PETDSLSWSSIIKGLAVH 328
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 4/249 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
A+ +FD++ +N F W+ MI GY A N +++ L+ M G A+ V+
Sbjct: 201 NAREMFDEMPHRNLFTWSIMINGY---AKNNCFEKAIDLFEFMKREGVVANETVMVSVIS 257
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
+C L E G R + VV + ++ +G +L+ M+ + GD+ A VF+ +P D S
Sbjct: 258 SCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W++++ G +G A A F M G + T A+LSAC ++ G ++ +
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
++ G E ++DM ++ A + VK + G K +V
Sbjct: 378 KDHGIEPRLEHY-GCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEV 436
Query: 243 LELFGQMFI 251
E G M I
Sbjct: 437 AERVGNMLI 445
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/464 (42%), Positives = 284/464 (61%), Gaps = 2/464 (0%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
+N WN+++ GY+ S S L+LY M D+F F +KAC L L E G
Sbjct: 70 RNRHSWNTILSGYSKSKTC-CYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
I +HGL + +GL+ D YV SL+ MY + G M +A+ VFD++PVR+ W +M GY+K
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 134 GEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
+ + F +F MR +GL D T++ L+ ACG++ K+GK VHG +R S + +++
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF-IDQSDY 247
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
+ S+IDMY C + ARKLFE ++ V W +LISG+ KC A + +LF QM
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
+P++ T+ ++L +CS + +L G SVH Y+++ G M+ TS I MYA CG+ A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
F+ +P++++ SW+ M+ FGI+G EA+ F++M +N+ P+ F ++LSACSHSG
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTAL 433
V EG + F MTRDY V P HY+C+VDLLGRAG++ EA + IDNM +KP W AL
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 434 LSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
LSACR+H+ V LA A+KL M+P K S YV LSNIYA W
Sbjct: 488 LSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMW 531
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 192/369 (52%), Gaps = 13/369 (3%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV--RDLTSWNTMMSGYVK 132
+VH V++ G E +V +G+SL + Y++ + A F+++P R+ SWNT++SGY K
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 133 NGEA--GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSN 190
+ D ++++ MRR D ++ + AC L L+ G +HG ++N L
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG--LDK 142
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
+++V S+++MY + A+K+F+ + V+++V W L+ GY K +V LF M
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR 202
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY-GMNTAVGTSLISMYANCGSF 309
G D +T+I ++ AC + A +G VH +++ + + + S+I MY C
Sbjct: 203 DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLL 262
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
A + F D+++ WT +++GF + EA +F +ML ++I P++ A+L +C
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
S G + GK + M R+ +E +++ +D+ R G + A D M P +V
Sbjct: 323 SSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMM---PERNV 378
Query: 430 --WTALLSA 436
W+++++A
Sbjct: 379 ISWSSMINA 387
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 199/412 (48%), Gaps = 45/412 (10%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M AQ +FD+I +NS LW +++GY + R L R+ G D T +
Sbjct: 160 MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDT---GLALDALTLICL 216
Query: 61 LKACGDLLLREMGIRVHGLVVVDGL--ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+KACG++ ++G VHG+ + +SD Y+ S+I MY+K + AR +F+ R
Sbjct: 217 VKACGNVFAGKVGKCVHGVSIRRSFIDQSD-YLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
++ W T++SG+ K A +AF +F M R ++ + T+ A+L +C L L+ GK+VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
GY++RN + F S IDMY C I AR +F+ + ++ +SW+S+I+ + G
Sbjct: 336 GYMIRNGIEMDAVNF--TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ L+ F +M VP+ VT +S+L ACS HS VK+G+
Sbjct: 394 FEEALDCFHKMKSQNVVPNSVTFVSLLSACS-----------HSGNVKEGW--------- 433
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
F R + +P++ + MV G G+ EA S + M + P
Sbjct: 434 --------KQFESMTRDYGVVPEEE--HYACMVDLLGRAGEIGEAKSFIDNM---PVKPM 480
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH-YSCLVDLLGRAG 409
+ A+LSAC VD EI K+ ++EP + Y L ++ AG
Sbjct: 481 ASAWGALLSACRIHKEVDLAGEIAEKL---LSMEPEKSSVYVLLSNIYADAG 529
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 305/527 (57%), Gaps = 3/527 (0%)
Query: 105 MGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
M AR +F+ M D+ +N+M GY + + F +F + G++ D T +LL A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 165 CGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTV 224
C L+ G+ +H ++ L +N +V ++I+MY C+ + AR +F+ + V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLG--LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 225 SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYL 284
+N++I+GY + + L LF +M P+E+T++SVL +C+ + +L LG +H Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 285 VKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAI 344
K + V T+LI M+A CGS A F ++ K +W+ M+ + HGK +++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 345 SIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDL 404
+F M +N+ PDE F +L+ACSH+G V+EG++ F +M + + P+ HY +VDL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 405 LGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGY 464
L RAG L++AY ID + + P +W LL+AC H N+ LAE ++++FE+D + Y
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 465 VCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIY 524
V LSN+YA K+W P S E+N +VH+FF+GD + ++
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLH 496
Query: 525 AKLKDLNEQLKKVGYMPDTSSVLY-DVEAEVKEKMLWDHSERLALAFALINTGPGTTIRI 583
L ++ ++LK GY+PDTS V++ ++ + KE L HSE+LA+ F L+NT PGTTIR+
Sbjct: 497 RALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRV 556
Query: 584 TKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
KNLRVC DCH K++S + R++++RD+ RFHHF DG CSCG +W
Sbjct: 557 VKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 176/341 (51%), Gaps = 9/341 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +F+ + + ++NSM RGY+ + L+ E+L G DN+T+P +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYS---RFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LKAC E G ++H L + GL+ +VYV +LI+MY + D+ +AR VFD++ +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+N M++GY + +A +F M+ L + T+L++LS+C L L LGK +H Y
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
++S V ++IDM+ C + A +FE + KDT +W+++I Y G A
Sbjct: 256 AKKHS--FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT--S 298
+ + +F +M PDE+T + +L ACS + G S +V K +G+ ++ S
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK-FGIVPSIKHYGS 372
Query: 299 LISMYANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHG 338
++ + + G+ A+ +++P + W +++ H
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/633 (34%), Positives = 334/633 (52%), Gaps = 47/633 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFG-QKADNFTYPF 59
+P A+ + ++F++N+++RGY+ S + S+ ++ EM+ G D+F++ F
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSES---DEPHNSVAVFVEMMRKGFVFPDSFSFAF 111
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
V+KA + G ++H + GLES ++VG +LI MY G + AR VFD+M +
Sbjct: 112 VIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN 171
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
L +WN +++ + + A +FD M
Sbjct: 172 LVAWNAVITACFRGNDVAGAREIFDKM--------------------------------- 198
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
L N N M+ Y + A+++F + +D VSW+++I G G
Sbjct: 199 --------LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ F ++ G P+EV++ VL ACS+ + G +H ++ K GY +V +L
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 300 ISMYANCGSFLCAHRAFNEIPDKS-LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
I MY+ CG+ A F + +K + SWT M+ G +HG+G EA+ +FNEM +TPD
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
F ++L ACSH+GL++EG++ F +M R Y++EP HY C+VDL GR+GKL +AY I
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
M + P VW LL AC H N++LAE Q+L E+DPN V LSN YA +W
Sbjct: 431 CQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWK 490
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK-KV 537
++S E+ K +++F AG+ + + KLK++ +LK +
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEA 550
Query: 538 GYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVM 597
GY P+ +S LYDVE E KE + HSE+LALAFAL G IRI KNLR+C DCH VM
Sbjct: 551 GYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVM 610
Query: 598 KMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
K+ SK+ EI++RD RFH F+DG CSC YW
Sbjct: 611 KLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 22/286 (7%)
Query: 159 LALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN---CDFISGARKLF 215
L+LL++C +L L +HG ++ + + + T +I ++C D + AR+L
Sbjct: 9 LSLLNSCKNLRALT---QIHGLFIKYG--VDTDSYFTGKLI-LHCAISISDALPYARRLL 62
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISAL 274
D +N+L+ GY + + +F +M G V PD + V+ A +L
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 275 LLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF 334
G +H +K G + VGT+LI MY CG A + F+E+ +L +W ++T
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
A IF++ML +N T + +L+ +G ++ K IF +M +V
Sbjct: 183 FRGNDVAGAREIFDKMLVRNHTS----WNVMLAGYIKAGELESAKRIFSEMPHRDDVS-- 236
Query: 395 TTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSAC 437
+S ++ + G +E++ ++ + PNE T +LSAC
Sbjct: 237 ---WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/664 (33%), Positives = 347/664 (52%), Gaps = 55/664 (8%)
Query: 1 MPQ-AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSR--SLVLYREMLSFGQKADNFTY 57
MP+ A+ +FD++ +N WN ++ GY + + + + L+ R ++S+ + +
Sbjct: 63 MPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVH 122
Query: 58 PFVLKACGDLLLR-EMGIRVHGLVVVDGL-----------------ESDVYVGNSLISMY 99
+ L + +V V++ G + D S+I
Sbjct: 123 NGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL 182
Query: 100 LKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML 159
K G + AR +FD+M R + +W TM++GY +N DA +FD M V T+ML
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSML 241
Query: 160 ALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE-----------FVTNSMIDMYCNCDFI 208
GYV +GR+ + E N+MI I
Sbjct: 242 M------------------GYV--QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEI 281
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
+ AR++F+ + ++ SW ++I +E+ G + L+LF M G P T+IS+L C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 269 SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT 328
+ +++L G VH+ LV+ + ++ V + L++MY CG + + F+ P K + W
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 329 VMVTGFGIHGKGREAISIFNEM-LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
+++G+ HG G EA+ +F EM L + P+E F A LSACS++G+V+EG +I+ M
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
+ V+P T HY+C+VD+LGRAG+ +EA ID+M ++P+ VW +LL ACR H + +AE
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAE 521
Query: 448 ISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMV 507
A+KL E++P Y+ LSN+YA++ RW P S+ E+ V
Sbjct: 522 FCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKV 581
Query: 508 HQFFAGD-TSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERL 566
H F G SH + + I L +L+ L++ GY PD S L+DV+ E K L HSERL
Sbjct: 582 HAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERL 641
Query: 567 ALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSC 626
A+A+AL+ G IR+ KNLRVC DCHT +K++SK+ REII+RD RFHHFR+G CSC
Sbjct: 642 AVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSC 701
Query: 627 GGYW 630
YW
Sbjct: 702 KDYW 705
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 59/343 (17%)
Query: 92 GNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL 151
N I+ + G + AR +FD + ++SWN+M++GY N DA +FD M +
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
+ + +G V SG + N E I A
Sbjct: 80 I-----------------------SWNGLV---SGYMKNGE---------------IDEA 98
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
RK+F+ + ++ VSW +L+ GY G LF +M V V +I L RI
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD-GRI 157
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
++ + K + TS+I G A F+E+ ++S+ +WT MV
Sbjct: 158 DD---ACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
TG+G + + +A IF+ M K E +T++L +G +++ +E+F M V
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMP----V 262
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
+P + ++ LG+ G++ +A D+MK + N+ W ++
Sbjct: 263 KPVIA-CNAMISGLGQKGEIAKARRVFDSMKER-NDASWQTVI 303
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/636 (34%), Positives = 340/636 (53%), Gaps = 16/636 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD+I ++ +N++I GYA + ++VL++ M G + D FT ++ A
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYA---DARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM-PVRDLTS 122
C D + ++ ++H V G +S V N+ ++ Y K G + A VF M +RD S
Sbjct: 150 CCDRV--DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN+M+ Y ++ E A ++ M G D T+ ++L+A L L G+ HG ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 183 RNSGRLSNNEFVTNSMIDMYCNC---DFISGARKLFEGLAVKDTVSWNSLISGYEKCGG- 238
+ N V + +ID Y C D + + K+F+ + D V WN++ISGY
Sbjct: 268 KAG--FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN-TAVGT 297
+ + ++ F QM G PD+ + + V ACS +S+ +H +K N +V
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+LIS+Y G+ A F+ +P+ + S+ M+ G+ HG G EA+ ++ ML I P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
++ F AVLSAC+H G VDEG+E F M + +EP HYSC++DLLGRAGKL+EA
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
ID M KP W ALL ACR H+N+ LAE +A +L M P + YV L+N+YA ++W
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKW 565
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
P S+ E+ K H F A D SH ++ L+++ +++KKV
Sbjct: 566 EEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKV 625
Query: 538 GYMPDTSSVLYDVEAEVKEKM---LWDHSERLALAFALINTGPGTTIRITKNLRVCVDCH 594
GY+ D + + + L HSE+LA+AF L++T G + + KNLR+C DCH
Sbjct: 626 GYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCH 685
Query: 595 TVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+K +S + REII+RD RFH F+DG CSCG YW
Sbjct: 686 NAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 188/390 (48%), Gaps = 12/390 (3%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
E +V+ N ++ Y K + AR +FD++P D S+NT++SGY E A V+F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
MR+ G DG T+ L++AC D +DL K +H + V SG + V N+ + Y
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSV--SGGFDSYSSVNNAFVTYYSKG 186
Query: 206 DFISGARKLFEGL-AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
+ A +F G+ ++D VSWNS+I Y + + L L+ +M G D T+ SV
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG---SFLCAHRAFNEIPD 321
L A + + L+ G H L+K G+ N+ VG+ LI Y+ CG + + F EI
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 322 KSLASWTVMVTGFGIHGK-GREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKE 380
L W M++G+ ++ + EA+ F +M PD+ F V SACS+ + K+
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 381 IFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
I + + + + L+ L ++G L +A D M + N + ++ H
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQH 425
Query: 441 RNVKLAEISAQKLFE--MDPNKVSGYVCLS 468
+ A + Q++ + + PNK++ LS
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 5/237 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M ++ +F +I+ + +WN+MI GY S S ++ +R+M G + D+ ++ V
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGY--SMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESD-VYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
AC +L ++HGL + + S+ + V N+LIS+Y K G++ AR VFD+MP +
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELN 411
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
S+N M+ GY ++G +A +++ M SG+ + T +A+LSAC + G+
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD-TVSWNSLISGYEK 235
++ + ++ + MID+ + A + + + K +V+W +L+ K
Sbjct: 472 -TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK 527
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/663 (33%), Positives = 341/663 (51%), Gaps = 59/663 (8%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +FD++ +N WN ++ GY +R +V R + + + ++ ++K
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYI-------KNRMIVEARNVFELMPERNVVSWTAMVK 118
Query: 63 AC--------GDLLLREMGIR--VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF 112
+ L M R V V+ GL D G + AR ++
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD--------------GRIDKARKLY 164
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLA------------ 160
D MPV+D+ + M+ G + G +A ++FD MR +V TTM+
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV-TWTTMITGYRQNNRVDVAR 223
Query: 161 -LLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE-----------FVTNSMIDMYCNCDFI 208
L + ++ + GY + SGR+ + E N+MI + I
Sbjct: 224 KLFEVMPEKTEVSWTSMLLGYTL--SGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEI 281
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
S AR++F+ + +D +W +I YE+ G + L+LF QM G P ++IS+L C
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Query: 269 SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT 328
+ +++L G VH++LV+ + + V + L++MY CG + A F+ K + W
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWN 401
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
+++G+ HG G EA+ IF+EM P++ A+L+ACS++G ++EG EIF M
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEI 448
+ V PT HYSC VD+LGRAG++D+A I++M +KP+ VW ALL AC+ H + LAE+
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEV 521
Query: 449 SAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVH 508
+A+KLFE +P+ YV LS+I A+ +W P S+ E+ K VH
Sbjct: 522 AAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVH 581
Query: 509 QFFAGD-TSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLA 567
F G +H + I L+ + L++ GY PD S VL+DV+ E K L HSERLA
Sbjct: 582 MFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLA 641
Query: 568 LAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCG 627
+A+ L+ G IR+ KNLRVC DCH +K++SK+ REII+RD RFHHF +G CSC
Sbjct: 642 VAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCR 701
Query: 628 GYW 630
YW
Sbjct: 702 DYW 704
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 172/402 (42%), Gaps = 51/402 (12%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR----- 147
NS++S Y G AR +FD+M R++ SWN ++SGY+KN +A VF+ M
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 148 ----------RSGLVGDGTTMLALLSACGDL-MDLKLGKAVHGYVVRNSGRLSN-----N 191
+ G+VG+ ++ + ++ + G + + + +L + +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
+ +MI C + AR +F+ + ++ V+W ++I+GY + +LF M
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM-- 229
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK-----KGYGMNTAVG-TSLISMYAN 305
P++ V +++LLG ++ + + M + ++I +
Sbjct: 230 ----PEKTEV--------SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGE 277
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
G A R F+ + D+ A+W M+ + G EA+ +F +M + + P ++
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
LS C+ + G+++ + R + S L+ + + G+L +A D K
Sbjct: 338 LSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK- 395
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFEMD-----PNKVS 462
+ +W +++S H L E + + EM PNKV+
Sbjct: 396 DIIMWNSIISGYASH---GLGEEALKIFHEMPSSGTMPNKVT 434
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 59/341 (17%)
Query: 96 ISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDG 155
IS + G + AR FD + + + SWN+++SGY NG +A +FD M +V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS-- 81
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
N ++ Y I AR +F
Sbjct: 82 ---------------------------------------WNGLVSGYIKNRMIVEARNVF 102
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
E + ++ VSW +++ GY + G + LF +M +EV+ + G +
Sbjct: 103 ELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRID 158
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFG 335
++ + K + T++I G A F+E+ ++++ +WT M+TG+
Sbjct: 159 KARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
+ + A +F M K E +T++L + SG +++ +E F M ++P
Sbjct: 215 QNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVI 266
Query: 396 THYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
+ +V G G++ +A D M+ + N W ++ A
Sbjct: 267 ACNAMIVG-FGEVGEISKARRVFDLMEDRDNA-TWRGMIKA 305
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 322/608 (52%), Gaps = 54/608 (8%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMY----LKFGDMGTARLVFDKMPVRDLTSWNTMMSGY 130
++H + + G D ++ L D+ A +F++MP R+ SWNT++ G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 131 VKNGE--AGDAFVVFDHMRRSGLVGDGT-TMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
++ E A A +F M V T ++L AC ++ GK +HG ++
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG-- 158
Query: 188 LSNNEFVTNSMIDMYCNCDFIS-------------------------------------- 209
+EFV ++++ MY C F+
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 210 -------GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVI 262
AR LF+ + + VSWN++ISGY G +E+F +M G P+ VT++
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 263 SVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK 322
SVL A SR+ +L LG +H Y G ++ +G++LI MY+ CG A F +P +
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 323 SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF 382
++ +W+ M+ GF IHG+ +AI F +M + P + + +L+ACSH GLV+EG+ F
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 383 YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRN 442
+M +EP HY C+VDLLGR+G LDEA I NM +KP++ +W ALL ACR+ N
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 443 VKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFE 502
V++ + A L +M P+ YV LSN+YA++ W P S +
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 503 LNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDH 562
++ ++H+F D SH ++ +I + L +++++L+ GY P T+ VL ++E E KE +L H
Sbjct: 519 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYH 578
Query: 563 SERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDG 622
SE++A AF LI+T PG IRI KNLR+C DCH+ +K++SK+ R+I +RD RFHHF+DG
Sbjct: 579 SEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDG 638
Query: 623 ICSCGGYW 630
CSC YW
Sbjct: 639 SCSCMDYW 646
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 197/429 (45%), Gaps = 92/429 (21%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFG-QKADNFTYPFVLK 62
A IF+Q+ +N F WN++IRG++ + + + ++ L+ EM+S + + FT+P VLK
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFS-ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMY----------------------- 99
AC + G ++HGL + G D +V ++L+ MY
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 100 ----------------------LKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAG 137
++ GD AR++FDKM R + SWNTM+SGY NG
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 138 DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNS 197
DA VF M++ + + T++++L A L L+LG+ +H Y + R+ ++ + ++
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI--DDVLGSA 314
Query: 198 MIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPD 257
+IDMY C I A +FE L ++ ++W+++I+G+ G A ++ F +M G P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN 317
+V I++L ACS H LV++G R F+
Sbjct: 375 DVAYINLLTACS-----------HGGLVEEG------------------------RRYFS 399
Query: 318 EIP-----DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
++ + + + MV G G EA +L I PD+ ++ A+L AC
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKALLGACRMQ 456
Query: 373 GLVDEGKEI 381
G V+ GK +
Sbjct: 457 GNVEMGKRV 465
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 333/617 (53%), Gaps = 49/617 (7%)
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLES--DVYVGNSLISMYLKFGDMGTARLVFDKMP 116
+L+ C G +H ++ GL+ Y+ N+L Y G+M TA+ +FD++P
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 117 V--RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLG 174
+ +D W T++S + + G ++ +F MRR + D +++ L C L DL
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS--------- 225
+ HG V+ G L++ + V N+++DMY C +S +++FE L K VS
Sbjct: 131 QQGHGVAVK-MGVLTSVK-VCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 226 ----------------------WNSLISGYEKCGGAFQVLELFGQM-FIGGAVPDEVTVI 262
W +++GY G +VLEL +M F G + VT+
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 263 SVLGACSRISALLLGSSVHSYLVKKGYGM-------NTAVGTSLISMYANCGSFLCAHRA 315
S+L AC++ L++G VH Y +KK M + VGT+L+ MYA CG+ +
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 316 FNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLV 375
F + +++ +W + +G +HGKGR I +F +M+ + + PD+ FTAVLSACSHSG+V
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIV 367
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
DEG F+ + R Y +EP HY+C+VDLLGRAG ++EA + M + PNE V +LL
Sbjct: 368 DEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 436 ACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXP 495
+C +H V++AE ++L +M P + +SN+Y AE R
Sbjct: 427 SCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKI 486
Query: 496 PSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEA--E 553
P S +N VH+F +GD SH ++ +IY KL ++ E+++ GY+PD S ++ E E
Sbjct: 487 PGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLE 546
Query: 554 VKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDI 613
KE+ L HSE+LA+ F L+ T P T + + KNLR+C DCH+ MK+VSK+ REII+RD
Sbjct: 547 EKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDR 606
Query: 614 CRFHHFRDGICSCGGYW 630
RFH F+ G CSC YW
Sbjct: 607 NRFHQFKGGSCSCSDYW 623
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNF-TYPF 59
+ + + +F ++ +N+ W M+ GY G + L L EM+ NF T
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYL---GAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 60 VLKAC---GDLLL-REMGIRVHGLVVVDGLES---DVYVGNSLISMYLKFGDMGTARLVF 112
+L AC G+L++ R + + ++ G E+ DV VG +L+ MY K G++ ++ VF
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
M R++ +WN + SG +G+ +F M R + D T A+LSAC
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSAC 361
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/626 (34%), Positives = 318/626 (50%), Gaps = 81/626 (12%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F Q + + FL+ + I + + + ++ +LY ++LS + FT+ +LK+C
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKD---QAFLLYVQLLSSEINPNEFTFSSLLKSCST 142
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ G +H V+ GL D YV L+ +
Sbjct: 143 ----KSGKLIHTHVLKFGLGIDPYVATGLVDV---------------------------- 170
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
Y K G+ A VFD M LV
Sbjct: 171 ---YAKGGDVVSAQKVFDRMPERSLVS--------------------------------- 194
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
+ +MI Y + AR LF+ + +D VSWN +I GY + G L LF
Sbjct: 195 --------STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 247 GQMFI-GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
++ G PDE+TV++ L ACS+I AL G +H ++ +N V T LI MY+
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG-KNITPDEGVFTA 364
CGS A FN+ P K + +W M+ G+ +HG ++A+ +FNEM G + P + F
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
L AC+H+GLV+EG IF M ++Y ++P HY CLV LLGRAG+L AY TI NM +
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 425 PNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXX 484
+ +W+++L +C+LH + L + A+ L ++ YV LSNIYA+ +
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 485 XXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTS 544
P S E+ VH+F AGD H +S +IY L+ ++E++K GY+P+T+
Sbjct: 487 NLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTN 546
Query: 545 SVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLM 604
+VL D+E KE+ L HSERLA+A+ LI+T PG+ ++I KNLRVC DCHTV K++SK+
Sbjct: 547 TVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKIT 606
Query: 605 SREIIMRDICRFHHFRDGICSCGGYW 630
R+I+MRD RFHHF DG CSCG +W
Sbjct: 607 GRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 142/324 (43%), Gaps = 43/324 (13%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLK 62
A+ +FD + ++ WN MI GYA N + L+L++++L+ G+ K D T L
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDA---LMLFQKLLAEGKPKPDEITVVAALS 267
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC + E G +H V + +V V LI MY K G + A LVF+ P +D+ +
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
WN M++GY +G + DA +F+ M+ +GL T + L AC
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA--------------- 372
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
++G ++ + SM Y G + E + L+S + G +
Sbjct: 373 --HAGLVNEGIRIFESMGQEY-------GIKPKIE--------HYGCLVSLLGRAGQLKR 415
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM-NTAVGTSLI 300
E M + D V SVLG+C +LG + YL+ G + N+ + L
Sbjct: 416 AYETIKNMNMDA---DSVLWSSVLGSCKLHGDFVLGKEIAEYLI--GLNIKNSGIYVLLS 470
Query: 301 SMYANCGSFLCAHRAFNEIPDKSL 324
++YA+ G + + N + +K +
Sbjct: 471 NIYASVGDYEGVAKVRNLMKEKGI 494
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 317/560 (56%), Gaps = 7/560 (1%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
+VH ++V G + LI++ + L+F +P+ D +N+++ K
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ M S + T +++ +C DL L++GK VH + V + L + +V
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL--DTYV 144
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
+++ Y C + GAR++F+ + K V+WNSL+SG+E+ G A + +++F QM G
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
PD T +S+L AC++ A+ LGS VH Y++ +G +N +GT+LI++Y+ CG A
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACSHSG 373
F+++ + ++A+WT M++ +G HG G++A+ +FN+M P+ F AVLSAC+H+G
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNED---VW 430
LV+EG+ ++ +MT+ Y + P H+ C+VD+LGRAG LDEAY I + +W
Sbjct: 325 LVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALW 384
Query: 431 TALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXX 490
TA+L AC++HRN L A++L ++P+ +V LSNIYA +
Sbjct: 385 TAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRN 444
Query: 491 XXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDV 550
YS E+ + F GD SHQ++ +IY L+ L + K++GY P + V++ V
Sbjct: 445 NLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQV 504
Query: 551 EAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIM 610
E E KE L HSE+LA+AF L+ T I I KNLR+C DCH+ K +S + +R+I +
Sbjct: 505 EEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITV 563
Query: 611 RDICRFHHFRDGICSCGGYW 630
RD RFHHF++G CSC YW
Sbjct: 564 RDKLRFHHFQNGSCSCLDYW 583
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 200/421 (47%), Gaps = 44/421 (10%)
Query: 5 QLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC 64
L+F + + FL+NS+I+ ++ + YR MLS N+T+ V+K+C
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKS---TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 65 GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWN 124
DL +G VH VV G D YV +L++ Y K GDM AR VFD+MP + + +WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 125 TMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRN 184
+++SG+ +NG A +A VF MR SG D T ++LLSAC + LG VH Y++
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII-- 235
Query: 185 SGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLE 244
S L N + ++I++Y C + AR++F+ + + +W ++IS Y G Q +E
Sbjct: 236 SEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVE 295
Query: 245 LFGQMFIG-GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
LF +M G +P+ VT ++VL AC+ + G SV+ + K
Sbjct: 296 LFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK----------------- 338
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM--LGKNITPDEGV 361
++ IP + MV G G EA +++ GK P +
Sbjct: 339 -----------SYRLIP--GVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP--AL 383
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKLDEAYATIDN 420
+TA+L AC D G EI ++ +EP H+ L ++ +GK DE D
Sbjct: 384 WTAMLGACKMHRNYDLGVEIAKRLI---ALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 421 M 421
M
Sbjct: 441 M 441
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +FD++ K+ WNS++ G+ + ++ ++ +M G + D+ T+ +
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGF---EQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC +G VH ++ +GL+ +V +G +LI++Y + GD+G AR VFDKM ++
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRS-GLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+W M+S Y +G A +F+ M G + + T +A+LSAC ++ G++V+
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGL 218
+ ++ + E M+DM F+ A K L
Sbjct: 335 RMTKSYRLIPGVEHHV-CMVDMLGRAGFLDEAYKFIHQL 372
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 332/579 (57%), Gaps = 6/579 (1%)
Query: 56 TYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
TY +++AC L RV+G ++ +G E + Y+ N ++ M++K G + AR +FD++
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
P R+L S+ +++SG+V G +AF +F M + T +L A L + +GK
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
+H ++ + +N FV+ +IDMY C I AR FE + K TV+WN++I+GY
Sbjct: 245 QLHVCALKLG--VVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G + + L L M G D+ T+ ++ ++++ L L H+ L++ G+
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
T+L+ Y+ G A F+++P K++ SW ++ G+ HG+G +A+ +F +M+ N+
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
P+ F AVLSAC++SGL ++G EIF M+ + ++P HY+C+++LLGR G LDEA
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 416 ATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEK 475
A I LK ++W ALL+ACR+ N++L + A+KL+ M P K+ YV + N+Y +
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 476 RWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDT--SHQQS--DDIYAKLKDLN 531
+ P+ ++ E+ H F +GD S+ ++ IY K+ +L
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELM 602
Query: 532 EQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCV 591
E++ + GY + +L DV+ + +E++ HSE+LA+A+ L+NT ++IT+N R+C
Sbjct: 603 EEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICK 662
Query: 592 DCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+CH V++ +S + RE+++RD RFHHF++G CSCGGYW
Sbjct: 663 NCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 190/427 (44%), Gaps = 52/427 (12%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD+I +N + + S+I G+ + + L++ M + T+ +L+A
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFV---NFGNYVEAFELFKMMWEELSDCETHTFAVMLRA 233
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L +G ++H + G+ + +V LI MY K GD+ AR F+ MP + +W
Sbjct: 234 SAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAW 293
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N +++GY +G + +A + MR SG+ D T+ ++ L L+L K H ++R
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR 353
Query: 184 NSGRLSNNEFVTNS-MIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
N +E V N+ ++D Y + AR +F+ L K+ +SWN+L+ GY G
Sbjct: 354 NG---FESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDA 410
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY----GMNTAVGTS 298
++LF +M P+ VT ++VL AC+ +S L ++G+ M+ G
Sbjct: 411 VKLFEKMIAANVAPNHVTFLAVLSACA-----------YSGLSEQGWEIFLSMSEVHGIK 459
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
+M+ C M+ G G EAI+ K
Sbjct: 460 PRAMHYAC-----------------------MIELLGRDGLLDEAIAFIRRAPLKTTV-- 494
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKLDEAYAT 417
++ A+L+AC ++ G+ + K+ Y + P +Y + ++ GK EA
Sbjct: 495 -NMWAALLNACRMQENLELGRVVAEKL---YGMGPEKLGNYVVMYNMYNSMGKTAEAAGV 550
Query: 418 IDNMKLK 424
++ ++ K
Sbjct: 551 LETLESK 557
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 160/339 (47%), Gaps = 17/339 (5%)
Query: 138 DAFVVFD--HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
+AF +F+ +R S VG +T AL+ AC L ++ K V+G+++ N +++
Sbjct: 105 EAFELFEILEIRCSFKVG-VSTYDALVEACIRLKSIRCVKRVYGFMMSNG--FEPEQYMM 161
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
N ++ M+ C I AR+LF+ + ++ S+ S+ISG+ G + ELF M+ +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
+ T +L A + + ++ +G +H +K G NT V LI MY+ CG A A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 316 FNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLV 375
F +P+K+ +W ++ G+ +HG EA+ + +M ++ D+ + ++ + +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ K+ + R+ E + LVD + G++D A D + K N W AL+
Sbjct: 342 ELTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMG 399
Query: 436 ACRLHRNVKLAEISAQKLFE------MDPNKVSGYVCLS 468
H A KLFE + PN V+ LS
Sbjct: 400 GYANHGR----GTDAVKLFEKMIAANVAPNHVTFLAVLS 434
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/509 (37%), Positives = 293/509 (57%), Gaps = 3/509 (0%)
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
+NTM+ GYV +A ++ M + G D T LL AC L ++ GK +HG V
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ L + FV NS+I+MY C + + +FE L K SW+S++S G +
Sbjct: 160 KLG--LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSEC 217
Query: 243 LELF-GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L LF G +E ++S L AC+ AL LG S+H +L++ +N V TSL+
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVD 277
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY CG A F ++ ++ +++ M++G +HG+G A+ +F++M+ + + PD V
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ +VL+ACSHSGLV EG+ +F +M ++ VEPT HY CLVDLLGRAG L+EA TI ++
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
++ N+ +W LS CR+ +N++L +I+AQ+L ++ + Y+ +SN+Y+ + W
Sbjct: 398 PIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVA 457
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMP 541
P +S EL H+F + D SH + +IY L + QLK GY P
Sbjct: 458 RTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSP 517
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
D + +L +V+ E K++ L HS+++A+AF L+ T PG+ I+I +NLR+C DCHT K +S
Sbjct: 518 DLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKIS 577
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
+ REI++RD RFH F+ G CSC YW
Sbjct: 578 MIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 172/335 (51%), Gaps = 8/335 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A IF I +F +N+MIRGY S +L Y EM+ G + DNFTYP +
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYV---NVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LKAC L G ++HG V GLE+DV+V NSLI+MY + G+M + VF+K+ +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SW++M+S G + ++F M + L + + M++ L AC + L LG ++HG
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+++RN L N V S++DMY C + A +F+ + ++ ++++++ISG G
Sbjct: 259 FLLRNISEL--NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS- 298
L +F +M G PD V +SVL ACS + G V + ++K+G TA
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC 376
Query: 299 LISMYANCGSFLCAHRAFNEIP-DKSLASWTVMVT 332
L+ + G A IP +K+ W ++
Sbjct: 377 LVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 3/231 (1%)
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
A +F G+ T +N++I GY + L + +M G PD T +L AC+R
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
+ ++ G +H + K G + V SLI+MY CG + F ++ K+ ASW+ M
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 331 VTGFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDY 389
V+ G E + +F M + N+ +E + L AC+++G ++ G I + R+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 390 NVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
+ E + LVD+ + G LD+A M+ K N ++A++S LH
Sbjct: 265 S-ELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALH 313
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/588 (36%), Positives = 332/588 (56%), Gaps = 17/588 (2%)
Query: 53 DNFTYPFVLKACGDLLLREMGIRVHGLVVVDGL--ESDVYVGN-SLISMYLKFGDMGTAR 109
D+ ++ + G L LR+ +H L++ L SDV+ S +++ L D+ +
Sbjct: 11 DDHLLSLIVSSTGKLHLRQ----IHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSC 66
Query: 110 LVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGDL 168
VF + L+ NTM+ + + + F +F +RR S L + + L C
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 169 MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNS 228
DL G +HG + + G LS++ +T +++D+Y C+ + A K+F+ + +DTVSWN
Sbjct: 127 GDLLGGLQIHGKIFSD-GFLSDSLLMT-TLMDLYSTCENSTDACKVFDEIPKRDTVSWNV 184
Query: 229 LISGYEKCGGAFQVLELFGQMF--IGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLV 285
L S Y + VL LF +M + G V PD VT + L AC+ + AL G VH ++
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 286 KKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAIS 345
+ G + +L+SMY+ CGS A++ F + ++++ SWT +++G ++G G+EAI
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 346 IFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM-TRDYNVEPTTTHYSCLVDL 404
FNEML I+P+E T +LSACSHSGLV EG F +M + ++ ++P HY C+VDL
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDL 364
Query: 405 LGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGY 464
LGRA LD+AY+ I +M++KP+ +W LL ACR+H +V+L E L E+ + Y
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 465 VCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIY 524
V L N Y+ +W P S EL VH+F D SH + ++IY
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Query: 525 AKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEK--MLWDHSERLALAFALINTGPGTTIR 582
L ++N+QLK GY+ + +S L+++E+E +EK L HSE+LA+AF ++ T PGTTIR
Sbjct: 485 KMLAEINQQLKIAGYVAEITSELHNLESE-EEKGYALRYHSEKLAIAFGILVTPPGTTIR 543
Query: 583 ITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
+TKNLR CVDCH K VS + R +I+RD RFHHF+ G CSC +W
Sbjct: 544 VTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 153/400 (38%), Gaps = 78/400 (19%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM---LSFGQKADNFTYPFVLKA 63
+FD+I +++ WN + ++C + LVL+ +M + K D T L+A
Sbjct: 170 VFDEIPKRDTVSWNVL---FSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C +L + G +VH + +GL + + N+L+SMY + G M A VF M R++ SW
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
++SG NG +A F+ M + G+ + T+ LLSAC G G +
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS-----HSGLVAEGMMFF 341
Query: 184 NSGRLSNNEFVTNSMIDMY-CNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ R+ + EF + Y C D + AR L + SLI E
Sbjct: 342 D--RMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAY---------SLIKSME-------- 382
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
PD ++LGAC + LG V S+L+
Sbjct: 383 -----------MKPDSTIWRTLLGACRVHGDVELGERVISHLI----------------- 414
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
E+ + + +++ + GK + + + M K I G
Sbjct: 415 ---------------ELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCS 459
Query: 363 TAVLSACSHSGLVDE----GKEIFYKMTRDYNVEPTTTHY 398
L H +VD+ KE YKM + N + Y
Sbjct: 460 AIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 307/559 (54%), Gaps = 20/559 (3%)
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN-GEAGDAFVVFDHMR 147
+++ ++ + F D+ A VFD + WNT++ + +AF+++ M
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 148 RSGLVG-DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD 206
G D T +L AC + GK VH +V++ + +V N +I +Y +C
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHG--FGGDVYVNNGLIHLYGSCG 200
Query: 207 FISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLG 266
+ ARK+F+ + + VSWNS+I + G L+LF +M PD T+ SVL
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLS 259
Query: 267 ACSRISALLLGSSVHSYLVKK---GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS 323
AC+ + +L LG+ H++L++K M+ V SLI MY CGS A + F + +
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 324 LASWTVMVTGFGIHGKGREAISIFNEMLGK--NITPDEGVFTAVLSACSHSGLVDEGKEI 381
LASW M+ GF HG+ EA++ F+ M+ K N+ P+ F +L AC+H G V++G++
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 382 FYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC-RLH 440
F M RDY +EP HY C+VDL+ RAG + EA + +M +KP+ +W +LL AC +
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Query: 441 RNVKLAEISAQKLFEMDPNKVS-------GYVCLSNIYAAEKRWXXXXXXXXXXXXXXXX 493
+V+L+E A+ + + S YV LS +YA+ RW
Sbjct: 440 ASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIR 499
Query: 494 XPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSV-LYDVEA 552
P S E+N + H+FFAGDTSH Q+ IY +LK ++++L+ +GY+PD S L D
Sbjct: 500 KEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATN 559
Query: 553 E-VKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMR 611
+ KE L HSERLA+AF LIN P T IRI KNLRVC DCH V K++SK+ + EII+R
Sbjct: 560 DGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVR 619
Query: 612 DICRFHHFRDGICSCGGYW 630
D RFHHF+DG CSC YW
Sbjct: 620 DRVRFHHFKDGSCSCLDYW 638
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKA-DNFTYPFVLKACG 65
+FD I +SF+WN++IR AC+ + + +LYR+ML G+ + D T+PFVLKAC
Sbjct: 105 VFDSIENHSSFMWNTLIR--ACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 162
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
+ G +VH +V G DVYV N LI +Y G + AR VFD+MP R L SWN+
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
M+ V+ GE A +F M+RS DG TM ++LSAC L L LG H +++R
Sbjct: 223 MIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 186 G-RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLE 244
++ + V NS+I+MYC C + A ++F+G+ +D SWN++I G+ G A + +
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 245 LFGQMFIG--GAVPDEVTVISVLGACS 269
F +M P+ VT + +L AC+
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACN 368
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 129/280 (46%), Gaps = 19/280 (6%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREML-SFGQKADNFTYPFVLK 62
A+ +FD++ ++ WNSMI +S +L L+REM SF + D +T VL
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDS---ALQLFREMQRSF--EPDGYTMQSVLS 259
Query: 63 ACGDLLLREMGIRVHGLVV----VDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
AC L +G H ++ VD + DV V NSLI MY K G + A VF M R
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHM--RRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
DL SWN M+ G+ +G A +A FD M +R + + T + LL AC + G+
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEK 235
+VR+ E ++D+ +I+ A + + +K D V W SL+ K
Sbjct: 379 YFDMMVRDYCIEPALEHY-GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
G + ++ E + IG +E S G CS LL
Sbjct: 438 KGASVELSEEIARNIIGTKEDNE----SSNGNCSGAYVLL 473
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 299/563 (53%), Gaps = 39/563 (6%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFG---QKADNFTYPFVLKA 63
I I N F WN IRG++ S + S +LY++ML G + D+FTYP + K
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSES---ENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C DL L +G + G V+ LE +V N+ I M+ GDM AR VFD+ PVRDL SW
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N +++GY K GEA A V+ M G+ D TM+ L+S+C L DL GK + YV
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG------ 237
N R++ + N+++DM+ C I AR++F+ L + VSW ++ISGY +CG
Sbjct: 286 NGLRMTIP--LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 238 -------------------GAFQV------LELFGQMFIGGAVPDEVTVISVLGACSRIS 272
G+ Q L LF +M PDE+T+I L ACS++
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVT 332
AL +G +H Y+ K +N A+GTSL+ MYA CG+ A F+ I ++ ++T ++
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 333 GFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVE 392
G +HG AIS FNEM+ I PDE F +LSAC H G++ G++ F +M +N+
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 523
Query: 393 PTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQK 452
P HYS +VDLLGRAG L+EA +++M ++ + VW ALL CR+H NV+L E +A+K
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKK 583
Query: 453 LFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFA 512
L E+DP+ YV L +Y W P S E+N +V +F
Sbjct: 584 LLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIV 643
Query: 513 GDTSHQQSDDIYAKLKDLNEQLK 535
D S +S+ IY +L L ++
Sbjct: 644 RDKSRPESEKIYDRLHCLGRHMR 666
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 167/372 (44%), Gaps = 40/372 (10%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +FD+ ++ WN +I GY + +++ +Y+ M S G K D+ T +
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGY---KKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ +C L G + V +GL + + N+L+ M+ K GD+ AR +FD + R +
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 121 TSWNTMMSGYVKNG-------------------------------EAGDAFVVFDHMRRS 149
SW TM+SGY + G DA +F M+ S
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 150 GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
D TM+ LSAC L L +G +H Y+ + S LS N + S++DMY C IS
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS--LSLNVALGTSLVDMYAKCGNIS 441
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A +F G+ ++++++ ++I G G A + F +M G PDE+T I +L AC
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVG--TSLISMYANCGSFLCAHRAFNEIP-DKSLAS 326
+ G S + K + +N + + ++ + G A R +P + A
Sbjct: 502 HGGMIQTGRDYFSQM-KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 560
Query: 327 WTVMVTGFGIHG 338
W ++ G +HG
Sbjct: 561 WGALLFGCRMHG 572
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/482 (39%), Positives = 282/482 (58%), Gaps = 16/482 (3%)
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
T++L + S+CGDL + V +SG S + NS+++ Y I ARKLF
Sbjct: 101 TSLLNMYSSCGDLRSAQ-------RVFDDSG--SKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA-----VPDEVTVISVLGACSR 270
+ + ++ +SW+ LI+GY CG + L+LF +M + P+E T+ +VL AC R
Sbjct: 152 DEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI-PDKSLASWTV 329
+ AL G VH+Y+ K ++ +GT+LI MYA CGS A R FN + K + +++
Sbjct: 212 LGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSA 271
Query: 330 MVTGFGIHGKGREAISIFNEML-GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
M+ ++G E +F+EM NI P+ F +L AC H GL++EGK F M +
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEI 448
+ + P+ HY C+VDL GR+G + EA + I +M ++P+ +W +LLS R+ ++K E
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEG 391
Query: 449 SAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVH 508
+ ++L E+DP YV LSN+YA RW P S+ E+ +VH
Sbjct: 392 ALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVH 451
Query: 509 QFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLAL 568
+F GD S Q+S+ IYA L ++ ++L++ GY+ DT VL D+ + KE L HSE+LA+
Sbjct: 452 EFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAI 511
Query: 569 AFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGG 628
AF L+ T PGT +RI KNLR+C DCH VMKM+SKL SREI++RD RFHHFRDG CSC
Sbjct: 512 AFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRD 571
Query: 629 YW 630
+W
Sbjct: 572 FW 573
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 163/360 (45%), Gaps = 44/360 (12%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
SFLWN +IR + + +Y M + D T+PF+L + + L +G
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
R H +++ GL+ D +V SL++MY GD+ +A+ VFD +DL +WN++++ Y K G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 135 EAGDAFVVFDHMRRSGLVG------------------------------------DGTTM 158
DA +FD M ++ + TM
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 159 LALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGL 218
+LSACG L L+ GK VH Y+ + + + + ++IDMY C + A+++F L
Sbjct: 203 STVLSACGRLGALEQGKWVHAYI--DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 219 -AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLL 276
+ KD +++++I G + +LF +M + P+ VT + +LGAC +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 277 GSSVHSYLVKKGYGMNTAVGT--SLISMYANCGSFLCAHRAFNEIP-DKSLASWTVMVTG 333
G S ++++ +G+ ++ ++ +Y G A +P + + W +++G
Sbjct: 321 GKSYFKMMIEE-FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 18/266 (6%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM-LSFGQKA----DNFTYP 58
A+ +FD++ +N W+ +I GY +L L+REM L +A + FT
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCG---KYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM-PV 117
VL ACG L E G VH + +E D+ +G +LI MY K G + A+ VF+ +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG-DGTTMLALLSACGDLMDLKLGKA 176
+D+ +++ M+ G + F +F M S + + T + +L AC + GK+
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISG--- 232
++ G + + M+D+Y I A + ++ D + W SL+SG
Sbjct: 324 YFKMMIEEFGITPSIQHY-GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 233 ---YEKCGGAFQVLELFGQMFIGGAV 255
+ C GA + L M G V
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYV 408
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 37/215 (17%)
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
PD T +L + L LG H+ ++ G + V TSL++MY++CG A R
Sbjct: 60 PDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRV 119
Query: 316 -------------------------------FNEIPDKSLASWTVMVTGFGIHGKGREAI 344
F+E+P++++ SW+ ++ G+ + GK +EA+
Sbjct: 120 FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEAL 179
Query: 345 SIFNEM-LGKN----ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYS 399
+F EM L K + P+E + VLSAC G +++GK + + + Y+VE +
Sbjct: 180 DLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK-YHVEIDIVLGT 238
Query: 400 CLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
L+D+ + G L+ A + + K + ++A++
Sbjct: 239 ALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 316/583 (54%), Gaps = 47/583 (8%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYA---CSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
A +F +I + +WN+MI+G++ C G + LY ML G D+ T+PF+
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEG------VRLYLNMLKEGVTPDSHTFPFL 140
Query: 61 L---KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
L K G L G ++H VV GL S++YV N+L+ MY G M AR VFD+
Sbjct: 141 LNGLKRDGGAL--ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
D+ SWN M+SGY + E ++ + M R+ + T+L +LSAC + D L K V
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNC----------------DFISG----------- 210
H YV + + + + N++++ Y C D IS
Sbjct: 259 HEYV--SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 211 ----ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLG 266
AR F+ + V+D +SW +I GY + G + LE+F +M G +PDE T++SVL
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 267 ACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
AC+ + +L +G + +Y+ K + VG +LI MY CG A + F+++ + +
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 436
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
WT MV G +G+G+EAI +F +M +I PD+ + VLSAC+HSG+VD+ ++ F KM
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
D+ +EP+ HY C+VD+LGRAG + EAY + M + PN VW ALL A RLH + +A
Sbjct: 497 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 556
Query: 447 EISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKM 506
E++A+K+ E++P+ + Y L NIYA KRW P +S E+N
Sbjct: 557 ELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGF 616
Query: 507 VHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYD 549
H+F AGD SH QS++IY KL++L ++ Y+PDTS +L++
Sbjct: 617 AHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 36/364 (9%)
Query: 103 GDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL 162
G + A +F K+P D+ WN M+ G+ K G+ ++ +M + G+ D T LL
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 163 SACG-DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK 221
+ D L GK +H +VV+ L +N +V N+++ MY C + AR +F+ +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFG--LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
D SWN +ISGY + + +EL +M P VT++ VL ACS++ L VH
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA-------------------------- 315
Y+ + + + +L++ YA CG A R
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 316 -----FNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
F+++P + SWT+M+ G+ G E++ IF EM + PDE +VL+AC+
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVW 430
H G ++ G+ I + ++ ++ + L+D+ + G ++A +M + ++ W
Sbjct: 380 HLGSLEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTW 437
Query: 431 TALL 434
TA++
Sbjct: 438 TAMV 441
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 7/242 (2%)
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
+S A KLF + D V WN++I G+ K + + L+ M G PD T +L
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 268 CSRI-SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
R AL G +H ++VK G G N V +L+ MY+ CG A F+ + + S
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
W +M++G+ + E+I + EM ++P VLSACS D K + ++
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV-HEYV 262
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLHRNVK 444
+ EP+ + LV+ G++D A +MK + DV WT+++ N+K
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR---DVISWTSIVKGYVERGNLK 319
Query: 445 LA 446
LA
Sbjct: 320 LA 321
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 361 bits (926), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 315/593 (53%), Gaps = 41/593 (6%)
Query: 75 RVHGLVVVDG-LESDVYVGNSLISMYL---KFGDMGTARLVFDKMPVRDLTSWNTMMSGY 130
++H + VDG L+ D VG+ + ++ L K+ D A + D+ L + N+M+ +
Sbjct: 24 QIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDY--ANQILDRSEKPTLFALNSMIRAH 81
Query: 131 VKNGEAGDAFVVFDHMRRSG--LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRL 188
K+ +F + + SG L D T+ L+ AC L + G VHG +R
Sbjct: 82 CKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG--F 139
Query: 189 SNNEFVTNSMIDMYCN-------------------------------CDFISGARKLFEG 217
N+ V +I +Y C + ARKLFEG
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 218 LAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLG 277
+ +D ++WN++ISGY + G + + L +F M + G + V +ISVL AC+++ AL G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
HSY+ + + + T+L+ +YA CG A F + +K++ +W+ + G ++
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH 397
G G + + +F+ M +TP+ F +VL CS G VDEG+ F M ++ +EP H
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMD 457
Y CLVDL RAG+L++A + I M +KP+ VW++LL A R+++N++L ++++K+ E++
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
Query: 458 PNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSH 517
YV LSNIYA W P S E+N VH+FF GD SH
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 518 QQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGP 577
+ I A KD++ +L+ GY DT+ V++D++ E KE L HSE+ A+AF +++
Sbjct: 500 PKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKE 559
Query: 578 GTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
IRI KNLRVC DCH V M+SK+ +REII+RD RFHHF+DG CSC G+W
Sbjct: 560 DVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 178/364 (48%), Gaps = 42/364 (11%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ--KADNFTYPFVL 61
A I D+ F NSMIR + S +S YR +LS G K DN+T F++
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSP---VPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKF------------------- 102
+AC L +RE G++VHG+ + G ++D +V LIS+Y +
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 103 ------------GDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
GD+ AR +F+ MP RD +WN M+SGY + GE+ +A VF M+ G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
+ +G M+++LSAC L L G+ H Y+ RN +++ + +++D+Y C +
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVR--LATTLVDLYAKCGDMEK 293
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
A ++F G+ K+ +W+S ++G G + LELF M G P+ VT +SVL CS
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGT--SLISMYANCGSFLCAHRAFNEIPDKSLAS-W 327
+ + G H ++ +G+ + L+ +YA G A ++P K A+ W
Sbjct: 354 VGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVW 412
Query: 328 TVMV 331
+ ++
Sbjct: 413 SSLL 416
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 204/569 (35%), Positives = 315/569 (55%), Gaps = 17/569 (2%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+H L + G SD + N L+ Y+K ++ TAR +FD+M ++ SW +++SGY G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 136 AGDAFVVFDHMRRSGLVGDGT-TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+A +F M V T ++ AC L + ++GK +H + SG L N V
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL-EISG-LRRNIVV 168
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAV--KDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
++S++DMY C+ + AR++F+ + ++ VSW S+I+ Y + + +ELF + F
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNA 227
Query: 253 GAVPD---EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSF 309
D + + SV+ ACS + L G H + + GY NT V TSL+ MYA CGS
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
CA + F I S+ S+T M+ HG G A+ +F+EM+ I P+ VL AC
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNED- 428
SHSGLV+EG E M Y V P + HY+C+VD+LGR G++DEAY +++ +
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 429 -VWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXX 487
+W ALLSA RLH V++ ++++L + + S Y+ LSN YA W
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 488 XXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY------MP 541
+ S+ E V+ F AGD S +S +I LKDL +++K+ G+ +
Sbjct: 468 KRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMIT 527
Query: 542 DTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVS 601
+SSV DV+ E K++M+ H ERLALA+ L++ G+TIRI NLR+C DCH K++S
Sbjct: 528 TSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLIS 587
Query: 602 KLMSREIIMRDICRFHHFRDGICSCGGYW 630
+++ REI++RD+ RFH F++G C+C YW
Sbjct: 588 EIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 25/403 (6%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPFVLK 62
A+ +FD++ N W S+I GY +L ++++M N +T+ V K
Sbjct: 83 ARKLFDEMCEPNVVSWTSVISGYN---DMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP--VRDL 120
AC L +G +H + + GL ++ V +SL+ MY K D+ TAR VFD M R++
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT--MLA-LLSACGDLMDLKLGKAV 177
SW +M++ Y +N +A +F + L D MLA ++SAC L L+ GK
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSF-NAALTSDRANQFMLASVISACSSLGRLQWGKVA 258
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
HG V R G +N V S++DMY C +S A K+F + +S+ S+I K G
Sbjct: 259 HGLVTR--GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHG 316
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM--NTAV 295
++LF +M G P+ VT++ VL ACS + G S + +K YG+ ++
Sbjct: 317 LGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEK-YGVVPDSRH 375
Query: 296 GTSLISMYANCGSFLCAHRAFNEI---PDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
T ++ M G A+ I ++ W +++ +HG+ + I +E
Sbjct: 376 YTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR----VEIVSEASK 431
Query: 353 KNITPDEGV---FTAVLSACSHSGLVDEGKEIFYKMTRDYNVE 392
+ I ++ V + A+ +A + SG ++ + + +M R NV+
Sbjct: 432 RLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVK 474
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 199/633 (31%), Positives = 325/633 (51%), Gaps = 17/633 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +FD++ N+ +MI YA +++ L+ ML+ G K + Y +
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYA---EQGILDKAVGLFSGMLASGDKPPSSMYTTL 190
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LK+ + + G ++H V+ GL S+ + +++MY+K G + A+ VFD+M V+
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+ +M GY + G A DA +F + G+ D +L AC L +L LGK +H
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
V + L + V ++D Y C A + F+ + + VSW+++ISGY +
Sbjct: 311 VAKLG--LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFE 368
Query: 241 QVLELFGQMFIGGA-VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ ++ F + A + + T S+ ACS ++ +G VH+ +K+ + ++L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I+MY+ CG A+ F + + + +WT ++G +G EA+ +F +M+ + P+
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F AVL+ACSH+GLV++GK M R YNV PT HY C++D+ R+G LDEA +
Sbjct: 489 VTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMK 548
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
NM +P+ W LS C H+N++L EI+ ++L ++DP +GYV N+Y +W
Sbjct: 549 NMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEE 608
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
S S+ + +H+F GD H Q+ +IY KLK+ + G+
Sbjct: 609 AAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GF 662
Query: 540 MPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINT--GPGTTIRITKNLRVCVDCHTVM 597
M ++ + + L DHSERLA+AF LI+ I++ KNLR C DCH
Sbjct: 663 MEGD---MFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFA 719
Query: 598 KMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
K VS + EI++RD RFHHF++G CSC YW
Sbjct: 720 KHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 205/432 (47%), Gaps = 25/432 (5%)
Query: 43 REMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVD----GLES-DVYVGNSLIS 97
+EM G +++Y + +AC RE+ HG ++ D G+E+ V + N ++
Sbjct: 72 QEMDKAGVSVSSYSYQCLFEAC-----RELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQ 126
Query: 98 MYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT 157
MY + + A +FD+M + S TM+S Y + G A +F M SG +
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 158 MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG 217
LL + + L G+ +H +V+R L +N + +++MY C ++ GA+++F+
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIR--AGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 218 LAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLG 277
+AVK V+ L+ GY + G A L+LF + G D VL AC+ + L LG
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
+H+ + K G +VGT L+ Y C SF A RAF EI + + SW+ +++G+
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 338 GKGREAISIFNEMLGKNITP-DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
+ EA+ F + KN + + +T++ ACS + G ++ + ++ +
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK-RSLIGSQY 423
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE- 455
S L+ + + G LD+A ++M P+ WTA +S + N A +LFE
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNAS----EALRLFEK 478
Query: 456 -----MDPNKVS 462
M PN V+
Sbjct: 479 MVSCGMKPNSVT 490
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 153/312 (49%), Gaps = 4/312 (1%)
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N + K+ + +AF M ++G+ + L AC +L L G+ +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-- 109
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
G + + + N ++ MYC C + A KLF+ ++ + VS ++IS Y + G + +
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
LF M G P ++L + AL G +H+++++ G NT++ T +++MY
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
CG + A R F+++ K + T ++ G+ G+ R+A+ +F +++ + + D VF+
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
VL AC+ ++ GK+I + +E + + LVD + + A ++
Sbjct: 290 VVLKACASLEELNLGKQI-HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR- 347
Query: 424 KPNEDVWTALLS 435
+PN+ W+A++S
Sbjct: 348 EPNDVSWSAIIS 359
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 309/558 (55%), Gaps = 3/558 (0%)
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
G+++HG VV GL V N+LI+ Y K +R F+ P + T+W++++S + +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
N + M L D + + +C L +G++VH ++ +
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTG--YDADV 151
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
FV +S++DMY C I ARK+F+ + ++ V+W+ ++ GY + G + L LF +
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
++ + SV+ C+ + L LG +H +K + ++ VG+SL+S+Y+ CG A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
++ FNE+P K+L W M+ + H ++ I +F M + P+ F VL+ACSH+
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
GLVDEG+ F +M ++ +EPT HY+ LVD+LGRAG+L EA I NM + P E VW A
Sbjct: 332 GLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 433 LLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXX 492
LL++C +H+N +LA +A K+FE+ P ++ LSN YAA+ R+
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGE 450
Query: 493 XXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEA 552
S+ E VH F AG+ H++S +IY KL +L E+++K GY+ DTS VL +V+
Sbjct: 451 KKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDG 510
Query: 553 EVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRD 612
+ K + + HSERLA+AF LI IR+ KNLRVC DCH +K +S R II+RD
Sbjct: 511 DEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570
Query: 613 ICRFHHFRDGICSCGGYW 630
RFH F DG CSC YW
Sbjct: 571 NNRFHRFEDGKCSCNDYW 588
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 170/343 (49%), Gaps = 36/343 (10%)
Query: 28 CSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLES 87
C A SL ++M++ + D+ P K+C L ++G VH L + G ++
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA 149
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
DV+VG+SL+ MY K G++ AR +FD+MP R++ +W+ MM GY + GE +A +F
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 148 RSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
L + + +++S C + L+LG+ +HG + ++ FV +S++ +Y C
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHG--LSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
GA ++F + VK+ WN+++ Y + +V+ELF +M + G P+ +T ++VL A
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
CS H+ LV +G + S I E DK AS
Sbjct: 328 CS-----------HAGLVDEGRYYFDQMKESRI-----------------EPTDKHYAS- 358
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
+V G G+ +EA+ + M I P E V+ A+L++C+
Sbjct: 359 --LVDMLGRAGRLQEALEVITNM---PIDPTESVWGALLTSCT 396
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 6/229 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ +N W+ M+ GYA G N +L L++E L +++++ V+
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYA-QMGENEE--ALWLFKEALFENLAVNDYSFSSVISV 226
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + L E+G ++HGL + +S +VG+SL+S+Y K G A VF+++PV++L W
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N M+ Y ++ +F M+ SG+ + T L +L+AC + G+ + +
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGR--YYFDQM 344
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSLIS 231
R+ + S++DM + A ++ + + T S W +L++
Sbjct: 345 KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 261 VISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP 320
+ +L + +R + + G +H Y+VK G + V +LI+ Y+ + RAF + P
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 321 DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKE 380
KS +W+ +++ F + ++ +M+ N+ PD+ V + +C+ D G+
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 381 IF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
+ M Y+ + S LVD+ + G++ A D M + N W+ ++
Sbjct: 138 VHCLSMKTGYDADVFVG--SSLVDMYAKCGEIVYARKMFDEMPQR-NVVTWSGMM 189
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 297/534 (55%), Gaps = 6/534 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ + ++NSMI Y+ G + L LY +M++ + D+ T+ +KA
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYS---RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA 125
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C L+ E G V V G ++DV+V +S++++Y+K G M A ++F KM RD+ W
Sbjct: 126 CLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICW 185
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
TM++G+ + G++ A + M+ G D ML LL A GDL D K+G++VHGY+ R
Sbjct: 186 TTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR 245
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
L N V S++DMY FI A ++F + K VSW SLISG+ + G A +
Sbjct: 246 TG--LPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
E +M G PD VT++ VL ACS++ +L G VH Y++K+ + ++ T+L+ MY
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRVTATALMDMY 362
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
+ CG+ + F + K L W M++ +GIHG G+E +S+F +M NI PD F
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
++LSA SHSGLV++G+ F M Y ++P+ HY CL+DLL RAG+++EA I++ KL
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKL 482
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXX 483
+W ALLS C HRN+ + +I+A K+ +++P+ + +SN +A +W
Sbjct: 483 DNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKV 542
Query: 484 XXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
P YS E+N + F D SH + + L++L +++ V
Sbjct: 543 RKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 169/336 (50%), Gaps = 10/336 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +A+++F ++ ++ W +M+ G+A AG S +++ YREM + G D +
Sbjct: 167 MDEAEVLFGKMAKRDVICWTTMVTGFA-QAG--KSLKAVEFYREMQNEGFGRDRVVMLGL 223
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L+A GDL +MG VHG + GL +V V SL+ MY K G + A VF +M +
Sbjct: 224 LQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTA 283
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW +++SG+ +NG A AF M+ G D T++ +L AC + LK G+ VH Y
Sbjct: 284 VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY 343
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++ R + +++DMY C +S +R++FE + KD V WN++IS Y G
Sbjct: 344 ILK---RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQ 400
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TS 298
+V+ LF +M PD T S+L A S + G S ++ K Y + +
Sbjct: 401 EVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK-YKIQPSEKHYVC 459
Query: 299 LISMYANCGSFLCAHRAFN-EIPDKSLASWTVMVTG 333
LI + A G A N E D +L W +++G
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 182/375 (48%), Gaps = 6/375 (1%)
Query: 69 LREMGIRVHGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMM 127
L+ ++H V+ G L + + LI+ + G++ AR VFD++P R ++ +N+M+
Sbjct: 29 LKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMI 88
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
Y + + ++D M + D +T + AC + L+ G+AV V +
Sbjct: 89 VVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYK 148
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG 247
N+ FV +S++++Y C + A LF +A +D + W ++++G+ + G + + +E +
Sbjct: 149 --NDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+M G D V ++ +L A + +G SVH YL + G MN V TSL+ MYA G
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
A R F+ + K+ SW +++GF +G +A EM PD VL
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE 427
ACS G + G+ + + + + ++ T + L+D+ + G L + +++ K +
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRK-DL 383
Query: 428 DVWTALLSACRLHRN 442
W ++S +H N
Sbjct: 384 VCWNTMISCYGIHGN 398
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 348 bits (893), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 326/632 (51%), Gaps = 12/632 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVL 61
+A+ +FD + +N W +M++GY S L L++ M G+ + + F V
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGYQNSG---FDFEVLKLFKSMFFSGESRPNEFVATVVF 143
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
K+C + E G + HG + GL S +V N+L+ MY G A V D +P DL+
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+++ +SGY++ G + V V + T L+ L +L DL L VH +
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
VR + ++I+MY C + A+++F+ ++ +++ Y + +
Sbjct: 264 VRFG--FNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEE 321
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L LF +M P+E T +L + + +S L G +H ++K GY + VG +L++
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVN 381
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA GS A +AF+ + + + +W M++G HG GREA+ F+ M+ P+
Sbjct: 382 MYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRIT 441
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F VL ACSH G V++G F ++ + ++V+P HY+C+V LL +AG +A D M
Sbjct: 442 FIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE---DFM 498
Query: 422 KLKPNE-DV--WTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
+ P E DV W LL+AC + RN +L + A+ E PN YV LSNI+A + W
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVG 538
P S+ + H F A D H + IYAK+K++ ++K +G
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLG 618
Query: 539 YMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMK 598
Y PD + +DV+ E +E L HSE+LA+A+ LI T + + +TKN+R+C DCH+ +K
Sbjct: 619 YSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIK 678
Query: 599 MVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
++SK+ R I++RD RFHHF DG CSC YW
Sbjct: 679 LISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 195/413 (47%), Gaps = 13/413 (3%)
Query: 37 RSLVLYREMLSFGQKADNFTYPF-----VLKACGDLLLREMGIRVHGLVVVDGLES---D 88
+ L+ + ++ S K+ +P +LK C + +G +H ++V S D
Sbjct: 9 QRLLKWDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAED 68
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
Y NSLI++Y+K + AR +FD MP R++ SW MM GY +G + +F M
Sbjct: 69 AYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFF 128
Query: 149 SGLVGDGT-TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
SG + +C + ++ GK HG ++ L ++EFV N+++ MY C
Sbjct: 129 SGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYG--LISHEFVRNTLVYMYSLCSG 186
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
A ++ + L D ++S +SGY +CG + L++ + V + +T +S L
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
S + L L VHS +V+ G+ +LI+MY CG L A R F++ +++
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
T ++ + EA+++F++M K + P+E F +L++ + L+ +G ++ + +
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVL 365
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
+ LV++ ++G +++A M + + W ++S C H
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH 417
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/481 (38%), Positives = 276/481 (57%), Gaps = 10/481 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F+ I + ++WNSMIRGY+ S + ++L+ Y+EML G D FT+P+VLKA
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSP---NPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C L + G VHG VV G E ++YV L+ MY+ G++ VF+ +P ++ +W
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW 176
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV-- 181
+++SG+V N DA F M+ +G+ + T M+ LL ACG D+ GK HG++
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 182 ----VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
++ N + S+IDMY C + AR LF+G+ + VSWNS+I+GY + G
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
A + L +F M G PD+VT +SV+ A LG S+H+Y+ K G+ + A+
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC 356
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NIT 356
+L++MYA G A +AF ++ K +WTV++ G HG G EA+SIF M K N T
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
PD + VL ACSH GLV+EG+ F +M + +EPT HY C+VD+L RAG+ +EA
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 417 TIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKR 476
+ M +KPN ++W ALL+ C +H N++L + + E + YV LSNIYA R
Sbjct: 477 LVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGR 536
Query: 477 W 477
W
Sbjct: 537 W 537
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 192/409 (46%), Gaps = 15/409 (3%)
Query: 75 RVHGLVVVDGLESDVYVGNSLI---SMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
++HGL++ + +V + LI + + ++ AR VF+ + + WN+M+ GY
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+ A + + M R G D T +L AC L D++ G VHG+VV+ + N
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV--N 141
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
+V+ ++ MY C ++ ++FE + + V+W SLISG+ +E F +M
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY--------GMNTAVGTSLISMY 303
G +E ++ +L AC R ++ G H +L G+ G N + TSLI MY
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMY 261
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CG A F+ +P+++L SW ++TG+ +G EA+ +F +ML I PD+ F
Sbjct: 262 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 321
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
+V+ A G G+ I +++ V+ LV++ + G + A ++++
Sbjct: 322 SVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI-VCALVNMYAKTGDAESAKKAFEDLE- 379
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYA 472
K + WT ++ H + A Q++ E G L +YA
Sbjct: 380 KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 23/278 (8%)
Query: 158 MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF---ISGARKL 214
+L+ L C L++L +HG ++++S + N + +ID C +S AR +
Sbjct: 9 ILSQLENCRSLVELN---QLHGLMIKSS--VIRNVIPLSRLIDFCTTCPETMNLSYARSV 63
Query: 215 FEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISAL 274
FE + WNS+I GY + L + +M G PD T VL ACS + +
Sbjct: 64 FESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDI 123
Query: 275 LLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF 334
GS VH ++VK G+ +N V T L+ MY CG R F +IP ++ +W +++GF
Sbjct: 124 QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS-----------HSGLVDEGKEIFY 383
+ + +AI F EM + +E + +L AC H L G + ++
Sbjct: 184 VNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF 243
Query: 384 KMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ +NV T+ L+D+ + G L A D M
Sbjct: 244 QSKVGFNVILATS----LIDMYAKCGDLRTARYLFDGM 277
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 311/600 (51%), Gaps = 42/600 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A +F + ++ WNSM+ G+A + +L + M G + +++ V
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFA---QHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC L G++VH L+ SDVY+G++L+ MY K G++ A+ VFD+M R++
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN++++ + +NG A +A VF M S + D T+ +++SAC L +K+G+ VHG
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDT----------------- 223
VV+N +L N+ ++N+ +DMY C I AR +F+ + +++
Sbjct: 279 VVKND-KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 224 --------------VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
VSWN+LI+GY + G + L LF + P + ++L AC+
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 270 RISALLLGSSVHSYLVKKGYGMNTA------VGTSLISMYANCGSFLCAHRAFNEIPDKS 323
++ L LG H +++K G+ + VG SLI MY CG + F ++ ++
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 324 LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFY 383
SW M+ GF +G G EA+ +F EML PD VLSAC H+G V+EG+ F
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 384 KMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNV 443
MTRD+ V P HY+C+VDLLGRAG L+EA + I+ M ++P+ +W +LL+AC++HRN+
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 444 KLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFEL 503
L + A+KL E++P+ YV LSN+YA +W P S+ ++
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 504 NKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHS 563
H F D SH + I++ L L +++ + S L E + +LWD++
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGS-LSSEEMDYSSNLLWDNA 696
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 192/380 (50%), Gaps = 42/380 (11%)
Query: 53 DNFTYPFVLKACGDLLLREMGIR-VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLV 111
D+ + +L +C L + +R VH V+ G +++++ N LI Y K G + R V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 112 FDKMPVR-------------------------------DLTSWNTMMSGYVKNGEAGDAF 140
FDKMP R D +WN+M+SG+ ++ +A
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 141 VVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMID 200
F M + G V + + ++LSAC L D+ G VH + ++ ++ ++ ++++D
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP--FLSDVYIGSALVD 195
Query: 201 MYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVT 260
MY C ++ A+++F+ + ++ VSWNSLI+ +E+ G A + L++F M PDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 261 VISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV-GTSLISMYANCGSFLCAHRAFNEI 319
+ SV+ AC+ +SA+ +G VH +VK N + + + MYA C A F+ +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 320 PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
P +++ + T M++G+ + + A +F +M +N+ + A+++ + +G +E
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS----WNALIAGYTQNGENEEAL 371
Query: 380 EIFYKMTRDYNVEPTTTHYS 399
+F + R+ +V P THYS
Sbjct: 372 SLFCLLKRE-SVCP--THYS 388
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 156/337 (46%), Gaps = 41/337 (12%)
Query: 154 DGTTMLALLSACGDLMDLKLG----KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD--- 206
D + LL +C + KL + VH V+++ SN F+ N +ID Y C
Sbjct: 18 DSSPFAKLLDSC---IKSKLSAIYVRYVHASVIKSG--FSNEIFIQNRLIDAYSKCGSLE 72
Query: 207 ----------------------------FISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
F+ A LF + +D +WNS++SG+ +
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ L F M G V +E + SVL ACS ++ + G VHS + K + + +G++
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ MY+ CG+ A R F+E+ D+++ SW ++T F +G EA+ +F ML + PD
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
E +V+SAC+ + G+E+ ++ ++ + + VD+ + ++ EA
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE 455
D+M ++ N T+++S + + K A + K+ E
Sbjct: 313 DSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAE 348
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 303/540 (56%), Gaps = 17/540 (3%)
Query: 18 LWNSMIRGYACSAGGNSSSR--SLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG-I 74
LW+S+I ++ GG + +R S + YR M G T+P +LKA LR+
Sbjct: 69 LWDSLIGHFS---GGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV--FKLRDSNPF 123
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
+ H +V GL+SD +V NSLIS Y G A +FD +D+ +W M+ G+V+NG
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
A +A V F M+++G+ + T++++L A G + D++ G++VHG + +GR+ + F+
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL-ETGRVKCDVFI 242
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
+S++DMY C A+K+F+ + ++ V+W +LI+GY + + + +F +M
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
P+E T+ SVL AC+ + AL G VH Y++K +NT GT+LI +Y CG A
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
F + +K++ +WT M+ GF HG R+A +F ML +++P+E F AVLSAC+H GL
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
Query: 375 VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
V+EG+ +F M +N+EP HY+C+VDL GR G L+EA A I+ M ++P VW AL
Sbjct: 423 VEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Query: 435 SACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXX 494
+C LH++ +L + +A ++ ++ P+ Y L+N+Y+ + W
Sbjct: 483 GSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVK 542
Query: 495 PPSYSFFELNKMVHQFFAGDTSHQ-QSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAE 553
P +S+ E+ + +F A D +SDD+Y L + Q++ +PD L DV AE
Sbjct: 543 SPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR----LPDE---LEDVTAE 595
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 25/238 (10%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
AQ +FD++ +N W ++I GY S + ++++ EML + T VL A
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQS---RCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + G RVH ++ + +E + G +LI +Y+K G + A LVF+++ +++ +W
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
M++G+ +G A DAF +F M S + + T +A+LSAC HG +V
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA-----------HGGLVE 424
Query: 184 NSGRL-------SNNEFVTNS---MIDMYCNCDFISGARKLFEGLAVKDT-VSWNSLI 230
RL N E + M+D++ + A+ L E + ++ T V W +L
Sbjct: 425 EGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/645 (33%), Positives = 331/645 (51%), Gaps = 32/645 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + +N W ++I GY GN L+ MLS + FT VL +
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYV--QAGNEQ-EGFCLFSSMLSHC-FPNEFTLSSVLTS 170
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTAR---LVFDKMPVRDL 120
C E G +VHGL + GL +YV N++ISMY + D A VF+ + ++L
Sbjct: 171 CR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNL 226
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA---CGDLMDLKLGKA- 176
+WN+M++ + A VF M G+ D T+L + S+ DL+ ++ K
Sbjct: 227 VTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCC 286
Query: 177 --VHGYVVRNSGRLSNNEFVTNSMIDMYCNC--DFISGARKLFEGLAVKDTVSWNSLISG 232
+H V+ SG ++ E V ++I +Y D+ + E +D V+WN +I+
Sbjct: 287 LQLHSLTVK-SGLVTQTE-VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA 344
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
+ + + LFGQ+ PD T SVL AC+ + S+H+ ++K G+ +
Sbjct: 345 F-AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLAD 403
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
T + SLI YA CGS R F+++ + + SW M+ + +HG+ + +F +M
Sbjct: 404 TVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM-- 461
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
+I PD F A+LSACSH+G V+EG IF M P HY+C++D+L RA +
Sbjct: 462 -DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFA 520
Query: 413 EAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM-DPNKVSGYVCLSNIY 471
EA I M + P+ VW ALL +CR H N +L +++A KL E+ +P Y+ +SNIY
Sbjct: 521 EAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIY 580
Query: 472 AAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLN 531
AE + P S+ E+ VH+F +G + +Y +LK L
Sbjct: 581 NAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLI 640
Query: 532 EQLKKVGYMPD-TSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTT-----IRITK 585
LK++GY+P+ S+ + E +E L HSE+LALAFA++ + I+I K
Sbjct: 641 SWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMK 700
Query: 586 NLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
N R+C+DCH MK+ SKL+ +EI+MRD RFHHF+D CSC YW
Sbjct: 701 NTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 28/428 (6%)
Query: 56 TYPFVLKACGDL--LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFD 113
Y + +AC + LL + + H L +V + N LI+MY K G++ AR VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 114 KMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKL 173
MP R++ SW +++GYV+ G + F +F M S + T+ ++L++C +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSC----RYEP 175
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARK---LFEGLAVKDTVSWNSLI 230
GK VHG ++ L + +V N++I MY C + A + +FE + K+ V+WNS+I
Sbjct: 176 GKQVHGLALKLG--LHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 231 SGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGS------SVHSYL 284
+ ++ C + + +F +M G D T++++ + + S L+ +HS
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 285 VKKGYGMNTAVGTSLISMYAN-CGSFLCAHRAFNEIPD-KSLASWTVMVTGFGIHGKGRE 342
VK G T V T+LI +Y+ + ++ F E+ + + +W ++T F ++ R
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPER- 352
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
AI +F ++ + ++PD F++VL AC+ I ++ + + T + S L+
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS-LI 411
Query: 403 DLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLHRNVKLAEISAQKLFEMDPNK 460
+ G LD D+M + DV W ++L A LH V QK+ +++P+
Sbjct: 412 HAYAKCGSLDLCMRVFDDMD---SRDVVSWNSMLKAYSLHGQVDSILPVFQKM-DINPDS 467
Query: 461 VSGYVCLS 468
+ LS
Sbjct: 468 ATFIALLS 475
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 193/446 (43%), Gaps = 61/446 (13%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV-- 60
+A +F+ I FKN WNSMI + C N +++ ++ M S G D T +
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCC---NLGKKAIGVFMRMHSDGVGFDRATLLNICS 269
Query: 61 -LKACGDLLLREMG---IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGT--ARLVFDK 114
L DL+ E+ +++H L V GL + V +LI +Y + + T +L +
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329
Query: 115 MPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLG 174
RD+ +WN +++ + + A +F +R+ L D T ++L AC L+ +
Sbjct: 330 SHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA 388
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYE 234
++H V++ G + + NS+I Y C + ++F+ + +D VSWNS++ Y
Sbjct: 389 LSIHAQVIK--GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYS 446
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
G +L +F +M I PD T I++L ACS H+ V++G
Sbjct: 447 LHGQVDSILPVFQKMDIN---PDSATFIALLSACS-----------HAGRVEEG------ 486
Query: 295 VGTSLISMYANCGSFLCAHRAFNEIPD--KSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
L R+ E P+ L + ++ + EA + +M
Sbjct: 487 ---------------LRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM-- 529
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKL 411
+ PD V+ A+L +C G GK K+ VEPT + Y + ++ G
Sbjct: 530 -PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKEL--VEPTNSMSYIQMSNIYNAEGSF 586
Query: 412 DEAYATIDNM---KLKPNEDV-WTAL 433
+EA +I M +++ D+ WT +
Sbjct: 587 NEANLSIKEMETWRVRKEPDLSWTEI 612
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 277/530 (52%), Gaps = 17/530 (3%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F+Q+ N L NS+IR +A + ++ ++ EM FG ADNFTYPF+LKAC
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHA---QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGT--ARLVFDKMPVRDLTSWN 124
+ +H + GL SD+YV N+LI Y + G +G A +F+KM RD SWN
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 125 TMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRN 184
+M+ G VK GE DA +FD M + L+ TML + C ++ KA +
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLIS-WNTMLDGYARCREM-----SKAFELF---- 239
Query: 185 SGRLSNNEFVTNSMIDMYCNCDFISGARKLFE--GLAVKDTVSWNSLISGYEKCGGAFQV 242
N ++M+ Y + AR +F+ L K+ V+W +I+GY + G +
Sbjct: 240 EKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEA 299
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
L QM G D VIS+L AC+ L LG +HS L + G N V +L+ M
Sbjct: 300 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 359
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG+ A FN+IP K L SW M+ G G+HG G+EAI +F+ M + I PD+ F
Sbjct: 360 YAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
AVL +C+H+GL+DEG + FY M + Y++ P HY CLVDLLGR G+L EA + M
Sbjct: 420 IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP 479
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
++PN +W ALL ACR+H V +A+ L ++DP Y LSNIYAA + W
Sbjct: 480 MEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD 539
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNE 532
P S EL +H+F D SH +SD IY L L E
Sbjct: 540 IRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 194/396 (48%), Gaps = 22/396 (5%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++H ++ L D+++ LIS A VF+++ ++ N+++ + +N
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ AF VF M+R GL D T LL AC L + K +H ++ + LS++ +V
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG--LSSDIYV 154
Query: 195 TNSMIDMYCNCD--FISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
N++ID Y C + A KLFE ++ +DTVSWNS++ G K G LF +M
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM--- 211
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
D ++ ++L +R + S L +K NT ++++ Y+ G A
Sbjct: 212 -PQRDLISWNTMLDGYARCREM----SKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 313 HRAFNE--IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
F++ +P K++ +WT+++ G+ G +EA + ++M+ + D ++L+AC+
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV- 429
SGL+ G I + R N+ + L+D+ + G L +A+ +++ P +D+
Sbjct: 327 ESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI---PKKDLV 382
Query: 430 -WTALLSACRLHRNVKLA-EISAQKLFE-MDPNKVS 462
W +L +H + K A E+ ++ E + P+KV+
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 195/411 (47%), Gaps = 58/411 (14%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSL---VLYREMLSFGQKADNFTYPFV 60
A +F+++ +++ WNSM+ G AG +R L + R+++S+ D +
Sbjct: 173 AMKLFEKMSERDTVSWNSMLGGLV-KAGELRDARRLFDEMPQRDLISWNTMLDGYAR--- 228
Query: 61 LKACGDLLLREMGIRVHGLVVVDGL-ESDVYVGNSLISMYLKFGDMGTARLVFDKMPV-- 117
REM + + + E + ++++ Y K GDM AR++FDKMP+
Sbjct: 229 --------CREMS---KAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA 277
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
+++ +W +++GY + G +A + D M SGL D ++++L+AC + L LG +
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
H + R++ L +N +V N+++DMY C + A +F + KD VSWN+++ G G
Sbjct: 338 HSILKRSN--LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ +ELF +M G PD+VT I+VL +C+ H+ L+ +G
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCN-----------HAGLIDEGIDY------ 438
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
F + ++ +P + + +V G G+ +EAI + M + P
Sbjct: 439 -----------FYSMEKVYDLVP--QVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEP 482
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRA 408
+ ++ A+L AC VD KE+ + + +P +YS L ++ A
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDP--GNYSLLSNIYAAA 531
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 319/603 (52%), Gaps = 44/603 (7%)
Query: 1 MPQAQLIFDQIV-FKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPF 59
+ +A+ +F+ + KN+ W SM+ GY+ + +++ +R++ G +++ +T+P
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYS---QNGFAFKAIECFRDLRREGNQSNQYTFPS 232
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
VL AC + +G++VH +V G ++++YV ++LI MY K +M +AR + + M V D
Sbjct: 233 VLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDD 292
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL--MDLKLGKAV 177
+ SWN+M+ G V+ G G+A +F M + D T+ ++L+ C L ++K+ +
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSA 351
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
H +V+ + + V N+++DMY + A K+FEG+ KD +SW +L++G G
Sbjct: 352 HCLIVKTG--YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNG 409
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ L+LF M +GG PD++ SVL A + ++ L G VH +K G+ + +V
Sbjct: 410 SYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN 469
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
SL++MY CGS A+ FN + + L +WT ++ G+
Sbjct: 470 SLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGY----------------------- 506
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+ +GL+++ + F M Y + P HY+C++DL GR+G +
Sbjct: 507 ------------AKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ M+++P+ VW A+L+A R H N++ E +A+ L E++PN YV LSN+Y+A R
Sbjct: 555 LHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQ 614
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
P S+ E VH F + D H + +IY+K+ ++ +K+
Sbjct: 615 DEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEA 674
Query: 538 GYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVM 597
GY D S L+D++ E KE L HSE+LA+AF L+ G IRI KNLRVC DCH+ M
Sbjct: 675 GYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAM 734
Query: 598 KMV 600
K++
Sbjct: 735 KLL 737
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 230/437 (52%), Gaps = 11/437 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +F KN+ WN++I GY C +G S + L+ EM S G K + +T V
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGY-CKSG--SKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP-VRD 119
L+ C L+L G ++HG + G + DV V N L++MY + + A +F+ M ++
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+W +M++GY +NG A A F +RR G + T ++L+AC + ++G VH
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHC 251
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+V++ N +V +++IDMY C + AR L EG+ V D VSWNS+I G + G
Sbjct: 252 CIVKSG--FKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI 309
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLG--ACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ L +FG+M D+ T+ S+L A SR + + + SS H +VK GY V
Sbjct: 310 GEALSMFGRMHERDMKIDDFTIPSILNCFALSR-TEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+L+ MYA G A + F + +K + SWT +VTG +G EA+ +F M ITP
Sbjct: 369 ALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
D+ V +VLSA + L++ G+++ + + + S LV + + G L++A
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNS-LVTMYTKCGSLEDANVI 487
Query: 418 IDNMKLKPNEDVWTALL 434
++M+++ + WT L+
Sbjct: 488 FNSMEIR-DLITWTCLI 503
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 38/391 (9%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
E D + N++I Y + A +F PV++ SWN ++SGY K+G +AF +F
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M+ G+ + T+ ++L C L+ L G+ +HG+ ++ L N V N ++ MY C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN--VVNGLLAMYAQC 173
Query: 206 DFISGARKLFEGL-AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
IS A LFE + K+ V+W S+++GY + G AF+ +E F + G ++ T SV
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L AC+ +SA +G VH +VK G+ N V ++LI MYA C A + +
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL------------SACSHS 372
SW M+ G G EA+S+F M +++ D+ ++L ++ +H
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHC 353
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
+V G YK+ + LVD+ + G +D A + M ++ + WTA
Sbjct: 354 LIVKTGYAT-YKLVNN-----------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTA 400
Query: 433 LLS----------ACRLHRNVKLAEISAQKL 453
L++ A +L N+++ I+ K+
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKI 431
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/564 (31%), Positives = 306/564 (54%), Gaps = 14/564 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +F + ++ WN MI GY S SL + EM+S G D T+ +L +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSG---LMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
E ++H ++ + D+++ ++LI Y K + A+ +F + D+ +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
M+SGY+ NG D+ +F + + + + T++++L G L+ LKLG+ +HG++++
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N + ++IDMY C ++ A ++FE L+ +D VSWNS+I+ + +
Sbjct: 470 KG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
++F QM + G D V++ + L AC+ + + G ++H +++K + ++LI MY
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN-ITPDEGVF 362
A CG+ A F + +K++ SW ++ G HGK ++++ +F+EM+ K+ I PD+ F
Sbjct: 588 AKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
++S+C H G VDEG F MT DY ++P HY+C+VDL GRAG+L EAY T+ +M
Sbjct: 648 LEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
P+ VW LL ACRLH+NV+LAE+++ KL ++DP+ YV +SN +A + W
Sbjct: 708 FPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTK 767
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYM-- 540
P YS+ E+NK H F +GD +H +S IY+ L L +L+ GY+
Sbjct: 768 VRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Query: 541 ------PDTSSVLYDVEAEVKEKM 558
P++S +Y V ++++M
Sbjct: 828 PYLPLHPESSRKVYPVSRFIEKEM 851
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 226/439 (51%), Gaps = 9/439 (2%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPFVLKACG 65
+FD+++ K+ +WN M+ GYA +S + + R Q + N T+ VL C
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR----MDQISPNAVTFDCVLSVCA 250
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
LL ++G+++HGLVVV G++ + + NSL+SMY K G A +F M D +WN
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
M+SGYV++G ++ F M SG++ D T +LL + +L+ K +H Y++R+S
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
+S + F+T+++ID Y C +S A+ +F D V + ++ISGY G LE+
Sbjct: 371 --ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F + P+E+T++S+L + AL LG +H +++KKG+ +G ++I MYA
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 488
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
CG A+ F + + + SW M+T AI IF +M I D +A
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
LSAC++ GK I M + +++ S L+D+ + G L A MK K
Sbjct: 549 LSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK- 606
Query: 426 NEDVWTALLSACRLHRNVK 444
N W ++++AC H +K
Sbjct: 607 NIVSWNSIIAACGNHGKLK 625
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 207/430 (48%), Gaps = 11/430 (2%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
WNS+I + + N ++L Y +ML FG D T+P ++KAC L + +
Sbjct: 106 WNSIISSFVRNGLLN---QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSD 162
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGD 138
V G++ + +V +SLI YL++G + +FD++ +D WN M++GY K G
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222
Query: 139 AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
F MR + + T +LS C + + LG +HG VV + + + NS+
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS--IKNSL 280
Query: 199 IDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDE 258
+ MY C A KLF ++ DTV+WN +ISGY + G + L F +M G +PD
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE 318
+T S+L + S+ L +H Y+++ ++ + ++LI Y C A F++
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 319 IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
+ +T M++G+ +G +++ +F ++ I+P+E ++L + G
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 379 KEIF-YKMTRDYNVEPTTTHYSC-LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
+E+ + + + ++ + C ++D+ + G+++ AY + + K + W ++++
Sbjct: 461 RELHGFIIKKGFD---NRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITR 516
Query: 437 CRLHRNVKLA 446
C N A
Sbjct: 517 CAQSDNPSAA 526
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 4/331 (1%)
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+L+AC + L G +VH ++V+ + D Y ++ MY G +F ++ +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 119 --DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
+ WN+++S +V+NG A + M G+ D +T L+ AC L + K G
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GID 158
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
V + G + NEFV +S+I Y I KLF+ + KD V WN +++GY KC
Sbjct: 159 FLSDTVSSLG-MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
G V++ F M + P+ VT VL C+ + LG +H +V G ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
SL+SMY+ CG F A + F + +W M++G+ G E+++ F EM+ +
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
PD F+++L + S ++ K+I + R
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/552 (33%), Positives = 302/552 (54%), Gaps = 9/552 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +FD++ ++ W +MI GYA S N ++R+ + EM+ G + FT VLK
Sbjct: 63 EARSLFDEMPDRDVVAWTAMITGYASS---NYNARAWECFHEMVKQGTSPNEFTLSSVLK 119
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFG-DMGTARLVFDKMPVRDLT 121
+C ++ + G VHG+VV G+E +YV N++++MY M A L+F + V++
Sbjct: 120 SCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDV 179
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+W T+++G+ G+ ++ M + + A + + GK +H V
Sbjct: 180 TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
++ +N V NS++D+YC C ++S A+ F + KD ++WN+LIS E+ + +
Sbjct: 240 IKRG--FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSS-E 296
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L +F + G VP+ T S++ AC+ I+AL G +H + ++G+ N + +LI
Sbjct: 297 ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALID 356
Query: 302 MYANCGSFLCAHRAFNEIPDK-SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MYA CG+ + R F EI D+ +L SWT M+ G+G HG G EA+ +F++M+ I PD
Sbjct: 357 MYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRI 416
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
VF AVLSAC H+GLV++G + F M +Y + P Y+C+VDLLGRAGK+ EAY ++
Sbjct: 417 VFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVER 476
Query: 421 MKLKPNEDVWTALLSACRLHR-NVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
M KP+E W A+L AC+ H+ N ++ ++A+K+ E+ P V YV LS IYAAE +W
Sbjct: 477 MPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVD 536
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
S+ + V F D + +Y+ L L E+ ++ GY
Sbjct: 537 FARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGY 596
Query: 540 MPDTSSVLYDVE 551
+P+ S++ D E
Sbjct: 597 VPELDSLVNDQE 608
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 177/348 (50%), Gaps = 11/348 (3%)
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
+ +LI Y + G + AR +FD+MP RD+ +W M++GY + A+ F M + G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF-IS 209
+ T+ ++L +C ++ L G VHG VV+ + + +V N+M++MY C +
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG--MEGSLYVDNAMMNMYATCSVTME 164
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A +F + VK+ V+W +LI+G+ G L+++ QM + A + + A +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
I ++ G +H+ ++K+G+ N V S++ +Y CG A F+E+ DK L +W
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR-- 387
+++ EA+ +F + P+ FT++++AC++ ++ G+++ ++ R
Sbjct: 285 LISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 388 -DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
+ NVE + L+D+ + G + ++ + + N WT+++
Sbjct: 344 FNKNVELA----NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 43/379 (11%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A LIF I KN W ++I G+ G L +Y++ML + +
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIG---GLKMYKQMLLENAEVTPYCITIA 219
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
++A + G ++H V+ G +S++ V NS++ +Y + G + A+ F +M +DL
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WNT++S ++ ++ +A ++F G V + T +L++AC ++ L G+ +HG
Sbjct: 280 ITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF-EGLAVKDTVSWNSLISGYEKCGGA 239
+ R + N + N++IDMY C I ++++F E + ++ VSW S++ GY G
Sbjct: 339 IFRRG--FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ +ELF +M G PD + ++VL AC H+ LV+KG
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACR-----------HAGLVEKGLKY-------- 437
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
F + PD+ + + +V G GK EA + M K PDE
Sbjct: 438 ---------FNVMESEYGINPDRDI--YNCVVDLLGRAGKIGEAYELVERMPFK---PDE 483
Query: 360 GVFTAVLSAC---SHSGLV 375
+ A+L AC H+GL+
Sbjct: 484 STWGAILGACKAHKHNGLI 502
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 3/246 (1%)
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
+ + ++I Y + AR LF+ + +D V+W ++I+GY + E F +M
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG-SF 309
G P+E T+ SVL +C + L G+ VH +VK G + V ++++MYA C +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
A F +I K+ +WT ++TGF G G + ++ +ML +N T + A
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
+ V GK+I + + + + ++DL R G L EA M+ K +
Sbjct: 224 ASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLIT 281
Query: 430 WTALLS 435
W L+S
Sbjct: 282 WNTLIS 287
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 287/536 (53%), Gaps = 7/536 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPF 59
M A +F I K+ W+S+I G++ +L +EMLSFG + + +
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFS---QLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
LKAC LL + G ++HGL + L + G SL MY + G + +AR VFD++ D
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SWN +++G NG A +A VF MR SG + D ++ +LL A M L G +H
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGG 238
Y+++ G L++ V NS++ MY C + LFE D+VSWN++++ +
Sbjct: 396 YIIK-WGFLADLT-VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
++L LF M + PD +T+ ++L C IS+L LGS VH Y +K G +
Sbjct: 454 PVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNG 513
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
LI MYA CGS A R F+ + ++ + SW+ ++ G+ G G EA+ +F EM I P+
Sbjct: 514 LIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPN 573
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
F VL+ACSH GLV+EG +++ M ++ + PT H SC+VDLL RAG+L+EA I
Sbjct: 574 HVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFI 633
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
D MKL+P+ VW LLSAC+ NV LA+ +A+ + ++DP + +V L +++A+ W
Sbjct: 634 DEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWE 693
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQL 534
P S+ E+ +H FFA D H + DDIY L ++ Q+
Sbjct: 694 NAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 199/411 (48%), Gaps = 12/411 (2%)
Query: 41 LYREMLS---FGQKADNF-----TYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVG 92
YRE L F QK +F TY ++ AC G ++H ++ + D +
Sbjct: 46 FYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN 105
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
N ++SMY K G + AR VFD MP R+L S+ ++++GY +NG+ +A ++ M + LV
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
D +++ AC D+ LGK +H V++ S++ N++I MY + +S A
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES--SSHLIAQNALIAMYVRFNQMSDAS 223
Query: 213 KLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRI 271
++F G+ +KD +SW+S+I+G+ + G F+ L +M G P+E S L ACS +
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL 283
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
GS +H +K N G SL MYA CG A R F++I ASW V++
Sbjct: 284 LRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVII 343
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
G +G EA+S+F++M PD ++L A + + +G +I + + +
Sbjct: 344 AGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGF 402
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRN 442
T + L+ + L + ++ + + W +L+AC H
Sbjct: 403 LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 213/435 (48%), Gaps = 13/435 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + +N + S+I GY+ + G + R LY +ML D F + ++KA
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR---LYLKMLQEDLVPDQFAFGSIIKA 177
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C +G ++H V+ S + N+LI+MY++F M A VF +P++DL SW
Sbjct: 178 CASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISW 237
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML-ALLSACGDLMDLKLGKAVHGYVV 182
+++++G+ + G +A M G+ + + L AC L+ G +HG +
Sbjct: 238 SSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI 297
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
++ L+ N S+ DMY C F++ AR++F+ + DT SWN +I+G G A +
Sbjct: 298 KS--ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ +F QM G +PD +++ S+L A ++ AL G +HSY++K G+ + V SL++M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 303 YANCGSFLCAHRAFNEIPDKSLA-SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
Y C C F + + + + SW ++T H + E + +F ML PD
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+L C + G ++ + + + P + L+D+ + G L +A D+M
Sbjct: 476 MGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 422 KLKPNEDV--WTALL 434
N DV W+ L+
Sbjct: 535 D---NRDVVSWSTLI 546
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 285/539 (52%), Gaps = 8/539 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM-LSFGQKADNFTYPF 59
M +A +FD++ + W+SM+ G+ S +++ +R M ++ D T
Sbjct: 112 MIEALRMFDELEKPDIVTWSSMVSGFE---KNGSPYQAVEFFRRMVMASDVTPDRVTLIT 168
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
++ AC L +G VHG V+ G +D+ + NSL++ Y K A +F + +D
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKD 228
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ SW+T+++ YV+NG A +A +VF+ M G + T+L +L AC DL+ G+ H
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+R L V+ +++DMY C A +F + KD VSW +LISG+ G A
Sbjct: 289 LAIRKG--LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 240 FQVLELFGQMFI-GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ +E F M + PD + ++ VLG+CS + L HSY++K G+ N +G S
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML-GKNITP 357
L+ +Y+ CGS A + FN I K WT ++TG+GIHGKG +A+ FN M+ + P
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+E F ++LSACSH+GL+ EG IF M DY + P HY+ LVDLLGR G LD A
Sbjct: 467 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
M P + LL ACR+H+N ++AE A+KLFE++ N Y+ +SN+Y + W
Sbjct: 527 TKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEW 586
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
+ S E+ + VH+F A D H + + +Y LK+L+ +K+
Sbjct: 587 ENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 245/471 (52%), Gaps = 13/471 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F ++ ++ + WN++++ + L + M +K DNFT P LKA
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSRE---KQWEEVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 64 CGDLLLREMGIRVHGLVVVD-GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
CG+L G +HG V D L SD+YVG+SLI MY+K G M A +FD++ D+ +
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
W++M+SG+ KNG A F M S + D T++ L+SAC L + +LG+ VHG+V
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+R SN+ + NS+++ Y A LF+ +A KD +SW+++I+ Y + G A +
Sbjct: 190 IRRG--FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L +F M G P+ TV+ VL AC+ L G H ++KG V T+L+
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT-PDEG 360
MY C S A+ F+ IP K + SW +++GF ++G +I F+ ML +N T PD
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
+ VL +CS G +++ K F+ Y + + LV+L R G L A +
Sbjct: 368 LMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 421 MKLKPNEDVWTALLSACRLH-RNVKLAEISAQ--KLFEMDPNKVSGYVCLS 468
+ LK + VWT+L++ +H + K E K E+ PN+V+ LS
Sbjct: 427 IALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 476
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 190/351 (54%), Gaps = 12/351 (3%)
Query: 101 KFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLA 160
KF AR +F +M R L WNT++ + + + F HM R D T+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 161 LLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV 220
L ACG+L ++ G+ +HG+V ++ L ++ +V +S+I MY C + A ++F+ L
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDV-TLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 221 KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSS 279
D V+W+S++SG+EK G +Q +E F +M + V PD VT+I+++ AC+++S LG
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
VH +++++G+ + ++ SL++ YA +F A F I +K + SW+ ++ + +G
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 340 GREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYS 399
EA+ +FN+M+ P+ VL AC+ + +++G++ +++ +E +
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVST 303
Query: 400 CLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRL----HRNVK 444
LVD+ + +EAYA + P +DV W AL+S L HR+++
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRI---PRKDVVSWVALISGFTLNGMAHRSIE 351
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 248/421 (58%), Gaps = 4/421 (0%)
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACS 269
A+K+ + ++ ++WN +I GY + + L+ M + P++ + S L AC+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
R+ L VHS ++ G +N + ++L+ +YA CG + F + ++ W
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDY 389
M+TGF HG EAI +F+EM ++++PD F +L+ CSH GL++EGKE F M+R +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 390 NVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEIS 449
+++P HY +VDLLGRAG++ EAY I++M ++P+ +W +LLS+ R ++N +L EI+
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 450 AQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQ 509
Q L K YV LSNIY++ K+W S+ E M+H+
Sbjct: 357 IQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHR 413
Query: 510 FFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALA 569
F AGDTSH ++ IY L+ L ++ K G++ DT VL DV E KE+ L HSE+LALA
Sbjct: 414 FKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALA 473
Query: 570 FALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGY 629
+ ++ + PGT IRI KN+R+C DCH +K VSKL++R IIMRD RFH F DG+CSC Y
Sbjct: 474 YVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDY 533
Query: 630 W 630
W
Sbjct: 534 W 534
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLKACGDLLLREM 72
+N WN MI GY + + ++L + MLSF K + F++ L AC L
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKAL---KNMLSFTDIKPNKFSFASSLAACARLGDLHH 183
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
VH L++ G+E + + ++L+ +Y K GD+GT+R VF + D++ WN M++G+
Sbjct: 184 AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
+G A +A VF M + D T L LL+ C L+ GK G + R E
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLIS 231
+M+D+ + A +L E + ++ D V W SL+S
Sbjct: 304 HY-GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR-SGL 151
N +I +K G+ G A+ V +++ +WN M+ GYV+N + +A +M + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
+ + + L+AC L DL K VH ++ +SG + N ++++++D+Y C I +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMI-DSG-IELNAILSSALVDVYAKCGDIGTS 219
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
R++F + D WN++I+G+ G A + + +F +M PD +T + +L CS
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
L G K+ +G+ + R F+ P L + MV
Sbjct: 280 GLLEEG--------KEYFGLMS--------------------RRFSIQPK--LEHYGAMV 309
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
G G+ +EA + M I PD ++ ++LS+
Sbjct: 310 DLLGRAGRVKEAYELIESM---PIEPDVVIWRSLLSS 343
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 286/530 (53%), Gaps = 6/530 (1%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD++ ++ WN++I +C + ++L L+ M S G + ++ + + AC
Sbjct: 164 VFDEMPERDVASWNTVI---SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR 220
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
LL E G +H V G E D YV ++L+ MY K + AR VF KMP + L +WN+M
Sbjct: 221 LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSM 280
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ GYV G++ + + M G TT+ ++L AC +L GK +HGYV+R+
Sbjct: 281 IKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV- 339
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
++ + +V S+ID+Y C + A +F SWN +IS Y G F+ +E++
Sbjct: 340 -VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
QM G PD VT SVL ACS+++AL G +H + + + + ++L+ MY+ C
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
G+ A R FN IP K + SWTVM++ +G HG+ REA+ F+EM + PD AVL
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM-KLKP 425
SAC H+GL+DEG + F +M Y +EP HYSC++D+LGRAG+L EAY I +
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXX 485
N ++ + L SAC LH L + A+ L E P+ S Y+ L N+YA+ + W
Sbjct: 579 NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 486 XXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK 535
P S+ E++ V FFA D SH +++++Y L L+ ++
Sbjct: 639 KMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 255/471 (54%), Gaps = 15/471 (3%)
Query: 4 AQLIFDQI-VFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVL 61
A+ +F+ + + ++WNS++ GY+ ++ + + L +++ +L+ D+FT+P V+
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDT---LEVFKRLLNCSICVPDSFTFPNVI 114
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
KA G L +G +H LVV G DV V +SL+ MY KF + VFD+MP RD+
Sbjct: 115 KAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA 174
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWNT++S + ++GEA A +F M SG + ++ +SAC L+ L+ GK +H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V+ L +E+V ++++DMY CD + AR++F+ + K V+WNS+I GY G +
Sbjct: 235 VKKGFEL--DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKS 292
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+E+ +M I G P + T+ S+L ACSR LL G +H Y+++ + V SLI
Sbjct: 293 CVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLID 352
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
+Y CG A F++ SW VM++ + G +A+ ++++M+ + PD
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
FT+VL ACS +++GK+I ++ + +E S L+D+ + G EA+ +++
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 422 KLKPNEDV--WTALLSACRLHRNVK--LAEISAQKLFEMDPNKVSGYVCLS 468
P +DV WT ++SA H + L + + F + P+ V+ LS
Sbjct: 472 ---PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 189/364 (51%), Gaps = 8/364 (2%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR-DLTSWNTMMSGYVKNG 134
VH ++ GL DV + SLI++Y D +AR VF+ +R D+ WN++MSGY KN
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 135 EAGDAFVVFDHMRRSGL-VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
D VF + + V D T ++ A G L LG+ +H VV+ SG + +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVK-SGYVCD-VV 143
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
V +S++ MY + + ++F+ + +D SWN++IS + + G A + LELFG+M G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
P+ V++ + ACSR+ L G +H VKKG+ ++ V ++L+ MY C A
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
F ++P KSL +W M+ G+ G + + I N M+ + P + T++L ACS S
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSC-LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
+ GK I + R +V + +C L+DL + G+ + A T+ + K + W
Sbjct: 324 NLLHGKFIHGYVIR--SVVNADIYVNCSLIDLYFKCGEANLA-ETVFSKTQKDVAESWNV 380
Query: 433 LLSA 436
++S+
Sbjct: 381 MISS 384
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 329 bits (843), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 299/568 (52%), Gaps = 21/568 (3%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKF------GDMGTARLVFDKMPVRDLTS-WNTMM 127
++H V+++GL+ + N L L+F G + A+L+FD TS WN ++
Sbjct: 23 KIHSHVIINGLQHHPSIFNHL----LRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLI 78
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLV-GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
G+ + ++ + ++ M S + D T L +C + + +HG V+R SG
Sbjct: 79 RGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR-SG 137
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L ++ V S++ Y + A K+F+ + V+D VSWN +I + G Q L ++
Sbjct: 138 FL-DDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M G D T++++L +C+ +SAL +G +H V +LI MYA C
Sbjct: 197 KRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKC 256
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
GS A FN + + + +W M+ G+G+HG G EAIS F +M+ + P+ F +L
Sbjct: 257 GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
CSH GLV EG E F M+ +++ P HY C+VDL GRAG+L+ + I +
Sbjct: 317 LGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHED 376
Query: 427 EDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXX 486
+W LL +C++HRN++L E++ +KL +++ YV +++IY+A
Sbjct: 377 PVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKL 436
Query: 487 XXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSV 546
P +S+ E+ VH+F D H +S IY++L ++ + GY P+ S+
Sbjct: 437 IRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSN- 495
Query: 547 LYDVEAEVKEKML----WDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
+ ++ L HSE+LA+A+ L+ T GTT+RITKNLRVC DCH+ K VSK
Sbjct: 496 --RTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSK 553
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
+REII+RD RFHHF DGICSC YW
Sbjct: 554 AFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 148/292 (50%), Gaps = 22/292 (7%)
Query: 1 MPQAQLIFDQIVFKNSFL-WNSMIRGYACSAGGNSSS--RSLVLY-REMLSFGQKADNFT 56
+ AQL+FD S WN +IRG++ NSSS S++ Y R +LS + D FT
Sbjct: 55 LSHAQLLFDHFDSDPSTSDWNYLIRGFS-----NSSSPLNSILFYNRMLLSSVSRPDLFT 109
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP 116
+ F LK+C + + +HG V+ G D V SL+ Y G + A VFD+MP
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP 169
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
VRDL SWN M+ + G A ++ M G+ GD T++ALLS+C + L +G
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVM 229
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
+H + R + FV+N++IDMY C + A +F G+ +D ++WNS+I GY
Sbjct: 230 LHR--IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH 287
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
G + + F +M G P+ +T + +L CS H LVK+G
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCS-----------HQGLVKEG 328
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 273/479 (56%), Gaps = 8/479 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +F+ I +N W SMI GY + LVL+ M + +TY +
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYV---KNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ AC L G HG +V G+E + SL+ MY+K GD+ AR VF++ DL
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
W M+ GY NG +A +F M+ + + T+ ++LS CG + +L+LG++VHG
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
++ G N V N+++ MY C A+ +FE + KD V+WNS+ISG+ + G
Sbjct: 369 SIK-VGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIH 425
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV--GTS 298
+ L LF +M P+ VTV S+ AC+ + +L +GSS+H+Y VK G+ +++V GT+
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ YA CG A F+ I +K+ +W+ M+ G+G G ++ +F EML K P+
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
E FT++LSAC H+G+V+EGK+ F M +DYN P+T HY+C+VD+L RAG+L++A I
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ M ++P+ + A L C +H L EI +K+ ++ P+ S YV +SN+YA++ RW
Sbjct: 606 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 231/470 (49%), Gaps = 44/470 (9%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+L+FDQI + +LW M+R Y + S + LY ++ G + D+ + LKA
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLN---KESVEVVKLYDLLMKHGFRYDDIVFSKALKA 151
Query: 64 CGDLLLREMGIRVH-GLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C +L + G ++H LV V ++ V G L+ MY K G++ +A VF+ + +R++
Sbjct: 152 CTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVC 209
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W +M++GYVKN + V+F+ MR + ++G+ T L+ AC L L GK HG +V
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
++ LS+ + S++DMY C IS AR++F + D V W ++I GY G +
Sbjct: 270 KSGIELSS--CLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
L LF +M P+ VT+ SVL C I L LG SVH +K G +T V +L+ M
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHM 386
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA C A F +K + +W +++GF +G EA+ +F+ M +++TP+
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 363 TAVLSACSHSGLVDEGKEI-----------------------FY---------KMTRDYN 390
++ SAC+ G + G + FY ++ D
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 391 VEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPNEDVWTALLSAC 437
E T +S ++ G+ G + + M + KPNE +T++LSAC
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 157/300 (52%), Gaps = 6/300 (2%)
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
HG++ +GL D+ + L+S+Y FG ARLVFD++P D W M+ Y N E+
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 137 GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTN 196
+ ++D + + G D L AC +L DL GK +H +V+ S + V
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP---SFDNVVLT 180
Query: 197 SMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
++DMY C I A K+F + +++ V W S+I+GY K + L LF +M +
Sbjct: 181 GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
+E T +++ AC+++SAL G H LVK G +++ + TSL+ MY CG A R F
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 317 NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD 376
NE L WT M+ G+ +G EA+S+F +M G I P+ +VLS C GL++
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 161 LLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV 220
LLS C ++ L+ HG + N L + + ++ +Y + AR +F+ +
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNG--LMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 221 KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSV 280
D W ++ Y + +V++L+ + G D++ L AC+ + L G +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 281 HSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
H LVK + V T L+ MYA CG AH+ FN+I +++ WT M+ G+ +
Sbjct: 165 HCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
E + +FN M N+ +E + ++ AC+ + +GK F+ +E ++ +
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK-WFHGCLVKSGIELSSCLVTS 282
Query: 401 LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKL--FEMDP 458
L+D+ + G + A + N + +WTA++ + +V A QK+ E+ P
Sbjct: 283 LLDMYVKCGDISNA-RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 459 NKVS 462
N V+
Sbjct: 342 NCVT 345
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 279/504 (55%), Gaps = 9/504 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD + ++ WN+MI GY + N + L+++ M++ D+ T +L
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDA---LMMFDWMVNESVDLDHATIVSMLPV 227
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG L EMG VH LV L + V N+L++MYLK G M AR VFD+M RD+ +W
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
M++GY ++G+ +A + M+ G+ + T+ +L+S CGD + + GK +HG+ VR
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
++ ++ + S+I MY C + ++F G + T W+++I+G + L
Sbjct: 348 Q--QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
LF +M P+ T+ S+L A + ++ L ++H YL K G+ + T L+ +Y
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 304 ANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ CG+ AH+ FN I +K + W +++G+G+HG G A+ +F EM+ +TP+E
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNE 525
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
FT+ L+ACSHSGLV+EG +F M Y + HY+C+VDLLGRAG+LDEAY I
Sbjct: 526 ITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLIT 585
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
+ +P VW ALL+AC H NV+L E++A KLFE++P YV L+NIYAA RW
Sbjct: 586 TIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKD 645
Query: 480 XXXXXXXXXXXXXXXPPSYSFFEL 503
P +S E+
Sbjct: 646 MEKVRSMMENVGLRKKPGHSTIEI 669
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 228/442 (51%), Gaps = 11/442 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQK--ADNFTYPFVL 61
A+ +F+++ + +N +IR Y + + + ++ M+S G K D +TYPFV
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDA---ISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
KA G+L ++G+ VHG ++ D YV N+L++MY+ FG + AR VFD M RD+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWNTM+SGY +NG DA ++FD M + D T++++L CG L DL++G+ VH V
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
RL + V N++++MY C + AR +F+ + +D ++W +I+GY + G
Sbjct: 245 --EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
LEL M G P+ VT+ S++ C + G +H + V++ + + TSLIS
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA C R F+ W+ ++ G + +A+ +F M +++ P+
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
++L A + + + I +T+ + + LV + + G L+ A+ + +
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGI 481
Query: 422 KLK-PNEDV--WTALLSACRLH 440
+ K ++DV W AL+S +H
Sbjct: 482 QEKHKSKDVVLWGALISGYGMH 503
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 174/359 (48%), Gaps = 6/359 (1%)
Query: 81 VVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAF 140
V+ G ++ ++L Y G + AR +F++MP L S+N ++ YV+ G DA
Sbjct: 41 VITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAI 100
Query: 141 VVFDHMRRSGL--VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
VF M G+ V DG T + A G+L +KLG VHG ++R+ +++V N++
Sbjct: 101 SVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRS--WFGRDKYVQNAL 158
Query: 199 IDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDE 258
+ MY N + AR +F+ + +D +SWN++ISGY + G L +F M D
Sbjct: 159 LAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH 218
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE 318
T++S+L C + L +G +VH + +K G V +L++MY CG A F+
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 319 IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
+ + + +WT M+ G+ G A+ + M + + P+ +++S C + V++G
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 379 KEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
K + R V + L+ + + ++D + K + W+A+++ C
Sbjct: 339 KCLHGWAVRQ-QVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGC 395
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 202/435 (46%), Gaps = 55/435 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +A+ +FD++ ++ W MI GY + G+ + +L L R M G + + T +
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGY--TEDGDVEN-ALELCRLMQFEGVRPNAVTIASL 325
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ CGD L G +HG V + SD+ + SLISMY K + VF
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
W+ +++G V+N DA +F MRR + + T+ +LL A L DL+ +H Y
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKC 236
+ + +G +S+ + T ++ +Y C + A K+F G+ KD V W +LISGY
Sbjct: 446 LTK-TGFMSSLDAAT-GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
G L++F +M G P+E+T S L ACS HS LV++G
Sbjct: 504 GDGHNALQVFMEMVRSGVTPNEITFTSALNACS-----------HSGLVEEG-------- 544
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLAS---WTVMVTGFGIHGKGREAISIFNEMLGK 353
++++ F+ H K+LA +T +V G G+ EA +N +
Sbjct: 545 ---LTLF----RFMLEHY-------KTLARSNHYTCIVDLLGRAGRLDEA---YNLITTI 587
Query: 354 NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDL---LGRAG 409
P V+ A+L+AC V G+ K+ + +EP T +Y L ++ LGR
Sbjct: 588 PFEPTSTVWGALLAACVTHENVQLGEMAANKL---FELEPENTGNYVLLANIYAALGRWK 644
Query: 410 KLDEAYATIDNMKLK 424
+++ + ++N+ L+
Sbjct: 645 DMEKVRSMMENVGLR 659
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 296/536 (55%), Gaps = 6/536 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
MPQA+ I Q+ + WNS+I+GY + +L + +M++ G K+D + +
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNL---MYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ A G L G+ +H V+ G +S++ VGN+LI MY K F +M +DL
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW T+++GY +N +A +F + + + D + ++L A L + + K +H +
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
++R G L + + N ++D+Y C + A ++FE + KD VSW S+IS G
Sbjct: 513 ILRK-GLL--DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ +ELF +M G D V ++ +L A + +SAL G +H YL++KG+ + ++ +++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MYA CG A F+ I K L +T M+ +G+HG G+ A+ +F++M +N++PD
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
F A+L ACSH+GL+DEG+ M +Y +EP HY CLVD+LGRA + EA+ +
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXX 480
MK +P +VW ALL+ACR H ++ EI+AQ+L E++P V +SN++A + RW
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 481 XXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
P S+ E++ VH+F A D SH +S +IY KL ++ +L++
Sbjct: 810 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 238/454 (52%), Gaps = 16/454 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ + +F WN+MI Y + G +S +L LY M G ++P +LKA
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYV--SNGEPAS-ALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR-DLTS 122
C L G +H L+V G S ++ N+L+SMY K D+ AR +FD + D
Sbjct: 192 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN+++S Y +G++ + +F M +G + T+++ L+AC KLGK +H V+
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
++S S+ +V N++I MY C + A ++ + D V+WNSLI GY + +
Sbjct: 312 KSSTH-SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
LE F M G DEV++ S++ A R+S LL G +H+Y++K G+ N VG +LI M
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y+ C RAF + DK L SWT ++ G+ + EA+ +F ++ K + DE +
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
++L A S + KEI + R ++ T + LVD+ G+ + A +++K
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYGKCRNMGYATRVFESIK 548
Query: 423 LKPNEDV--WTALLSACRLHRNVKLAEISAQKLF 454
K DV WT+++S+ L+ N E A +LF
Sbjct: 549 GK---DVVSWTSMISSSALNGN----ESEAVELF 575
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 220/427 (51%), Gaps = 11/427 (2%)
Query: 1 MPQAQLIFDQIVFK-NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPF 59
+ A+ +FD K ++ LWNS++ Y+ S S +L L+REM G +++T
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSG---KSLETLELFREMHMTGPAPNSYTIVS 289
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLES-DVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
L AC ++G +H V+ S ++YV N+LI+MY + G M A + +M
Sbjct: 290 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D+ +WN+++ GYV+N +A F M +G D +M ++++A G L +L G +H
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
YV+++ +N V N++IDMY C+ + F + KD +SW ++I+GY +
Sbjct: 410 AYVIKHG--WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ LELF + DE+ + S+L A S + ++L+ +H ++++KG ++T +
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNE 526
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ +Y C + A R F I K + SWT M++ ++G EA+ +F M+ ++ D
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 359 EGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+LSA + +++G+EI Y + + + +E + +VD+ G L A A
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAV 644
Query: 418 IDNMKLK 424
D ++ K
Sbjct: 645 FDRIERK 651
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 164/317 (51%), Gaps = 7/317 (2%)
Query: 56 TYPFVLKACGDLLLREMGIRVHGLV--VVDGLESDVYVGNSLISMYLKFGDMGTARLVFD 113
+ +VL+ CG G ++H + E D G L+ MY K G + A VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFD 140
Query: 114 KMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKL 173
+MP R +WNTM+ YV NGE A ++ +MR G+ ++ ALL AC L D++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISG 232
G +H +V+ + F+ N+++ MY D +S AR+LF+G K D V WNS++S
Sbjct: 201 GSELHSLLVKLG--YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG-YGM 291
Y G + + LELF +M + G P+ T++S L AC S LG +H+ ++K +
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
V +LI+MY CG A R ++ + + +W ++ G+ + +EA+ F++M+
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 352 GKNITPDEGVFTAVLSA 368
DE T++++A
Sbjct: 379 AAGHKSDEVSMTSIIAA 395
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 288/541 (53%), Gaps = 21/541 (3%)
Query: 102 FGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG------DG 155
FGD+ A +F +P WN ++ G+ + AF + M + D
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYC-NCDFISGARKL 214
T L AC + +H + R LS + + +++D Y N D IS A KL
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRG--LSADSLLCTTLLDAYSKNGDLIS-AYKL 166
Query: 215 FEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISAL 274
F+ + V+D SWN+LI+G A + +EL+ +M G EVTV++ LGACS + +
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 275 LLGSSV-HSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP-DKSLASWTVMVT 332
G ++ H Y N V + I MY+ CG A++ F + KS+ +W M+T
Sbjct: 227 KEGENIFHGY-----SNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMIT 281
Query: 333 GFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVE 392
GF +HG+ A+ IF+++ I PD+ + A L+AC H+GLV+ G +F M VE
Sbjct: 282 GFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVE 340
Query: 393 PTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQK 452
HY C+VDLL RAG+L EA+ I +M + P+ +W +LL A ++ +V++AEI++++
Sbjct: 341 RNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASRE 400
Query: 453 LFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFA 512
+ EM N +V LSN+YAA+ RW P S+ E +H+F+
Sbjct: 401 IKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYN 460
Query: 513 GDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFAL 572
D SH+Q +IY K+ ++ ++++ GY+ T VL+D+ E KE L HSE+LA+A+ L
Sbjct: 461 SDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGL 520
Query: 573 I---NTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGY 629
+ + +R+ NLR+C DCH V K +SK+ REII+RD RFH F+DG CSC +
Sbjct: 521 MMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDF 580
Query: 630 W 630
W
Sbjct: 581 W 581
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 21/317 (6%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ------KADNFTYPFVLKACGDLLLREM 72
WN++IRG+A G + S + YR ML + D T F LKAC L
Sbjct: 71 WNAIIRGFA---GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
++H + GL +D + +L+ Y K GD+ +A +FD+MPVRD+ SWN +++G V
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV-HGYVVRNSGRLSNN 191
A +A ++ M G+ T++A L AC L D+K G+ + HGY ++N
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-------NDN 240
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLA-VKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
V+N+ IDMY C F+ A ++FE K V+WN++I+G+ G A + LE+F ++
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
G PD+V+ ++ L AC + G SV + + KG N ++ + + G
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 311 CAHR---AFNEIPDKSL 324
AH + + IPD L
Sbjct: 361 EAHDIICSMSMIPDPVL 377
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FD++ ++ WN++I G GN +S ++ LY+ M + G + T L A
Sbjct: 163 AYKLFDEMPVRDVASWNALIAGL---VSGNRASEAMELYKRMETEGIRRSEVTVVAALGA 219
Query: 64 CGDLLLREMGIRVHGLVVVDGLESD-VYVGNSLISMYLKFGDMGTARLVFDKMP-VRDLT 121
C L G G + G +D V V N+ I MY K G + A VF++ + +
Sbjct: 220 CSHL-----GDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVV 274
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+WNTM++G+ +GEA A +FD + +G+ D + LA L+AC G +G
Sbjct: 275 TWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTAC-----RHAGLVEYGLS 329
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG-------LAVKDTVSWNSLISGYE 234
V N+ V +M C D +S A +L E + D V W SL+ E
Sbjct: 330 VFNNMACKG---VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASE 386
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 288/548 (52%), Gaps = 43/548 (7%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRV 76
++N M++ A G S ++ L L+ E+ G DNFT P VLK+ G L G +V
Sbjct: 12 LMYNKMLKSLA---DGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
HG V GLE D YV NSL+ MY G + VFD+MP RD+ SWN ++S YV NG
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 137 GDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
DA VF M + S L D T+++ LSAC L +L++G+ ++ +VV + +
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT---EFEMSVRIG 185
Query: 196 NSMIDMYCNCD-------------------------------FISGARKLFEGLAVKDTV 224
N+++DM+C C I AR LFE VKD V
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 225 SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYL 284
W ++++GY + + LELF M G PD ++S+L C++ AL G +H Y+
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 285 VKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAI 344
+ ++ VGT+L+ MYA CG A F EI ++ ASWT ++ G ++G A+
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 345 SIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDL 404
++ EM + D F AVL+AC+H G V EG++IF+ MT +NV+P + H SCL+DL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 405 LGRAGKLDEAYATIDNMKLKPNE---DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKV 461
L RAG LDEA ID M+ + +E V+ +LLSA R + NVK+AE A+KL +++ +
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 462 SGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDT--SHQQ 519
S + L+++YA+ RW P S E++ + H+F GD SH +
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 520 SDDIYAKL 527
D+I + L
Sbjct: 546 MDEINSML 553
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 41/349 (11%)
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
L +N M+ +F +R GL D T+ +L + G L + G+ VHG
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
Y V+ L + +V+NS++ MY + I K+F+ + +D VSWN LIS Y G
Sbjct: 71 YAVKAG--LEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 240 FQVLELFGQMFIGGAVP-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ +F +M + DE T++S L ACS + L +G ++ ++V + + M+ +G +
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNA 187
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGR----------------- 341
L+ M+ CG A F+ + DK++ WT MV FG GR
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV--FGYVSTGRIDEARVLFERSPVKDVV 245
Query: 342 ----------------EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
EA+ +F M I PD V ++L+ C+ +G +++GK I +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-HGY 304
Query: 386 TRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
+ V + LVD+ + G ++ A +K + WT+L+
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLI 352
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSR----------------------- 37
+ +A+ +FD + KN W SM+ GY S G +R
Sbjct: 198 LDKARAVFDSMRDKNVKCWTSMVFGYV-STGRIDEARVLFERSPVKDVVLWTAMMNGYVQ 256
Query: 38 ------SLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYV 91
+L L+R M + G + DNF +L C E G +HG + + + D V
Sbjct: 257 FNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV 316
Query: 92 GNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL 151
G +L+ MY K G + TA VF ++ RD SW +++ G NG +G A ++ M G+
Sbjct: 317 GTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGV 376
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
D T +A+L+AC + G+ + + +E + +ID+ C + A
Sbjct: 377 RLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS-CLIDLLCRAGLLDEA 435
Query: 212 RKLFEGL 218
+L + +
Sbjct: 436 EELIDKM 442
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 288/536 (53%), Gaps = 8/536 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FDQ+ ++ WN+MI GYA + GN S +LYR M G + D T+ L
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYA--SVGNMSEILKLLYR-MRGDGLRPDQQTFGASLSV 254
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
G + EMG +H +V G + D+++ +LI+MYLK G + V + +P +D+ W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
M+SG ++ G A A +VF M +SG + +++++C L LG +VHGYV+R
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ L NS+I MY C + + +FE + +D VSWN++ISGY + + L
Sbjct: 375 HGYTLDTPAL--NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKAL 432
Query: 244 ELFGQM-FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
LF +M F D TV+S+L ACS AL +G +H +++ + V T+L+ M
Sbjct: 433 LLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDM 492
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y+ CG A R F+ I K + SW +++ G+G HGKG A+ I++E L + P+ +F
Sbjct: 493 YSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIF 552
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
AVLS+CSH+G+V +G +IF M RD+ VEP H +C+VDLL RA ++++A+
Sbjct: 553 LAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENF 612
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
+P+ DV +L ACR + ++ +I + + E+ P YV L + +AA KRW
Sbjct: 613 TRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSE 672
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVG 538
P +S E+N FF TSH SDD + LK L+ ++ + G
Sbjct: 673 SWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 219/418 (52%), Gaps = 13/418 (3%)
Query: 39 LVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISM 98
L + ML+ D FT+P +LKAC L G+ +H V+V+G SD Y+ +SL+++
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 99 YLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTM 158
Y KFG + AR VF++M RD+ W M+ Y + G G+A + + MR G+ T+
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 159 LALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGL 218
L +LS ++ L+ +H + V + V NSM+++YC CD + A+ LF+ +
Sbjct: 151 LEMLSGVLEITQLQ---CLHDFAVIYG--FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM 205
Query: 219 AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGS 278
+D VSWN++ISGY G ++L+L +M G PD+ T + L + L +G
Sbjct: 206 EQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 279 SVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHG 338
+H +VK G+ ++ + T+LI+MY CG ++R IP+K + WTVM++G G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 339 KGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTH 397
+ +A+ +F+EML +V+++C+ G D G + Y + Y ++ T
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD--TPA 383
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE 455
+ L+ + + G LD++ + M + + W A++S +NV L + A LFE
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG--YAQNVDLCK--ALLLFE 436
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 158/328 (48%), Gaps = 18/328 (5%)
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
+N+ ++ +G+ F M + L+ D T +LL AC L L G ++H V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
N S++ ++++S++++Y ++ ARK+FE + +D V W ++I Y + G +
Sbjct: 74 VNG--FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
L +M G P VT++ +L I+ L +H + V G+ + AV S++++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y C A F+++ + + SW M++G+ G E + + M G + PD+ F
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTR---DYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
A LS ++ G+ + ++ + D ++ T L+ + + GK + +Y ++
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA----LITMYLKCGKEEASYRVLE 304
Query: 420 NMKLKPNEDV--WTALLSAC-RLHRNVK 444
+ PN+DV WT ++S RL R K
Sbjct: 305 TI---PNKDVVCWTVMISGLMRLGRAEK 329
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 111/217 (51%), Gaps = 5/217 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM-LSFGQKADNFTYPF 59
+ ++ +IF+++ ++ WN++I GYA + ++L+L+ EM Q+ D+FT
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQNV---DLCKALLLFEEMKFKTVQQVDSFTVVS 453
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+L+AC +G +H +V+ + V +L+ MY K G + A+ FD + +D
Sbjct: 454 LLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKD 513
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ SW +++GY +G+ A ++ SG+ + LA+LS+C ++ G +
Sbjct: 514 VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFS 573
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
+VR+ G N+E + ++D+ C I A K ++
Sbjct: 574 SMVRDFGVEPNHEHLA-CVVDLLCRAKRIEDAFKFYK 609
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%)
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
+ T +NS I+ G QVL F M +PD T S+L AC+ + L G S
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
+H ++ G+ + + +SL+++YA G A + F E+ ++ + WT M+ + G
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 340 GREAISIFNEMLGKNITPDEGVFTAVLS 367
EA S+ NEM + I P +LS
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLS 155
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 287/574 (50%), Gaps = 42/574 (7%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+AQ I + + WN +I YA + Y+ M+S G + D FTYP VLK
Sbjct: 96 EAQSIIENSDILHPLPWNVLIASYA---KNELFEEVIAAYKRMVSKGIRPDAFTYPSVLK 152
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
ACG+ L G VHG + V +S +YV N+LISMY +F +MG AR +FD+M RD S
Sbjct: 153 ACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS 212
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGL--------------------VG--------- 153
WN +++ Y G +AF +FD M SG+ VG
Sbjct: 213 WNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Query: 154 ------DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
D M+ L AC + ++LGK +HG + +S +N V N++I MY C
Sbjct: 273 NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN--VRNTLITMYSKCKD 330
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
+ A +F +WNS+ISGY + + + L +M + G P+ +T+ S+L
Sbjct: 331 LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPL 390
Query: 268 CSRISALLLGSSVHSYLVK-KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
C+RI+ L G H Y+++ K + T + SL+ +YA G + A + + + + +
Sbjct: 391 CARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVT 450
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
+T ++ G+G G+G A+++F EM I PD AVLSACSHS LV EG+ +F KM
Sbjct: 451 YTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQ 510
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
+Y + P H+SC+VDL GRAG L +A I NM KP+ W LL+AC +H N ++
Sbjct: 511 CEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIG 570
Query: 447 EISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKM 506
+ +A+KL EM P YV ++N+YAA W P ++ + +
Sbjct: 571 KWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSG 630
Query: 507 VHQFFAGDTSHQQSDDIYAKLKDLNEQLK-KVGY 539
F GDTS ++ + Y L LN+ +K GY
Sbjct: 631 FSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGY 664
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 182/410 (44%), Gaps = 38/410 (9%)
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+L AC D+ G++VH + G+E + L++ Y F A+ + + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
WN +++ Y KN + + M G+ D T ++L ACG+ +D+ G+ VHG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+ +S + ++ +V N++I MY + AR+LF+ + +D VSWN++I+ Y G
Sbjct: 169 SIEVSSYK--SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 240 FQVLELFGQMFIGGA--------------------------------VP---DEVTVISV 264
+ ELF +M+ G P D V +I
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L ACS I A+ LG +H + Y V +LI+MY+ C A F + + SL
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
+W +++G+ K EA + EML P+ ++L C+ + GKE
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
+ R + T ++ LVD+ ++GK+ A D M K +E +T+L+
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLI 455
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 7/246 (2%)
Query: 133 NGEAGDAFVVFDHMR--RSGLVGDGTTM---LALLSACGDLMDLKLGKAVHGYVVRNSGR 187
+G DAF F +R S V D + +LLSAC D+ G VH + + S
Sbjct: 16 HGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCI--SSG 73
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG 247
+ + + ++ Y + + A+ + E + + WN LI+ Y K +V+ +
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+M G PD T SVL AC + G VH + Y + V +LISMY
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFR 193
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
+ A R F+ + ++ SW ++ + G EA +F++M + + +
Sbjct: 194 NMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISG 253
Query: 368 ACSHSG 373
C +G
Sbjct: 254 GCLQTG 259
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 280/516 (54%), Gaps = 11/516 (2%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
++ F +N++I G+ + S ++ YREM + G D +T+P +LK + L ++
Sbjct: 124 RDVFGYNALISGFVVNG---SPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS-WNTMMSGYVK 132
+VHGL G +SD YVG+ L++ Y KF + A+ VFD++P RD + WN +++GY +
Sbjct: 181 -KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
DA +VF MR G+ T+ ++LSA D+ G+++HG V+ ++
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS--GSDI 297
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
V+N++IDMY ++ A +FE + +D +WNS++ ++ CG L LF +M
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS 357
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY----GMNTAVGTSLISMYANCGS 308
G PD VT+ +VL C R+++L G +H Y++ G N + SL+ MY CG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 309 FLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
A F+ + K ASW +M+ G+G+ G A+ +F+ M + PDE F +L A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNED 428
CSHSG ++EG+ +M YN+ PT+ HY+C++D+LGRA KL+EAY + + N
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 429 VWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXX 488
VW ++LS+CRLH N LA ++ ++L E++P GYV +SN+Y ++
Sbjct: 538 VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMR 597
Query: 489 XXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIY 524
P S+ L VH FF G+ +H + I+
Sbjct: 598 QQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 171/357 (47%), Gaps = 9/357 (2%)
Query: 73 GIRVHGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
G ++HG +V G L+ G SL++MY K G M A LVF RD+ +N ++SG+V
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFV 137
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
NG DA + MR +G++ D T +LL D M+L K VHG + ++
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLG--FDSD 194
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGAFQVLELFGQMF 250
+V + ++ Y + A+K+F+ L + D+V WN+L++GY + L +F +M
Sbjct: 195 CYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMR 254
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
G T+ SVL A + + G S+H VK G G + V +LI MY
Sbjct: 255 EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLE 314
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
A+ F + ++ L +W ++ G +++F ML I PD T VL C
Sbjct: 315 EANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCG 374
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTH---YSCLVDLLGRAGKLDEAYATIDNMKLK 424
+ +G+EI M + +++ ++ L+D+ + G L +A D+M++K
Sbjct: 375 RLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
T +A L C D G+ +HG++VR G L ++ S+++MY C + A +F
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRK-GFLDDSPRAGTSLVNMYAKCGLMRRAVLVF 119
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
G + +D +N+LISG+ G +E + +M G +PD+ T S+L S L
Sbjct: 120 GG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELS 177
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGF 334
VH K G+ + VG+ L++ Y+ S A + F+E+PD+ + W +V G+
Sbjct: 178 DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
+ +A+ +F++M + + T+VLSA + SG +D G+ I + +
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI-HGLAVKTGSGSD 296
Query: 395 TTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ L+D+ G++ L+EA + + M
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAM 323
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 31/247 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSM--IRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYP 58
+ +A IF+ + ++ F WNS+ + Y G +L L+ ML G + D T
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG-----TLALFERMLCSGIRPDIVTLT 367
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGL----ESDVYVGNSLISMYLKFGDMGTARLVFDK 114
VL CG L G +HG ++V GL S+ ++ NSL+ MY+K GD+ AR+VFD
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDS 427
Query: 115 MPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLG 174
M V+D SWN M++GY A +F M R+G+ D T + LL AC
Sbjct: 428 MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSH------- 480
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMI--DMY-CNCDFISGARKLFEG--LAVK-----DTV 224
G++ L+ E V N + D Y C D + A KL E LA+ + V
Sbjct: 481 ---SGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 225 SWNSLIS 231
W S++S
Sbjct: 538 VWRSILS 544
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 302/556 (54%), Gaps = 16/556 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQK---ADNFTYPFV 60
++ +FD V +N +WN+MI Y + S+ L+ E + G K +D TY
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYV---QNDCLVESIELFLE--AIGSKEIVSDEVTYLLA 324
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
A L E+G + HG V + E + + NSL+ MY + G + + VF M RD+
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDV 384
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWNTM+S +V+NG + ++ M++ G D T+ ALLSA +L + ++GK H +
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG--LAVKDTVSWNSLISGYEKCGG 238
++R + E + + +IDMY I ++KLFEG A +D +WNS+ISGY + G
Sbjct: 445 LIRQGIQF---EGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ +F +M P+ VTV S+L ACS+I ++ LG +H + +++ N V ++
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASA 561
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ MY+ G+ A F++ +++ ++T M+ G+G HG G AIS+F M I PD
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPD 621
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
F AVLSACS+SGL+DEG +IF +M YN++P++ HY C+ D+LGR G+++EAY +
Sbjct: 622 AITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV 681
Query: 419 DNMKLKPN-EDVWTALLSACRLHRNVKLAEISAQKLFEMDPNK-VSGY-VCLSNIYAAEK 475
+ + N ++W +LL +C+LH ++LAE +++L + D K SGY V LSN+YA E+
Sbjct: 682 KGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQ 741
Query: 476 RWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK 535
+W S E+ V+ F + D H S +IY + L + ++
Sbjct: 742 KWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Query: 536 KVGYMPDTSSVLYDVE 551
++ +V +E
Sbjct: 802 GDSFLTTLPTVTPSLE 817
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 216/483 (44%), Gaps = 36/483 (7%)
Query: 2 PQ-AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ--KADNFTYP 58
PQ A+ +FD I + LWN++I G+ C+ N +L+ Y M D +TY
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTIIIGFICN---NLPHEALLFYSRMKKTAPFTNCDAYTYS 111
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKF------GDMGTARLVF 112
LKAC + + G VH ++ S V NSL++MY+ + R VF
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLK 172
D M +++ +WNT++S YVK G +A F M R + + + + A +K
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
+G +++ + FV +S I MY I +R++F+ ++ WN++I
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 233 YEKCGGAFQVLELFGQMFIGGA--VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYG 290
Y + + +ELF + IG V DEVT + A S + + LG H ++ K
Sbjct: 292 YVQNDCLVESIELFLEA-IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRE 350
Query: 291 MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM 350
+ + SL+ MY+ CGS + F + ++ + SW M++ F +G E + + EM
Sbjct: 351 LPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM 410
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD-YNVEPTTTHYSCLVDLLGRAG 409
+ D TA+LSA S+ + GK+ + R E ++ L+D+ ++G
Sbjct: 411 QKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY---LIDMYSKSG 467
Query: 410 ------KLDE--AYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMD--PN 459
KL E YA D + W +++S + + + + +K+ E + PN
Sbjct: 468 LIRISQKLFEGSGYAERD-------QATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 460 KVS 462
V+
Sbjct: 521 AVT 523
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 31/362 (8%)
Query: 94 SLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG 153
S +S + G+ AR +FD +P WNT++ G++ N +A + + M+++
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 154 --DGTTMLALLSACGDLMDLKLGKAVHGYVVR---NSGRLSNNEFVTNSMIDMYCNC--- 205
D T + L AC + +LK GKAVH +++R NS R+ V NS+++MY +C
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV-----VHNSLMNMYVSCLNA 158
Query: 206 ------DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEV 259
D + RK+F+ + K+ V+WN+LIS Y K G + FG M P V
Sbjct: 159 PDCFEYDVV---RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPV 215
Query: 260 TVISVLGACSRISALLLGSSVHSYLVKKG--YGMNTAVGTSLISMYANCGSFLCAHRAFN 317
+ ++V A S ++ + + ++K G Y + V +S ISMYA G + R F+
Sbjct: 216 SFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD 275
Query: 318 EIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG-KNITPDEGVFTAVLSACSHSGLVD 376
++++ W M+ + + E+I +F E +G K I DE + SA S V+
Sbjct: 276 SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335
Query: 377 EGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALL 434
G++ +++++ P S +V + R G + +++ +M+ DV W ++
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMR---ERDVVSWNTMI 391
Query: 435 SA 436
SA
Sbjct: 392 SA 393
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 286/534 (53%), Gaps = 7/534 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +F +V K +WN+M+ YA + G S+ L L+ M D+FT V+
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSA---LDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C L L G VH + ++S + ++L+++Y K G A LVF M +D+ +
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRS--GLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
W +++SG KNG+ +A VF M+ L D M ++ +AC L L+ G VHG
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++ L N FV +S+ID+Y C A K+F ++ ++ V+WNS+IS Y +
Sbjct: 502 MIKTG--LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPE 559
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
++LF M G PD V++ SVL A S ++LL G S+H Y ++ G +T + +LI
Sbjct: 560 LSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALI 619
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY CG A F ++ KSL +W +M+ G+G HG A+S+F+EM +PD+
Sbjct: 620 DMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
F +++SAC+HSG V+EGK IF M +DY +EP HY+ +VDLLGRAG L+EAY+ I
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKA 739
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXX 480
M ++ + +W LLSA R H NV+L +SA+KL M+P + S YV L N+Y
Sbjct: 740 MPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEA 799
Query: 481 XXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQL 534
P S+ E++ + FF+G +S +I+ L L +
Sbjct: 800 AKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 211/450 (46%), Gaps = 29/450 (6%)
Query: 26 YACSAGGNSSSRSLVL---YREMLSFGQKADN--------FTYPFVLKACGDLLLREMGI 74
Y A NS R+L+ Y + L K D FT+P +LKAC L G
Sbjct: 21 YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFD-------KMPVRDLTSWNTMM 127
+HG VVV G D ++ SL++MY+K G + A VFD + RD+T WN+M+
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKL--GKAVHGYVVRNS 185
GY K + F M G+ D ++ ++S + + GK +HG+++RNS
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGAFQVLE 244
L + F+ ++IDMY A ++F + K + V WN +I G+ G L+
Sbjct: 201 --LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
L+ + LGACS+ G +H +VK G + V TSL+SMY+
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 305 NCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTA 364
CG A F+ + DK L W MV + + G A+ +F M K++ PD +
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
V+S CS GL + GK + ++ + ++ T+T S L+ L + G +AY +M+ K
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 425 PNEDVWTALLSACRLHRNVKLAEISAQKLF 454
+ W +L+S L +N K E A K+F
Sbjct: 438 -DMVAWGSLISG--LCKNGKFKE--ALKVF 462
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 212/437 (48%), Gaps = 15/437 (3%)
Query: 18 LWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA-CGD-LLLREMGIR 75
+WNSMI GY + +R ML FG + D F+ V+ C + RE G +
Sbjct: 135 VWNSMIDGYF---KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQ 191
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR-DLTSWNTMMSGYVKNG 134
+HG ++ + L++D ++ +LI MY KFG A VF ++ + ++ WN M+ G+ +G
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ ++ + + + T+ L AC + G+ +H VV+ L N+ +V
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG--LHNDPYV 309
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
S++ MY C + A +F + K WN++++ Y + + L+LFG M
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
+PD T+ +V+ CS + G SVH+ L K+ + + ++L+++Y+ CG A+
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN--ITPDEGVFTAVLSACSHS 372
F + +K + +W +++G +GK +EA+ +F +M + + PD + T+V +AC+
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
+ G ++ M + V S L+DL + G + A +M + N W +
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVG-SSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNS 547
Query: 433 LLSACRLHRNVKLAEIS 449
++S C N L E+S
Sbjct: 548 MIS-CYSRNN--LPELS 561
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 192/426 (45%), Gaps = 44/426 (10%)
Query: 2 PQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ--KADNFTYPF 59
P A L+F + K+ W S+I G C G +L ++ +M K D+
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGL-CKNG--KFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
V AC L G++VHG ++ GL +V+VG+SLI +Y K G A VF M +
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN 541
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ +WN+M+S Y +N + +F+ M G+ D ++ ++L A L GK++HG
Sbjct: 542 MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 601
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
Y +R + ++ + N++IDMY C F A +F+ + K ++WN +I GY G
Sbjct: 602 YTLRLG--IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
L LF +M G PD+VT +S++ AC+ + G ++ ++ K+ YG+
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM-KQDYGIEPN----- 713
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ YAN MV G G EA S M I D
Sbjct: 714 MEHYAN------------------------MVDLLGRAGLLEEAYSFIKAM---PIEADS 746
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT-THYSCLVDLLGRAGKLDEAYATI 418
++ +LSA V+ G K+ R +EP + Y L++L AG +EA +
Sbjct: 747 SIWLCLLSASRTHHNVELGILSAEKLLR---MEPERGSTYVQLINLYMEAGLKNEAAKLL 803
Query: 419 DNMKLK 424
MK K
Sbjct: 804 GLMKEK 809
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 283/537 (52%), Gaps = 9/537 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +F+ + KN W +++ GY +A ++ L+ M FG K D + +L +
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNA---LHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C L G +VH + L +D YV NSLI MY K + AR VFD D+ +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 124 NTMMSGYVKNG---EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
N M+ GY + G E +A +F MR + T ++LL A L L L K +HG
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+ + L+ + F +++ID+Y NC + +R +F+ + VKD V WNS+ +GY +
Sbjct: 480 MFKYG--LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE 537
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ L LF ++ + PDE T +++ A ++++ LG H L+K+G N + +L+
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MYA CGS AH+AF+ + + W +++ + HG+G++A+ + +M+ + I P+
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
F VLSACSH+GLV++G + F M R + +EP T HY C+V LLGRAG+L++A I+
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXX 480
M KP VW +LLS C NV+LAE +A+ DP + LSNIYA++ W
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 481 XXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
P S+ +NK VH F + D SH +++ IY L DL Q++ V
Sbjct: 777 KKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 222/441 (50%), Gaps = 13/441 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPF 59
M A+ +F+++ +N W++M+ AC+ G SLV++ E + + N +
Sbjct: 95 MVYARKVFEKMPERNLVSWSTMVS--ACNHHG-IYEESLVVFLEFWRTRKDSPNEYILSS 151
Query: 60 VLKACGDL--LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
++AC L R M ++ +V G + DVYVG LI YLK G++ ARLVFD +P
Sbjct: 152 FIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
+ +W TM+SG VK G + + +F + +V DG + +LSAC L L+ GK +
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
H +++R L + + N +ID Y C + A KLF G+ K+ +SW +L+SGY++
Sbjct: 272 HAHILRYG--LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ +ELF M G PD S+L +C+ + AL G+ VH+Y +K G ++ V
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF---GIHGKGREAISIFNEMLGKN 354
SLI MYA C A + F+ + + M+ G+ G + EA++IF +M +
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 355 ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
I P F ++L A + + K+I M + Y + S L+D+ L ++
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 415 YATIDNMKLKPNEDVWTALLS 435
D MK+K + +W ++ +
Sbjct: 509 RLVFDEMKVK-DLVIWNSMFA 528
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 193/372 (51%), Gaps = 16/372 (4%)
Query: 55 FTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDK 114
F L+A DLL + VHG ++V GLE D Y+ N LI++Y + G M AR VF+K
Sbjct: 47 FARLLQLRASDDLLHYQN--VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 115 MPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLA-LLSAC------GD 167
MP R+L SW+TM+S +G ++ VVF R+ +L+ + AC G
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 168 LMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWN 227
M +L ++V++ + +V +ID Y I AR +F+ L K TV+W
Sbjct: 165 WMVFQL----QSFLVKSG--FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT 218
Query: 228 SLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKK 287
++ISG K G ++ L+LF Q+ VPD + +VL ACS + L G +H+++++
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 288 GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIF 347
G M+ ++ LI Y CG + AH+ FN +P+K++ SWT +++G+ + +EA+ +F
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 348 NEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
M + PD +++L++C+ + G ++ + T N+ + + L+D+ +
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQV-HAYTIKANLGNDSYVTNSLIDMYAK 397
Query: 408 AGKLDEAYATID 419
L +A D
Sbjct: 398 CDCLTDARKVFD 409
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ ++L+FD++ K+ +WNSM GY + + +L L+ E+ ++ D FT+ +
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQS---ENEEALNLFLELQLSRERPDEFTFANM 561
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ A G+L ++G H ++ GLE + Y+ N+L+ MY K G A FD RD+
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
WN+++S Y +GE A + + M G+ + T + +LSAC ++ G
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD-TVSWNSLISGYEKCG 237
++R +V M+ + ++ AR+L E + K + W SL+SG K G
Sbjct: 682 MLRFGIEPETEHYVC--MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 332/664 (50%), Gaps = 47/664 (7%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSF-GQKADNFTYPFVLKACG 65
+FD+I ++ WN+++ S ++ L+ EM G D+FT +L +C
Sbjct: 240 LFDEIPQRDVASWNTVVSSLV---KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 66 D--LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT-- 121
D +LLR G +HG + GL ++ V N+LI Y KF DM +++ M +D
Sbjct: 297 DSSVLLR--GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 122 -----------------------------SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
++N +M+G+ +NG A +F M + G+
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
++ + + ACG + + K+ + +HG+ ++ N + +++DM C+ ++ A
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAF--NPCIQTALLDMCTRCERMADAE 472
Query: 213 KLFEGLA--VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACS 269
++F+ + + + S+I GY + G + + LF + + DEV++ +L C
Sbjct: 473 EMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCG 532
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
+ +G +H Y +K GY + ++G SLISMYA C A + FN + + + SW
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNS 592
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC--SHSGLVDEGKEIFYKMTR 387
+++ + + G EA+++++ M K I PD T V+SA + S + +++F M
Sbjct: 593 LISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKT 652
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAE 447
Y++EPTT HY+ V +LG G L+EA TI++M ++P V ALL +CR+H N +A+
Sbjct: 653 IYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAK 712
Query: 448 ISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMV 507
A+ + P S Y+ SNIY+A W P+ S+ +
Sbjct: 713 RVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKI 772
Query: 508 HQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLA 567
H F A DTSH Q DIY L+ L + KVGY P+T VL +V+ +K+ L+ HS +LA
Sbjct: 773 HSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLA 832
Query: 568 LAFALINTGP-GTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSC 626
+ + ++++ G +R+ KN+ +C DCH K +S ++ REI++RD FHHF +G CSC
Sbjct: 833 VTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSC 892
Query: 627 GGYW 630
W
Sbjct: 893 RDLW 896
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 227/482 (47%), Gaps = 53/482 (10%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVL 61
+A L+F + + ++I G++ N +L ++ M G + + +T+ +L
Sbjct: 132 EAILVFVSLSSPTVVSYTALISGFS---RLNLEIEALKVFFRMRKAGLVQPNEYTFVAIL 188
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA----RLVFDKMPV 117
AC + +GI++HGL+V G + V+V NSL+S+Y K D G++ +FD++P
Sbjct: 189 TACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK--DSGSSCDDVLKLFDEIPQ 246
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGDLMDLKLGKA 176
RD+ SWNT++S VK G++ AF +F M R G D T+ LLS+C D L G+
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 177 VHGYVVR---------NSG--------------------RLSNNEFVTNSMIDMYCNCDF 207
+HG +R N+ ++ + MI Y +
Sbjct: 307 LHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
+ A ++F + K+T+++N+L++G+ + G + L+LF M G + ++ S + A
Sbjct: 367 VDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDA 426
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP---DKSL 324
C +S + +H + +K G N + T+L+ M C A F++ P D S
Sbjct: 427 CGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSK 486
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEML-GKNITPDEGVFTAVLSACSHSGLVDEGKEIF- 382
A+ T ++ G+ +G +A+S+F+ L + + DE T +L+ C G + G +I
Sbjct: 487 AT-TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHC 545
Query: 383 YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLH 440
Y + Y + + + L+ + + D+A + M+ DV W +L+S L
Sbjct: 546 YALKAGYFSDISLG--NSLISMYAKCCDSDDAIKIFNTMR---EHDVISWNSLISCYILQ 600
Query: 441 RN 442
RN
Sbjct: 601 RN 602
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 173/375 (46%), Gaps = 48/375 (12%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
E +GN+LIS YLK G A LVF + + S+ ++SG+ + +A VF
Sbjct: 111 EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFR 170
Query: 146 MRRSGLVGDGT-TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMY-- 202
MR++GLV T +A+L+AC + LG +HG +V+ SG L N+ FV+NS++ +Y
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVK-SGFL-NSVFVSNSLMSLYDK 228
Query: 203 ---CNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM-FIGGAVPDE 258
+CD KLF+ + +D SWN+++S K G + + +LF +M + G D
Sbjct: 229 DSGSSCD---DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS 285
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG---------------------- 296
T+ ++L +C+ S LL G +H ++ G +V
Sbjct: 286 FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEM 345
Query: 297 ---------TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIF 347
T +I+ Y + G A F + +K+ ++ ++ GF +G G +A+ +F
Sbjct: 346 MMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLF 405
Query: 348 NEMLGKNITPDEGVFTAVLSACSHSGLVDEGK--EIFYKMTRDYNVEPTTTHYSCLVDLL 405
+ML + + + T+ + AC GLV E K E + + + L+D+
Sbjct: 406 TDMLQRGVELTDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMC 462
Query: 406 GRAGKLDEAYATIDN 420
R ++ +A D
Sbjct: 463 TRCERMADAEEMFDQ 477
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 15/243 (6%)
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
V DG L LSA D+++ KAVH ++ + + N++I Y F A
Sbjct: 79 VIDGFFYLLRLSA--QYHDVEVTKAVHASFLKLREEKTR---LGNALISTYLKLGFPREA 133
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSR 270
+F L+ VS+ +LISG+ + + L++F +M G V P+E T +++L AC R
Sbjct: 134 ILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVR 193
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY-----ANCGSFLCAHRAFNEIPDKSLA 325
+S LG +H +VK G+ + V SL+S+Y ++C L + F+EIP + +A
Sbjct: 194 VSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVA 250
Query: 326 SWTVMVTGFGIHGKGREAISIFNEM-LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
SW +V+ GK +A +F EM + D + +LS+C+ S ++ G+E+ +
Sbjct: 251 SWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGR 310
Query: 385 MTR 387
R
Sbjct: 311 AIR 313
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 1 MPQAQLIFDQIV--FKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYP 58
M A+ +FDQ +S S+I GYA G + +R + D +
Sbjct: 468 MADAEEMFDQWPSNLDSSKATTSIIGGYA--RNGLPDKAVSLFHRTLCEQKLFLDEVSLT 525
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+L CG L REMG ++H + G SD+ +GNSLISMY K D A +F+ M
Sbjct: 526 LILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREH 585
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
D+ SWN+++S Y+ +A ++ M + D T+ ++SA
Sbjct: 586 DVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 293/578 (50%), Gaps = 31/578 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M AQ++FD N +N+MI GY+ G ++L+L+ ++S G D + V
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHG---FKALLLFHRLMSSGLGFDEISLSGV 388
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+AC + G++++GL + L DV V N+ I MY K + A VFD+M RD
Sbjct: 389 FRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 448
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SWN +++ + +NG+ + +F M RS + D T ++L AC L G +H
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKL----FEGLAVKDT------------- 223
+V++ +++N V S+IDMY C I A K+ F+ V T
Sbjct: 508 IVKSG--MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQ 565
Query: 224 ---VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSV 280
VSWNS+ISGY + LF +M G PD+ T +VL C+ +++ LG +
Sbjct: 566 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 281 HSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
H+ ++KK + + ++L+ MY+ CG + F + + +W M+ G+ HGKG
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
EAI +F M+ +NI P+ F ++L AC+H GL+D+G E FY M RDY ++P HYS
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSN 745
Query: 401 LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHR-NVKLAEISAQKLFEMDPN 459
+VD+LG++GK+ A I M + ++ +W LL C +HR NV++AE + L +DP
Sbjct: 746 MVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQ 805
Query: 460 KVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQ 519
S Y LSN+YA W P S+ EL +H F GD +H +
Sbjct: 806 DSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPR 865
Query: 520 SDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEK 557
++IY +L + ++K D SS + VE E +++
Sbjct: 866 WEEIYEELGLIYSEMKPF----DDSSFVRGVEVEEEDQ 899
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 207/414 (50%), Gaps = 7/414 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +A F+ + ++ WNSM+ GY S +S+ ++ +M G + D T+ +
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYL---QNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LK C L +G+++HG+VV G ++DV ++L+ MY K + VF +P ++
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW+ +++G V+N A F M++ + ++L +C L +L+LG +H +
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++ + + V + +DMY CD + A+ LF+ + S+N++I+GY + F
Sbjct: 307 ALKSD--FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 364
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ L LF ++ G DE+++ V AC+ + L G ++ +K ++ V + I
Sbjct: 365 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI 424
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY C + A R F+E+ + SW ++ +GKG E + +F ML I PDE
Sbjct: 425 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
F ++L AC+ G + G EI + + ++ S L+D+ + G ++EA
Sbjct: 485 TFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMYSKCGMIEEA 536
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 195/412 (47%), Gaps = 35/412 (8%)
Query: 56 TYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
+ FV K C E+G + H +++ G +V N L+ +Y D +A +VFDKM
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 116 P-------------------------------VRDLTSWNTMMSGYVKNGEAGDAFVVFD 144
P VRD+ SWN+M+SGY++NGE+ + VF
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 145 HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN 204
M R G+ DG T +L C L D LG +HG VVR + ++++DMY
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG--CDTDVVAASALLDMYAK 227
Query: 205 CDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
+ ++F+G+ K++VSW+++I+G + L+ F +M A + SV
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L +C+ +S L LG +H++ +K + + V T+ + MYA C + A F+ + +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
S+ M+TG+ G +A+ +F+ ++ + DE + V AC+ + EG +I Y
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI-YG 406
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
+ ++ + +D+ G+ L EA+ D M+ + + W A+++A
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 286/540 (52%), Gaps = 19/540 (3%)
Query: 4 AQLIFDQIVFKN-SFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKA-DNFTYPFVL 61
A+ +FDQ ++ SFL NSMI+ Y + S LYR++ A DNFT+ +
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLET---RQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
K+C + G+++H + G +D+YV ++ MY KFG MG AR FD+MP R
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SW ++SGY++ GE A +FD M V M+ GD+ +
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSAR--------- 196
Query: 182 VRNSGRLSNNEFVT-NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
R +++ +T +MI YCN I ARKLF+ + ++ VSWN++I GY +
Sbjct: 197 -RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 241 QVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ + LF +M ++ PD+VT++SVL A S AL LG H ++ +K V T++
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ MY+ CG A R F+E+P+K +ASW M+ G+ ++G R A+ +F M+ + PDE
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDE 374
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
AV++AC+H GLV+EG++ F+ M R+ + HY C+VDLLGRAG L EA I
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXX 479
NM +PN + ++ LSAC +++++ AE +K E++P YV L N+YAA+KRW
Sbjct: 434 NMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDD 493
Query: 480 XXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGY 539
S E+N +V +F +GDT+H I+ L DL + + Y
Sbjct: 494 FGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 277/478 (57%), Gaps = 11/478 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M + + +FD K++ W SM+ GY G ++L ++ EM+SFG A+ FT
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVT---GKEHVKALEVFVEMVSFGLDANEFTLSSA 169
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+KAC +L +G HG+V+ G E + ++ ++L +Y + AR VFD+MP D+
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDV 229
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
W ++S + KN +A +F M R GLV DG+T +L+ACG+L LK GK +HG
Sbjct: 230 ICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHG 289
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
++ N + +N V +S++DMY C + AR++F G++ K++VSW++L+ GY + G
Sbjct: 290 KLITNG--IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEH 347
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ +E+F +M D +VL AC+ ++A+ LG +H V++G N V ++L
Sbjct: 348 EKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESAL 403
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I +Y G A R ++++ +++ +W M++ +G+G EA+S FN+M+ K I PD
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F A+L+AC H+G+VDEG+ F M + Y ++P T HYSC++DLLGRAG +EA ++
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 420 NMKLKPNEDVWTALLSACRLHRNV-KLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKR 476
+ + + +W LL C + + ++AE A+++ E++P YV LSN+Y A R
Sbjct: 524 RAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGR 581
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 195/382 (51%), Gaps = 10/382 (2%)
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGD-MGTARLVFDKM 115
Y +L+ C + GI+ H VV GLE+D VGNSL+S+Y K G M R VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
V+D SW +MMSGYV E A VF M GL + T+ + + AC +L +++LG+
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
HG V+ + N F+++++ +Y AR++F+ + D + W +++S + K
Sbjct: 184 CFHGVVITHG--FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 236 CGGAFQVLELFGQMFIG-GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
+ L LF M G G VPD T +VL AC + L G +H L+ G G N
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 295 VGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN 354
V +SL+ MY CGS A + FN + K+ SW+ ++ G+ +G+ +AI IF EM K+
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 355 ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
+ F VL AC+ V GKEI + R S L+DL G++G +D A
Sbjct: 362 LY----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE-SALIDLYGKSGCIDSA 416
Query: 415 YATIDNMKLKPNEDVWTALLSA 436
M ++ N W A+LSA
Sbjct: 417 SRVYSKMSIR-NMITWNAMLSA 437
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 275/527 (52%), Gaps = 9/527 (1%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N + +N MIRG + N +L LYR M G K D FTY FV AC L +G
Sbjct: 95 NHYSFNYMIRGLTNT--WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
VH + GLE DV++ +SLI MY K G +G AR +FD++ RD SWN+M+SGY + G
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 212
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
A DA +F M G D T++++L AC L DL+ G+ + + LS F+
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST--FL 270
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
+ +I MY C + AR++F + KD V+W ++I+ Y + G + + +LF +M G
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
PD T+ +VL AC + AL LG + ++ + N V T L+ MY CG A R
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
F +P K+ A+W M+T + G +EA+ +F+ M ++ P + F VLSAC H+GL
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 375 VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
V +G F++M+ + + P HY+ ++DLL RAG LDEA+ ++ KP+E + A+L
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 435 SACRLHRNVKLAEISAQKLFEMDPNKVSG-YVCLSNIYAAEKRWXXXXXXXXXXXXXXXX 493
AC ++V + E + + L EM K +G YV SN+ A K W
Sbjct: 508 GACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVV 567
Query: 494 XPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKD-LNEQLKKVGY 539
P S+ E+ + +F AG Q + L D L E++K+ Y
Sbjct: 568 KTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 201/386 (52%), Gaps = 22/386 (5%)
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDG--LESDVYVGNSLISMYLKFGDMGTARLVFDK 114
+ F+LK C I V+ L + L V N LI ++ GD + +F
Sbjct: 40 FLFLLKKC---------ISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSV 90
Query: 115 MPVRDLTSWNTMMSGYVKN-GEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKL 173
+ S+N M+ G + A ++ M+ SGL D T + AC L ++ +
Sbjct: 91 TEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV 150
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY 233
G++VH + + L + + +S+I MY C + ARKLF+ + +DTVSWNS+ISGY
Sbjct: 151 GRSVHSSLFKVG--LERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGY 208
Query: 234 EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNT 293
+ G A ++LF +M G PDE T++S+LGACS + L G + + K G++T
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 268
Query: 294 AVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK 353
+G+ LISMY CG A R FN++ K +WT M+T + +GK EA +F EM
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 354 NITPDEGVFTAVLSACSHSGLVDEGKEI---FYKMTRDYNVEPTTTHYSCLVDLLGRAGK 410
++PD G + VLSAC G ++ GK+I +++ +N+ T LVD+ G+ G+
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG----LVDMYGKCGR 384
Query: 411 LDEAYATIDNMKLKPNEDVWTALLSA 436
++EA + M +K NE W A+++A
Sbjct: 385 VEEALRVFEAMPVK-NEATWNAMITA 409
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 182/366 (49%), Gaps = 41/366 (11%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD+I +++ WNSMI GY+ AG + ++ L+R+M G + D T +L A
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYS-EAG--YAKDAMDLFRKMEEEGFEPDERTLVSMLGA 242
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C L G + + + + ++G+ LISMY K GD+ +AR VF++M +D +W
Sbjct: 243 CSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAW 302
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
M++ Y +NG++ +AF +F M ++G+ D T+ +LSACG + L+LGK + +
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
S L +N +V ++DMY C + A ++FE + VK+ +WN++I+ Y G A + L
Sbjct: 363 LS--LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEAL 420
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
LF +M + P ++T I VL AC VH+ LV +G
Sbjct: 421 LLFDRMSVP---PSDITFIGVLSAC-----------VHAGLVHQG--------------- 451
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
C F F +P + +T ++ G EA GK PDE +
Sbjct: 452 --CRYFHEMSSMFGLVP--KIEHYTNIIDLLSRAGMLDEAWEFMERFPGK---PDEIMLA 504
Query: 364 AVLSAC 369
A+L AC
Sbjct: 505 AILGAC 510
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 41/267 (15%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F+Q++ K+ W +MI Y+ + SS + L+ EM G D T VL A
Sbjct: 287 ARRVFNQMIKKDRVAWTAMITVYSQNG---KSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG + E+G ++ L+ ++YV L+ MY K G + A VF+ MPV++ +W
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N M++ Y G A +A ++FD M + T + +LSAC VH +V
Sbjct: 404 NAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC-----------VHAGLVH 449
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
C + +F GL V + ++I + G +
Sbjct: 450 Q-------------------GCRYFHEMSSMF-GL-VPKIEHYTNIIDLLSRAGMLDEAW 488
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSR 270
E F + F G PDE+ + ++LGAC +
Sbjct: 489 E-FMERFPGK--PDEIMLAAILGACHK 512
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 285/537 (53%), Gaps = 7/537 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ IF+++ +++ WN++I Y + S + L++ M G +D
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYV---QDENESEAFDLFKRMNLCGIVSDGACLAST 535
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LKAC + G +VH L V GL+ D++ G+SLI MY K G + AR VF +P +
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
S N +++GY +N +A V+F M G+ T ++ AC L LG HG
Sbjct: 596 VSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV-KDTVSWNSLISGYEKCGGA 239
+ + G S E++ S++ MY N ++ A LF L+ K V W ++SG+ + G
Sbjct: 655 ITKR-GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ L+ + +M G +PD+ T ++VL CS +S+L G ++HS + + ++ +L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 300 ISMYANCGSFLCAHRAFNEIPDKS-LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
I MYA CG + + F+E+ +S + SW ++ G+ +G +A+ IF+ M +I PD
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPD 833
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
E F VL+ACSH+G V +G++IF M Y +E H +C+VDLLGR G L EA I
Sbjct: 834 EITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI 893
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
+ LKP+ +W++LL ACR+H + EISA+KL E++P S YV LSNIYA++ W
Sbjct: 894 EAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWE 953
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK 535
P YS+ ++ + H F AGD SH + I L+DL + +K
Sbjct: 954 KANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 8/436 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+L+F ++ + WN MI G+ + ++ + M K+ T V
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHG---KRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L A G + ++G+ VH + GL S++YVG+SL+SMY K M A VF+ + ++
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
WN M+ GY NGE+ +F M+ SG D T +LLS C DL++G H
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++ +L+ N FV N+++DMY C + AR++FE + +D V+WN++I Y +
Sbjct: 454 IIKK--KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES 511
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ +LF +M + G V D + S L AC+ + L G VH VK G + G+SLI
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 571
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY+ CG A + F+ +P+ S+ S ++ G+ EA+ +F EML + + P E
Sbjct: 572 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEI 630
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMT-RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F ++ AC + G + ++T R ++ E S L + G + EA A
Sbjct: 631 TFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG-MTEACALFS 689
Query: 420 NMKLKPNEDVWTALLS 435
+ + +WT ++S
Sbjct: 690 ELSSPKSIVLWTGMMS 705
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 197/414 (47%), Gaps = 41/414 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +F+ IV N+ W + GY AG +++++ M G + D+ +
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYV-KAG--LPEEAVLVFERMRDEGHRPDHLAFV-- 265
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
++I+ Y++ G + ARL+F +M D+
Sbjct: 266 ---------------------------------TVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WN M+SG+ K G A F +MR+S + +T+ ++LSA G + +L LG VH
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
++ L++N +V +S++ MY C+ + A K+FE L K+ V WN++I GY G +
Sbjct: 353 AIKLG--LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+V+ELF M G D+ T S+L C+ L +GS HS ++KK N VG +L+
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MYA CG+ A + F + D+ +W ++ + EA +F M I D
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
+ L AC+H + +GK++ + ++ ++ S L+D+ + G + +A
Sbjct: 531 CLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 185/423 (43%), Gaps = 42/423 (9%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
K+ WNSM+ Y+ RS V E F K FT+ VL C E G
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK---FTFSIVLSTCARETNVEFG 179
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
++H ++ GLE + Y G +L+ MY K + AR VF+ + + W + SGYVK
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 134 GEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
G +A +VF+ MR G R + F
Sbjct: 240 GLPEEAVLVFERMRDEG-----------------------------------HRPDHLAF 264
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
VT +I+ Y + AR LF ++ D V+WN +ISG+ K G +E F M
Sbjct: 265 VT--VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS 322
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
T+ SVL A ++ L LG VH+ +K G N VG+SL+SMY+ C A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
+ F + +K+ W M+ G+ +G+ + + +F +M D+ FT++LS C+ S
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTAL 433
++ G + F+ + + + LVD+ + G L++A + M + N W +
Sbjct: 443 DLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV-TWNTI 500
Query: 434 LSA 436
+ +
Sbjct: 501 IGS 503
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 41/368 (11%)
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L LR +G VH ++ G++S+ +GN+++ +Y K + A FD + +D+T+WN+M
Sbjct: 74 LALR-IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSM 131
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+S Y G+ G F + + + + T +LS C +++ G+ +H +++
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG- 190
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L N + +++DMY CD IS AR++FE + +TV W L SGY K G + + +F
Sbjct: 191 -LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M G PD + ++V I+ Y
Sbjct: 250 ERMRDEGHRPDHLAFVTV-----------------------------------INTYIRL 274
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
G A F E+ + +W VM++G G G AI F M ++ +VL
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
SA +D G + + + + S LV + + K++ A + ++ K N
Sbjct: 335 SAIGIVANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK-N 392
Query: 427 EDVWTALL 434
+ W A++
Sbjct: 393 DVFWNAMI 400
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 19/282 (6%)
Query: 171 LKLGKAVHGYV----VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
L++GKAVH + + GRL N +++D+Y C +S A K F+ L KD +W
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGN------AIVDLYAKCAQVSYAEKQFDFLE-KDVTAW 128
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
NS++S Y G +VL F +F P++ T VL C+R + + G +H ++K
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
G N+ G +L+ MYA C A R F I D + WT + +G+ G EA+ +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
F M + PD F V++ G + + + +F +M+ P ++ ++ G
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHG 303
Query: 407 RAGKLDEAYATIDNMK---LKPNEDVWTALLSACRLHRNVKL 445
+ G A NM+ +K ++LSA + N+ L
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVT 332
AL +G +VHS + G +G +++ +YA C A + F+ + +K + +W M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 333 GFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVE 392
+ GK + + F + I P++ F+ VLS C+ V+ G++I M + +E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 393 PTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ LVD+ + ++ +A + + + PN WT L S
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFS 234
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 291/534 (54%), Gaps = 14/534 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +F+++ +++ WN+M+ G+ C +G + ++ L+REM D+ T ++++
Sbjct: 106 AAKVFERMPERDATTWNAMLSGF-CQSG--HTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT-- 121
++ +H + + G++ V V N+ IS Y K GD+ +A+LVF+ + D T
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWN+M Y GEA DAF ++ M R D +T + L ++C + L G+ +H +
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+ + G + E + N+ I MY + AR LF+ + + VSW +ISGY + G +
Sbjct: 283 I-HLGTDQDIEAI-NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDE 340
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS----YLVKKGYGMNTAVGT 297
L LF M G PD VT++S++ C + +L G + + Y K+ N +
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD---NVMICN 397
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+LI MY+ CGS A F+ P+K++ +WT M+ G+ ++G EA+ +F++M+ + P
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+ F AVL AC+HSG +++G E F+ M + YN+ P HYSC+VDLLGR GKL+EA
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
I NM KP+ +W ALL+AC++HRNVK+AE +A+ LF ++P + YV ++NIYAA W
Sbjct: 518 IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMW 577
Query: 478 XXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLN 531
P S ++N H F G+ H +++ IY L L+
Sbjct: 578 DGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 216/455 (47%), Gaps = 24/455 (5%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
WN IR + N SL+L+REM G + +NFT+PFV KAC L VH
Sbjct: 20 WNLQIRE---AVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGD 138
++ SDV+VG + + M++K + A VF++MP RD T+WN M+SG+ ++G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 139 AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
AF +F MR + + D T++ L+ + LKL +A+H +R + V N+
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT--VANTW 194
Query: 199 IDMYCNCDFISGARKLFEGLAVKD--TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
I Y C + A+ +FE + D VSWNS+ Y G AF L+ M P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
D T I++ +C L G +HS+ + G + + ISMY+ A F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 317 NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD 376
+ + ++ SWTVM++G+ G EA+++F+ M+ PD +++S C G ++
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 377 EGKEI-----FYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV-- 429
GK I Y RD NV + L+D+ + G + EA DN P + V
Sbjct: 375 TGKWIDARADIYGCKRD-NVMIC----NALIDMYSKCGSIHEARDIFDN---TPEKTVVT 426
Query: 430 WTALLSACRLHRNVKLAEISAQKLFEMD--PNKVS 462
WT +++ L+ A K+ ++D PN ++
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 139/285 (48%), Gaps = 7/285 (2%)
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ +WN + V + ++ ++F M+R G + T + AC L D+ + VH
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+++++ ++ FV + +DM+ C+ + A K+FE + +D +WN+++SG+ + G
Sbjct: 77 HLIKSP--FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ LF +M + PD VTV++++ + S +L L ++H+ ++ G + V +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 300 ISMYANCGSFLCAHRAFNEIP--DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
IS Y CG A F I D+++ SW M + + G+ +A ++ ML + P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIF---YKMTRDYNVEPTTTHYS 399
D F + ++C + + +G+ I + D ++E T S
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
R+L+ + +WN I + L LF +M GG P+ T V AC+R+
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
+ + VH++L+K + + VGT+ + M+ C S A + F +P++ +W M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDE-GVFTAVLSACSHSGLVDEGKEIFYKMTRDYN 390
+GF G +A S+F EM ITPD V T + SA L + E + +
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL--KLLEAMHAVGIRLG 183
Query: 391 VEPTTTHYSCLVDLLGRAGKLDEA 414
V+ T + + G+ G LD A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSA 207
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/616 (29%), Positives = 304/616 (49%), Gaps = 41/616 (6%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRV 76
F W +MI G + ++L ++R+M G + T + AC L + G V
Sbjct: 318 FTWTAMISGLIHNG---MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
H + V G DV VGNSL+ MY K G + AR VFD + +D+ +WN+M++GY + G
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 137 GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTN 196
G A+ +F M+ + L + T ++S GY+
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMIS---------------GYIKNGD---------EG 470
Query: 197 SMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
+D++ R +G ++T +WN +I+GY + G + LELF +M +P
Sbjct: 471 EAMDLF--------QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
+ VT++S+L AC+ + + +H ++++ AV +L YA G + F
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 317 NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD 376
+ K + +W ++ G+ +HG A+++FN+M + ITP+ G ++++ A G VD
Sbjct: 583 LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVD 642
Query: 377 EGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
EGK++FY + DY++ P H S +V L GRA +L+EA I M ++ +W + L+
Sbjct: 643 EGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG 702
Query: 437 CRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPP 496
CR+H ++ +A +A+ LF ++P + +S IYA + P
Sbjct: 703 CRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPL 762
Query: 497 SYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKE 556
S+ E+ ++H F GD S +D +Y L E++ ++ D + +E E +E
Sbjct: 763 GQSWIEVRNLIHTFTTGDQSKLCTDVLYP----LVEKMSRLDNRSDQYNGELWIEEEGRE 818
Query: 557 KMLWDHSERLALAFALINT--GPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDIC 614
+ HSE+ A+AF LI++ TTIRI KNLR+C DCH K VSK +I++ D
Sbjct: 819 ETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTR 878
Query: 615 RFHHFRDGICSCGGYW 630
HHF++G CSC YW
Sbjct: 879 CLHHFKNGDCSCKDYW 894
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 209/441 (47%), Gaps = 41/441 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +FD + +N F W++MI Y+ N L+R M+ G D+F +P +
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRE---NRWREVAKLFRLMMKDGVLPDDFLFPKI 187
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L+ C + E G +H +V+ G+ S + V NS++++Y K G++ A F +M RD+
Sbjct: 188 LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV 247
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WN+++ Y +NG+ +A + M + G+ T L+ +LGK
Sbjct: 248 IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN-----QLGK----- 297
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGA 239
CD + E + D +W ++ISG G
Sbjct: 298 ------------------------CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+Q L++F +MF+ G VP+ VT++S + ACS + + GS VHS VK G+ + VG SL
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ MY+ CG A + F+ + +K + +W M+TG+ G +A +F M N+ P+
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+ ++S +G E ++F +M +D V+ T ++ ++ + GK DEA
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 420 NMKLK---PNEDVWTALLSAC 437
M+ PN +LL AC
Sbjct: 514 KMQFSRFMPNSVTILSLLPAC 534
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 177/385 (45%), Gaps = 42/385 (10%)
Query: 49 GQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGL--ESDVYVGNSLISMYLKFGDMG 106
G K TY +L++C D +G +H GL E DV+V L+SMY K G +
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETKLLSMYAKCGCIA 132
Query: 107 TARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACG 166
AR VFD M R+L +W+ M+ Y + + +F M + G++ D +L C
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 167 DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
+ D++ GK +H V++ +S+ V+NS++ +Y C + A K F + +D ++W
Sbjct: 193 NCGDVEAGKVIHSVVIKLG--MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
NS++ Y + G + +EL +M G P VT ++G +++ + +
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-- 308
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
+ +G+ V T WT M++G +G +A+ +
Sbjct: 309 ETFGITADVFT-----------------------------WTAMISGLIHNGMRYQALDM 339
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
F +M + P+ + +SACS ++++G E+ + ++ S LVD+
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-LVDMYS 398
Query: 407 RAGKLDEAYATIDNMKLKPNEDVWT 431
+ GKL++A D++K N+DV+T
Sbjct: 399 KCGKLEDARKVFDSVK---NKDVYT 420
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 139/309 (44%), Gaps = 7/309 (2%)
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+NG +A D + + G +T L LL +C D + LG+ +H R +
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
FV ++ MY C I+ ARK+F+ + ++ +W+++I Y + +V +LF M
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
G +PD+ +L C+ + G +HS ++K G V S++++YA CG
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
A + F + ++ + +W ++ + +GK EA+ + EM + I+P + ++ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNED 428
G D ++ KM + + ++ ++ L G +A M L PN
Sbjct: 295 LGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 429 VWTALLSAC 437
+ +SAC
Sbjct: 354 TIMSAVSAC 362
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 285/545 (52%), Gaps = 3/545 (0%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F + +N++ W++M+ GYA + + L+ G +D + + VL +
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAA 233
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ +G ++H + + +GL V + N+L++MY K + A +FD R+ +W+ M
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
++GY +NGE+ +A +F M +G+ T++ +L+AC D+ L+ GK +H ++++
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG- 352
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
+ F T +++DMY ++ ARK F+ L +D W SLISGY + + L L+
Sbjct: 353 -FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M G +P++ T+ SVL ACS ++ L LG VH + +K G+G+ +G++L +MY+ C
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
GS + F P+K + SW M++G +G+G EA+ +F EML + + PD+ F ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
SACSH G V+ G F M+ ++P HY+C+VDLL RAG+L EA I++ +
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 427 EDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXX 486
+W LLSAC+ H +L + +KL + + S YV LS IY A R
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 487 XXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSV 546
S+ EL H F GDT H ++ + ++ Q+ + G++ S
Sbjct: 652 MRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSS 711
Query: 547 LYDVE 551
+ E
Sbjct: 712 FVEEE 716
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 247/473 (52%), Gaps = 22/473 (4%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A IF+ I+ K+ WNS+I GY+ + G +SS + L+REM + + +T +
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
KA L +G + H LVV D+YV SL+ MY K G + VF MP R+
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGT--TMLALLSACGDLMDLKLGKAVH 178
+W+TM+SGY G +A VF+ R G + A+LS+ + + LG+ +H
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
++N L ++N+++ MY C+ ++ A K+F+ +++++W+++++GY + G
Sbjct: 245 CITIKNG--LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ + ++LF +MF G P E T++ VL ACS I L G +HS+L+K G+ + T+
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ MYA G A + F+ + ++ +A WT +++G+ + EA+ ++ M I P+
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 359 EGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
+ +VL ACS ++ GK++ + + + +E S L + + G L++
Sbjct: 423 DPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLV 480
Query: 418 IDNMKLKPNEDV--WTALLSACRLHRNVKLAEISAQKLFE------MDPNKVS 462
+ PN+DV W A++S L N + E A +LFE M+P+ V+
Sbjct: 481 F---RRTPNKDVVSWNAMISG--LSHNGQGDE--ALELFEEMLAEGMEPDDVT 526
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 27/395 (6%)
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
G VHG ++ G + + N L++ Y K G + A +F+ + +D+ SWN++++GY +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 133 NGEAGDAFVV---FDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
NG ++ V F MR ++ + T+ + A L +G+ H VV+ S
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS--F 150
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG---GAFQVLELF 246
+ +V S++ MYC + K+F + ++T +W++++SGY G A +V LF
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+ G+ D V +VL + + + LG +H +K G A+ +L++MY+ C
Sbjct: 211 LREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
S A + F+ D++ +W+ MVTG+ +G+ EA+ +F+ M I P E VL
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 367 SACSHSGLVDEGKEI---FYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
+ACS ++EGK++ K+ + ++ TT LVD+ +AG L +A D ++
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATTA----LVDMYAKAGCLADARKGFDCLQ- 384
Query: 424 KPNEDVWTALLS----------ACRLHRNVKLAEI 448
+ + +WT+L+S A L+R +K A I
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 15/288 (5%)
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
+T+L L+ +L G+AVHG ++R N +++ Y C ++ A +F
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQH--ANVLVNFYAKCGKLAKAHSIF 72
Query: 216 EGLAVKDTVSWNSLISGYEKCGG---AFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
+ KD VSWNSLI+GY + GG ++ V++LF +M +P+ T+ + A S +
Sbjct: 73 NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQ 132
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVT 332
+ +G H+ +VK + V TSL+ MY G + F +P+++ +W+ MV+
Sbjct: 133 SSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 333 GFGIHGKGREAISIFNEMLGKNITPDEG-----VFTAVLSACSHSGLVDEGKEIFYKMTR 387
G+ G+ EAI +FN L + +EG VFTAVLS+ + + V G++I + +T
Sbjct: 193 GYATRGRVEEAIKVFNLFLREK---EEGSDSDYVFTAVLSSLAATIYVGLGRQI-HCITI 248
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ + LV + + L+EA D+ + N W+A+++
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVT 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
P T++ L S+ L+ G +VH +++ G L++ YA CG AH
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 316 FNEIPDKSLASWTVMVTGFGIHG---KGREAISIFNEMLGKNITPD----EGVFTAVLSA 368
FN I K + SW ++TG+ +G + +F EM ++I P+ G+F A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 369 CS-------------------------------HSGLVDEGKEIFYKMTRDYNVEPTTTH 397
S +GLV++G ++F Y E T
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF-----AYMPERNTYT 186
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNED------VWTALLSA 436
+S +V G+++EA N+ L+ E+ V+TA+LS+
Sbjct: 187 WSTMVSGYATRGRVEEAIKVF-NLFLREKEEGSDSDYVFTAVLSS 230
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/584 (31%), Positives = 295/584 (50%), Gaps = 56/584 (9%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVL--YREMLSF---------GQK 51
QA +FD+I +N+F +N+++ Y +SR + + LS+ +
Sbjct: 75 QALHVFDEITVRNAFSYNALLIAY--------TSREMYFDAFSLFLSWIGSSCYSSDAAR 126
Query: 52 ADNFTYPFVLKA---CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA 108
D+ + VLKA C D L + +VHG V+ G +SDV+VGN +I+ Y K ++ +A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 109 RLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGD 167
R VFD+M RD+ SWN+M+SGY ++G D ++ M S +G T++++ ACG
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 168 LMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWN 227
DL G VH ++ N ++ + + N++I Y C + AR LF+ ++ KD+V++
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLS--LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 228 SLISGYEKCGGAFQVLELFGQM-FIG------------------------------GAVP 256
++ISGY G + + LF +M IG G+ P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
+ VT+ S+L + + S L G +H++ ++ G N V TS+I YA G L A R F
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 317 NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD 376
+ D+SL +WT ++T + +HG A S+F++M PD+ TAVLSA +HSG D
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 377 EGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
+ IF M Y++EP HY+C+V +L RAGKL +A I M + P VW ALL+
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Query: 437 CRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPP 496
+ ++++A + +LFEM+P Y ++N+Y RW P
Sbjct: 545 ASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIP 604
Query: 497 SYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYM 540
S+ E K + F A D+S ++S ++Y ++ L E + Y+
Sbjct: 605 GTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 198/413 (47%), Gaps = 55/413 (13%)
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
+++H +VV ++ D ++ + LIS Y + A VFD++ VR+ S+N ++ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 134 GEAGDAFVVF-----------DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
DAF +F D R + + +L LS C D L + VHG+V+
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSI--SISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
R G ++ FV N MI Y CD I ARK+F+ ++ +D VSWNS+ISGY + G
Sbjct: 160 R--GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 243 LELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+++ M P+ VTVISV AC + S L+ G VH +++ M+ ++ ++I
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT----- 356
YA CGS A F+E+ +K ++ +++G+ HG +EA+++F+EM ++
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 357 --------------------------PDEGVFTAVLSACSHSGLVDEGKEIFYKMTR--- 387
P+ +++L + ++S + GKEI R
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
D N+ TT+ ++D + G L A DN K + + WTA+++A +H
Sbjct: 398 DNNIYVTTS----IIDNYAKLGFLLGAQRVFDNCKDR-SLIAWTAIITAYAVH 445
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 266/522 (50%), Gaps = 5/522 (0%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F ++ F+N+ W ++I G L + EM + +D +T+ LKAC
Sbjct: 165 VFSEMPFRNAVTWTAIITGLV---HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
L + G +H V+V G + + V NSL +MY + G+M +F+ M RD+ SW ++
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ Y + G+ A F MR S + + T ++ SAC L L G+ +H V+ S
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL--SL 339
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
L+++ V+NSM+ MY C + A LF+G+ +D +SW+++I GY + G + + F
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
M G P + + S+L ++ + G VH+ + G N+ V +SLI+MY+ C
Sbjct: 400 SWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKC 459
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
GS A F E + S T M+ G+ HGK +EAI +F + L PD F +VL
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
+AC+HSG +D G F M YN+ P HY C+VDLL RAG+L +A I+ M K +
Sbjct: 520 TACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKD 579
Query: 427 EDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXX 486
+ VWT LL AC+ +++ +A+++ E+DP + V L+NIY++
Sbjct: 580 DVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKN 639
Query: 487 XXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLK 528
P +S ++ V F +GD H QS+DIY L+
Sbjct: 640 MKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 201/413 (48%), Gaps = 8/413 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM--LSFGQKADNFTYPFVL 61
A+ +FD++ + W S+I+ Y + N+S +L+L+ M + D VL
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTA---NNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
KACG G +H V L S VYVG+SL+ MY + G + + VF +MP R+
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+W +++G V G + F M RS + D T L AC L +K GKA+H +V
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+ V NS+ MY C + LFE ++ +D VSW SLI Y++ G +
Sbjct: 236 IVRG--FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+E F +M P+E T S+ AC+ +S L+ G +H ++ G + +V S++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY+ CG+ + A F + + + SW+ ++ G+ G G E F+ M P +
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
++LS + +++ G+++ + + + +E +T S L+++ + G + EA
Sbjct: 414 LASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 144/280 (51%), Gaps = 4/280 (1%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR--RSG 150
NS + + G++ AR VFDKMP D+ SW +++ YV + +A ++F MR
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
+ D + + +L ACG ++ G+++H Y V+ S L ++ +V +S++DMY I
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTS--LLSSVYVGSSLLDMYKRVGKIDK 161
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
+ ++F + ++ V+W ++I+G G + L F +M + D T L AC+
Sbjct: 162 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
+ + G ++H++++ +G+ V SL +MY CG F + ++ + SWT +
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 331 VTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
+ + G+ +A+ F +M + P+E F ++ SAC+
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 305 NCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM--LGKNITPDEGVF 362
N G+ A + F+++P + SWT ++ + EA+ +F+ M + ++PD V
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
+ VL AC S + G E + ++ + S L+D+ R GK+D++ M
Sbjct: 112 SVVLKACGQSSNIAYG-ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 423 LKPNEDVWTALLS 435
+ N WTA+++
Sbjct: 171 FR-NAVTWTAIIT 182
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 290/557 (52%), Gaps = 44/557 (7%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N F++N+MI SA +S + LY M+ D T+ +++KA L E+
Sbjct: 99 NVFVYNTMI-----SAVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS--FLSEVK- 150
Query: 75 RVHGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
++H ++V G L Y+ NSL+ Y++ G+ G A VF +MP D++S+N M+ GY K
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 134 GEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
G + +A ++ M G+ D T+L+LL CG L D++LGK VHG++ R S+N
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 194 VTNSMIDMYCNCD--------------------------FI-----SGARKLFEGLAVKD 222
++N+++DMY C F+ A+ +F+ + +D
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 223 TVSWNSLISGYEKCG-GAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSV 280
VSWNSL+ GY K G V ELF +M I V PD VT++S++ + L G V
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 281 HSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
H +++ + + ++LI MY CG A F +K +A WT M+TG HG G
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
++A+ +F M + +TP+ AVL+ACSHSGLV+EG +F M + +P T HY
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510
Query: 401 LVDLLGRAGKLDEAYATID-NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPN 459
LVDLL RAG+++EA + M ++P++ +W ++LSACR +++ AE++ +L +++P
Sbjct: 511 LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPE 570
Query: 460 KVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGD-TSHQ 518
K GYV LSNIYA RW YS + +H+F A + +H
Sbjct: 571 KEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHP 630
Query: 519 QSDDIYAKLKDLNEQLK 535
+ +I L+ L ++K
Sbjct: 631 RWTEIKRILQHLYNEMK 647
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 17/338 (5%)
Query: 104 DMGTARLVF-DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL 162
++ A+L+F + P ++ +NTM+S + + F ++ M R + D T L L+
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 163 SACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD 222
A L ++K +H +++ SG LS ++ NS++ Y A K+F + D
Sbjct: 141 KASSFLSEVK---QIHCHIIV-SGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
S+N +I GY K G + + L+L+ +M G PDE TV+S+L C +S + LG VH
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 283 YLVKKG--YGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
++ ++G Y N + +L+ MY C A RAF+ + K + SW MV GF G
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG-KEIFYKMTRDYNVEPTTTHYS 399
A ++F++M +++ + ++L S G +E+FY+MT V+P
Sbjct: 317 EAAQAVFDQMPKRDLVS----WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 400 CLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALL 434
L+ G+L + + ++LK + + +AL+
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALI 410
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 4/234 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M AQ +FDQ+ ++ WNS++ GY+ + R L Y + K D T +
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL-FYEMTIVEKVKPDRVTMVSL 374
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ + G VHGLV+ L+ D ++ ++LI MY K G + A +VF +D+
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
W +M++G +G A +F M+ G+ + T+LA+L+AC ++ G V +
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE-GLAVKDTVS-WNSLISG 232
+ G E S++D+ C + A+ + + + ++ + S W S++S
Sbjct: 495 MKDKFGFDPETEHY-GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 259/466 (55%), Gaps = 11/466 (2%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
+SF +N+++ YA + ++ Y+ +S G D FT+P V KACG G
Sbjct: 70 SSFSYNTLLSSYAVC---DKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++HG+V G D+YV NSL+ Y G+ A VF +MPVRD+ SW +++G+ + G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+A F M + + T + +L + G + L LGK +HG +++ + +S
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE--T 241
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
N++IDMY C+ +S A ++F L KD VSWNS+ISG C + + ++LF M
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 255 V-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
+ PD + SVL AC+ + A+ G VH Y++ G +T +GT+++ MYA CG A
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
FN I K++ +W ++ G IHG G E++ F EM+ P+ F A L+AC H+G
Sbjct: 362 EIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTG 421
Query: 374 LVDEGKEIFYKM-TRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
LVDEG+ F+KM +R+YN+ P HY C++DLL RAG LDEA + M +KP+ + A
Sbjct: 422 LVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGA 481
Query: 433 LLSACRLHRNV-KLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+LSAC+ + +L + +++ YV LSNI+AA +RW
Sbjct: 482 ILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRW 527
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 131/284 (46%), Gaps = 12/284 (4%)
Query: 154 DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYC-NCDFISGAR 212
+ + +L L+S C L ++ K + ++ L ++ + N ++ + DF S +
Sbjct: 5 EKSVLLELISRCSSL---RVFKQIQTQLITRD--LLRDDLIINKVVTFLGKSADFASYSS 59
Query: 213 KLFEGL-AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
+ + +V + S+N+L+S Y C + + G PD T V AC +
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMV 331
S + G +H + K G+ + V SL+ Y CG A + F E+P + + SWT ++
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
TGF G +EA+ F++M ++ P+ + VL + G + GK I + + ++
Sbjct: 180 TGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
T + L+D+ + +L +A ++ K ++ W +++S
Sbjct: 237 ISLETG-NALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMIS 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 8/227 (3%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYA-CSAGGNSSSRSLVLYREM-LSFGQKADNFTYP 58
+ A +F ++ K+ WNSMI G C S ++ L+ M S G K D
Sbjct: 255 LSDAMRVFGELEKKDKVSWNSMISGLVHC----ERSKEAIDLFSLMQTSSGIKPDGHILT 310
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
VL AC L + G VH ++ G++ D ++G +++ MY K G + TA +F+ + +
Sbjct: 311 SVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK 370
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA-V 177
++ +WN ++ G +G ++ F+ M + G + T LA L+AC + G+
Sbjct: 371 NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTV 224
H R E MID+ C + A +L + + VK V
Sbjct: 431 HKMKSREYNLFPKLEHY-GCMIDLLCRAGLLDEALELVKAMPVKPDV 476
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/618 (28%), Positives = 304/618 (49%), Gaps = 25/618 (4%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
++ FLW S++ G+ + + ++ + EM S G + +NFTY +L C + + G
Sbjct: 288 QDVFLWTSVVSGFVRNL---RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLK-FGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
++H + G E VGN+L+ MY+K A VF M ++ SW T++ G V
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
+G D F + M + + + T+ +L AC L ++ +H Y++R R + E
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR---RHVDGE 461
Query: 193 FVT-NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
V NS++D Y + + A + + +D +++ SL++ + + G L + M+
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
G D++++ + A + + AL G +H Y VK G+ +V SL+ MY+ CGS
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
A + F EI + SW +V+G +G A+S F EM K PD F +LSACS+
Sbjct: 582 AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWT 431
L D G E F M + YN+EP HY LV +LGRAG+L+EA ++ M LKPN ++
Sbjct: 642 GRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFK 701
Query: 432 ALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXX 491
LL ACR N+ L E A K + P+ + Y+ L+++Y +
Sbjct: 702 TLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKR 761
Query: 492 XXXPPSYSFFELNKMVHQFFAGDTSH-QQSDDIYAKLKDLNEQLKKVG--YMPDTSSVLY 548
S E+ VH F + D + +++ IYA+++ + E++K+ G Y + ++
Sbjct: 762 LSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENASF- 820
Query: 549 DVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREI 608
HS + A+ + I P + + KN +C DCH + ++++L+ ++I
Sbjct: 821 -------------HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKI 867
Query: 609 IMRDICRFHHFRDGICSC 626
+RD + H F++G CSC
Sbjct: 868 TVRDGNQVHIFKNGECSC 885
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 202/425 (47%), Gaps = 8/425 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
A+ +FD++ + F W MI + S + +L L+ EM++ G + FT+ V++
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKS---QEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
+C L G RVHG V+ G E + VG+SL +Y K G A +F + D S
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W M+S V + +A + M ++G+ + T + LL A + L+ GK +H ++
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNII 251
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
L N + S++D Y + A ++ +D W S++SG+ + A +
Sbjct: 252 VRGIPL--NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ F +M G P+ T ++L CS + +L G +HS +K G+ +T VG +L+ M
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Query: 303 YANC-GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
Y C S + A R F + ++ SWT ++ G HG ++ + EM+ + + P+
Sbjct: 370 YMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ VL ACS V EI + R + V+ + LVD + K+D A+ I +M
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 422 KLKPN 426
K + N
Sbjct: 489 KRRDN 493
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 197/396 (49%), Gaps = 12/396 (3%)
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
+G+ +H V+ GL ++ + N+L+S+YLK + AR +FD+M R + +W M+S +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
K+ E A +F+ M SG + T +++ +C L D+ G VHG V++ N
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG--FEGN 158
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
V +S+ D+Y C A +LF L DT+SW +IS + L+ + +M
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
G P+E T + +LGA S + L G ++HS ++ +G +N + TSL+ Y+
Sbjct: 219 AGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
A R N ++ + WT +V+GF + + +EA+ F EM + P+ ++A+LS CS
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWT 431
+D GK+I + T E +T + LVD+ + + + + + PN WT
Sbjct: 338 VRSLDFGKQI-HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 432 ALLSACRLHRNVK-----LAEISAQKLFEMDPNKVS 462
L+ H V+ L E+ + E++PN V+
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKR---EVEPNVVT 429
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 11/278 (3%)
Query: 172 KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLIS 231
++G +H V++ G L N + + N+++ +Y D I ARKLF+ ++ + +W +IS
Sbjct: 40 RIGLHIHCPVIK-FGLLENLD-LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
+ K L LF +M G P+E T SV+ +C+ + + G VH ++K G+
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
N+ VG+SL +Y+ CG F A F+ + + SWT+M++ K REA+ ++EM+
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL 411
+ P+E F +L A S GL + GK I + + + LVD + K+
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKM 275
Query: 412 DEAYATIDNMKLKPNEDV--WTALLSACRLHRNVKLAE 447
++A +++ +DV WT+++S RN++ E
Sbjct: 276 EDAVRVLNS---SGEQDVFLWTSVVSG--FVRNLRAKE 308
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 277/599 (46%), Gaps = 79/599 (13%)
Query: 18 LWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVH 77
LWNS+++ + +L LYR M G D + P +L+AC L + H
Sbjct: 125 LWNSILKA---NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 78 GLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAG 137
V+ GL+ +++V N L+++Y K G MG A +F +MPVR+ SWN M+ G+ + +
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 138 DAFVVFDHMRR-----------------------------------SGLVGDGTTMLALL 162
A +F+ M+R SG G +
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 163 SACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD 222
S C +L L + + VHGYV++ G N++I +Y + A LF + K
Sbjct: 302 SVCAELEALSIAEKVHGYVIK--GGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 223 TVSWNSLISGYEKCGGAFQVLELFG----------------------------------- 247
SWNSLI+ + G + L LF
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 248 ----QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
QM + + VT+ +L C+ + AL LG +H ++++ N V +L++MY
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMY 479
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CG F I DK L SW ++ G+G+HG +A+S+F+ M+ PD
Sbjct: 480 AKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALV 539
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
AVLSACSH+GLV++G+EIFY M++ + +EP HY+C+VDLLGR G L EA + NM +
Sbjct: 540 AVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPM 599
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXX 483
+P V ALL++CR+H+NV +AE A +L ++P + Y+ LSNIY+A RW
Sbjct: 600 EPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANV 659
Query: 484 XXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
S+ E+ K ++F +G + + IY L+DL + K G D
Sbjct: 660 RALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 44/334 (13%)
Query: 94 SLISMYLKFGDMGTARLVFDKMPV---RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
+LIS+Y + G + AR VF+ + + DL WN+++ V +G +A ++ MR+ G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
L GDG + +L AC L L +A H V++ L N V N ++ +Y +
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG--LKENLHVVNELLTLYPKAGRMGD 211
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL----- 265
A LF + V++ +SWN +I G+ + +++F M PDEVT SVL
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 266 ------------------------------GACSRISALLLGSSVHSYLVKKGYGMNTAV 295
C+ + AL + VH Y++K G+
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPS 331
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-- 353
+LI +Y G A F +I +K + SW ++T F GK EA+S+F+E+
Sbjct: 332 RNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNH 391
Query: 354 --NITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
N+ + +T+V+ C+ G D+ E F +M
Sbjct: 392 VCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Query: 12 VFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLRE 71
V N W S+I+G C+ G SL +R+M A++ T +L C +L
Sbjct: 395 VKANVVTWTSVIKG--CNVQGRGDD-SLEYFRQMQFSKVLANSVTICCILSICAELPALN 451
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
+G +HG V+ + ++ V N+L++MY K G + LVF+ + +DL SWN+++ GY
Sbjct: 452 LGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYG 511
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+G A A +FD M SG DG ++A+LSAC ++ G+ + + + G
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTV 224
E ++D+ F+ A ++ + + ++ V
Sbjct: 572 EHYA-CIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV---KDTVSWNSLIS 231
+ VH V+ + + N +I +Y + AR +FE +++ D WNS++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
G LEL+ M G D + +L AC + L + H+ +++ G
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
N V L+++Y G A+ F E+P ++ SW VM+ GF A+ IF M
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
+ PDE +T+VLS S G ++ + F+ M
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 255/479 (53%), Gaps = 27/479 (5%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSL------VLYREMLSFGQKADNFTYPFV 60
+F+++ ++LWN +I+GY S++ L +L R M + + D +T+P V
Sbjct: 65 VFERVPSPGTYLWNHLIKGY--------SNKFLFFETVSILMRMMRTGLARPDEYTFPLV 116
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+K C + +G VHGLV+ G + DV VG S + Y K D+ +AR VF +MP R+
Sbjct: 117 MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNA 176
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW ++ YVK+GE +A +FD M L G ++ L GDL++ K
Sbjct: 177 VSWTALVVAYVKSGELEEAKSMFDLMPERNL-GSWNALVDGLVKSGDLVNAK-------- 227
Query: 181 VVRNSGRLSNNEFVT-NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+ + + ++ SMID Y + AR LFE D +W++LI GY + G
Sbjct: 228 --KLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQP 285
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA-VGTS 298
+ ++F +M PDE ++ ++ ACS++ L V SYL ++ ++ V +
Sbjct: 286 NEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPA 345
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
LI M A CG A + F E+P + L S+ M+ G IHG G EAI +F +M+ + I PD
Sbjct: 346 LIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPD 405
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
E FT +L C S LV+EG F M + Y++ + HYSC+V+LL R GKL EAY I
Sbjct: 406 EVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELI 465
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+M + + W +LL C LH N ++AE+ A+ LFE++P YV LSNIYAA RW
Sbjct: 466 KSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRW 524
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 268/476 (56%), Gaps = 8/476 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD ++ FLWNS+IR YA + + L L+ ++L + DNFTY + +
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYA---KAHQFTTVLSLFSQILRSDTRPDNFTYACLARG 115
Query: 64 CGDLLLREMGIR-VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
+ G+R +HG+ +V GL D G++++ Y K G + A +F +P DL
Sbjct: 116 FSESF-DTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN M+ GY G +F+ M+ G + TM+AL S D L + +VH + +
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ + L ++ +V ++++MY C I+ A +F ++ D V+ +SLI+GY +CG +
Sbjct: 235 KIN--LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEA 292
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
L LF ++ + G PD V V VLG+C+ +S + G VHSY+++ G ++ V ++LI M
Sbjct: 293 LHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDM 352
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y+ CG CA F IP+K++ S+ ++ G G+HG A F E+L + PDE F
Sbjct: 353 YSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITF 412
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
+A+L C HSGL+++G+EIF +M ++ +EP T HY +V L+G AGKL+EA+ + +++
Sbjct: 413 SALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQ 472
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGY-VCLSNIYAAEKRW 477
+ + ALLS C +H N LAE+ A+ + + + S Y V LSN+YA RW
Sbjct: 473 KPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRW 528
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 164/397 (41%), Gaps = 37/397 (9%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++H V L D Y L Y D+ +AR +FD P R + WN+++ Y K
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
+ +F + RS D T L + D K + +HG + + L ++
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG--LGFDQIC 143
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
++++ Y I A KLF + D WN +I GY CG + + LF M G
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
P+ T++++ S LL+ SVH++ +K ++ VG +L++MY+ C A
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
FN I + L + + ++TG+ G +EA+ +F E+ PD + VL +C+
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 375 VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD---------------------- 412
GKE+ + R +E S L+D+ + G L
Sbjct: 324 SVSGKEVHSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 413 ------------EAYATIDNMKLKPNEDVWTALLSAC 437
E + I M L P+E ++ALL C
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 180/414 (43%), Gaps = 45/414 (10%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A +F I + LWN MI GY C + + + L+ M G + + +T +
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWD---KGINLFNLMQHRGHQPNCYTMVALTS 215
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
D L + VH + L+S YVG +L++MY + + +A VF+ + DL +
Sbjct: 216 GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVA 275
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
+++++GY + G +A +F +R SG D + +L +C +L D GK VH YV+
Sbjct: 276 CSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI 335
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
R L V +++IDMY C + A LF G+ K+ VS+NSLI G G A
Sbjct: 336 RLGLELDIK--VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
E F ++ G +PDE+T ++L C HS L+ KG + + +
Sbjct: 394 FEKFTEILEMGLIPDEITFSALLCTC-----------CHSGLLNKGQEIFERMKSE---- 438
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
F P + MV G+ GK EA F L K I D G+
Sbjct: 439 -------------FGIEPQTE--HYVYMVKLMGMAGKLEEAFE-FVMSLQKPI--DSGIL 480
Query: 363 TAVLSACSHSGLVDEGK---EIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDE 413
A+LS C V E E+ + E + + L ++ R G+ DE
Sbjct: 481 GALLSCCE----VHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDE 530
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 277/529 (52%), Gaps = 9/529 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
++ IF++I KN+ W +MI Y G S ++L + EM+ G + + T VL +
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSYN---RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVY-VGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
CG + L G VHG V L+ + + +L+ +Y + G + V + R++ +
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN+++S Y G A +F M + D T+ + +SAC + + LGK +HG+V+
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
R ++EFV NS+IDMY + A +F + + V+WNS++ G+ + G + +
Sbjct: 433 RTD---VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEA 489
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ LF M+ +EVT ++V+ ACS I +L G VH L+ G + T+LI M
Sbjct: 490 ISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDM 548
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG A F + +S+ SW+ M+ +G+HG+ AIS FN+M+ P+E VF
Sbjct: 549 YAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVF 608
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
VLSAC HSG V+EGK ++ + + + V P + H++C +DLL R+G L EAY TI M
Sbjct: 609 MNVLSACGHSGSVEEGK-YYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMP 667
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXX 482
+ VW +L++ CR+H+ + + + L ++ + Y LSNIYA E W
Sbjct: 668 FLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRR 727
Query: 483 XXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLN 531
P YS E+++ V +F AG+ + Q+D+IY L +L
Sbjct: 728 LRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQ 776
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 235/433 (54%), Gaps = 10/433 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
++L+F+ + +SF++ +I+ C+ + ++ LY ++S + F +P VL+A
Sbjct: 53 SRLVFEAFPYPDSFMYGVLIK---CNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRA 109
Query: 64 C-GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C G +G +VHG ++ G++ D + SL+ MY + G++ A VFD MPVRDL +
Sbjct: 110 CAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVA 169
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W+T++S ++NGE A +F M G+ D TM++++ C +L L++ ++VHG +
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
R L +E + NS++ MY C + + ++FE +A K+ VSW ++IS Y + + +
Sbjct: 230 RKMFDL--DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKA 287
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN-TAVGTSLIS 301
L F +M G P+ VT+ SVL +C I + G SVH + V++ N ++ +L+
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVE 347
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
+YA CG + D+++ +W +++ + G +A+ +F +M+ + I PD
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ +SAC ++GLV GK+I + R +V S L+D+ ++G +D A + +
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQNS-LIDMYSKSGSVDSASTVFNQI 465
Query: 422 KLKPNEDVWTALL 434
K + + W ++L
Sbjct: 466 KHR-SVVTWNSML 477
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 243/493 (49%), Gaps = 39/493 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +FD + ++ W++++ +C G ++L +++ M+ G + D T V
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVS--SCLENGEVV-KALRMFKCMVDDGVEPDAVTMISV 208
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
++ C +L + VHG + + D + NSL++MY K GD+ ++ +F+K+ ++
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA 268
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW M+S Y + + A F M +SG+ + T+ ++LS+CG + ++ GK+VHG+
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
VR N E ++ +++++Y C +S + ++ ++ V+WNSLIS Y G
Sbjct: 329 AVRRELD-PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
Q L LF QM PD T+ S + AC + LG +H ++++ + V SLI
Sbjct: 388 QALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLI 446
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY+ GS A FN+I +S+ +W M+ GF +G EAIS+F+ M + +E
Sbjct: 447 DMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEV 506
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMT--------------------RDYNVEPTT----- 395
F AV+ ACS G +++GK + +K+ D N T
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMS 566
Query: 396 ----THYSCLVDLLGRAGKLDEAYATIDNM---KLKPNEDVWTALLSACRLHRNVKLAE- 447
+S +++ G G++ A +T + M KPNE V+ +LSAC +V+ +
Sbjct: 567 SRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKY 626
Query: 448 -ISAQKLFEMDPN 459
+ K F + PN
Sbjct: 627 YFNLMKSFGVSPN 639
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 200/422 (47%), Gaps = 13/422 (3%)
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
Y + ++C L L ++H ++V G L D LI Y G ++RLVF+
Sbjct: 4 YMPLFRSCSSLRLVS---QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC-GDLMDLKLG 174
P D + ++ V A ++ + ++L AC G L +G
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYE 234
VHG +++ G + ++ + S++ MY +S A K+F+G+ V+D V+W++L+S
Sbjct: 121 GKVHGRIIK--GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
+ G + L +F M G PD VT+ISV+ C+ + L + SVH + +K + ++
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 295 VGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN 354
+ SL++MY+ CG L + R F +I K+ SWT M++ + +A+ F+EM+
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 355 ITPDEGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYS-CLVDLLGRAGKLD 412
I P+ +VLS+C GL+ EGK + + + R+ ++P S LV+L GKL
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE--LDPNYESLSLALVELYAECGKLS 356
Query: 413 EAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYA 472
+ T+ + N W +L+S HR + + + + K + S+I A
Sbjct: 357 DC-ETVLRVVSDRNIVAWNSLIS-LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 473 AE 474
E
Sbjct: 415 CE 416
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 286/531 (53%), Gaps = 23/531 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ FK+ WNS++ G S G ++V++R+M+ G + D+ ++ V+
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGL--SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C ++ ++HGL + G ES + VGN L+S Y K G + + VF +M R++ SW
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
TM+S DA +F +MR G+ + T + L++A +K G +HG ++
Sbjct: 346 TTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+G +S V NS I +Y + + A+K FE + ++ +SWN++ISG+ + G + + L
Sbjct: 401 -TGFVSEPS-VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL 458
Query: 244 ELFGQMFIGGA---VPDEVTVISVLGACSRISALLL--GSSVHSYLVKKGYGMNTAVGTS 298
+MF+ A +P+E T SVL A + + + G H++L+K G V ++
Sbjct: 459 ----KMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSA 514
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L+ MYA G+ + + FNE+ K+ WT +++ + HG +++F++M+ +N+ PD
Sbjct: 515 LLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPD 574
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
F +VL+AC+ G+VD+G EIF M YN+EP+ HYSC+VD+LGRAG+L EA +
Sbjct: 575 LVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELM 634
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
+ P E + ++L +CRLH NVK+ A+ EM P YV + NIYA ++ W
Sbjct: 635 SEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWD 694
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNK-----MVHQFFAGDTSHQQSDDIY 524
+S+ ++ + F +GD SH +SD+IY
Sbjct: 695 KAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIY 745
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 223/441 (50%), Gaps = 21/441 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A IF+ +V + WN+++ G+ + + +L M S G D FTY L
Sbjct: 130 ALCIFENLVDPDVVSWNTILSGF------DDNQIALNFVVRMKSAGVVFDAFTYSTALSF 183
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C +G+++ VV GLESD+ VGNS I+MY + G AR VFD+M +D+ SW
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 124 NTMMSGYVKNGEAG-DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
N+++SG + G G +A V+F M R G+ D + ++++ C DLKL + +HG +
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ G S E V N ++ Y C + + +F ++ ++ VSW ++IS +
Sbjct: 304 KR-GYESLLE-VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DA 356
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ +F M G P+EVT + ++ A + G +H +K G+ +VG S I++
Sbjct: 357 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA + A +AF +I + + SW M++GF +G EA+ +F + + P+E F
Sbjct: 417 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 475
Query: 363 TAVLSACSHSG--LVDEGKEIFYKMTR-DYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+VL+A + + V +G+ + + N P + S L+D+ + G +DE+ +
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFN 533
Query: 420 NMKLKPNEDVWTALLSACRLH 440
M K N+ VWT+++SA H
Sbjct: 534 EMSQK-NQFVWTSIISAYSSH 553
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 202/409 (49%), Gaps = 22/409 (5%)
Query: 33 NSSSRSLVLYREMLS---FGQKADNFTYPFVLKAC-GDLLLREMGIRVHGLVVVDGLESD 88
NS +R+L +++E L FG+ D T LKAC GDL + G ++HG G S
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDL---KRGCQIHGFSTTSGFTSF 110
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
V V N+++ MY K G A +F+ + D+ SWNT++SG+ N A + FVV M+
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALN-FVV--RMKS 167
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
+G+V D T LS C LG + VV+ L ++ V NS I MY
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG--LESDLVVGNSFITMYSRSGSF 225
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGG-AFQVLELFGQMFIGGAVPDEVTVISVLGA 267
GAR++F+ ++ KD +SWNSL+SG + G F+ + +F M G D V+ SV+
Sbjct: 226 RGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C + L L +H +K+GY VG L+S Y+ CG F+++ ++++ SW
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF-YKMT 386
T M++ +A+SIF M + P+E F +++A + + EG +I +
Sbjct: 346 TTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ EP+ + + L + L++A +++ + W A++S
Sbjct: 401 TGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREIIS-WNAMIS 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKA--DNFTYP 58
+ A+ F+ I F+ WN+MI G+A + S +L ++ LS + + +T+
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNG---FSHEALKMF---LSAAAETMPNEYTFG 476
Query: 59 FVLKACG---DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
VL A D+ +++ G R H ++ GL S V ++L+ MY K G++ + VF++M
Sbjct: 477 SVLNAIAFAEDISVKQ-GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
++ W +++S Y +G+ +F M + + D T L++L+AC
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTAC 585
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 269/541 (49%), Gaps = 6/541 (1%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD++ ++ N + G+ + VL + ML G D+ T VL C
Sbjct: 112 LFDEMPMRDVISQNIVFYGFL---RNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDT 167
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ +H L ++ G + ++ VGN LI+ Y K G + R VFD M R++ + +
Sbjct: 168 PEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAV 227
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+SG ++N D +F MRR + + T L+ L+AC + G+ +H + +
Sbjct: 228 ISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG- 286
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
+ + + ++++DMY C I A +FE D VS ++ G + G + ++ F
Sbjct: 287 -IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M G D V +VLG ++L LG +HS ++K+ + NT V LI+MY+ C
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
G + F +P ++ SW M+ F HG G A+ ++ EM + P + F ++L
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLL 465
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
ACSH GL+D+G+E+ +M + +EP T HY+C++D+LGRAG L EA + ID++ LKP+
Sbjct: 466 HACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD 525
Query: 427 EDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXX 486
+W ALL AC H + ++ E +A++LF+ P+ S ++ ++NIY++ +W
Sbjct: 526 CKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKR 585
Query: 487 XXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSV 546
S E+ H F D H Q++ IY L L + GY PD +
Sbjct: 586 MKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFI 645
Query: 547 L 547
L
Sbjct: 646 L 646
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 168/365 (46%), Gaps = 9/365 (2%)
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
V NSL+S+Y K G + A +FD+MP+RD+ S N + G+++N E FV+ M SG
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
D T+ +LS C + K +H + + V N +I Y C
Sbjct: 152 GF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSG--YDKEISVGNKLITSYFKCGCSVS 208
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
R +F+G++ ++ ++ ++ISG + L LF M G P+ VT +S L ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
++ G +H+ L K G + ++L+ MY+ CGS A F + S TV+
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 331 VTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYN 390
+ G +G EAI F ML + D V +AVL + GK++ + +
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL-HSLVIKRK 387
Query: 391 VEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISA 450
T + L+++ + G L ++ M K N W ++++A H + ++A
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH----GLAA 442
Query: 451 QKLFE 455
KL+E
Sbjct: 443 LKLYE 447
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 254/475 (53%), Gaps = 45/475 (9%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A I ++I N F NS+IR YA S+ + +L ++REML D +++ FVLKA
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSS---TPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C E G ++HGL + GL +DV+V N+L+++Y + G AR V D+MPVRD SW
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N+++S Y++ G +A +FD M + V +
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEE--------------------------RNVESW--- 240
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N MI Y + A+++F+ + V+D VSWN++++ Y G +VL
Sbjct: 241 ------------NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 244 ELFGQMFIGGA-VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
E+F +M PD T++SVL AC+ + +L G VH Y+ K G + + T+L+ M
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y+ CG A F + +++W +++ +HG G++A+ IF+EM+ + P+ F
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
VLSAC+H G++D+ +++F M+ Y VEPT HY C+VDLLGR GK++EA ++ +
Sbjct: 409 IGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ +LL AC+ ++ AE A +L E++ SGY +SN+YA++ RW
Sbjct: 469 ADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRW 523
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 15/235 (6%)
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
+S A + + + + NS+I Y L +F +M +G PD+ + VL A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C+ G +H +K G + V +L+++Y G F A + + +P + SW
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSW 209
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM-T 386
+++ + G EA ++F+EM +N+ + ++S + +GLV E KE+F M
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVES----WNFMISGYAAAGLVKEAKEVFDSMPV 265
Query: 387 RD---YNVEPTT-THYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
RD +N T H C ++L K+ +D+ KP+ ++LSAC
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKM------LDDSTEKPDGFTLVSVLSAC 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFG-QKADNFTYPFVL 61
+A+ +FD + ++ WN+M+ YA N L ++ +ML +K D FT VL
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYN---EVLEVFNKMLDDSTEKPDGFTLVSVL 311
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
AC L G VH + G+E + ++ +L+ MY K G + A VF RD++
Sbjct: 312 SACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVS 371
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+WN+++S +G DA +F M G +G T + +LSAC +
Sbjct: 372 TWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV------------- 418
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVS-WNSLISGYEKC 236
M+D ARKLFE ++ V+ T+ + ++ +
Sbjct: 419 ---------------GMLDQ---------ARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVI--SVLGACSRISALLLGSSVHSYLVK 286
G + EL ++ DE +++ S+LGAC R L + + L++
Sbjct: 455 GKIEEAEELVNEI-----PADEASILLESLLGACKRFGQLEQAERIANRLLE 501
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 258/462 (55%), Gaps = 6/462 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F I ++ W++MI Y AG + + SL +R+M+ K + T VL+
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYE-QAGQHDEAISL--FRDMMRIHIKPNAVTLTSVLQG 410
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + +G +H + +ES++ ++ISMY K G A F+++P++D ++
Sbjct: 411 CAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAF 470
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N + GY + G+A AF V+ +M+ G+ D TM+ +L C D G V+G +++
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV-KDTVSWNSLISGYEKCGGAFQV 242
+ + V +++I+M+ CD ++ A LF+ K TVSWN +++GY G A +
Sbjct: 531 HG--FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ F QM + P+ VT ++++ A + +SAL +G SVHS L++ G+ T VG SL+ M
Sbjct: 589 VATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDM 648
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG + + F EI +K + SW M++ + HG A+S+F M + PD F
Sbjct: 649 YAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSF 708
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
+VLSAC H+GLV+EGK IF +M + +E HY+C+VDLLG+AG EA + M+
Sbjct: 709 LSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMR 768
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGY 464
+K + VW ALL++ R+H N+ L+ + +L +++P S Y
Sbjct: 769 VKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 226/430 (52%), Gaps = 25/430 (5%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSF--------GQKADNF 55
+++IFD + LWNSMIRGY AG L+RE L F G D +
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYT-RAG---------LHREALGFFGYMSEEKGIDPDKY 101
Query: 56 TYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
++ F LKAC + + G+R+H L+ GLESDVY+G +L+ MY K D+ +AR VFDKM
Sbjct: 102 SFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKM 161
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
V+D+ +WNTM+SG +NG + A ++F MR + D ++ L+ A L + +
Sbjct: 162 HVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCR 221
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
+HG V++ + ++ +IDMYCNC + A +FE + KD SW ++++ Y
Sbjct: 222 CLHGLVIKKGFIFA----FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH 277
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G +VLELF M ++V S L A + + L+ G ++H Y V++G + +V
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
TSL+SMY+ CG A + F I D+ + SW+ M+ + G+ EAIS+F +M+ +I
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
P+ T+VL C+ GK I Y + D E T + ++ + + G+ A
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA--TAVISMYAKCGRFSPA 455
Query: 415 YATIDNMKLK 424
+ + +K
Sbjct: 456 LKAFERLPIK 465
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 218/463 (47%), Gaps = 14/463 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ K+ WN+M+ G A SS +L+L+ +M S D+ + ++ A
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLA---QNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNS-LISMYLKFGDMGTARLVFDKMPVRDLTS 122
L ++ +HGLV+ G ++ +S LI MY D+ A VF+++ +D +S
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W TMM+ Y NG + +FD MR + + + L A + DL G A+H Y V
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ L + V S++ MY C + A +LF + +D VSW+++I+ YE+ G +
Sbjct: 328 QQG--LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEA 385
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ LF M P+ VT+ SVL C+ ++A LG S+H Y +K T++ISM
Sbjct: 386 ISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM 445
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG F A +AF +P K ++ + G+ G +A ++ M + PD
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTM 505
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRD-YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+L C+ G ++ ++ + ++ E H L+++ + L A D
Sbjct: 506 VGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKC 563
Query: 422 KLKPNEDVWTALLSACRLHRNVK--LAEISAQKLFEMDPNKVS 462
+ + W +++ LH + +A K+ + PN V+
Sbjct: 564 GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 199/441 (45%), Gaps = 63/441 (14%)
Query: 67 LLLREMG-----IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
L+LRE ++VHG ++V GL+ N LI+ Y F +R++FD + +
Sbjct: 10 LMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVV 65
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
WN+M+ GY + G +A F +M G+ D + L AC MD K G +H
Sbjct: 66 LWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDL 125
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+ L ++ ++ ++++MYC + AR++F+ + VKD V+WN+++SG + G +
Sbjct: 126 IAEMG--LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
L LF M D V++ +++ A S++ + +H ++KKG+ A + LI
Sbjct: 184 AALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLI 241
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM---------- 350
MY NC A F E+ K +SW M+ + +G E + +F+ M
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Query: 351 -------------------------LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
+ + + D V T+++S S G ++ +++F +
Sbjct: 302 AAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI 361
Query: 386 TRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPNEDVWTALLSAC----- 437
D +V +S ++ +AG+ DEA + +M +KPN T++L C
Sbjct: 362 -EDRDV----VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416
Query: 438 -RLHRNVKLAEISAQKLFEMD 457
RL +++ I A E++
Sbjct: 417 SRLGKSIHCYAIKADIESELE 437
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 267/469 (56%), Gaps = 10/469 (2%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD+++ +++ + S+I C G + L+ +EM +G + +L C
Sbjct: 104 VFDEMLHRDTVSYCSIINS-CCQDGLLYEAMKLI--KEMYFYGFIPKSELVASLLALCTR 160
Query: 67 LLLREMGIRV-HGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWN 124
+ R+ H LV+VD ++ V + +L+ MYLKF D A VFD+M V++ SW
Sbjct: 161 MGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWT 220
Query: 125 TMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL-MDLKLGKAVHGYVVR 183
M+SG V N +F M+R L + T+L++L AC +L L K +HG+ R
Sbjct: 221 AMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFR 280
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ +E +T + + MYC C +S +R LFE V+D V W+S+ISGY + G +V+
Sbjct: 281 HGCH--ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
L QM G + VT+++++ AC+ + L S+VHS ++K G+ + +G +LI MY
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMY 398
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CGS A F E+ +K L SW+ M+ +G+HG G EA+ IF M+ D+ F
Sbjct: 399 AKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFL 458
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
A+LSAC+H+GLV+E + IF + + Y++ T HY+C ++LLGR GK+D+A+ NM +
Sbjct: 459 AILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPM 517
Query: 424 KPNEDVWTALLSACRLHRNVKLA-EISAQKLFEMDPNKVSGYVCLSNIY 471
KP+ +W++LLSAC H + +A +I A +L + +P+ + YV LS I+
Sbjct: 518 KPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIH 566
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 215/487 (44%), Gaps = 69/487 (14%)
Query: 37 RSLVLYR-EMLSFGQKADNFTYPFVLKACGDLLLRE---MGIRVHGLVVVDGLESDVYVG 92
+L LY+ ++ S G P V+KAC +E +G ++H L + G + D V
Sbjct: 28 EALRLYKLKIHSLGTNGFTAILPSVIKACA--FQQEPFLLGAQLHCLCLKAGADCDTVVS 85
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
NSLISMY KF R VFD+M RD S+ ++++ ++G +A + M G +
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 153 GDGTTMLALLSACGDL-MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
+ +LL+ C + K+ + H V+ + R+ + ++ +++DMY D + A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDE-RMQESVLLSTALVDMYLKFDDHAAA 204
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
+F+ + VK+ VSW ++ISG ++LF M P+ VT++SVL AC +
Sbjct: 205 FHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVEL 264
Query: 272 SALLLGSS----VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
+ GSS +H + + G + + + ++MY CG+ + F + + W
Sbjct: 265 N---YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMW 321
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS--------------- 372
+ M++G+ G E +++ N+M + I + A++SAC++S
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 373 --------------------GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
G + +E+FY++T E +S +++ G G
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-----EKDLVSWSSMINAYGLHGHGS 436
Query: 413 EAYATIDNMKLKPNEDV----WTALLSACRLHRNVKLAEISAQKLFEMD-----PNKVSG 463
EA M +K +V + A+LSAC + L E AQ +F P +
Sbjct: 437 EALEIFKGM-IKGGHEVDDMAFLAILSAC---NHAGLVE-EAQTIFTQAGKYHMPVTLEH 491
Query: 464 YVCLSNI 470
Y C N+
Sbjct: 492 YACYINL 498
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
++++F+ ++ +W+SMI GYA + S + L +M G +A++ T ++ A
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETG---DCSEVMNLLNQMRKEGIEANSVTLLAIVSA 362
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + L VH ++ G S + +GN+LI MY K G + AR VF ++ +DL SW
Sbjct: 363 CTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSW 422
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
++M++ Y +G +A +F M + G D LA+LSAC
Sbjct: 423 SSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 251/458 (54%), Gaps = 8/458 (1%)
Query: 20 NSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGL 79
N MI ++ S +++ L+ ML G + D F+ +L L +G +VHG
Sbjct: 422 NVMITSFSQS---KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL---NLGKQVHGY 475
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDA 139
+ GL D+ VG+SL ++Y K G + + +F +P +D W +M+SG+ + G +A
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 140 FVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMI 199
+F M G D +T+ A+L+ C L GK +HGY +R + + ++++
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR--AGIDKGMDLGSALV 593
Query: 200 DMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEV 259
+MY C + AR++++ L D VS +SLISGY + G LF M + G D
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 260 TVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI 319
+ S+L A + LG+ VH+Y+ K G +VG+SL++MY+ GS +AF++I
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 320 PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
L +WT ++ + HGK EA+ ++N M K PD+ F VLSACSH GLV+E
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 380 EIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRL 439
M +DY +EP HY C+VD LGR+G+L EA + I+NM +KP+ VW LL+AC++
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 440 HRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
H V+L +++A+K E++P+ Y+ LSNI A W
Sbjct: 834 HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEW 871
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 205/448 (45%), Gaps = 36/448 (8%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A +FD I + N MI GY SL + +M G +A+ +Y V
Sbjct: 100 MADAAKLFDTIPQPDVVSCNIMISGYK---QHRLFEESLRFFSKMHFLGFEANEISYGSV 156
Query: 61 LKACGDL---LLREMGIRVHGLV-------VVDGLESDVYVGNSLISMYLKFGDMGTARL 110
+ AC L L E+ + H + VV+ DV+ N L+F D A
Sbjct: 157 ISACSALQAPLFSEL-VCCHTIKMGYFFYEVVESALIDVFSKN------LRFED---AYK 206
Query: 111 VFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMD 170
VF ++ WNT+++G ++N G F +F M D T ++L+AC L
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 171 LKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLI 230
L+ GK V V++ + + FV +++D+Y C ++ A ++F + VSW ++
Sbjct: 267 LRFGKVVQARVIKCG---AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 231 SGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYG 290
SGY K AF LE+F +M G + TV SV+ AC R S + S VH+++ K G+
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 291 MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT-VMVTGFGIHGKGREAISIFNE 349
++++V +LISMY+ G + + F ++ D + VM+T F K +AI +F
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTR 443
Query: 350 MLGKNITPDEGVFTAVLSA--CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
ML + + DE ++LS C + G G + + D V S L L +
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------SSLFTLYSK 497
Query: 408 AGKLDEAYATIDNMKLKPNEDVWTALLS 435
G L+E+Y + K N W +++S
Sbjct: 498 CGSLEESYKLFQGIPFKDNA-CWASMIS 524
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 190/423 (44%), Gaps = 42/423 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ ++ +F I FK++ W SMI G+ ++ L+ EML G D T V
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGF---NEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L C G +HG + G++ + +G++L++MY K G + AR V+D++P D
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
S ++++SGY ++G D F++F M SG D + ++L A + LG VH Y
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+ + L V +S++ MY I K F + D ++W +LI+ Y + G A
Sbjct: 678 ITKIG--LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ L+++ M G PD+VT + VL ACS L+ S H + K YG+
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSH-GGLVEESYFHLNSMVKDYGIE-------- 786
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
P+ + MV G G+ REA S N M +I PD
Sbjct: 787 -------------------PENR--HYVCMVDALGRSGRLREAESFINNM---HIKPDAL 822
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT-HYSCLVDLLGRAGKLDEAYATID 419
V+ +L+AC G V+ GK + +EP+ Y L ++L G+ DE T
Sbjct: 823 VWGTLLAACKIHGEVELGK---VAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRK 879
Query: 420 NMK 422
MK
Sbjct: 880 LMK 882
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 3/297 (1%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFD 144
L DV++ SL+S Y G M A +FD +P D+ S N M+SGY ++ ++ F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 145 HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN 204
M G + + +++SAC L + V + ++ E V +++ID++
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF--YEVVESALIDVFSK 197
Query: 205 CDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
A K+F + WN++I+G + V +LF +M +G PD T SV
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSV 257
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L AC+ + L G V + ++K G + V T+++ +YA CG A F+ IP+ S+
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEI 381
SWTVM++G+ A+ IF EM + + T+V+SAC +V E ++
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 8/270 (2%)
Query: 168 LMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWN 227
L +L+ K + +++R L + F+T S++ Y N ++ A KLF+ + D VS N
Sbjct: 61 LCNLRTTKILQAHLLRRY-LLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCN 119
Query: 228 SLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKK 287
+ISGY++ + L F +M G +E++ SV+ ACS + A L V + +K
Sbjct: 120 IMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 288 GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIF 347
GY V ++LI +++ F A++ F + ++ W ++ G + +F
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 348 NEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
+EM PD +++VL+AC+ + GK + ++ + + + +VDL +
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC--TAIVDLYAK 297
Query: 408 AGKLDEAYATIDNMKLKPNEDV--WTALLS 435
G + EA + PN V WT +LS
Sbjct: 298 CGHMAEAMEVFSRI---PNPSVVSWTVMLS 324
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 253/489 (51%), Gaps = 33/489 (6%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+H ++ + D +V LI + + A VF + ++ + M+ G+V +G
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR------------ 183
+ D ++ M + ++ D + ++L AC DLK+ + +H V++
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK 163
Query: 184 ------NSGRLSN-----------NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
SG L N + MI+ Y C FI A +LF+ + +KDTV W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
++I G + + LELF +M + +E T + VL ACS + AL LG VHS++
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
+ ++ VG +LI+MY+ CG A R F + DK + S+ M++G +HG EAI+
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
F +M+ + P++ A+L+ACSH GL+D G E+F M R +NVEP HY C+VDLLG
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 407 RAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVC 466
R G+L+EAY I+N+ ++P+ + LLSAC++H N++L E A++LFE + YV
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 463
Query: 467 LSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAK 526
LSN+YA+ +W P S E++ +H+F GD +H + IY +
Sbjct: 464 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQR 523
Query: 527 LKDLNEQLK 535
L++LN L+
Sbjct: 524 LQELNRILR 532
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 196/447 (43%), Gaps = 75/447 (16%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F + N +L+ +MI G+ S S+ + LY M+ DN+ VLKAC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSG---RSADGVSLYHRMIHNSVLPDNYVITSVLKACDL 139
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP---------- 116
+ RE +H V+ G S VG ++ +Y K G++ A+ +FD+MP
Sbjct: 140 KVCRE----IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 117 ---------------------VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDG 155
++D W M+ G V+N E A +F M+ + +
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 156 TTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF 215
T + +LSAC DL L+LG+ VH +V LSN FV N++I+MY C I+ AR++F
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSN--FVGNALINMYSRCGDINEARRVF 313
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
+ KD +S+N++ISG G + + + F M G P++VT++++L ACS L
Sbjct: 314 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLD 373
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFG 335
+G V F R FN P + + +V G
Sbjct: 374 IGLEV----------------------------FNSMKRVFNVEP--QIEHYGCIVDLLG 403
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
G+ EA + I PD + +LSAC G ++ G++I ++ N P +
Sbjct: 404 RVGRLEEAYRFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDS 458
Query: 396 THYSCLVDLLGRAGKLDEAYATIDNMK 422
Y L +L +GK E+ ++M+
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMR 485
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 5/175 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A +F + K++ W +MI G + N ++L L+REM A+ FT V
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMN---KALELFREMQMENVSANEFTAVCV 261
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC DL E+G VH V +E +VGN+LI+MY + GD+ AR VF M +D+
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC--GDLMDLKL 173
S+NTM+SG +G + +A F M G + T++ALL+AC G L+D+ L
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 67/326 (20%)
Query: 260 TVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI 319
T+ISVL +C I+ + S+H+ +++ + + V LI + + S A+ F+ +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 320 PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS-------HS 372
+ ++ +T M+ GF G+ + +S+++ M+ ++ PD V T+VL AC H+
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 373 GLVDEG-----------KEIFYKMTRDYNVE------PTTTHYSC--LVDLLGRAGKLDE 413
++ G EI+ K N + P H + +++ G + E
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 414 AYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLF-EMDPNKVSG----YVCL- 467
A ++K+K + WTA++ L RN ++ + A +LF EM VS VC+
Sbjct: 208 ALELFQDVKIK-DTVCWTAMIDG--LVRNKEMNK--ALELFREMQMENVSANEFTAVCVL 262
Query: 468 ---SNIYAAE-KRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDI 523
S++ A E RW +SF E +M F G+ ++
Sbjct: 263 SACSDLGALELGRWV-------------------HSFVENQRMELSNFVGNA----LINM 299
Query: 524 YAKLKDLNEQLKKVGYMPDTSSVLYD 549
Y++ D+NE + M D + Y+
Sbjct: 300 YSRCGDINEARRVFRVMRDKDVISYN 325
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 294/548 (53%), Gaps = 21/548 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLK 62
A+ +FD++ ++ W+ +IR Y S L L++EM+ + + D T VLK
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQS---KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLK 234
Query: 63 ACGDLLLREMGIRVHGLVVVDGLE-SDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
AC + ++G VHG + G + +DV+V NSLI MY K D+ +A VFD+ R++
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWN++++G+V N +A +F M + + D T+++LL C K++HG +
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+R +NE +S+ID Y +C + A + + + KD VS +++ISG G + +
Sbjct: 355 IRRG--YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN-TAVGTSLI 300
+ +F M P+ +TVIS+L ACS + L H +++ +N +VGTS++
Sbjct: 413 AISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
YA CG+ A R F++I +K++ SWTV+++ + I+G +A+++F+EM K TP+
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAV 529
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
+ A LSAC+H GLV +G IF M + + +P+ HYSC+VD+L RAG++D A I N
Sbjct: 530 TYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKN 588
Query: 421 MK--LKPNEDVWTALLSAC--RLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKR 476
+ +K W A+LS C R + + +E+ A+ L E++P SGY+ S+ +AAEK
Sbjct: 589 LPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL-ELEPLCSSGYLLASSTFAAEKS 647
Query: 477 WXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
W YS + +F AGD QSD ++L D+ + L +
Sbjct: 648 WEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD-KLSQSD---SELNDVVQSLHR 703
Query: 537 VGYMPDTS 544
+ DT+
Sbjct: 704 CMKLDDTA 711
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 222/468 (47%), Gaps = 22/468 (4%)
Query: 8 FDQIVFKNSFLWNSMIRG---YACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC 64
FD + ++S WN ++ G Y G L + ++ +G + + T V+ AC
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEG------LWWFSKLRVWGFEPNTSTLVLVIHAC 137
Query: 65 GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWN 124
L G ++HG V+ G V NS++ MY D +AR +FD+M RD+ SW+
Sbjct: 138 RSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWS 194
Query: 125 TMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
++ YV++ E +F M + D T+ ++L AC + D+ +G++VHG+ +R
Sbjct: 195 VVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIR 254
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
L++ FV NS+IDMY + A ++F+ ++ VSWNS+++G+ + L
Sbjct: 255 RGFDLAD-VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEAL 313
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
E+F M DEVTV+S+L C L S+H ++++GY N +SLI Y
Sbjct: 314 EMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAY 373
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
+C A + + K + S + M++G G+ EAISIF M TP+
Sbjct: 374 TSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVI 430
Query: 364 AVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
++L+ACS S + K + R + + S +VD + G ++ A T D +
Sbjct: 431 SLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS-IVDAYAKCGAIEMARRTFDQIT 489
Query: 423 LKPNEDVWTALLSACRLH--RNVKLAEISAQKLFEMDPNKVSGYVCLS 468
K N WT ++SA ++ + LA K PN V+ LS
Sbjct: 490 EK-NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALS 536
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 205/445 (46%), Gaps = 69/445 (15%)
Query: 42 YREMLSFG-QKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYL 100
Y E+ G Q D F +P V KAC L S ++ GNS+ Y+
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKL-------------------SWLFQGNSIADFYM 72
Query: 101 KFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLA 160
K GD+ + FD M RD SWN ++ G + G + F +R G + +T++
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVL 132
Query: 161 LLSACGDL-MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA 219
++ AC L D G+ +HGYV+R+ V NS++ MY + D +S ARKLF+ ++
Sbjct: 133 VIHACRSLWFD---GEKIHGYVIRSG--FCGISSVQNSILCMYADSDSLS-ARKLFDEMS 186
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGS 278
+D +SW+ +I Y + L+LF +M PD VTV SVL AC+ + + +G
Sbjct: 187 ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGR 246
Query: 279 SVHSYLVKKGYGM-NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
SVH + +++G+ + + V SLI MY+ A R F+E +++ SW ++ GF +
Sbjct: 247 SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN 306
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSAC---------------------------- 369
+ EA+ +F+ M+ + + DE ++L C
Sbjct: 307 QRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL 366
Query: 370 -------SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
+ LVD+ + MT V +T ++ L AG+ DEA + +M+
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST-----MISGLAHAGRSDEAISIFCHMR 421
Query: 423 LKPNEDVWTALLSACRLHRNVKLAE 447
PN +LL+AC + +++ ++
Sbjct: 422 DTPNAITVISLLNACSVSADLRTSK 446
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 250/441 (56%), Gaps = 36/441 (8%)
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
G ++H ++ G + D+ + L+ ++LK G + AR VFD++P L+++N M+SGY+K
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGD-----LMDLKLGKAVHGYVVR---- 183
+G + ++ M SG DG T+ +L A ++ L + VH +++
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 184 --------------NSGRLSN-----------NEFVTNSMIDMYCNCDFISGARKLFEGL 218
SG+L + N SMI Y N F+ A ++F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 219 AVKDTVSWNSLISGYEKCG-GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLG 277
VKD V +N+++ G+ + G A + ++++ M G P+ T SV+GACS +++ +G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
VH+ ++K G + +G+SL+ MYA CG A R F+++ +K++ SWT M+ G+G +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH 397
G EA+ +F M I P+ F LSACSHSGLVD+G EIF M RDY+++P H
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMD 457
Y+C+VDL+GRAG L++A+ M +P+ D+W ALLS+C LH NV+LA I+A +LF+++
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 458 PNKVSG-YVCLSNIYAAEKRW 477
+K G Y+ LSN+YA+ +W
Sbjct: 473 ADKRPGAYLALSNVYASNDKW 493
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 184/416 (44%), Gaps = 74/416 (17%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSF-GQKADNFTYPFVLK 62
A+ +FD++ +N MI GY + + L+L + +S+ G+KAD +T VLK
Sbjct: 88 ARQVFDELPKPTLSAYNYMISGYL----KHGLVKELLLLVQRMSYSGEKADGYTLSMVLK 143
Query: 63 ACGD-----LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
A +L R + VH ++ +E D + +L+ Y+K G + +AR VF+ M
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFD--------------------------------H 145
++ +M+SGY+ G DA +F+
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M+R+G + +T +++ AC L ++G+ VH +++ SG ++ + + +S++DMY C
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMK-SGVYTHIK-MGSSLLDMYAKC 321
Query: 206 DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
I+ AR++F+ + K+ SW S+I GY K G + LELF +M P+ VT + L
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA------------- 312
ACS HS LV KGY + ++ SM + C
Sbjct: 382 SACS-----------HSGLVDKGYEIFESMQRDY-SMKPKMEHYACIVDLMGRAGDLNKA 429
Query: 313 ---HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
RA E PD + W +++ +HG A +E+ N G + A+
Sbjct: 430 FEFARAMPERPDSDI--WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLAL 483
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 260/472 (55%), Gaps = 8/472 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A IF+ + N F++N+MIRGY+ S + R+ ++ ++ + G D F++ LK+
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSIS---DEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR-DLTS 122
C L +G +HG+ + G + N+LI Y G + AR VFD+MP D +
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
++T+M+GY++ + A +F MR+S +V + +T+L+ LSA DL DL ++ H +
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI 254
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ L + + ++I MY IS AR++F+ KD V+WN +I Y K G +
Sbjct: 255 KIG--LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEEC 312
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ L QM P+ T + +L +C+ A +G +V L ++ ++ +GT+L+ M
Sbjct: 313 VWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDM 372
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN--ITPDEG 360
YA G A FN + DK + SWT M++G+G HG REA+++FN+M +N + P+E
Sbjct: 373 YAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI 432
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
F VL+ACSH GLV EG F +M Y+ P HY C+VDLLGRAG+L+EAY I N
Sbjct: 433 TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN 492
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYA 472
+ + + W ALL+ACR++ N L E +L EM + + L+ +A
Sbjct: 493 LPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHA 544
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 203/413 (49%), Gaps = 13/413 (3%)
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L++C D + E+ R+HG +V GL+ D + + L++ + D+ A +F+ + +L
Sbjct: 35 LRSCRDTV--EVS-RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNL 90
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+NTM+ GY + E AF VF+ +R GL D + + L +C + + +G+ +HG
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGA 239
+R+ + + + N++I YC C IS ARK+F+ + D V++++L++GY +
Sbjct: 151 ALRSGFMVFTD--LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKK 208
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
L+LF M V + T++S L A S + L S H +K G ++ + T+L
Sbjct: 209 ALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITAL 268
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I MY G A R F+ K + +W M+ + G E + + +M + + P+
Sbjct: 269 IGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNS 328
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F +LS+C++S G+ + + + + + LVD+ + G L++A +
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE----MDPNKVSGYVCLS 468
MK K + WTA++S H + A K+ E + PN+++ V L+
Sbjct: 388 RMKDKDVKS-WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 258/479 (53%), Gaps = 13/479 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLY---REMLSFGQKADNFTYPFV 60
A +FD++ +N WN +I G G+++ R+ + + +L D+ ++ +
Sbjct: 90 ADKLFDEMPLRNIVTWNILIHG-VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGL 148
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
++ C D + GI++H L+V GLES + SL+ Y K G + AR VF+ + RDL
Sbjct: 149 IRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDL 208
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHM--RRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
WN ++S YV NG +AF + M ++ GD T +LLSAC ++ GK +H
Sbjct: 209 VLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIH 264
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
+ + S + V ++++MY + +S AR+ FE + V++ VSWN++I G+ + G
Sbjct: 265 AILFKVSYQFDIP--VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE 322
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ + LFGQM + PDE+T SVL +C++ SA+ V + + KKG +V S
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANS 382
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
LIS Y+ G+ A F+ I + L SWT ++ HG E++ +F ML K + PD
Sbjct: 383 LISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPD 441
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
+ F VLSACSH GLV EG F +MT Y +E HY+CL+DLLGRAG +DEA +
Sbjct: 442 KITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
++M +P+ A C +H + + A+KL E++P K Y LSN Y +E W
Sbjct: 502 NSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHW 560
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 207/407 (50%), Gaps = 30/407 (7%)
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK---- 132
HG +V G+ + +++ N L+ Y K + A +FD+MP+R++ +WN ++ G ++
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 133 -NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
N A F + + + D + + L+ C D ++K G +H +V+ L ++
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG--LESS 176
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG---GAFQVLELFG- 247
F + S++ Y C I AR++FE + +D V WN+L+S Y G AF +L+L G
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 248 --QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F G D T S+L AC RI G +H+ L K Y + V T+L++MYA
Sbjct: 237 DKNRFRG----DYFTFSSLLSAC-RIEQ---GKQIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
A F + +++ SW M+ GF +G+GREA+ +F +ML +N+ PDE F +V
Sbjct: 289 SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASV 348
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
LS+C+ + E K++ +T+ + + + S L+ R G L EA +++ +P
Sbjct: 349 LSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANS-LISSYSRNGNLSEALLCFHSIR-EP 406
Query: 426 NEDVWTALLSACRLH----RNVKLAEISAQKLFEMDPNKVSGYVCLS 468
+ WT+++ A H ++++ E QKL P+K++ LS
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESMLQKL---QPDKITFLEVLS 450
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 10/268 (3%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLY-REMLSFGQKADNFTYPFVL 61
+A+ +F+ ++ ++ LWN+++ Y + + + L L + F + D FT+ +L
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRF--RGDYFTFSSLL 252
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
AC E G ++H ++ + D+ V +L++MY K + AR F+ M VR++
Sbjct: 253 SACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVV 308
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWN M+ G+ +NGE +A +F M L D T ++LS+C + K V V
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+ ++ V NS+I Y +S A F + D VSW S+I G A +
Sbjct: 369 TKKGS--ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEE 426
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACS 269
L++F M + PD++T + VL ACS
Sbjct: 427 SLQMFESM-LQKLQPDKITFLEVLSACS 453
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ F+ +V +N WN+MI G+A + G + R L+ +ML + D T+ V
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMR---LFGQMLLENLQPDELTFASV 348
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L +C +V +V G + V NSLIS Y + G++ A L F + DL
Sbjct: 349 LSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDL 408
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
SW +++ +G A ++ +F+ M + L D T L +LSAC
Sbjct: 409 VSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSAC 452
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 274/534 (51%), Gaps = 12/534 (2%)
Query: 8 FDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDL 67
F +I NS WN++I G+ ++ L L + D T+ +L D
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME--MKAAVTMDAGTFAPLLTLLDDP 216
Query: 68 LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP-VRDLTSWNTM 126
+ + +VH V+ GL+ ++ + N++IS Y G + A+ VFD + +DL SWN+M
Sbjct: 217 MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
++G+ K+ AF +F M+R + D T LLSAC GK++HG V++
Sbjct: 277 IAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG- 335
Query: 187 RLSNNEFVTNSMIDMYCNCDFISG----ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
L TN++I MY F +G A LFE L KD +SWNS+I+G+ + G +
Sbjct: 336 -LEQVTSATNALISMYIQ--FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
++ F + D+ ++L +CS ++ L LG +H+ K G+ N V +SLI M
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 303 YANCGSFLCAHRAFNEIPDK-SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
Y+ CG A + F +I K S +W M+ G+ HG G+ ++ +F++M +N+ D
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 512
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
FTA+L+ACSH+GL+ EG E+ M Y ++P HY+ VDLLGRAG +++A I++M
Sbjct: 513 FTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXX 481
L P+ V L CR +++A A L E++P YV LS++Y+ K+W
Sbjct: 573 PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKA 632
Query: 482 XXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLK 535
P +S+ E+ V F A D S+ DIY +KDL ++++
Sbjct: 633 SVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 213/435 (48%), Gaps = 10/435 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A ++FD++ ++S WN+MI GY S G + L+ M G D +++ +LK
Sbjct: 54 ANMLFDEMPKRDSVSWNTMISGYT-SCG--KLEDAWCLFTCMKRSGSDVDGYSFSRLLKG 110
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
+ ++G +VHGLV+ G E +VYVG+SL+ MY K + A F ++ + SW
Sbjct: 111 IASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSW 170
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMR-RSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
N +++G+V+ + AF + M ++ + D T LL+ D M L K VH V+
Sbjct: 171 NALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL 230
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGL-AVKDTVSWNSLISGYEKCGGAFQ 241
+ L + + N+MI Y +C +S A+++F+GL KD +SWNS+I+G+ K
Sbjct: 231 KLG--LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKES 288
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
ELF QM D T +L ACS + G S+H ++KKG T+ +LIS
Sbjct: 289 AFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALIS 348
Query: 302 MYAN--CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
MY G+ A F + K L SW ++TGF G +A+ F+ + I D+
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
F+A+L +CS + G++I T+ V S L+ + + G ++ A
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV-ISSLIVMYSKCGIIESARKCFQ 467
Query: 420 NMKLKPNEDVWTALL 434
+ K + W A++
Sbjct: 468 QISSKHSTVAWNAMI 482
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 181/357 (50%), Gaps = 15/357 (4%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
H + G SD+YV N ++ Y+KFG +G A ++FD+MP RD SWNTM+SGY G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
DA+ +F M+RSG DG + LL + LG+ VHG V++ G N +V
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK--GGYECNVYVG 139
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
+S++DMY C+ + A + F+ ++ ++VSWN+LI+G+ + L G M + AV
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 256 P-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
D T +L L VH+ ++K G + ++IS YA+CGS A R
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 315 AFNEI-PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
F+ + K L SW M+ GF H A +F +M + D +T +LSACS
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS--- 316
Query: 374 LVDEGKEIFYK----MTRDYNVEPTTTHYSCLVDLLGR--AGKLDEAYATIDNMKLK 424
E +IF K M +E T+ + L+ + + G +++A + +++K K
Sbjct: 317 --GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 4/266 (1%)
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
H Y ++ G +S+ +V+N ++D Y F+ A LF+ + +D+VSWN++ISGY C
Sbjct: 22 THCYAIK-CGSISDI-YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
G LF M G+ D + +L + + LG VH ++K GY N VG
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM-LGKNI 355
+SL+ MYA C A AF EI + + SW ++ GF + A + M + +
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
T D G F +L+ + K++ K+ + ++ T + ++ G + +A
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK-LGLQHEITICNAMISSYADCGSVSDAK 258
Query: 416 ATIDNMKLKPNEDVWTALLSACRLHR 441
D + + W ++++ H
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHE 284
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A +F+ + K+ WNS+I G+ A S ++ + + S K D++ + +
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGF---AQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L++C DL ++G ++H L G S+ +V +SLI MY K G + +AR F ++ +
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 121 T-SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
T +WN M+ GY ++G + +F M + D T A+L+AC
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 520
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
S H Y +K G + V ++ Y G A+ F+E+P + SW M++G+
Sbjct: 20 SLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH 397
GK +A +F M D F+ +L + D G+++ + + E
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV-HGLVIKGGYECNVYV 138
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
S LVD+ + ++++A+ + +PN W AL++ R++K A
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTA 186
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 262/481 (54%), Gaps = 19/481 (3%)
Query: 4 AQLIFDQ--IVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVL 61
A L+F++ + ++ +N +I G A G SL+++R+ML + + T+ V+
Sbjct: 243 ACLVFEETDVAVRDQVTFNVVIDGLA----GFKRDESLLVFRKMLEASLRPTDLTFVSVM 298
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
+C MG +VHGL + G E V N+ ++MY F D G A VF+ + +DL
Sbjct: 299 GSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLV 355
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+WNTM+S Y + A V+ M G+ D T +LL+ +DL + + V +
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEMVQACI 412
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
++ LS+ ++N++I Y I A LFE K+ +SWN++ISG+ G F+
Sbjct: 413 IKFG--LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFE 470
Query: 242 VLELFGQMFIGGA--VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
LE F + +PD T+ ++L C S+L+LGS H+Y+++ G T +G +L
Sbjct: 471 GLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNAL 530
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPD 358
I+MY+ CG+ + FN++ +K + SW +++ + HG+G A++ + M + + PD
Sbjct: 531 INMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPD 590
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA-- 416
F+AVLSACSH+GLV+EG EIF M + V H+SCLVDLLGRAG LDEA +
Sbjct: 591 AATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV 650
Query: 417 TIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKR 476
I + DVW AL SAC H ++KL ++ A+ L E + + S YV LSNIYA
Sbjct: 651 KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGM 710
Query: 477 W 477
W
Sbjct: 711 W 711
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 210/475 (44%), Gaps = 62/475 (13%)
Query: 7 IFDQIVFKNSF-LWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACG 65
+FD++ ++ +WN+MI G C G + S+ L+REM G + D F + +L C
Sbjct: 145 VFDKMPERDDVAIWNAMITG--CKESGYHET-SVELFREMHKLGVRHDKFGFATILSMC- 200
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDK--MPVRDLTSW 123
D + G +VH LV+ G V N+LI+MY + A LVF++ + VRD ++
Sbjct: 201 DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTF 260
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N ++ G + + ++ +VF M + L T ++++ +C +G VHG ++
Sbjct: 261 NVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIK 316
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
V+N+ + MY + + A K+FE L KD V+WN++IS Y + +
Sbjct: 317 TG--YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
++ +M I G PDE T S+L + L + V + ++K G + +LIS Y
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAY 431
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN--ITPDEGV 361
+ G A F K+L SW +++GF +G E + F+ +L I PD
Sbjct: 432 SKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYT 491
Query: 362 FTAVLSAC-----------------------------------SHSGLVDEGKEIFYKMT 386
+ +LS C S G + E+F +M+
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS 551
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM----KLKPNEDVWTALLSAC 437
E ++ L+ R G+ + A T M K+ P+ ++A+LSAC
Sbjct: 552 -----EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 191/422 (45%), Gaps = 52/422 (12%)
Query: 51 KADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARL 110
+ D ++ + L G +VH + GL +V N+L+S+Y + G++ + +
Sbjct: 54 RPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKK 113
Query: 111 VFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFD-------------------------- 144
FD++ D+ SW T++S K G+ AF VFD
Sbjct: 114 KFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHET 173
Query: 145 ------HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
M + G+ D +LS C D L GK VH V++ ++++ V N++
Sbjct: 174 SVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASS--VVNAL 230
Query: 199 IDMYCNCDFISGARKLFE--GLAVKDTVSWNSLISGYEKCGGAF---QVLELFGQMFIGG 253
I MY NC + A +FE +AV+D V++N +I G F + L +F +M
Sbjct: 231 ITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL----AGFKRDESLLVFRKMLEAS 286
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
P ++T +SV+G+C S +G VH +K GY T V + ++MY++ F AH
Sbjct: 287 LRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
+ F + +K L +W M++ + G+ A+S++ M + PDE F ++L+
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTAL 433
+++ + K +E + + L+ + G++++A + L+ N W A+
Sbjct: 404 VLEMVQACIIKFGLSSKIEIS----NALISAYSKNGQIEKADLLFER-SLRKNLISWNAI 458
Query: 434 LS 435
+S
Sbjct: 459 IS 460
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSR--SLVLYREMLSFGQKADNFTYP 58
+ +A L+F++ + KN WN++I G+ + S +L E+ D +T
Sbjct: 437 IEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL---PDAYTLS 493
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+L C +G + H V+ G + +GN+LI+MY + G + + VF++M +
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK 553
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG-LVGDGTTMLALLSACGDLMDLKLGKAV 177
D+ SWN+++S Y ++GE +A + M+ G ++ D T A+LSAC ++ G +
Sbjct: 554 DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613
Query: 178 HGYVVRNSGRLSN 190
+V G + N
Sbjct: 614 FNSMVEFHGVIRN 626
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 245/477 (51%), Gaps = 36/477 (7%)
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
++Y N+++S Y+K G + AR+VFD MP RD+ SWNTM+ GY ++G +A + R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 148 RSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
RSG+ + + LL+AC L+L + HG V+ +G LSN ++ S+ID Y C
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL-VAGFLSN-VVLSCSIIDAYAKCGQ 229
Query: 208 ISGARKLFEGLAVKD-------------------------------TVSWNSLISGYEKC 236
+ A++ F+ + VKD VSW +LI+GY +
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
G + L+LF +M G P++ T S L A + I++L G +H Y+++ N V
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDK-SLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
+SLI MY+ GS + R F DK W M++ HG G +A+ + ++M+ +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
P+ +L+ACSHSGLV+EG F MT + + P HY+CL+DLLGRAG E
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 416 ATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEK 475
I+ M +P++ +W A+L CR+H N +L + +A +L ++DP + Y+ LS+IYA
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 476 RWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQS--DDIYAKLKDL 530
+W + S+ E+ K V F D SH + ++IY L +L
Sbjct: 530 KWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 174/388 (44%), Gaps = 52/388 (13%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+++FD + ++ WN+M+ GYA GN +L Y+E G K + F++ +L
Sbjct: 131 RARVVFDSMPERDVVSWNTMVIGYA--QDGNLHE-ALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC ++ + HG V+V G S+V + S+I Y K G M +A+ FD+M V+D+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRR----------SGLVGDGT---------TMLAL-- 161
W T++SGY K G+ A +F M +G V G+ M+AL
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 162 ----------LSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
L A + L+ GK +HGY++R + R N V +S+IDMY + +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR--PNAIVISSLIDMYSKSGSLEAS 365
Query: 212 RKLFEGLAVK-DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
++F K D V WN++IS + G + L + M P+ T++ +L ACS
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
Query: 271 ISALLLGSS-VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI---PDKSLAS 326
+ G S V+ G + LI + G F R E+ PDK +
Sbjct: 426 SGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI-- 483
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKN 354
W ++ IHG NE LGK
Sbjct: 484 WNAILGVCRIHG---------NEELGKK 502
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 172/423 (40%), Gaps = 71/423 (16%)
Query: 115 MPV-----RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLM 169
MP+ R + + +S + E A + + + G+ + +LL CGD
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC----------------------DF 207
LK GK +H ++ + +G N ++N +I MY C +
Sbjct: 61 SLKQGKWIHRHL-KITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNM 119
Query: 208 ISG---------ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDE 258
+SG AR +F+ + +D VSWN+++ GY + G + L + + G +E
Sbjct: 120 VSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNE 179
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN- 317
+ +L AC + L L H ++ G+ N + S+I YA CG A R F+
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 318 ------------------------------EIPDKSLASWTVMVTGFGIHGKGREAISIF 347
E+P+K+ SWT ++ G+ G G A+ +F
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 348 NEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
+M+ + P++ F++ L A + + GKEI M R NV P S L+D+ +
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSK 358
Query: 408 AGKLDEAYATIDNMKLKPNEDVWTALLSACRLH--RNVKLAEISAQKLFEMDPNKVSGYV 465
+G L+ + K + W ++SA H + L + F + PN+ + V
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 466 CLS 468
L+
Sbjct: 419 ILN 421
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +F ++ KN W ++I GY GN R+L L+R+M++ G K + FT+
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGN---RALDLFRKMIALGVKPEQFTFSSC 317
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF----DKMP 116
L A + G +HG ++ + + V +SLI MY K G + + VF DK
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK-- 375
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
D WNTM+S ++G A + D M + + + TT++ +L+AC
Sbjct: 376 -HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNAC 423
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 267/483 (55%), Gaps = 13/483 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYA-CSAGGNSSSRSLVLYREMLSFGQKADNFTYPF 59
+ A+ +FD+I ++ W +MI ++ C ++ L+L++EM KA+ FTY
Sbjct: 63 VKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDA----LLLFKEMHREDVKANQFTYGS 118
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
VLK+C DL + G+++HG V ++ V ++L+S+Y + G M ARL FD M RD
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
L SWN M+ GY N A +F +F M G D T +LL A + L++ +HG
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 180 YVVR-NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY-EKCG 237
++ GR S + S+++ Y C ++ A KL EG +D +S +LI+G+ ++
Sbjct: 239 LAIKLGFGRSSA---LIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNN 295
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY-GMNTAVG 296
++F M DEV V S+L C+ I+++ +G +H + +K + A+G
Sbjct: 296 CTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG 355
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
SLI MYA G A AF E+ +K + SWT ++ G+G HG +AI ++N M + I
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
P++ F ++LSACSH+G + G +I+ M + +E H SC++D+L R+G L+EAYA
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 417 TIDNMK--LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAE 474
I + + + + W A L ACR H NV+L++++A +L M+P K Y+ L+++YAA
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAAN 535
Query: 475 KRW 477
W
Sbjct: 536 GAW 538
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 195/391 (49%), Gaps = 4/391 (1%)
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP 116
Y LK C +++ + +HG + +G S++ + + LI +YLK GD+ AR +FD++
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
RD+ SW M+S + + G DA ++F M R + + T ++L +C DL LK G
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
+HG V + G + N V ++++ +Y C + AR F+ + +D VSWN++I GY
Sbjct: 135 IHGSVEK--GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN 192
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
A LF M G PD T S+L A + L + S +H +K G+G ++A+
Sbjct: 193 ACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI 252
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK-GREAISIFNEMLGKNI 355
SL++ Y CGS A + + L S T ++TGF +A IF +M+
Sbjct: 253 RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKT 312
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
DE V +++L C+ V G++I + + + L+D+ ++G++++A
Sbjct: 313 KMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAV 372
Query: 416 ATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
+ MK K WT+L++ H N + A
Sbjct: 373 LAFEEMKEKDVRS-WTSLIAGYGRHGNFEKA 402
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 266/515 (51%), Gaps = 26/515 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFT---- 56
+ A +FD++ ++ WN+MI G++ + + L+ +M + N +
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHC---CLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 57 -YPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
+P + +A LRE G VHG G +D+ V ++ +Y K + AR VFD
Sbjct: 211 MFPALGRAGA---LRE-GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLA------LLSACGDLM 169
++ +W+ M+ GYV+N +A VF M LV D M+ +L C
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFG 322
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSL 229
DL G+ VH Y V+ L + V N++I Y + A + F + +KD +S+NSL
Sbjct: 323 DLSGGRCVHCYAVKAGFIL--DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSL 380
Query: 230 ISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY 289
I+G + LF +M G PD T++ VL ACS ++AL GSS H Y V GY
Sbjct: 381 ITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY 440
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNE 349
+NT++ +L+ MY CG A R F+ + + + SW M+ GFGIHG G+EA+S+FN
Sbjct: 441 AVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNS 500
Query: 350 MLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR-DYNVEPTTTHYSCLVDLLGRA 408
M + PDE A+LSACSHSGLVDEGK++F M+R D+NV P HY+C+ DLL RA
Sbjct: 501 MQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARA 560
Query: 409 GKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLS 468
G LDEAY ++ M +P+ V LLSAC ++N +L ++K+ + S V LS
Sbjct: 561 GYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLS 619
Query: 469 NIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFEL 503
N Y+A +RW P YS+ ++
Sbjct: 620 NTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 228/443 (51%), Gaps = 14/443 (3%)
Query: 4 AQLIFDQIVFK--NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVL 61
A+ +FD+I N W+ MIR YA + + ++L LY +ML+ G + +TYPFVL
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYA---SNDFAEKALDLYYKMLNSGVRPTKYTYPFVL 110
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
KAC L + G +H V +D+YV +L+ Y K G++ A VFD+MP RD+
Sbjct: 111 KACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMV 170
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WN M+SG+ + D +F MRR GL + +T++ + A G L+ GKAVHGY
Sbjct: 171 AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY 230
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
R SN+ V ++D+Y I AR++F+ K+ V+W+++I GY +
Sbjct: 231 CTRMG--FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIK 288
Query: 241 QVLELFGQMFIGG--AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ E+F QM + A+ V + +L C+R L G VH Y VK G+ ++ V +
Sbjct: 289 EAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
+IS YA GS A R F+EI K + S+ ++TG ++ + E+ +F+EM I PD
Sbjct: 349 IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPD 408
Query: 359 EGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
VL+ACSH + G Y + Y V T+ + L+D+ + GKLD A
Sbjct: 409 ITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVN--TSICNALMDMYTKCGKLDVAKRV 466
Query: 418 IDNMKLKPNEDVWTALLSACRLH 440
D M K + W +L +H
Sbjct: 467 FDTMH-KRDIVSWNTMLFGFGIH 488
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 159 LALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGL 218
L+LL C +L LG+ +H ++++ S LS++ + N + +Y +C+ + AR +F+ +
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEI 61
Query: 219 AVK--DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
+ ++W+ +I Y A + L+L+ +M G P + T VL AC+ + A+
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
G +HS++ + + V T+L+ YA CG A + F+E+P + + +W M++GF +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 337 HGKGREAISIFNEMLGKN-ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
H + I +F +M + ++P+ + A +G + EGK + TR
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTR-MGFSNDL 240
Query: 396 THYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
+ ++D+ ++ + A D + K NE W+A++
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFD-LDFKKNEVTWSAMI 278
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 271/526 (51%), Gaps = 32/526 (6%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
++ FLWN++I+ ++ G ++L+L ML G D F+ VLKAC L + G
Sbjct: 84 EDPFLWNAVIKSHS---HGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGG 140
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
+++HG + GL SD+++ N LI +YLK G +G +R +FD+MP RD S+N+M+ GYVK
Sbjct: 141 MQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKC 200
Query: 134 GEAGDAFVVFD--HMRRSGLVG------------DGTTMLALLSACGDLMDL-KLGKAVH 178
G A +FD M L+ DG + + L A DL +
Sbjct: 201 GLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMID 260
Query: 179 GYVVRNSGRLSN----------NEFVT-NSMIDMYCNCDFISGARKLFEGLAVKDTVSWN 227
GYV GR+ + + VT +MID Y F+ A+ LF+ + +D V++N
Sbjct: 261 GYV--KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYN 318
Query: 228 SLISGYEKCGGAFQVLELFGQMFI-GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
S+++GY + + LE+F M +PD+ T++ VL A +++ L +H Y+V+
Sbjct: 319 SMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE 378
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
K + + +G +LI MY+ CGS A F I +KS+ W M+ G IHG G A +
Sbjct: 379 KQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM 438
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
++ ++ PD+ F VL+ACSHSGLV EG F M R + +EP HY C+VD+L
Sbjct: 439 LLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILS 498
Query: 407 RAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVC 466
R+G ++ A I+ M ++PN+ +W L+AC H+ + E+ A+ L S YV
Sbjct: 499 RSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL 558
Query: 467 LSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFA 512
LSN+YA+ W P S+ EL+ VH+FF
Sbjct: 559 LSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 183/421 (43%), Gaps = 69/421 (16%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSR-----------SLVLYREMLS-FGQK 51
++ +FD++ ++S +NSMI GY G S+R +L+ + M+S + Q
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYV-KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT 233
Query: 52 ADNFTYPFVLKACGDLLLREM--------GIRVHGLVV-VDGL-----ESDVYVGNSLIS 97
+D K D+ +++ G HG + GL DV ++I
Sbjct: 234 SDGVD--IASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMID 291
Query: 98 MYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGT 156
Y K G + A+ +FD+MP RD+ ++N+MM+GYV+N +A +F M + S L+ D T
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 157 TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
T++ +L A L L +H Y+V L V ++IDMY C I A +FE
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFE 409
Query: 217 GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
G+ K WN++I G G ++ Q+ PD++T + VL ACS
Sbjct: 410 GIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS------- 462
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH--RAFNEIPDKSLASWTVMVTGF 334
HS LVK+G LC R ++I + L + MV
Sbjct: 463 ----HSGLVKEG--------------------LLCFELMRRKHKIEPR-LQHYGCMVDIL 497
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
G A ++ EM + P++ ++ L+ACSH + G+ + + P+
Sbjct: 498 SRSGSIELAKNLIEEM---PVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 554
Query: 395 T 395
+
Sbjct: 555 S 555
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 13/299 (4%)
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
V D WN ++ + + A ++ M +G+ D ++ +L AC L +K G
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKC 236
+HG++ + L ++ F+ N +I +Y C + +R++F+ + +D+VS+NS+I GY KC
Sbjct: 143 IHGFLKKTG--LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKC 200
Query: 237 GGAFQVLELFGQMFIGGAVPDEV-TVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G ELF M P E+ +IS S + G + S L +
Sbjct: 201 GLIVSARELFDLM------PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS 254
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
S+I Y G A F+ +P + + +W M+ G+ G A ++F++M +++
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
+ + H E EIF M ++ ++ P T ++ + + G+L +A
Sbjct: 315 VAYNSMMAGYVQNKYHM----EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 6/232 (2%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVL 61
A+ +FDQ+ ++ +NSM+ GY +L ++ +M D+ T VL
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGY---VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
A L I +H +V +G +LI MY K G + A LVF+ + + +
Sbjct: 358 PAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 417
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
WN M+ G +G AF + + R L D T + +L+AC +K G +
Sbjct: 418 HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE-L 476
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISG 232
+R ++ M+D+ I A+ L E + V+ + V W + ++
Sbjct: 477 MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
V+D WN++I + Q L L M G D+ ++ VL ACSR+ + G
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF---GI 336
+H +L K G + + LI +Y CG + + F+ +P + S+ M+ G+ G+
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
RE + M KN+ + +++S + + +G +I K+ D E
Sbjct: 203 IVSARELFDLM-PMEMKNLIS----WNSMISGYAQTS---DGVDIASKLFADMP-EKDLI 253
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLHRNVKLAEI-SAQKL 453
++ ++D + G++++A D M P DV W ++ KL + A+ L
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVM---PRRDVVTWATMIDG-----YAKLGFVHHAKTL 305
Query: 454 FEMDPNK 460
F+ P++
Sbjct: 306 FDQMPHR 312
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 266/539 (49%), Gaps = 13/539 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ QA +FD+ ++ WNS+I GY ++ L L +M G + V
Sbjct: 199 LDQAMSLFDRCDERDQVSWNSLISGYVRVG---AAEEPLNLLAKMHRDGLNLTTYALGSV 255
Query: 61 LKACGDLL---LREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
LKAC L E G+ +H G+E D+ V +L+ MY K G + A +F MP
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS 315
Query: 118 RDLTSWNTMMSGYVKNGEAGD-----AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLK 172
+++ ++N M+SG+++ E D AF +F M+R GL +T +L AC L+
Sbjct: 316 KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLE 375
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
G+ +H + +N+ ++EF+ +++I++Y + F + +D SW S+I
Sbjct: 376 YGRQIHALICKNN--FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDC 433
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
+ + +LF Q+F P+E TV ++ AC+ +AL G + Y +K G
Sbjct: 434 HVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAF 493
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
T+V TS ISMYA G+ A++ F E+ + +A+++ M++ HG EA++IF M
Sbjct: 494 TSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT 553
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
I P++ F VL AC H GLV +G + F M DY + P H++CLVDLLGR G+L
Sbjct: 554 HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613
Query: 413 EAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYA 472
+A I + + + W ALLS+CR++++ + + A++L E++P YV L NIY
Sbjct: 614 DAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 673
Query: 473 AEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLN 531
P+ S+ + H F D SH S IY L+ ++
Sbjct: 674 DSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 222/475 (46%), Gaps = 46/475 (9%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +FD++ +N +NS+I GY +++ L+ E K D FTY L
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYT---QMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG+ ++G +HGLVVV+GL V++ N LI MY K G + A +FD+ RD SW
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMD---LKLGKAVHGY 180
N+++SGYV+ G A + + M R GL + ++L AC ++ ++ G A+H Y
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG--- 237
+ + + V +++DMY + A KLF + K+ V++N++ISG+ +
Sbjct: 278 TAKLG--MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 238 --GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
+ + +LF M G P T VL ACS L G +H+ + K + + +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
G++LI +YA GS + F + +ASWT M+ + + A +F ++ +I
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEI---------------------FYKMTRDYNV--- 391
P+E + ++SAC+ + G++I Y + + +
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 392 ------EPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSAC 437
P YS ++ L + G +EA ++MK +KPN+ + +L AC
Sbjct: 516 VFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 12/371 (3%)
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYV 131
+G HG ++ L +Y+ N+L++MY K ++G AR +FD+MP R++ S+N+++SGY
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+ G A +F R + L D T L CG+ DL LG+ +HG VV N LS
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG--LSQQ 182
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
F+ N +IDMY C + A LF+ +D VSWNSLISGY + G A + L L +M
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 252 GGAVPDEVTVISVLGACS---RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
G + SVL AC + G ++H Y K G + V T+L+ MYA GS
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 309 FLCAHRAFNEIPDKSLASWTVMVTGF-----GIHGKGREAISIFNEMLGKNITPDEGVFT 363
A + F+ +P K++ ++ M++GF EA +F +M + + P F+
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
VL ACS + ++ G++I + ++ N + S L++L G ++ +
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKN-NFQSDEFIGSALIELYALMGSTEDGMQCFASTS- 420
Query: 424 KPNEDVWTALL 434
K + WT+++
Sbjct: 421 KQDIASWTSMI 431
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVT 332
+++LG H +++K + +L++MY C A + F+ +P++++ S+ +++
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 333 GFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVE 392
G+ G +A+ +F E N+ D+ + L C +D G E+ + + +
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLS 180
Query: 393 PTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
+ L+D+ + GKLD+A + D + ++ W +L+S
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS 222
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 250/499 (50%), Gaps = 38/499 (7%)
Query: 50 QKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTAR 109
++ +N+ PF+ + R +++ +++ GL ++ ++ K DM A
Sbjct: 7 REVENYFIPFLQRVKS----RNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYAT 62
Query: 110 LVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDL 168
+F+++ ++ +N+++ Y N D ++ + R+S + D T + +C L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 169 MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNS 228
LGK VHG++ + R + N++IDMY D + A K+F+ + +D +SWNS
Sbjct: 123 GSCYLGKQVHGHLCKFGPRF--HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 229 LISGYEKCG------GAF-------------------------QVLELFGQMFIGGAVPD 257
L+SGY + G G F + ++ F +M + G PD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN 317
E+++ISVL +C+++ +L LG +H Y ++G+ T V +LI MY+ CG A + F
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 318 EIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDE 377
++ K + SW+ M++G+ HG AI FNEM + P+ F +LSACSH G+ E
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 378 GKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
G F M +DY +EP HY CL+D+L RAGKL+ A M +KP+ +W +LLS+C
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 438 RLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPS 497
R N+ +A ++ L E++P + YV L+NIYA +W P
Sbjct: 421 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Query: 498 YSFFELNKMVHQFFAGDTS 516
S E+N +V +F +GD S
Sbjct: 481 GSLIEVNNIVQEFVSGDNS 499
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 205/464 (44%), Gaps = 81/464 (17%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREML--SFGQKADNFTYP 58
M A +F+Q+ N FL+NS+IR Y ++ R +Y+++L SF + D FT+P
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIR---IYKQLLRKSF-ELPDRFTFP 113
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
F+ K+C L +G +VHG + G V N+LI MY+KF D+ A VFD+M R
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 119 DLTSWNTMMSGYVKNGEAG-------------------------------DAFVVFDHMR 147
D+ SWN+++SGY + G+ +A F M+
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 148 RSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
+G+ D +++++L +C L L+LGK +H Y R G L V N++I+MY C
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR-GFLKQTG-VCNALIEMYSKCGV 291
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
IS A +LF + KD +SW+++ISGY G A +E F +M P+ +T + +L A
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSA 351
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
CS + M+ + R +I K + +
Sbjct: 352 CSH-----------------------------VGMWQEGLRYFDMMRQDYQIEPK-IEHY 381
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
++ GK A+ I M K PD ++ ++LS+C G +D M
Sbjct: 382 GCLIDVLARAGKLERAVEITKTMPMK---PDSKIWGSLLSSCRTPGNLDVA---LVAMDH 435
Query: 388 DYNVEPTTT-HYSCLVDLLGRAGKLDEA-----YATIDNMKLKP 425
+EP +Y L ++ GK ++ +NMK P
Sbjct: 436 LVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 479
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 250/514 (48%), Gaps = 40/514 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +AQ I + + WN +I Y S+ +Y+ M+S G +AD FTYP V
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYI---RNKRFQESVSVYKRMMSKGIRADEFTYPSV 190
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+KAC LL G VHG + V ++YV N+LISMY +FG + AR +FD+M RD
Sbjct: 191 IKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDA 250
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT----------------------- 157
SWN +++ Y + G+AF + D M SG+ T
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 158 ------------MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M+ L AC + LK GK H V+R+ + + V NS+I MY C
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 206 DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
+ A +F+ + +WNS+ISG+ + + L +M + G P+ +T+ S+L
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 266 GACSRISALLLGSSVHSYLVKK-GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
+R+ L G H Y++++ Y + SL+ MYA G + A R F+ + +
Sbjct: 431 PLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
++T ++ G+G GKG A++ F +M I PD AVLSACSHS LV EG +F K
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
M + + HYSC+VDL RAG LD+A + +P+ + LL AC +H N
Sbjct: 551 MEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTN 610
Query: 445 LAEISAQK-LFEMDPNKVSGYVCLSNIYAAEKRW 477
+ E +A K L E P + Y+ L+++YA W
Sbjct: 611 IGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 204/452 (45%), Gaps = 66/452 (14%)
Query: 42 YREMLSFGQKADNF-----------TYPFVLKACGDLLLREMGI-------RVHGLVVVD 83
+R +S GQ + F ++ FVL + LL +G ++H +
Sbjct: 53 FRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVF 143
GLE D + L++ Y F + A+ + + + WN ++ Y++N ++ V+
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 144 DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYC 203
M G+ D T +++ AC L+D G+ VHG + +S R N +V N++I MY
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC--NLYVCNALISMYK 230
Query: 204 NCDFISGARKLFEGLAVKDTVSWNSLISGY---EKCGGAFQVLELFGQMFIGGAVPDEVT 260
+ AR+LF+ ++ +D VSWN++I+ Y EK G AF++L+ +M++ G VT
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD---RMYLSGVEASIVT 287
Query: 261 -----------------------------------VISVLGACSRISALLLGSSVHSYLV 285
+I+ L ACS I AL G H ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 286 KK---GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGRE 342
+ + ++ V SLI+MY+ C A F ++ SL++W +++GF + + E
Sbjct: 348 RSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
+ EML P+ ++L + G + GKE + R + + ++ LV
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 403 DLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
D+ ++G++ A D+M+ K ++ +T+L+
Sbjct: 467 DMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI 497
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 250/514 (48%), Gaps = 40/514 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +AQ I + + WN +I Y S+ +Y+ M+S G +AD FTYP V
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYI---RNKRFQESVSVYKRMMSKGIRADEFTYPSV 190
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+KAC LL G VHG + V ++YV N+LISMY +FG + AR +FD+M RD
Sbjct: 191 IKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDA 250
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT----------------------- 157
SWN +++ Y + G+AF + D M SG+ T
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 158 ------------MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M+ L AC + LK GK H V+R+ + + V NS+I MY C
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 206 DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
+ A +F+ + +WNS+ISG+ + + L +M + G P+ +T+ S+L
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 266 GACSRISALLLGSSVHSYLVKK-GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
+R+ L G H Y++++ Y + SL+ MYA G + A R F+ + +
Sbjct: 431 PLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
++T ++ G+G GKG A++ F +M I PD AVLSACSHS LV EG +F K
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
M + + HYSC+VDL RAG LD+A + +P+ + LL AC +H N
Sbjct: 551 MEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTN 610
Query: 445 LAEISAQK-LFEMDPNKVSGYVCLSNIYAAEKRW 477
+ E +A K L E P + Y+ L+++YA W
Sbjct: 611 IGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 204/452 (45%), Gaps = 66/452 (14%)
Query: 42 YREMLSFGQKADNF-----------TYPFVLKACGDLLLREMGI-------RVHGLVVVD 83
+R +S GQ + F ++ FVL + LL +G ++H +
Sbjct: 53 FRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVF 143
GLE D + L++ Y F + A+ + + + WN ++ Y++N ++ V+
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 144 DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYC 203
M G+ D T +++ AC L+D G+ VHG + +S R N +V N++I MY
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC--NLYVCNALISMYK 230
Query: 204 NCDFISGARKLFEGLAVKDTVSWNSLISGY---EKCGGAFQVLELFGQMFIGGAVPDEVT 260
+ AR+LF+ ++ +D VSWN++I+ Y EK G AF++L+ +M++ G VT
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD---RMYLSGVEASIVT 287
Query: 261 -----------------------------------VISVLGACSRISALLLGSSVHSYLV 285
+I+ L ACS I AL G H ++
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 286 KK---GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGRE 342
+ + ++ V SLI+MY+ C A F ++ SL++W +++GF + + E
Sbjct: 348 RSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
+ EML P+ ++L + G + GKE + R + + ++ LV
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 403 DLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
D+ ++G++ A D+M+ K ++ +T+L+
Sbjct: 467 DMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI 497
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 262/539 (48%), Gaps = 49/539 (9%)
Query: 10 QIVFKNSFLWNSMIRGY-ACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLL 68
Q+ N F++N++ +G+ CS RSL LY ML ++TY ++KA
Sbjct: 830 QMQEPNVFVYNALFKGFVTCS----HPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--F 883
Query: 69 LREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMS 128
G + + G V + +LI Y G + AR VFD+MP RD +W TM+S
Sbjct: 884 ASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVS 943
Query: 129 GYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRL 188
Y R L D LA + M K
Sbjct: 944 AY-----------------RRVLDMDSANSLA------NQMSEK---------------- 964
Query: 189 SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQ 248
NE +N +I+ Y + A LF + VKD +SW ++I GY + + + +F +
Sbjct: 965 --NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 249 MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
M G +PDEVT+ +V+ AC+ + L +G VH Y ++ G+ ++ +G++L+ MY+ CGS
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 309 FLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
A F +P K+L W ++ G HG +EA+ +F +M +++ P+ F +V +A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNED 428
C+H+GLVDEG+ I+ M DY++ HY +V L +AG + EA I NM+ +PN
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV 1202
Query: 429 VWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXX-XXX 487
+W ALL CR+H+N+ +AEI+ KL ++P Y L ++YA + RW
Sbjct: 1203 IWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMR 1262
Query: 488 XXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSV 546
P S ++K H F A D SH SD++ L ++ +Q+ GY+ +T +V
Sbjct: 1263 ELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 39/304 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ QA+ +F+Q+ K+ W +MI+GY+ ++ ++ +M+ G D T V
Sbjct: 982 LEQAESLFNQMPVKDIISWTTMIKGYS---QNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ AC L + E+G VH + +G DVY+G++L+ MY K G + A LVF +P ++L
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
WN+++ G +G A +A +F M + + T +++ +AC H
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC-----------THAG 1147
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+V R + SMID Y V + + ++ + K G +
Sbjct: 1148 LVDEGRR------IYRSMIDDYS---------------IVSNVEHYGGMVHLFSKAGLIY 1186
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ LEL G M P+ V ++L C RI L+ + + + MN+ L+
Sbjct: 1187 EALELIGNMEFE---PNAVIWGALLDGC-RIHKNLVIAEIAFNKLMVLEPMNSGYYFLLV 1242
Query: 301 SMYA 304
SMYA
Sbjct: 1243 SMYA 1246
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 283/572 (49%), Gaps = 41/572 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPF 59
+ +A +F ++ K+ WN +I GYA + ++ L+ ++ G D+ T
Sbjct: 279 IEEAASLFTRMGSKDLVSWNVVIAGYASNC---EWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 60 VLKACGDLLLREMGIRVHGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
+L C L G +H ++ L D VGN+LIS Y +FGD A F M +
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK 395
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D+ SWN ++ + + + + H+ + D T+L+LL C ++ + K VH
Sbjct: 396 DIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVH 455
Query: 179 GYVVRNSGRLSNNE--FVTNSMIDMYCNCDFISGARKLFEGLAVKDT-VSWNSLISGYEK 235
GY V+ +G L + E + N+++D Y C + A K+F GL+ + T VS+NSL+SGY
Sbjct: 456 GYSVK-AGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVN 514
Query: 236 CGGAFQVLELFGQM-----------------------FIG--------GAVPDEVTVISV 264
G LF +M IG G P+ VT++++
Sbjct: 515 SGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNL 574
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L C+++++L L H Y+++ G G GT L+ +YA CGS A+ F + L
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDL 633
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
+T MV G+ +HG+G+EA+ I++ M NI PD T +L+AC H+GL+ +G +I+
Sbjct: 634 VMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDS 693
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
+ + ++PT Y+C VDL+ R G+LD+AY+ + M ++PN ++W LL AC + +
Sbjct: 694 IRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMD 753
Query: 445 LAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELN 504
L A L + + + +V +SN+YAA+ +W P S+ E++
Sbjct: 754 LGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVD 813
Query: 505 KMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
+ F +GD SH + D I+ + L Q+K+
Sbjct: 814 GQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 236/488 (48%), Gaps = 31/488 (6%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ--KADNFTYP 58
M Q +F Q+ + +WN ++ G + S G R + + + + F K + T+
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-----RETMRFFKAMHFADEPKPSSVTFA 126
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDM-GTARLVFDKMPV 117
VL C L G +H ++ GLE D VGN+L+SMY KFG + A FD +
Sbjct: 127 IVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD 186
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL---MDLKLG 174
+D+ SWN +++G+ +N DAF F M + + T+ +L C + + + G
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYE 234
+ +H YVV+ S L + FV NS++ Y I A LF + KD VSWN +I+GY
Sbjct: 247 RQIHSYVVQRSW-LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 235 KCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM-N 292
F+ +LF + G V PD VT+IS+L C++++ L G +HSY+++ Y + +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
T+VG +LIS YA G A+ AF+ + K + SW ++ F K + +++ + +L
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY-------SCLVDLL 405
+ IT D ++L C + + + KE+ Y+V+ H + L+D
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEV-----HGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 406 GRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLF-EMDPNKVSGY 464
+ G ++ A+ + + + +LLS + N + AQ LF EM ++ +
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSG---YVNSG-SHDDAQMLFTEMSTTDLTTW 536
Query: 465 VCLSNIYA 472
+ IYA
Sbjct: 537 SLMVRIYA 544
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 185/406 (45%), Gaps = 21/406 (5%)
Query: 42 YREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLK 101
+R + FG D+ + V+KAC + G +HG V G + V S+++MY K
Sbjct: 11 FRLLSGFG--TDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAK 68
Query: 102 FGDMGTARLVFDKMPVRDLTSWNTMMSGY-VKNGEAGDAFVVFDHMRRSGLVGDGTTMLA 160
M + +F +M D WN +++G V G F F M + + A
Sbjct: 69 CRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRF--FKAMHFADEPKPSSVTFA 126
Query: 161 L-LSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI-SGARKLFEGL 218
+ L C L D GK++H Y+++ L + V N+++ MY FI A F+G+
Sbjct: 127 IVLPLCVRLGDSYNGKSMHSYIIK--AGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 219 AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS---ALL 275
A KD VSWN++I+G+ + F M P+ T+ +VL C+ + A
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACR 244
Query: 276 LGSSVHSYLVKKGY-GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF 334
G +HSY+V++ + + V SL+S Y G A F + K L SW V++ G+
Sbjct: 245 SGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 335 GIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVE 392
+ + +A +F+ ++ K +++PD ++L C+ + GKEI Y + Y +E
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 393 PTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSA 436
T+ + L+ R G AY M K D+ W A+L A
Sbjct: 365 DTSVG-NALISFYARFGDTSAAYWAFSLMSTK---DIISWNAILDA 406
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 243 LELFGQMF--IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
L F Q F + G D + V+ AC+ +S L G ++H + K G+ + V S++
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM-LGKNITPDE 359
+MYA C + F ++ W +++TG + GRE + F M P
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSS 122
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL-DEAYATI 418
F VL C G GK + + + +E T + LV + + G + +AY
Sbjct: 123 VTFAIVLPLCVRLGDSYNGKSMHSYIIKA-GLEKDTLVGNALVSMYAKFGFIFPDAYTAF 181
Query: 419 DNMKLKPNEDV--WTALLS 435
D + ++DV W A+++
Sbjct: 182 DGIA---DKDVVSWNAIIA 197
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 246/475 (51%), Gaps = 12/475 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+++F ++ K++ WN+MI Y+ S ++ +++ M + T +L A
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSG---LQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
+H LVV G+ +D+ V SL+ Y + G + +A ++ +
Sbjct: 262 ------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL 315
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
+++S Y + G+ A V F R+ + D ++ +L C + +G ++HGY ++
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIK 375
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ L V N +I MY D + LFE L +SWNS+ISG + G A
Sbjct: 376 SG--LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAF 433
Query: 244 ELFGQMFI-GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
E+F QM + GG +PD +T+ S+L CS++ L LG +H Y ++ + V T+LI M
Sbjct: 434 EVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDM 493
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
YA CG+ + A F I A+W M++G+ + G A+S + EM K + PDE F
Sbjct: 494 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
VLSAC+H G VDEGK F M +++ + PT HY+ +V LLGRA EA I M
Sbjct: 554 LGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD 613
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+KP+ VW ALLSAC +HR +++ E A+K+F +D YV +SN+YA E W
Sbjct: 614 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMW 668
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 14/351 (3%)
Query: 32 GNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC----GDLLLREMGIRVHGLVVVDGLES 87
G SS + ++R++L ++FT L+A L+ ++ H + GL+
Sbjct: 26 GEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH--LTKSGLDR 83
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
VYV SL+++YLK G + +A+++FD+MP RD WN ++ GY +NG DA+ +F M
Sbjct: 84 FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVML 143
Query: 148 RSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
+ G TT++ LL CG + G++VHG ++ L + V N++I Y C
Sbjct: 144 QQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ--VKNALISFYSKCAE 201
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
+ A LF + K TVSWN++I Y + G + + +F MF VT+I++L
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL-- 259
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
SA + +H +VK G + +V TSL+ Y+ CG + A R + S+
Sbjct: 260 ----SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL 315
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
T +V+ + G A+ F++ + D +L C S +D G
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 199/433 (45%), Gaps = 14/433 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
AQ++FD++ +++ +WN++I GY + + L+ ML G T +L
Sbjct: 104 AQMLFDEMPERDTVVWNALICGY---SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPF 160
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG G VHG+ GLE D V N+LIS Y K ++G+A ++F +M + SW
Sbjct: 161 CGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSW 220
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
NTM+ Y ++G +A VF +M + T++ LLSA + +H VV+
Sbjct: 221 NTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLVVK 274
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ N+ V S++ Y C + A +L+ V S++S Y + G +
Sbjct: 275 CG--MVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAV 332
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
F + D V ++ +L C + S + +G S+H Y +K G T V LI+MY
Sbjct: 333 VYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMY 392
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNE-MLGKNITPDEGVF 362
+ F ++ + L SW +++G G+ A +F++ ML + PD
Sbjct: 393 SKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITI 452
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
++L+ CS ++ GKE+ R+ N E + L+D+ + G +A + ++K
Sbjct: 453 ASLLAGCSQLCCLNLGKELHGYTLRN-NFENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Query: 423 LKPNEDVWTALLS 435
P W +++S
Sbjct: 512 -APCTATWNSMIS 523
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 5/260 (1%)
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMD-LKLG-K 175
RDL+ +++++ + + +F + RS L + TM L A + KL +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
V ++ ++ L +V S++++Y ++ A+ LF+ + +DTV WN+LI GY +
Sbjct: 71 QVQTHLTKSG--LDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G +LF M G P T++++L C + + G SVH K G +++ V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 296 GTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
+LIS Y+ C A F E+ DKS SW M+ + G EAI++F M KN+
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 356 TPDEGVFTAVLSA-CSHSGL 374
+LSA SH L
Sbjct: 249 EISPVTIINLLSAHVSHEPL 268
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 249/480 (51%), Gaps = 9/480 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +A +F ++ N WN +I G+ S R+L M G D F P
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFV----DKGSPRALEFLVRMQREGLVLDGFALPCG 244
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF--DKMPVR 118
LKAC L MG ++H VV GLES + ++LI MY G + A VF +K+ V
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 119 D-LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
+ WN+M+SG++ N E A + + +S L D T+ L C + ++L+LG V
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
H VV + L + V + ++D++ N I A KLF L KD ++++ LI G K G
Sbjct: 365 HSLVVVSGYEL--DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
LF ++ G D+ V ++L CS +++L G +H +KKGY T
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+L+ MY CG F+ + ++ + SWT ++ GFG +G+ EA F++M+ I P
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
++ F +LSAC HSGL++E + M +Y +EP HY C+VDLLG+AG EA
Sbjct: 543 NKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANEL 602
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
I+ M L+P++ +WT+LL+AC H+N L + A+KL + P+ S Y LSN YA W
Sbjct: 603 INKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMW 662
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 240/500 (48%), Gaps = 47/500 (9%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPF 59
+ A +FD++ +N W +M+ GY N +++ LYR ML ++A N F Y
Sbjct: 56 LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPN---KAIELYRRMLDSEEEAANEFMYSA 112
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGD--------------- 104
VLKACG + ++GI V+ + + L DV + NS++ MY+K G
Sbjct: 113 VLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPS 172
Query: 105 ----------------MGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
M A +F +MP ++ SWN ++SG+V G A M+R
Sbjct: 173 STSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQR 231
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
GLV DG + L AC L +GK +H VV++ L ++ F +++IDMY NC +
Sbjct: 232 EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG--LESSPFAISALIDMYSNCGSL 289
Query: 209 SGARKLF--EGLAVKDTVS-WNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
A +F E LAV +V+ WNS++SG+ L L Q++ D T+ L
Sbjct: 290 IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGAL 349
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA 325
C L LG VHS +V GY ++ VG+ L+ ++AN G+ AH+ F+ +P+K +
Sbjct: 350 KICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDII 409
Query: 326 SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF-YK 384
+++ ++ G G A +F E++ + D+ + + +L CS + GK+I
Sbjct: 410 AFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLC 469
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
+ + Y EP T + LVD+ + G++D D M L+ + WT ++ + V+
Sbjct: 470 IKKGYESEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVE 526
Query: 445 LAEISAQKLFE--MDPNKVS 462
A K+ ++PNKV+
Sbjct: 527 EAFRYFHKMINIGIEPNKVT 546
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 194/423 (45%), Gaps = 62/423 (14%)
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L+ CG + + G + V+ G+ +V++ N++ISMY+ F + A VFD+M R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML-ALLSACGDLMDLKLGKAVH- 178
+W TM+SGY +G+ A ++ M S M A+L ACG + D++LG V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 179 ---------GYVVRNS--------GRL--SNNEFVT---------NSMIDMYCNCDFISG 210
V+ NS GRL +N+ F N++I YC +
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
A LF + + VSWN LISG+ G+ + LE +M G V D + L ACS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVD-KGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE---IPDKSLASW 327
L +G +H +VK G + ++LI MY+NCGS + A F++ + S+A W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC-----------SHSGLVD 376
M++GF I+ + A+ + ++ ++ D + L C HS +V
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 377 EGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALL 434
G E+ DY V S LVDL G + +A+ + PN+D+ ++ L+
Sbjct: 371 SGYEL------DYIVG------SILVDLHANVGNIQDAHKLFHRL---PNKDIIAFSGLI 415
Query: 435 SAC 437
C
Sbjct: 416 RGC 418
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 36/318 (11%)
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
+V D + A L CG + K G+++ +V++ +S N F+ N++I MY + +S
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQG--ISQNVFIANNVISMYVDFRLLSD 58
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA-VPDEVTVISVLGACS 269
A K+F+ ++ ++ V+W +++SGY G + +EL+ +M +E +VL AC
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
+ + LG V+ + K+ + + S++ MY G + A+ +F EI S SW
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITP---------DEGVFTAV--------------- 365
+++G+ G EA+++F+ M N+ D+G A+
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDG 238
Query: 366 ------LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
L ACS GL+ GK++ + + +E + S L+D+ G L A
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 420 NMKLKPNED--VWTALLS 435
KL N VW ++LS
Sbjct: 298 QEKLAVNSSVAVWNSMLS 315
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 257/476 (53%), Gaps = 8/476 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A L F ++ ++ F W S+I A S S ++ EM + G D ++
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSG---DMEESFDMFWEMQNKGMHPDGVVISCLIN 339
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR-DLT 121
G ++L G HG V+ D V NSL+SMY KF + A +F ++ +
Sbjct: 340 ELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE 399
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+WNTM+ GY K +F ++ G+ D + +++S+C + + LGK++H YV
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
V+ S L+ + V NS+ID+Y ++ A ++F A + ++WN++I+ Y C + +
Sbjct: 460 VKTSLDLTIS--VVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEK 516
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+ LF +M P +T++++L AC +L G +H Y+ + + MN ++ +LI
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MYA CG + F+ K W VM++G+G+HG AI++F++M ++ P
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
F A+LSAC+H+GLV++GK++F KM Y+V+P HYSCLVDLL R+G L+EA +T+ +M
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Query: 422 KLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
P+ +W LLS+C H ++ A++ DP Y+ L+N+Y+A +W
Sbjct: 696 PFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKW 751
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 219/435 (50%), Gaps = 13/435 (2%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F + ++ FLWNS+I+ + +RSL + ML GQ D+FT P V+ AC +
Sbjct: 81 VFHLVTRRDIFLWNSIIKAHF---SNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE 137
Query: 67 LLLREMGIRVHGLVVVD-GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
LL +G VHGLV+ G + + VG S + Y K G + A LVFD+MP RD+ +W
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTA 197
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLAL---LSACGDLMDLKLGKAVHGYVV 182
++SG+V+NGE+ M +G D L AC +L LK G+ +HG+ V
Sbjct: 198 IISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAV 257
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+N L++++FV +SM Y S A F L +D SW S+I+ + G +
Sbjct: 258 KNG--LASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEES 315
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
++F +M G PD V + ++ ++ + G + H ++++ + +++ V SL+SM
Sbjct: 316 FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSM 375
Query: 303 YANCGSFLCAHRAFNEIPDK-SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
Y A + F I ++ + +W M+ G+G + I +F ++ I D
Sbjct: 376 YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSAS 435
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
T+V+S+CSH G V GK + + + +++ T + + L+DL G+ G L A+
Sbjct: 436 ATSVISSCSHIGAVLLGKSLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMF--C 492
Query: 422 KLKPNEDVWTALLSA 436
+ N W A++++
Sbjct: 493 EADTNVITWNAMIAS 507
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 227/447 (50%), Gaps = 6/447 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A L+FD++ ++ W ++I G+ + L S K + T
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+AC +L + G +HG V +GL S +V +S+ S Y K G+ A L F ++ D+
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW ++++ ++G+ ++F +F M+ G+ DG + L++ G +M + GKA HG+
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGA 239
V+R+ L + V NS++ MYC + +S A KLF ++ + + +WN+++ GY K
Sbjct: 357 VIRHCFSLDST--VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+ +ELF ++ G D + SV+ +CS I A+LLG S+H Y+VK + +V SL
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I +Y G A R F E D ++ +W M+ + + +AI++F+ M+ +N P
Sbjct: 475 IDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+L AC ++G ++ G+ I +T + E + + L+D+ + G L+++ D
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLA 446
K + W ++S +H +V+ A
Sbjct: 593 AGNQK-DAVCWNVMISGYGMHGDVESA 618
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 16/370 (4%)
Query: 74 IRVH-GLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
+R H L++ GL +++V + LIS Y +G + VF + RD+ WN+++ +
Sbjct: 43 LRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFS 102
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
NG+ + F M SG D T ++SAC +L+ +G VHG V+++ G N
Sbjct: 103 NGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG-FDRNT 161
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
V S + Y C F+ A +F+ + +D V+W ++ISG+ + G + L +M
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSA 221
Query: 253 GA---VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSF 309
G+ P+ T+ ACS + AL G +H + VK G + V +S+ S Y+ G+
Sbjct: 222 GSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNP 281
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
A+ +F E+ D+ + SWT ++ G E+ +F EM K + PD V + +++
Sbjct: 282 SEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINEL 341
Query: 370 SHSGLVDEGKE-----IFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
LV +GK I + + D V + C +LL A KL + I +
Sbjct: 342 GKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL---FCRISE---E 395
Query: 425 PNEDVWTALL 434
N++ W +L
Sbjct: 396 GNKEAWNTML 405
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 238/451 (52%), Gaps = 34/451 (7%)
Query: 27 ACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLE 86
AC+ G SL +REM G K D F P +LKA +LL RE G +H LV+ E
Sbjct: 91 ACARNG-YYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 87 SDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM 146
SD ++ +SLI MY KFG++G AR VF + +DL +N M+SGY N +A +A + M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 147 RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD 206
+ G+ D T AL+S + RN ++S ++++ C
Sbjct: 210 KLLGIKPDVITWNALISGFSHM--------------RNEEKVSE-------ILELMC--- 245
Query: 207 FISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLG 266
+ G + D VSW S+ISG + + F QM G P+ T+I++L
Sbjct: 246 -LDGYKP--------DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 267 ACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
AC+ ++ + G +H Y V G + V ++L+ MY CG A F + P K+ +
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
+ M+ + HG +A+ +F++M D FTA+L+ACSH+GL D G+ +F M
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
Y + P HY+C+VDLLGRAGKL EAY I M+++P+ VW ALL+ACR H N++LA
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 447 EISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
I+A+ L E++P + L+++YA W
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 174 GKAVHGYVVRNS-GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISG 232
G+ +H ++V + RL+ + ++ Y C + ARK+F+ + +D +I
Sbjct: 35 GRVLHAHLVTSGIARLTR---IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
+ G + L+ F +M+ G D V S+L A + G +H ++K Y +
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
+ +SLI MY+ G A + F+++ ++ L + M++G+ + + EA+++ +M
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
I PD + A++S SH ++ EI M D +P ++ ++ L + +
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNE 270
Query: 413 EAYATIDNM---KLKPNEDVWTALLSAC 437
+A+ M L PN LL AC
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPAC 298
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 246/468 (52%), Gaps = 45/468 (9%)
Query: 49 GQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA 108
G ++ T VL CGD+ E G+++H L + G E +VYVG SL+SMY + G+ A
Sbjct: 127 GSGMNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLA 183
Query: 109 RLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR-SGLVGDGTTMLALLSACGD 167
+F+K+P + + ++N +SG ++NG VF+ MR+ S + T + ++AC
Sbjct: 184 ARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACAS 243
Query: 168 LMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC---------------------- 205
L++L+ G+ +HG V++ + V ++IDMY C
Sbjct: 244 LLNLQYGRQLHGLVMKKEFQFET--MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW 301
Query: 206 -DFISG---------ARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
ISG A +LFE L + D+ +WNSLISG+ + G + + F +M
Sbjct: 302 NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
VP + S+L ACS I L G +H +++K + V TSLI MY CG
Sbjct: 362 VVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSW 421
Query: 312 AHRAFN--EIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
A R F+ E K W VM++G+G HG+ AI IF + + + P FTAVLSAC
Sbjct: 422 ARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSAC 481
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
SH G V++G +IF M +Y +P+T H C++DLLGR+G+L EA ID M +
Sbjct: 482 SHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY 541
Query: 430 WTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
++LL +CR H + L E +A KL E++P + +V LS+IYAA +RW
Sbjct: 542 -SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERW 588
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 176/340 (51%), Gaps = 7/340 (2%)
Query: 48 FGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGT 107
+ FT+P +LK+C L G +H VV G DV+ +L+SMY+K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 108 ARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGD 167
A V D+MP R + S N +SG ++NG DAF +F R SG + T+ ++L CG
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG- 143
Query: 168 LMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWN 227
D++ G +H +++ + +V S++ MY C A ++FE + K V++N
Sbjct: 144 --DIEGGMQLHCLAMKSGFEM--EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 228 SLISGYEKCGGAFQVLELFGQMF-IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
+ ISG + G V +F M P++VT ++ + AC+ + L G +H ++K
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD-KSLASWTVMVTGFGIHGKGREAIS 345
K + T VGT+LI MY+ C + A+ F E+ D ++L SW +++G I+G+ A+
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 346 IFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
+F ++ + + PD + +++S S G V E + F +M
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 43/355 (12%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +F+++ K+ +N+ I G + N L R+ S ++ ++ T+ + A
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS--EEPNDVTFVNAITA 240
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP-VRDLTS 122
C LL + G ++HGLV+ + + VG +LI MY K +A +VF ++ R+L S
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLIS 300
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT------------------------- 157
WN+++SG + NG+ A +F+ + GL D T
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 158 ----------MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
+ +LLSAC D+ LK GK +HG+V++ + + FV S+IDMY C
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE--RDIFVLTSLIDMYMKCGL 418
Query: 208 ISGARKLFEGL--AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
S AR++F+ KD V WN +ISGY K G +E+F + P T +VL
Sbjct: 419 SSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVL 478
Query: 266 GACSRISALLLGSSVHSYLVKK-GYGMNTAVGTSLISMYANCGSFLCAHRAFNEI 319
ACS + GS + + ++ GY +T +I + G A +++
Sbjct: 479 SACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/479 (32%), Positives = 241/479 (50%), Gaps = 42/479 (8%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+LIF ++ N WN MI G+ S +S+ M G + + T V
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEY---RSDKSVEFLTRMRDSGFQPNEVTCISV 356
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC + GD+ T R +F +P +
Sbjct: 357 LGAC-----------------------------------FRSGDVETGRRIFSSIPQPSV 381
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
++WN M+SGY +A F M+ L D TT+ +LS+C L L+ GK +HG
Sbjct: 382 SAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGV 441
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGA 239
V+R +S N + + +I +Y C+ + + +F+ + D WNS+ISG+
Sbjct: 442 VIRT--EISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLD 499
Query: 240 FQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ L LF +M + P+E + +VL +CSR+ +LL G H +VK GY ++ V T+
Sbjct: 500 TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA 559
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
L MY CG A + F+ + K+ W M+ G+G +G+G EA+ ++ +M+ PD
Sbjct: 560 LTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPD 619
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
F +VL+ACSHSGLV+ G EI M R + +EP HY C+VD LGRAG+L++A
Sbjct: 620 GITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLA 679
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ K + +W LLS+CR+H +V LA A+KL +DP + YV LSN Y++ ++W
Sbjct: 680 EATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQW 738
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 199/420 (47%), Gaps = 42/420 (10%)
Query: 40 VLYREMLSFGQKADNFTYPFVLK---ACGD-----LLLREMGIRVHGLVVVDGLESDVYV 91
V++ ++ G K+D + +L CGD + EM +R DVY
Sbjct: 27 VIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR------------DVYS 74
Query: 92 GNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL 151
N+ ++ K GD+G A VFD MP RD+ SWN M+S V+ G A VV+ M G
Sbjct: 75 WNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF 134
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS-- 209
+ T+ ++LSAC ++D G HG V+ L N FV N+++ MY C FI
Sbjct: 135 LPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG--LDKNIFVGNALLSMYAKCGFIVDY 192
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLG--- 266
G R +FE L+ + VS+ ++I G + + +++F M G D V + ++L
Sbjct: 193 GVR-VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 267 ---ACSRISALL---LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP 320
C +S + LG +H ++ G+G + + SL+ +YA A F E+P
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP 311
Query: 321 DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKE 380
+ ++ SW +M+ GFG + +++ M P+E +VL AC SG V+ G+
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR 371
Query: 381 IFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSAC 437
IF + +P+ + ++ ++ +EA + M+ LKP++ + +LS+C
Sbjct: 372 IFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 65/455 (14%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMI-----RGYACSAGGNSSSRSLVLYREMLSFGQKADNF 55
+ +A +FD + ++ WN+MI +G+ ++LV+Y+ M+ G F
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGF--------EEKALVVYKRMVCDGFLPSRF 139
Query: 56 TYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFG---DMGTARLVF 112
T VL AC +L G+R HG+ V GL+ +++VGN+L+SMY K G D G VF
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR--VF 197
Query: 113 DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLS------ACG 166
+ + + S+ ++ G + + +A +F M G+ D + +LS C
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 167 DLMDL---KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDT 223
L ++ +LGK +H +R + + NS++++Y ++GA +F + +
Sbjct: 258 SLSEIYGNELGKQIHCLALRLG--FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 224 VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSY 283
VSWN +I G+ + + + +E +M G P+EVT ISVLGAC R
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFR------------- 362
Query: 284 LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREA 343
G R F+ IP S+++W M++G+ + EA
Sbjct: 363 ----------------------SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 344 ISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVD 403
IS F +M +N+ PD+ + +LS+C+ ++ GK+I + R + + S L+
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT-EISKNSHIVSGLIA 459
Query: 404 LLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACR 438
+ K++ + D+ + + W +++S R
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFR 494
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 192/439 (43%), Gaps = 53/439 (12%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK---- 62
+F+ + N + ++I G A N ++ ++R M G + D+ +L
Sbjct: 196 VFESLSQPNEVSYTAVIGGLA---RENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAP 252
Query: 63 -----ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV 117
+ ++ E+G ++H L + G D+++ NSL+ +Y K DM A L+F +MP
Sbjct: 253 REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE 312
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
++ SWN M+ G+ + + + MR SG + T +++L AC D++ G
Sbjct: 313 VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG--- 369
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
R++F + +WN+++SGY
Sbjct: 370 ----------------------------------RRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
+ + F QM PD+ T+ +L +C+R+ L G +H +++ N+ + +
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 298 SLISMYANCGSFLCAHRAFNE-IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI- 355
LI++Y+ C + F++ I + +A W M++GF + +A+ +F M +
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
P+E F VLS+CS + G++ + + V + + L D+ + G++D A
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE-TALTDMYCKCGEIDSAR 574
Query: 416 ATIDNMKLKPNEDVWTALL 434
D + L+ N +W ++
Sbjct: 575 QFFDAV-LRKNTVIWNEMI 592
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 207/396 (52%), Gaps = 6/396 (1%)
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHG--YVVRNSGRLSNNEFVTNSMIDMYCNCD 206
SGL + T LL C + GK +H +VV + NE++ ++ +Y
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVG----FALNEYLKVKLLILYALSG 157
Query: 207 FISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLG 266
+ A LF L ++D + WN++ISGY + G + L ++ M VPD+ T SV
Sbjct: 158 DLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 267 ACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
ACS + L G H+ ++K+ N V ++L+ MY C SF HR F+++ +++ +
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
WT +++G+G HGK E + F +M + P+ F VL+AC+H GLVD+G E FY M
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMK 337
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
RDY +EP HY+ +VD LGRAG+L EAY + K + VW +LL ACR+H NVKL
Sbjct: 338 RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLL 397
Query: 447 EISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKM 506
E++A K E+DP YV +N YA+ P YS EL
Sbjct: 398 ELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGE 457
Query: 507 VHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
VH+F DTSH+ S+ IY K+ ++ + Y PD
Sbjct: 458 VHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 6/297 (2%)
Query: 45 MLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGD 104
+ S G + + TY +L+ C G R+H + V G + Y+ L+ +Y GD
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGD 158
Query: 105 MGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
+ TA ++F + +RDL WN M+SGYV+ G + ++ MR++ +V D T ++ A
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 165 CGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTV 224
C L L+ GK H +++ + +N V ++++DMY C S ++F+ L+ ++ +
Sbjct: 219 CSALDRLEHGKRAHAVMIKRC--IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 225 SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYL 284
+W SLISGY G +VL+ F +M G P+ VT + VL AC+ L+ H Y
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNH-GGLVDKGWEHFYS 335
Query: 285 VKKGYGMNTAVG--TSLISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGFGIHG 338
+K+ YG+ +++ G A+ + P K W ++ IHG
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A ++F + ++ WN+MI GY L +Y +M D +T+ V
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKG---LEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+AC L E G R H +++ ++S++ V ++L+ MY K VFD++ R++
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC--GDLMD 170
+W +++SGY +G+ + F+ M+ G + T L +L+AC G L+D
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
E G ++ G + T +L C + G +H+ + G+ +N + L+ +Y
Sbjct: 94 EAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILY 153
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A G A F + + L W M++G+ G +E + I+ +M I PD+ F
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
+V ACS ++ GK M + ++ S LVD+ + + + D +
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFE--MDPNKVSGYVCLS 468
+ N WT+L+S H V +K+ E PN V+ V L+
Sbjct: 273 R-NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 243/435 (55%), Gaps = 15/435 (3%)
Query: 49 GQKADNFTYPFV----LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGD 104
QK + T P + L+ C L + G+RVH L+ L +++ + + L+ +Y G
Sbjct: 83 AQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGY 142
Query: 105 MGTARLVFDKMPVRDLT--SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL 162
A VFD+M RD + +WN+++SGY + G+ DA ++ M G+ D T +L
Sbjct: 143 AEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVL 202
Query: 163 SACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD 222
ACG + +++G+A+H +V+ + +V N+++ MY C I AR +F+ + KD
Sbjct: 203 KACGGIGSVQIGEAIHRDLVKEG--FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
VSWNS+++GY G + L++F M G PD+V + SVL +R+ + G +H
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHG 317
Query: 283 YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGRE 342
+++++G +V +LI +Y+ G A F+++ ++ SW +++ H K
Sbjct: 318 WVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSN 374
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
+ F +M N PD F +VLS C+++G+V++G+ +F M+++Y ++P HY+C+V
Sbjct: 375 GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMV 434
Query: 403 DLLGRAGKLDEAYATI-DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKV 461
+L GRAG ++EAY+ I M L+ VW ALL AC LH N + E++AQ+LFE++P+
Sbjct: 435 NLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNE 494
Query: 462 SGYVCLSNIYAAEKR 476
+ L IY+ KR
Sbjct: 495 HNFELLIRIYSKAKR 509
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 203/413 (49%), Gaps = 49/413 (11%)
Query: 4 AQLIFDQIVFKNS--FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVL 61
A +FD++ ++S F WNS+I GYA ++ LY +M G K D FT+P VL
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELG---QYEDAMALYFQMAEDGVKPDRFTFPRVL 202
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
KACG + ++G +H +V +G DVYV N+L+ MY K GD+ AR VFD +P +D
Sbjct: 203 KACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYV 262
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SWN+M++GY+ +G +A +F M ++G+ D +A+ S ++ K G+ +HG+V
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWV 319
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+R + V N++I +Y + A +F+ + +DTVSWN++IS + K
Sbjct: 320 IRRGMEWELS--VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG-- 375
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L+ F QM A PD +T +SVL C+ + G + S L+ K YG+
Sbjct: 376 -LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFS-LMSKEYGI---------- 423
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
D + + MV +G G EA S+ + +G P V
Sbjct: 424 -------------------DPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT--V 462
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH-YSCLVDLLGRAGKLDE 413
+ A+L AC G D G+ R + +EP H + L+ + +A + ++
Sbjct: 463 WGALLYACYLHGNTDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +FD I K+ WNSM+ GY +L ++R M+ G + D VL
Sbjct: 248 KARNVFDMIPHKDYVSWNSMLTGYLHHG---LLHEALDIFRLMVQNGIEPDKVAISSVL- 303
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
+L + G ++HG V+ G+E ++ V N+LI +Y K G +G A +FD+M RD S
Sbjct: 304 --ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGD 167
WN ++S + KN + F+ M R+ DG T +++LS C +
Sbjct: 362 WNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCAN 403
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 255/477 (53%), Gaps = 39/477 (8%)
Query: 34 SSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLRE-MGIRVHGLVVVDGLESDVYVG 92
S ++LVLY + G + P +L+AC ++ R +G +H + G+ SDV VG
Sbjct: 26 SPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVG 84
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
+SLISMY K G + +AR VFD+MP R++ +WN M+ GY+ NG+A A +F+ + +
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVC 141
Query: 153 GDGTTMLALLSACGDLMDLK----------------------LGKAVHGYVVRNSGRL-- 188
+ T + ++ G ++++ LG V+ + ++ +
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 189 ---SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
N FV + M+ Y + AR +F + +D V WN+LI+GY + G + ++
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F M G PD VTV S+L AC++ L +G VHS + +G +N V +LI MYA
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
CG A F I +S+A M++ IHGKG+EA+ +F+ M ++ PDE F AV
Sbjct: 322 CGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP 425
L+AC H G + EG +IF +M + +V+P H+ CL+ LLGR+GKL EAY + M +KP
Sbjct: 382 LTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKP 440
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGY-----VCLSNIYAAEKRW 477
N+ V ALL AC++H + ++AE K+ E + + Y +SN+YA +RW
Sbjct: 441 NDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSENHLASISNLYAHTERW 496
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 183/390 (46%), Gaps = 61/390 (15%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGY-----ACSAGG----NSSSRSLVLYREMLS-FG---- 49
A+ +FD++ +N WN+MI GY A A G S R+ V + EM+ +G
Sbjct: 100 ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIE 159
Query: 50 -QKADNF--TYPFVLKACGDLLLREMGIRVHGLVVVDGL-------ESDVYVGNSLISMY 99
+KA PF LK + +G+ V+ + D E + +V + ++S Y
Sbjct: 160 IEKARELFERMPFELKNVKAWSVM-LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGY 218
Query: 100 LKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML 159
+ GD+ AR +F ++ RDL WNT+++GY +NG + DA F +M+ G D T+
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 160 ALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA 219
++LSAC L +G+ VH + N + N+FV+N++IDMY C + A +FE ++
Sbjct: 279 SILSACAQSGRLDVGREVHSLI--NHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS 336
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
V+ NS+IS G + LE+F M PDE+T I+VL AC
Sbjct: 337 VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC----------- 385
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
VH + +G + + + T + N F C ++ G GK
Sbjct: 386 VHGGFLMEGLKIFSEMKTQDVK--PNVKHFGC------------------LIHLLGRSGK 425
Query: 340 GREAISIFNEMLGKNITPDEGVFTAVLSAC 369
+EA + EM ++ P++ V A+L AC
Sbjct: 426 LKEAYRLVKEM---HVKPNDTVLGALLGAC 452
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 161/377 (42%), Gaps = 69/377 (18%)
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
+ ++ ++ G A V++ +RR G+ G L L + + + LGK +H ++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ ++ V +S+I MY C + ARK+F+ + ++ +WN++I GY G A
Sbjct: 75 FG--VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 244 ELFGQMFIGGAVPDEVTVISVL-GACSRIS---------------------ALLLGSSVH 281
LF ++ + + VT I ++ G RI +++LG V+
Sbjct: 133 GLFEEISV---CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVN 189
Query: 282 SYLVKKGYGM-------NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF 334
+ ++ N V + ++S Y G A F + + L W ++ G+
Sbjct: 190 NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGY 249
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
+G +AI F M G+ PD +++LSAC+ SG +D G+E+ + + +E
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIELN 308
Query: 395 TTHYSCLVDLLGRAGKLD----------------------------------EAYATIDN 420
+ L+D+ + G L+ E ++T+++
Sbjct: 309 QFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES 368
Query: 421 MKLKPNEDVWTALLSAC 437
+ LKP+E + A+L+AC
Sbjct: 369 LDLKPDEITFIAVLTAC 385
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGY--------ACSAGGNSSSRSLVLYREMLS----- 47
M A+ F+ I KN+F+W+ M+ GY A + +R LV++ +++
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 48 ---------------FGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVG 92
G + D T +L AC ++G VH L+ G+E + +V
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 312
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
N+LI MY K GD+ A VF+ + VR + N+M+S +G+ +A +F M L
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLK 372
Query: 153 GDGTTMLALLSAC 165
D T +A+L+AC
Sbjct: 373 PDEITFIAVLTAC 385
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 223/455 (49%), Gaps = 33/455 (7%)
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMD--LKLGKAVHG 179
SW + ++ +NG +A F M +G+ + T +ALLS CGD LG +HG
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 180 YVVR-------------------NSGRLSN-----------NEFVTNSMIDMYCNCDFIS 209
Y + GR N N+MID Y +
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A K+F+ + +D +SW ++I+G+ K G + L F +M I G PD V +I+ L AC+
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
+ AL G VH Y++ + + N V SLI +Y CG A + F + +++ SW
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDY 389
++ GF +G E++ F +M K PD FT L+ACSH GLV+EG F M DY
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 390 NVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH-RNVKLAEI 448
+ P HY CLVDL RAG+L++A + +M +KPNE V +LL+AC H N+ LAE
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAER 397
Query: 449 SAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVH 508
+ L +++ S YV LSN+YAA+ +W P +S E++ +H
Sbjct: 398 LMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMH 457
Query: 509 QFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDT 543
F AGD +H ++ I L+ ++ L+ G + +T
Sbjct: 458 VFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 183/415 (44%), Gaps = 70/415 (16%)
Query: 42 YREMLSFGQKADNFTYPFVLKACGDLLL--REMGIRVHGLVVVDGLESD-VYVGNSLISM 98
+ +M G + ++ T+ +L CGD +G +HG GL+ + V VG ++I M
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 99 YLKFGDMGTARLVFD-------------------------------KMPVRDLTSWNTMM 127
Y K G ARLVFD KMP RDL SW M+
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
+G+VK G +A + F M+ SG+ D ++A L+AC +L L G VH YV+ S
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL--SQD 236
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG 247
NN V+NS+ID+YC C + AR++F + + VSWNS+I G+ G A + L F
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+M G PD VT L ACS + L+ + + + K
Sbjct: 297 KMQEKGFKPDAVTFTGALTACSHVG--LVEEGLRYFQIMK-------------------- 334
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
C +R I + +V + G+ +A+ + M K P+E V ++L+
Sbjct: 335 ---CDYRISPRIE-----HYGCLVDLYSRAGRLEDALKLVQSMPMK---PNEVVIGSLLA 383
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
ACS+ G E K D NV+ + ++Y L ++ GK + A MK
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVK-SHSNYVILSNMYAADGKWEGASKMRRKMK 437
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 29/247 (11%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSR------------------------- 37
+A+L+FD + KNS WN+MI GY S +++++
Sbjct: 127 KARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGY 186
Query: 38 ---SLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNS 94
+L+ +REM G K D L AC +L G+ VH V+ +++V V NS
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS 246
Query: 95 LISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
LI +Y + G + AR VF M R + SWN+++ G+ NG A ++ V F M+ G D
Sbjct: 247 LIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPD 306
Query: 155 GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKL 214
T L+AC + ++ G + +++ R+S ++D+Y + A KL
Sbjct: 307 AVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Query: 215 FEGLAVK 221
+ + +K
Sbjct: 366 VQSMPMK 372
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 41/239 (17%)
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS--ALLLGSSV 280
TVSW S I+ + G + + F M + G P+ +T I++L C + + LG +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 281 HSYLVKKGYGMN-TAVGTSLISMYANCGSFLCAH-------------------------- 313
H Y K G N VGT++I MY+ G F A
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 314 -----RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
+ F+++P++ L SWT M+ GF G EA+ F EM + PD A L+A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 369 CSHSGLVDEGKEIF-YKMTRDY--NVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
C++ G + G + Y +++D+ NV + + L+DL R G ++ A NM+ +
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNS----LIDLYCRCGCVEFARQVFYNMEKR 270
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 266/534 (49%), Gaps = 67/534 (12%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+ +F+ + K+ NS++ GY + + +L L++E L+F AD T VLKA
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNG---YAEEALRLFKE-LNFS--ADAITLTTVLKA 196
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA--------------- 108
C +L + G ++H +++ G+E D + +SL+++Y K GD+ A
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSL 256
Query: 109 ----------------RLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
R +FD+ R + WN+M+SGY+ N +A V+F+ MR
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR- 315
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGY---------VVRNSGRL--------------- 188
D T+ A+++AC L L+ GK +H + +V S L
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 189 -----SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
S + + NSMI +Y +C I A+++FE + K +SWNS+ +G+ + G + L
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
E F QM DEV++ SV+ AC+ IS+L LG V + G + V +SLI +Y
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
CG R F+ + W M++G+ +G+G EAI +F +M I P + F
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFM 555
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
VL+AC++ GLV+EG+++F M D+ P H+SC+VDLL RAG ++EA ++ M
Sbjct: 556 VVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ +W+++L C + + + +A+K+ E++P YV LS I+A W
Sbjct: 616 DVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDW 669
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 198/436 (45%), Gaps = 49/436 (11%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+++ +FD+ + LWNSMI GY N +LVL+ EM + + D+ T V+
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYI---ANNMKMEALVLFNEMRN-ETREDSRTLAAVIN 326
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVG------------------------------ 92
AC L E G ++H GL D+ V
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 93 -NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL 151
NS+I +Y G + A+ VF+++ + L SWN+M +G+ +NG + F M + L
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 152 VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
D ++ +++SAC + L+LG+ V L +++ V++S+ID+YC C F+
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVG--LDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
R++F+ + D V WNS+ISGY G F+ ++LF +M + G P ++T + VL AC+
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 272 SALLLGSSV-HSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP-DKSLASWTV 329
+ G + S V G+ + + ++ + A G A E+P D + W+
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 330 MVTGF---GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
++ G G G++A E+ P+ V LSA + E + K+
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIEL-----EPENSVAYVQLSAIFATSGDWESSALVRKLM 679
Query: 387 RDYNV--EPTTTHYSC 400
R+ NV P ++ C
Sbjct: 680 RENNVTKNPGSSWTDC 695
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 170/390 (43%), Gaps = 78/390 (20%)
Query: 57 YPFVLKACGDLLLREMGIRVHGLVVVDG-LESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
Y +L++C + + +GL++ G L S V V N L+ MY + G MG AR +FD+M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
P R+ SWNTM+ GY+ +GE G + FD M DG
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER----DG-------------------- 124
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
+ N ++ + +S AR+LF + KD V+ NSL+ GY
Sbjct: 125 -----------------YSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G A + L LF ++ D +T+ +VL AC+ + AL G +H+ ++ G ++ +
Sbjct: 168 NGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKM 224
Query: 296 GTSLISMYANCGSFLCAHRAFNEI---PDKSLAS-------------------------- 326
+SL+++YA CG A +I D SL++
Sbjct: 225 NSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCV 284
Query: 327 --WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
W M++G+ + EA+ +FNEM + D AV++AC G ++ GK++
Sbjct: 285 ILWNSMISGYIANNMKMEALVLFNEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCH 343
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
+ + + S L+D+ + G EA
Sbjct: 344 ACK-FGLIDDIVVASTLLDMYSKCGSPMEA 372
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 231/448 (51%), Gaps = 16/448 (3%)
Query: 38 SLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLIS 97
+L L+ ++ + T+ VL AC L E G +VH L++ G E+ +LI
Sbjct: 68 TLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALID 127
Query: 98 MYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT 157
MY K+G + + VF+ + +DL SWN ++SG+++NG+ +A VF M R + T
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 158 MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG 217
+ +++ C L L+ GK VH VV L + +MI Y + I+ A K++
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLV---VLGTAMISFYSSVGLINEAMKVYNS 244
Query: 218 LAV-KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
L V D V NSLISG C E F + + P+ + S L CS S L +
Sbjct: 245 LNVHTDEVMLNSLISG---CIRNRNYKEAF--LLMSRQRPNVRVLSSSLAGCSDNSDLWI 299
Query: 277 GSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGI 336
G +H ++ G+ ++ + L+ MY CG + A F IP KS+ SWT M+ + +
Sbjct: 300 GKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAV 359
Query: 337 HGKGREAISIFNEML--GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
+G G +A+ IF EM G + P+ F V+SAC+H+GLV EGKE F M Y + P
Sbjct: 360 NGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPG 419
Query: 395 TTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNED----VWTALLSACRLHRNVKLAEISA 450
T HY C +D+L +AG+ +E + ++ M N+ +W A+LSAC L+ ++ E A
Sbjct: 420 TEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVA 479
Query: 451 QKLF-EMDPNKVSGYVCLSNIYAAEKRW 477
++L E P S YV +SN YAA +W
Sbjct: 480 RRLMEETGPENASIYVLVSNFYAAMGKW 507
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 19/269 (7%)
Query: 187 RLSNNEFVTNSMIDMYCNCDFI----SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
RL N VT ++ C FI + A LF+ L +D S NS +S + + G
Sbjct: 12 RLGN---VTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDT 68
Query: 243 LELFGQMFIGGAVPD--EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
L LF Q I A PD T VLGACS +S G VH+ ++K+G T T+LI
Sbjct: 69 LALFLQ--IHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY+ G + + R F + +K L SW +++GF +GKG+EA+ +F M + + E
Sbjct: 127 DMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEF 186
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMT---RDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
++V+ C+ ++ +GK++ + RD V T ++ G ++EA
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTA-----MISFYSSVGLINEAMKV 241
Query: 418 IDNMKLKPNEDVWTALLSACRLHRNVKLA 446
+++ + +E + +L+S C +RN K A
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 237/495 (47%), Gaps = 38/495 (7%)
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEA 136
H +++ GL D I G + A VF P + NTM+ E
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEP 94
Query: 137 GD---AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
A V+ + D T +L + D+ G+ +HG VV ++
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG--FDSSVH 152
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDT------------------------------ 223
V +I MY +C + ARK+F+ + VKD
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 224 ---VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSV 280
VSW +ISGY K G A + +E+F +M + PDEVT+++VL AC+ + +L LG +
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 281 HSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
SY+ +G ++ ++I MYA G+ A F + ++++ +WT ++ G HG G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
EA+++FN M+ + P++ F A+LSACSH G VD GK +F M Y + P HY C
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 401 LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNK 460
++DLLGRAGKL EA I +M K N +W +LL+A +H +++L E + +L +++PN
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 461 VSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQS 520
Y+ L+N+Y+ RW S E+ V++F +GD +H Q
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQV 512
Query: 521 DDIYAKLKDLNEQLK 535
+ I+ L++++ Q++
Sbjct: 513 ERIHEILQEMDLQIQ 527
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 210/450 (46%), Gaps = 72/450 (16%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+F N++L N+MIR + N+ S ++ +YR++ + K D FT+PFVLK
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR 128
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ G ++HG VVV G +S V+V LI MY G +G AR +FD+M V+D+ WN +
Sbjct: 129 VSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 127 M---------------------------------SGYVKNGEAGDAFVVFDHMRRSGLVG 153
+ SGY K+G A +A VF M +
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 154 DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARK 213
D T+LA+LSAC DL L+LG+ + YV + ++ + N++IDMY I+ A
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYV--DHRGMNRAVSLNNAVIDMYAKSGNITKALD 306
Query: 214 LFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISA 273
+FE + ++ V+W ++I+G G + L +F +M G P++VT I++L ACS +
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366
Query: 274 LLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTG 333
+ LG + + + K YG ++ N + C M+
Sbjct: 367 VDLGKRLFNSMRSK-YG-----------IHPNIEHYGC------------------MIDL 396
Query: 334 FGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP 393
G GK REA + M K + ++ ++L+A + ++ G+ ++ + +EP
Sbjct: 397 LGRAGKLREADEVIKSMPFK---ANAAIWGSLLAASNVHHDLELGERALSELIK---LEP 450
Query: 394 TTT-HYSCLVDLLGRAGKLDEAYATIDNMK 422
+ +Y L +L G+ DE+ + MK
Sbjct: 451 NNSGNYMLLANLYSNLGRWDESRMMRNMMK 480
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 129/308 (41%), Gaps = 42/308 (13%)
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSL 229
+LK K H Y++ L+ + I+ N + A +F +T N++
Sbjct: 27 NLKTLKQSHCYMIITG--LNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 230 I---SGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
I S ++ + ++ +++ A PD T VL R+S + G +H +V
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL---------------------- 324
G+ + V T LI MY +CG A + F+E+ K +
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 325 -----------ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
SWT +++G+ G+ EAI +F ML +N+ PDE AVLSAC+ G
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 374 LVDEGKEI-FYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
++ G+ I Y R N + + ++D+ ++G + +A + + + N WT
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLN--NAVIDMYAKSGNITKALDVFECVNER-NVVTWTT 321
Query: 433 LLSACRLH 440
+++ H
Sbjct: 322 IIAGLATH 329
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 250/513 (48%), Gaps = 65/513 (12%)
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
+V +S++ Y K G + AR +FD+M R++ +W M+ GY K G D F +F MR
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 148 RSGLVG-DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD 206
+ G V + T+ + AC D + + G +HG V R L + F+ NS++ MY
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP--LEFDLFLGNSLMSMYSKLG 324
Query: 207 FISGARKLFEGLAVKDTVSWNSLISG-------------YEKCGGAFQV----------- 242
++ A+ +F + KD+VSWNSLI+G +EK G V
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 243 -------LELFGQM--------------FIGGA-----------------VPDEVTVISV 264
+ELFG M F+ P+ T SV
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL 324
L A + ++ L+ G +H +VK + +V SL+SMY CG+ A++ F+ I + ++
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Query: 325 ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
S+ M++G+ +G G++A+ +F+ + P+ F A+LSAC H G VD G + F
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
M YN+EP HY+C+VDLLGR+G LD+A I M KP+ VW +LLSA + H V
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVD 624
Query: 445 LAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELN 504
LAE++A+KL E++P+ + YV LS +Y+ + P S+ L
Sbjct: 625 LAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILK 684
Query: 505 KMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKV 537
VH F AGD S ++I LK + ++++ +
Sbjct: 685 GEVHNFLAGDESQLNLEEIGFTLKMIRKEMELI 717
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 162/409 (39%), Gaps = 72/409 (17%)
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
++ NS IS + + G++ A +F +M R + SW M+S Y +NG+ A+ VFD M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 149 SGLVGDGTTMLALLSACGDL-------MDLKLGKAVH------GYVVRNSGRLSNNEFV- 194
+ A++ DL D+ AV G+V +GR EF+
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFV--RAGRFDEAEFLY 167
Query: 195 -------------------------------------------TNSMIDMYCNCDFISGA 211
+SM+ YC I A
Sbjct: 168 AETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL-GACSR 270
R LF+ + ++ ++W ++I GY K G LF +M G V ++V+ AC
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
GS +H + + + +G SL+SMY+ G A F + +K SW +
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 331 VTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYN 390
+TG + EA +F +M GK++ +T ++ S G + + E+F M N
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVS----WTDMIKGFSGKGEISKCVELFGMMPEKDN 403
Query: 391 VEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTALLSA 436
+ ++ ++ G +EA M K PN ++++LSA
Sbjct: 404 IT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 165/612 (26%), Positives = 272/612 (44%), Gaps = 78/612 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ +FD + ++ WN+M+ Y+ ++ L+ ++ K D++++ +
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYS---RLGLHQEAIALFTQLRFSDAKPDDYSFTAI 76
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFD------- 113
L C L + G ++ LV+ G + + V NSLI MY K D +A VF
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 114 --------------------------KMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
+MP R +WN M+SG+ G+ +F M
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML 196
Query: 148 RSGLVGDGTTMLALLSAC-GDLMDLKLGKAVHGYVVRNS--------------------- 185
S D T +L++AC D ++ G+ VH +++N
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 186 ----GRLSNNEFVT----NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
L + E +T NS+ID A ++F K+ V+W ++I+GY + G
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 238 GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT 297
Q L F +M G D +VL ACS ++ L G +H L+ G+ VG
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN 376
Query: 298 SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
+L+++YA CG A RAF +I +K L SW M+ FG+HG +A+ +++ M+ I P
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKP 436
Query: 358 DEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA--- 414
D F +L+ CSHSGLV+EG IF M +DY + H +C++D+ GR G L EA
Sbjct: 437 DNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Query: 415 ---YATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIY 471
Y+++ + N W LL AC H + +L ++ L +P++ +V LSN+Y
Sbjct: 497 ATTYSSL--VTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLY 554
Query: 472 AAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLN 531
+ RW P S+ E+ V F GD+SH + +++ L L
Sbjct: 555 CSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQ 614
Query: 532 EQLKKVGYMPDT 543
+++ P+T
Sbjct: 615 HEMRN----PET 622
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 175/414 (42%), Gaps = 73/414 (17%)
Query: 94 SLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG 153
S I+ K G + +AR VFD MP D +WNTM++ Y + G +A +F +R S
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 154 DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARK 213
D + A+LS C L ++K G+ + V+R+ + V NS+IDMY C A K
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSG--FCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 214 LFEGLAV---------------------------------KDTVSWNSLISGYEKCGGAF 240
+F + + +WN +ISG+ CG
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISA-LLLGSSVHSYLVKKGYGMNTAVGTSL 299
L LF +M PD T S++ ACS S+ ++ G VH+ ++K G+ S+
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 300 ISMYANCGSFLCAHRAFNEI-------------------------------PDKSLASWT 328
+S Y GS A R I P+K++ +WT
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
M+TG+G +G G +A+ F EM+ + D + AVL ACS L+ GK I +
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH- 365
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLH 440
+ + LV+L + G + EA ++ N+D+ W +L A +H
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI---ANKDLVSWNTMLFAFGVH 416
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
TS I+ A G A + F+ +P+ +W M+T + G +EAI++F ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
PD+ FTA+LS C+ G V G++I + R + S L+D+ G+ A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNS-LIDMYGKCSDTLSANK 126
Query: 417 TIDNMKLKP-NEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVS 462
+M NE W +LL A + N + E + EM P +V+
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEM-PKRVA 169
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 257/528 (48%), Gaps = 71/528 (13%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREM-----LSFGQKADNF 55
+ +A+ +FD++ ++SF WN+MI GY A +L+L+ +M +S+ F
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGY---AKNRRIGEALLLFEKMPERNAVSWSAMITGF 177
Query: 56 TYPFVLKACGDLLLREMGIR--------VHGLV-----------------VVDGLESDVY 90
+ + +L R+M ++ V GL+ +V G E VY
Sbjct: 178 CQNGEVDS-AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMP---------------VRDLTSWNTMMSGYVKNGE 135
N+LI Y + G + AR +FD++P +++ SWN+M+ Y+K G+
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 136 AGDAFVVFDHMRRSGLVG-----DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSN 190
A ++FD M+ + DG ++ + L + H +
Sbjct: 297 VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSW---------- 346
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
N M+ Y + + AR FE K TVSWNS+I+ YEK + ++LF +M
Sbjct: 347 -----NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
I G PD T+ S+L A + + L LG +H +VK + V +LI+MY+ CG +
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIM 460
Query: 311 CAHRAFNEIP-DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
+ R F+E+ + + +W M+ G+ HG EA+++F M I P F +VL+AC
Sbjct: 461 ESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNAC 520
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
+H+GLVDE K F M Y +EP HYS LV++ G+ +EA I +M +P++ V
Sbjct: 521 AHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTV 580
Query: 430 WTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
W ALL ACR++ NV LA ++A+ + ++P + YV L N+YA W
Sbjct: 581 WGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLW 628
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 210/469 (44%), Gaps = 53/469 (11%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+ IF+++ +N+ WN+MI GY R + R++ K D T+ +
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYV-------KRREMNQARKLFDVMPKRDVVTWNTM 108
Query: 61 LK---ACGDLLLREMGIRVHGLVVVDGLES-DVYVGNSLISMYLKFGDMGTARLVFDKMP 116
+ +CG + E ++ D + S D + N++IS Y K +G A L+F+KMP
Sbjct: 109 ISGYVSCGGIRFLEEARKL-----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
R+ SW+ M++G+ +NGE A V+F M V D + + AL++ G + + +L +A
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMP----VKDSSPLCALVA--GLIKNERLSEA 217
Query: 177 VHGYVVRNSGRLSNNE----FVTNSMIDMYCNCDFISGARKLFEGLA------------- 219
+V+ G L + + N++I Y + AR LF+ +
Sbjct: 218 --AWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 220 --VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLG 277
K+ VSWNS+I Y K G LF QM D ++ +++ +S +
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGYVHVSRMEDA 331
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIH 337
++ S + + + ++S YA+ G+ A F + P+K SW ++ + +
Sbjct: 332 FALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH 397
+EA+ +F M + PD T++LSA +GLV+ + V P
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVKTVIPDVPV 445
Query: 398 YSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
++ L+ + R G++ E+ D MKLK W A++ H N A
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 170/401 (42%), Gaps = 65/401 (16%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
N ++ ++ G + AR +F+K+ R+ +WNTM+SGYVK E A +FD M + +V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
TM++ +CG + L+ + + + S + F N+MI Y I A
Sbjct: 104 -TWNTMISGYVSCGGIRFLEEARKLFDEMP------SRDSFSWNTMISGYAKNRRIGEAL 156
Query: 213 KLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
LFE + ++ VSW+++I+G+ + G + LF +M + + P +++ L R+S
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-LCALVAGLIKNERLS 215
Query: 273 --ALLLGSS----------VHSY-LVKKGYGM---------------------------- 291
A +LG V++Y + GYG
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 292 ----NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIF 347
N S+I Y G + A F+++ D+ SW M+ G+ + +A ++F
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 348 NEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
+EM + D + ++S + G V+ + F K E T ++ ++ +
Sbjct: 336 SEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTP-----EKHTVSWNSIIAAYEK 386
Query: 408 AGKLDEAYATIDNMKL---KPNEDVWTALLSACRLHRNVKL 445
EA M + KP+ T+LLSA N++L
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
TN ++ +I+ AR +FE L ++TV+WN++ISGY K Q +LF M
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKK-GYGMNTAVGTSLISMYANCGSFLCAH 313
V T+IS +C I L + + + + NT +IS YA A
Sbjct: 103 VTWN-TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNT-----MISGYAKNRRIGEAL 156
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITP 357
F ++P+++ SW+ M+TGF +G+ A+ +F +M K+ +P
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 237/454 (52%), Gaps = 14/454 (3%)
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGT----ARLVFDKMPVRDLTSWNTMMSGYVK 132
H L ++ GL + Y + L++ +L ++ A +FD + + + ++TM+ +
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 133 NGEAG---DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
+ + F++ + T L+ AC +GK +H +VV+N LS
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM 249
+ V ++ +Y + ARK+F+ + D V W+ L++GY +CG + LE+F +M
Sbjct: 151 DGH-VQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM 209
Query: 250 FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY-GMNTAVGTSLISMYANCGS 308
+ G PDE +V + L AC+++ AL G +H ++ KK + + VGT+L+ MYA CG
Sbjct: 210 LVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGC 269
Query: 309 FLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN-ITPDEGVFTAVLS 367
A F ++ +++ SW ++ G+ +G ++A + + + ++ I PD V VL+
Sbjct: 270 IETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLA 329
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE 427
AC+H G ++EG+ + M Y + P HYSC+VDL+ RAG+LD+A I+ M +KP
Sbjct: 330 ACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLA 389
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKV----SGYVCLSNIYAAEKRWXXXXXX 483
VW ALL+ CR H+NV+L E++ Q L +++ V + V LSNIY + +R
Sbjct: 390 SVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKV 449
Query: 484 XXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSH 517
P +S E++ +V +F +GD SH
Sbjct: 450 RGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSH 483
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 174/370 (47%), Gaps = 10/370 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A IFD I NSF++++MIR + S+ + R +L + T+ F++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 64 CGDLLLREMGIRVHGLVVVDGL-ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C +G ++H VV +G+ SD +V ++ +Y++ + AR VFD++P D+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W+ +M+GYV+ G + VF M G+ D ++ L+AC + L GK +H + V
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEF-V 244
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ + ++ FV +++DMY C I A ++FE L ++ SW +LI GY G A +
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 243 LELFGQM-FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TSL 299
++ G PD V ++ VL AC+ L G ++ + + YG+ + +
Sbjct: 305 TTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR-YGITPKHEHYSCI 363
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGFGIHGK---GREAISIFNEMLGKNI 355
+ + G A ++P K LAS W ++ G H G A+ ++ N+
Sbjct: 364 VDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNV 423
Query: 356 TPDEGVFTAV 365
+E +
Sbjct: 424 EEEEAALVQL 433
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 249/505 (49%), Gaps = 30/505 (5%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
QA+L+F ++ WNSMI ++ + F KA N V +
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNG-----------------FTHKAKNLFKEVVSE 489
Query: 63 -ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP-VRDL 120
+C L + + L D +S ++ G S+ K GD+ +A L + M RDL
Sbjct: 490 YSCSKFSLSTV---LAILTSCDSSDSLIF-GKSVHCWLQKLGDLTSAFLRLETMSETRDL 545
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV-GDGTTMLALLSACGDLMDLKLGKAVHG 179
TSWN+++SG +G ++ F M R G + D T+L +SA G+L + G+ HG
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG 605
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+++ L + N++I MY C I A K+F ++ + SWN +IS +
Sbjct: 606 LAIKSLRELDTQ--LQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+V +LF + + P+E+T + +L A +++ + G H +L+++G+ N V +L
Sbjct: 664 REVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN-ITPD 358
+ MY++CG + F S+++W +++ G HG G +A+ +F E+ + + P+
Sbjct: 721 VDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPN 780
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATI 418
+ F ++LSACSHSG +DEG + +M + V+P T H +VD+LGRAGKL EAY I
Sbjct: 781 KSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFI 840
Query: 419 DNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
+ VW ALLSAC H + KL + A+ LFEM+P+ S Y+ L+N Y W
Sbjct: 841 TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWE 900
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFEL 503
P YS ++
Sbjct: 901 EAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 200/438 (45%), Gaps = 33/438 (7%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLV---LYREMLSFGQKADNFTYPFVLKA 63
+FD++ K+ +WNSMI N + R + L+ EM+ G + D+ T A
Sbjct: 144 LFDELKEKDVIVWNSMITAL------NQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L L +H L + GL D + N+L+++Y K ++ +A VF M RD+ SW
Sbjct: 198 LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
NT+M+ + NG + F M SG D T ++SAC + +L LG+++HG V++
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
+ + V NS+I MY C A +FE L +D +S N++++G+ G +
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377
Query: 244 ELFGQM-FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK-KGYGMNTAVGTSLIS 301
+ QM + PD TV+S+ C +S G +VH Y V+ + V S+I
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY CG A F + L SW M++ F +G +A ++F E++ + +
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSL 497
Query: 362 FT--AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
T A+L++C S + GK + C L + G L A+ ++
Sbjct: 498 STVLAILTSCDSSDSLIFGKSVH-----------------C---WLQKLGDLTSAFLRLE 537
Query: 420 NMKLKPNEDVWTALLSAC 437
M + W +++S C
Sbjct: 538 TMSETRDLTSWNSVISGC 555
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 209/470 (44%), Gaps = 42/470 (8%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLK 62
A+ +F+++V ++ N+++ G+A + + + +M S + + D T +
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANG---MFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESD-VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
CGDL G VHG V ++S + V NS+I MY K G A L+F RDL
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHM--RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SWN+M+S + +NG A +F + S +T+LA+L++C L GK+VH
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
++ + D S +L +D SWNS+ISG G
Sbjct: 522 WLQKLG--------------------DLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 240 FQVLELFGQMFIGGAVP-DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
+ L F M G + D +T++ + A + +L G H +K ++T + +
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
LI+MY C A + F I D +L SW +++ + GRE +F + + P+
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPN 678
Query: 359 EGVFTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYAT 417
E F +LSA + G G + + + R + P + + LVD+ G L+
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKV 736
Query: 418 IDNMKLKPNEDVWTALLSACRLH----RNVKL-AEISAQKLFEMDPNKVS 462
N + + W +++SA H + ++L E+S+ EM+PNK S
Sbjct: 737 FRNSGVN-SISAWNSVISAHGFHGMGEKAMELFKELSSNS--EMEPNKSS 783
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 170/366 (46%), Gaps = 10/366 (2%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
VH + GL D+ + L++ Y + G++ ++ +FD++ +D+ WN+M++ +NG
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
A +F M G D TT+L SA L + +H + L + +
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG--LVGDSSLC 226
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
N+++++Y + +S A +F + +D VSWN++++ G + L+ F M G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYG--MNTAVGTSLISMYANCGSFLCAH 313
D VT V+ ACS I L LG S+H ++K GY + +VG S+ISMY+ CG A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG-KNITPDEGVFTAVLSACSHS 372
F E+ + + S ++ GF +G EA I N+M I PD ++ S C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--W 430
EG+ + R + ++D+ G+ G +A K + D+ W
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF---KTTTHRDLVSW 463
Query: 431 TALLSA 436
+++SA
Sbjct: 464 NSMISA 469
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 268/538 (49%), Gaps = 10/538 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ IFD + +++ WN+MI G S + L+ +R ML G FTY V
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVG---SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIV 306
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L C L +G +H ++V +D+ + N+L+ MY GDM A VF ++ +L
Sbjct: 307 LNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNL 366
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SWN+++SG +NG A +++ + R S D T A +SA + GK +HG
Sbjct: 367 VSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHG 426
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
V + S FV +++ MY A+K+F+ + +D V W +I G+ + G +
Sbjct: 427 QVTKLGYERS--VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS 484
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
++ F +M+ D ++ SV+GACS ++ L G H ++ G+ +V +L
Sbjct: 485 ELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGAL 544
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ MY G + A F+ + L W M+ + HG +A+S F ++L PD
Sbjct: 545 VDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDA 604
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+ ++L+ACSH G +GK ++ +M ++ ++ HYSC+V+L+ +AG +DEA I+
Sbjct: 605 VTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIE 663
Query: 420 NMKLKPNE-DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWX 478
N+ ++W LLSAC RN+++ +A+++ ++DP + ++ LSN+YA RW
Sbjct: 664 QSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWE 723
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
P S+ E+N Q F+ + Q + ++ ++ +D +LK+
Sbjct: 724 DVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFS--SGDQSNPEVVSQAQDELNRLKR 779
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 236/489 (48%), Gaps = 30/489 (6%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPF- 59
+ QA+ +FD++ +N ++ + SA S L+ +++ G F P
Sbjct: 38 LEQARKVFDKMPQRN------IVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLN 91
Query: 60 --------VLKACGDLLLREMGIRVHGLVVVDGL---ESDVYVGNSLISMYLKFGDMGTA 108
+ + C + + + ++H LV+ G Y N+LISMY++ G + A
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQA 151
Query: 109 RLVFDKMPVRDLTSWNTMMSGYVKNGE-AGDAFVVFDHMRRSGLVGDGTTMLALLSACGD 167
R VFDKMP R++ S+N + S Y +N + A AF + HM + + +T +L+ C
Sbjct: 152 RKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAV 211
Query: 168 LMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWN 227
L D+ +G +++ +++ S+N V S++ MY +C + AR++F+ + +D V+WN
Sbjct: 212 LEDVLMGSSLNSQIIKLG--YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 228 SLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKK 287
++I G K L F M + G P + T VL CS++ + LG +H+ ++
Sbjct: 270 TMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS 329
Query: 288 GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIF 347
+ + +L+ MY +CG A F I + +L SW +++G +G G +A+ ++
Sbjct: 330 DSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMY 389
Query: 348 NEMLGKNIT-PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
+L + PDE F+A +SA + GK + ++T+ E + + L+ +
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK-LGYERSVFVGTTLLSMYF 448
Query: 407 RAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM--DPNKVSGY 464
+ + + A D MK + + +WT ++ H + +E++ Q EM + N+ G+
Sbjct: 449 KNREAESAQKVFDVMKER-DVVLWTEMIVG---HSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 465 VCLSNIYAA 473
LS++ A
Sbjct: 505 -SLSSVIGA 512
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 190/405 (46%), Gaps = 10/405 (2%)
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMS--GYVKNGEA 136
V D Y N+LISMY++ + AR VFDKMP R++ + + + YV G +
Sbjct: 12 FVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS 71
Query: 137 GDAFVV----FDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR-NSGRLSNN 191
+ ++ F + L ++++ L C + LK + +H V+ +G + +
Sbjct: 72 LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG-AFQVLELFGQMF 250
+ N++I MY C + ARK+F+ + ++ VS+N+L S Y + A L M
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
P+ T S++ C+ + +L+GSS++S ++K GY N V TS++ MY++CG
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
A R F+ + ++ +W M+ G + K + + F ML + P + ++ VL+ CS
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVW 430
G GK I ++ ++ + L+D+ G + EA+ + PN W
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLD-NALLDMYCSCGDMREAFYVFGRIH-NPNLVSW 369
Query: 431 TALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEK 475
+++S C + + A + ++L M + Y + I A +
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 256/542 (47%), Gaps = 81/542 (14%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD + ++ + ++I+GYA N S ++ L+REM + G + T V+ AC
Sbjct: 129 LFDVMPERSCVSYTTLIKGYA---QNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 67 L-------LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
L +L+ + I++ LE V+V +L+ MY + AR +FD+MP R+
Sbjct: 186 LGGIWDCRMLQSLAIKLK-------LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERN 238
Query: 120 LTSWNTMMSGYVKNG-------------------------------EAGDAFVVFDHMRR 148
L +WN M++GY K G + +A V + M R
Sbjct: 239 LVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Query: 149 SGLVGDGTTMLALLSACG--------------------DLMDLKLGKAVHGYVVRNSGRL 188
G+ M+ LLSA D D +H Y V N +L
Sbjct: 299 CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKL 358
Query: 189 SNNEFVT---------NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+ +F N++I + + AR++F+ KD SWN++ISGY +
Sbjct: 359 ALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSP 418
Query: 240 FQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
L LF +M V PD +T++SV A S + +L G H YL N + +
Sbjct: 419 QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAA 478
Query: 299 LISMYANCGSFLCAHRAFNE---IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNI 355
+I MYA CGS A F++ I +++ W ++ G HG + A+ +++++ I
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 538
Query: 356 TPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
P+ F VLSAC H+GLV+ GK F M D+ +EP HY C+VDLLG+AG+L+EA
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAK 598
Query: 416 ATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEK 475
I M +K + +W LLSA R H NV++AE++A +L +DP+ V LSN+YA
Sbjct: 599 EMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAG 658
Query: 476 RW 477
RW
Sbjct: 659 RW 660
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 191/474 (40%), Gaps = 107/474 (22%)
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVF-------------------- 112
G ++H V+ GL+S+ Y+ NS+++MY K + A VF
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 113 -----------DKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLAL 161
D MP R S+ T++ GY +N + +A +F MR G++ + T+ +
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 162 LSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK 221
+SAC L + + + ++ +L FV+ +++ MYC C + ARKLF+ + +
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIK--LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER 237
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQ-------------------------------MF 250
+ V+WN +++GY K G Q ELF Q M
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA------ 304
G P EV ++ +L A +R G +H +VK+G+ + ++I YA
Sbjct: 298 RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIK 357
Query: 305 -------------------------NCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
G A F++ DK + SW M++G+
Sbjct: 358 LALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Query: 340 GREAISIFNEMLGKN-ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDY----NVEPT 394
+ A+ +F EM+ + + PD +V SA S G ++EGK DY + P
Sbjct: 418 PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR-----AHDYLNFSTIPPN 472
Query: 395 TTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WTALLSACRLHRNVKLA 446
+ ++D+ + G ++ A K + + W A++ H + KLA
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 158/376 (42%), Gaps = 44/376 (11%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ QA+ +FDQI K+ W +MI G N +LV Y EML G K +
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDG---CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDL 311
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L A + G+++HG +V G + ++ ++I Y D+ A F+ +
Sbjct: 312 LSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHI 371
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFD---------------------------HMRR----- 148
S N +++G+VKNG A VFD H+ R
Sbjct: 372 ASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISS 431
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
S + D TM+++ SA L L+ GK H Y+ N + N+ +T ++IDMY C I
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 209 SGARKLF---EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
A +F + ++ WN++I G G A L+L+ + P+ +T + VL
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGT--SLISMYANCGSFLCAHRAFNEIPDKS 323
AC + LG + + K +G+ + ++ + G A ++P K+
Sbjct: 550 SACCHAGLVELGKTYFESM-KSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 324 -LASWTVMVTGFGIHG 338
+ W ++++ HG
Sbjct: 609 DVMIWGMLLSASRTHG 624
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 36/198 (18%)
Query: 250 FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC--- 306
F G + E ++S LG+C+ + + G +H ++K G N + S+++MYA C
Sbjct: 33 FSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLL 92
Query: 307 ---------------GSFLC-------------AHRAFNEIPDKSLASWTVMVTGFGIHG 338
SF A + F+ +P++S S+T ++ G+ +
Sbjct: 93 ADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNN 152
Query: 339 KGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK-----EIFYKMTRDYNVEP 393
+ EA+ +F EM I +E V+SACSH G + + + I K+ V
Sbjct: 153 QWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVST 212
Query: 394 TTTHYSCLVDLLGRAGKL 411
H CL L A KL
Sbjct: 213 NLLHMYCLCLCLKDARKL 230
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 237/454 (52%), Gaps = 14/454 (3%)
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGT----ARLVFDKMPVRDLTSWNTMMSGYVK 132
H L ++ GL + Y + L++ +L ++ A +FD + + + ++TM+ +
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 133 NGEAG---DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
+ + F++ + T L+ AC +GK +H +VV+N LS
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM 249
++ V ++ +Y + ARK+F+ + D V W+ L++GY +CG + LE+F +M
Sbjct: 151 DSH-VQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM 209
Query: 250 FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY-GMNTAVGTSLISMYANCGS 308
+ G PDE +V + L AC+++ AL G +H ++ KK + + VGT+L+ MYA CG
Sbjct: 210 LVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGC 269
Query: 309 FLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN-ITPDEGVFTAVLS 367
A F ++ +++ SW ++ G+ +G ++A++ + ++ I PD V VL+
Sbjct: 270 IETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLA 329
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE 427
AC+H G ++EG+ + M Y + P HYSC+VDL+ RAG+LD+A I+ M +KP
Sbjct: 330 ACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLA 389
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKV----SGYVCLSNIYAAEKRWXXXXXX 483
VW ALL+ CR H+NV+L E++ + L +++ V + V LSNIY + +R
Sbjct: 390 SVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKV 449
Query: 484 XXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSH 517
P +S E++ V +F +GD SH
Sbjct: 450 RGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSH 483
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 175/370 (47%), Gaps = 10/370 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A IFD I NSF++++MIR + S+ + R +L + T+ F++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 64 CGDLLLREMGIRVHGLVVVDGL-ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C +G ++H VV +G+ SD +V ++ +Y++ + AR VFD++P D+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W+ +M+GYV+ G + VF M GL D ++ L+AC + L GK +H +V
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ S + ++ FV +++DMY C I A ++F+ L ++ SW +LI GY G A +
Sbjct: 246 KKSW-IESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 243 LELFGQM-FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TSL 299
+ ++ G PD V ++ VL AC+ L G S+ + + Y + + +
Sbjct: 305 MTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR-YEITPKHEHYSCI 363
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGFGIHGK---GREAISIFNEMLGKNI 355
+ + G A ++P K LAS W ++ G H G A+ ++ N+
Sbjct: 364 VDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNV 423
Query: 356 TPDEGVFTAV 365
+E +
Sbjct: 424 EEEEAALVQL 433
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 224/413 (54%), Gaps = 14/413 (3%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++H ++ GL Y + L+ + + A + ++P + +NT++S V N
Sbjct: 27 QIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYNTLISSIVSNH 85
Query: 135 EAGD---AFVVFDHM--RRSGLVGDGT-TMLALLSACG-DLMDLKLGKAVHGYVVRNSGR 187
+ AF ++D + RS V T +L A G D + G+A+H +V++
Sbjct: 86 NSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEP 145
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY---EKCGGAFQVLE 244
++++ FV +++ Y NC + AR LFE + D +WN+L++ Y E+ +VL
Sbjct: 146 VNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLL 205
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
LF +M + P+E+++++++ +C+ + + G H Y++K +N VGTSLI +Y+
Sbjct: 206 LFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYS 262
Query: 305 NCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTA 364
CG A + F+E+ + ++ + M+ G +HG G+E I ++ ++ + + PD F
Sbjct: 263 KCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+SACSHSGLVDEG +IF M Y +EP HY CLVDLLGR+G+L+EA I M +K
Sbjct: 323 TISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK 382
Query: 425 PNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
PN +W + L + + H + + EI+ + L ++ YV LSNIYA RW
Sbjct: 383 PNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRW 435
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 165/355 (46%), Gaps = 12/355 (3%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ---KADNFTYPFVLKA 63
I QI + FL+N++I + + + LY ++LS + + FTYP + KA
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA 121
Query: 64 CG-DLLLREMG--IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
G D G + H L ++ + D +V +L+ Y G + AR +F+++ DL
Sbjct: 122 SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDL 181
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+WNT+++ Y + E V R + + +++AL+ +C +L + G H Y
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVY 241
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
V++N+ L+ N+FV S+ID+Y C +S ARK+F+ ++ +D +N++I G G
Sbjct: 242 VLKNN--LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQ 299
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT--S 298
+ +EL+ + G VPD T + + ACS + G + + + K YG+ V
Sbjct: 300 EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGC 358
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGFGIHGKGREAISIFNEMLG 352
L+ + G A ++P K A+ W + HG +LG
Sbjct: 359 LVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+ +F++I + WN+++ YA S +S L+L+ M + + + +
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVAL 222
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+K+C +L G+ H V+ + L + +VG SLI +Y K G + AR VFD+M RD+
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
+ +N M+ G +G + ++ + GLV D T + +SAC
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISAC 327
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/637 (27%), Positives = 293/637 (45%), Gaps = 108/637 (16%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAG---------GNSSSRSLVLYREMLS---- 47
+ +A+ +FD+++ +N + WN++I Y ++ R L+ Y +LS
Sbjct: 39 LREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAK 98
Query: 48 -----------FGQK---------ADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLES 87
FG+ D+FT ++K L G ++HG++V G +
Sbjct: 99 TDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDG 158
Query: 88 DVYVGNSLISMYLKFG---------------------------------DMGTARLVFDK 114
+ +SLI MY K G D+ A VF +
Sbjct: 159 TKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWR 218
Query: 115 MP-VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKL 173
P + D SWNT+++GY +NG +A + M +GL D + A+L+ L LK+
Sbjct: 219 NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKI 278
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC----------------------DFISG- 210
GK VH V++N +N+FV++ ++D+YC C I G
Sbjct: 279 GKEVHARVLKNGSY--SNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGY 336
Query: 211 --------ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA--VPDEVT 260
A++LF+ L+ K+ V W ++ GY VLEL + FI PD +
Sbjct: 337 SSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL-ARAFIANETNTPDSLV 395
Query: 261 VISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP 320
++SVLGACS + + G +H + ++ G M+ + T+ + MY+ CG+ A R F+
Sbjct: 396 MVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSF 455
Query: 321 DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKE 380
++ + M+ G HG ++ F +M PDE F A+LSAC H GLV EG++
Sbjct: 456 ERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEK 515
Query: 381 IFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM-KLKPNEDVWTALLSACRL 439
F M YN+ P T HY+C++DL G+A +LD+A ++ + +++ + + A L+AC
Sbjct: 516 YFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSW 575
Query: 440 HRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYS 499
++N +L + +KL ++ + S Y+ ++N YA+ RW S
Sbjct: 576 NKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCS 635
Query: 500 FFELNKMVHQFFAGDTSHQQSDDIYAKL----KDLNE 532
+ ++K H F + D SH +++ IYA L KDL+E
Sbjct: 636 WANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 240/468 (51%), Gaps = 12/468 (2%)
Query: 74 IRVHGLVVVDGLESDVYVGNSLI---SMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGY 130
+++HG + + L++D ++ + L+ S+ L D+ AR + ++WN + GY
Sbjct: 30 LQIHGQIHLSSLQNDSFIISELVRVSSLSLA-KDLAFARTLLLHSSDSTPSTWNMLSRGY 88
Query: 131 VKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSN 190
+ ++ V+ M+R G+ + T LL AC + L G+ + V+++
Sbjct: 89 SSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHG--FDF 146
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
+ +V N++I +Y C S ARK+F+ + ++ VSWNS+++ + G V E F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
PDE T++ +L AC L LG VHS ++ + +N +GT+L+ MYA G
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN-ITPDEGVFTAVLSAC 369
A F + DK++ +W+ M+ G +G EA+ +F++M+ ++ + P+ F VL AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
SH+GLVD+G + F++M + + ++P HY +VD+LGRAG+L+EAY I M +P+ V
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 430 WTALLSACRLHRNVK---LAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXX 486
W LLSAC +H + + E ++L E++P + V ++N +A + W
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 487 XXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQL 534
S EL H+FF+G + IY L QL
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 175/367 (47%), Gaps = 52/367 (14%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
WN + RGY+ S +S S+ +Y EM G K + T+PF+LKAC L G ++
Sbjct: 81 WNMLSRGYSSS---DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGD 138
V+ G + DVYVGN+LI +Y AR VFD+M R++ SWN++M+ V+NG+
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 139 AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
F F M D TTM+ LLSACG +L LGK VH V+ L N + ++
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVR--ELELNCRLGTAL 253
Query: 199 IDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PD 257
+DMY + AR +FE + K+ +W+++I G + G A + L+LF +M +V P+
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN 317
VT + VL ACS H+ LV GY + F+
Sbjct: 314 YVTFLGVLCACS-----------HTGLVDDGY------------------------KYFH 338
Query: 318 EIP-----DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS-H 371
E+ + + MV G G+ EA +M PD V+ +LSACS H
Sbjct: 339 EMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM---PFEPDAVVWRTLLSACSIH 395
Query: 372 SGLVDEG 378
DEG
Sbjct: 396 HDEDDEG 402
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVL--YREMLSFGQKADNFTYPFVL 61
A+ +FD++ +N WNS++ +A + +LV + EM+ D T +L
Sbjct: 167 ARKVFDEMTERNVVSWNSIM-----TALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL 221
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
ACG L +G VH V+V LE + +G +L+ MY K G + ARLVF++M +++
Sbjct: 222 SACGGNL--SLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVW 279
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDH-MRRSGLVGDGTTMLALLSAC 165
+W+ M+ G + G A +A +F M+ S + + T L +L AC
Sbjct: 280 TWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 244/496 (49%), Gaps = 75/496 (15%)
Query: 51 KADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLI-SMYLKF-GDMGTA 108
+ N P + + C ++ + ++H +VV+GL S++ V LI S L G + A
Sbjct: 9 RTTNRRRPKLWQNCKNIRTLK---QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYA 65
Query: 109 RLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL 168
+FD++P D++ N ++ G ++ + ++ M + G+ D T +L AC L
Sbjct: 66 HKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKL 125
Query: 169 MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC-DF-------------------- 207
G A HG VVR+ L NE+V N++I + NC D
Sbjct: 126 EWRSNGFAFHGKVVRHGFVL--NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSS 183
Query: 208 ----------ISGARKLFEGLAVKDTV-------------------------------SW 226
I A +LF+ + KD V +W
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTW 243
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYL-- 284
N++ISGY CG + L +F +M G PD VT++S+L AC+ + L G +H Y+
Sbjct: 244 NAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Query: 285 ---VKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGR 341
V + T + +LI MYA CGS A F + D+ L++W ++ G +H
Sbjct: 304 TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAE 362
Query: 342 EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCL 401
+I +F EM + P+E F V+ ACSHSG VDEG++ F M YN+EP HY C+
Sbjct: 363 GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422
Query: 402 VDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKV 461
VD+LGRAG+L+EA+ +++MK++PN VW LL AC+++ NV+L + + +KL M ++
Sbjct: 423 VDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDES 482
Query: 462 SGYVCLSNIYAAEKRW 477
YV LSNIYA+ +W
Sbjct: 483 GDYVLLSNIYASTGQW 498
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 194/477 (40%), Gaps = 110/477 (23%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FD+I + + N ++RG SA +++ LY EM G D +T+ FVLKA
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRG---SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTAR-------------- 109
C L R G HG VV G + YV N+LI + GD+G A
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 110 -----------------LVFDKMPVRD-------------------------------LT 121
+FD+MP +D +
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+WN M+SGYV G +A +F MR +G D T+L+LLSAC L DL+ GK +H Y+
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 182 VRNSGRLSN---NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
+ + S+ + N++IDMY C I A ++F G+ +D +WN+LI G
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL-ALHH 360
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTS 298
A +E+F +M P+EVT I V+ ACS HS V +G
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACS-----------HSGRVDEGRKY------- 402
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
F +N P+ + + MV G G+ EA M I P+
Sbjct: 403 ----------FSLMRDMYNIEPN--IKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPN 447
Query: 359 EGVFTAVLSACSHSGLVDEGK---EIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
V+ +L AC G V+ GK E M +D + Y L ++ G+ D
Sbjct: 448 AIVWRTLLGACKIYGNVELGKYANEKLLSMRKD-----ESGDYVLLSNIYASTGQWD 499
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +FD+ K+ WN+MI GY +L +++EM G+ D T +
Sbjct: 225 MDSARELFDRFTEKDVVTWNAMISGY---VNCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 61 LKACGDLLLREMGIRVHGLVV-VDGLESDVYVG----NSLISMYLKFGDMGTARLVFDKM 115
L AC L E G R+H ++ + S +YVG N+LI MY K G + A VF +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
RDL++WNT++ G + G + +F+ M+R + + T + ++ AC + G+
Sbjct: 342 KDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLI 230
++R+ + N M+DM + A E + ++ + + W +L+
Sbjct: 401 KYFS-LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 239/495 (48%), Gaps = 40/495 (8%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISM-YLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
+V ++V GL ++ L+ L+ ++ AR +FD+ + + +++ Y +
Sbjct: 42 QVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSS 101
Query: 134 G--EAGDAFVVFDHM-RRS---------GLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
A AF F M RS LV T L+ + + H YV
Sbjct: 102 LPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYV 161
Query: 182 VRNSGRLSN---------------------NEFVTNSMIDMYCNCDFISGARKLFEGLAV 220
V + L + N +M+ Y IS A LFE +
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 221 KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGSS 279
+D SWN++++ + G + + LF +M ++ P+EVTV+ VL AC++ L L
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
+H++ ++ + V SL+ +Y CG+ A F KSL +W M+ F +HG+
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 340 GREAISIFNEMLGKNIT---PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
EAI++F EM+ NI PD F +L+AC+H GLV +G+ F MT + +EP
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM 456
HY CL+DLLGRAG+ DEA + MK+K +E +W +LL+AC++H ++ LAE++ + L +
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 457 DPNKVSGYVC-LSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDT 515
+PN GYV ++N+Y W PP +S E++ VHQF++ D
Sbjct: 462 NPNN-GGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDK 520
Query: 516 SHQQSDDIYAKLKDL 530
SH ++++IY L L
Sbjct: 521 SHPETEEIYMILDSL 535
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 195/453 (43%), Gaps = 85/453 (18%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFG-QKADNFTYPFVLK 62
A+ IFD+ F N+ L+ +++ Y+ S ++SS + +R M++ + ++F YP VLK
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASS-AFSFFRLMVNRSVPRPNHFIYPLVLK 134
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLK-FGDMGTARLVFDKMPVRDLT 121
+ L VH + G V V +L+ Y + AR +FD+M R++
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHM----------------------------RR----S 149
SW M+SGY ++G+ +A +F+ M RR
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 150 GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
+ + T++ +LSAC L+L K +H + R LS++ FV+NS++D+Y C +
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD--LSSDVFVSNSLVDLYGKCGNLE 312
Query: 210 GARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF---IGGAVPDEVTVISVLG 266
A +F+ + K +WNS+I+ + G + + + +F +M I PD +T I +L
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 267 ACSRISALLLGSSVHSYLVKKGYG----MNTAVGTSLISMYANCGSFLCAHRAFNEIPDK 322
AC+ H LV KG G M G +
Sbjct: 373 ACT-----------HGGLVSKGRGYFDLMTNRFGI-----------------------EP 398
Query: 323 SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF 382
+ + ++ G G+ EA+ + + M + DE ++ ++L+AC G +D +
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTM---KMKADEAIWGSLLNACKIHGHLDLAEVAV 455
Query: 383 YKMTRDYNVEPTTTHY-SCLVDLLGRAGKLDEA 414
+ + P Y + + +L G G +EA
Sbjct: 456 KNLVA---LNPNNGGYVAMMANLYGEMGNWEEA 485
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 244/488 (50%), Gaps = 35/488 (7%)
Query: 75 RVHGLVVVDGL-ESDVYVGNSL-ISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
++H L++ GL E + +V +L S GD+ A K+ WN ++ G+
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRN-------- 184
+ + V+ M R GL+ D T L+ + L + KLG ++H VV++
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 185 ---------------SGR-----LSNNEFVT-NSMIDMYCNCDFISGARKLFEGLAVKDT 223
S R + + VT NS++D Y + AR +F+ ++ +D
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 224 VSWNSLISGYEKCGGAFQVLELFGQMF-IGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
V+W+S+I GY K G + LE+F QM +G + +EVT++SV+ AC+ + AL G +VH
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 283 YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF--NEIPDKSLASWTVMVTGFGIHGKG 340
Y++ + + TSLI MYA CGS A F + + W ++ G HG
Sbjct: 266 YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFI 325
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
RE++ +F++M I PDE F +L+ACSH GLV E F+K ++ EP + HY+C
Sbjct: 326 RESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH-FFKSLKESGAEPKSEHYAC 384
Query: 401 LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNK 460
+VD+L RAG + +A+ I M +KP + ALL+ C H N++LAE +KL E+ P+
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHN 444
Query: 461 VSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQS 520
YV L+N+YA K++ +S +L+ H+F A D +H S
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 521 DDIYAKLK 528
D IYA L+
Sbjct: 505 DKIYAVLQ 512
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 39/342 (11%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
WN +IRG++ S + +S+ +Y +ML FG D+ TYPF++K+ L R++G +H
Sbjct: 76 WNFVIRGFSNS---RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 79 LVVVDGLESDVYVGNSLISMYLKF-------------------------------GDMGT 107
VV GLE D+++ N+LI MY F GD+ +
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 108 ARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV-GDGTTMLALLSACG 166
ARLVFD+M RD+ +W++M+ GYVK GE A +FD M R G + TM++++ AC
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 167 DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDT--V 224
L L GK VH Y++ L + S+IDMY C I A +F +VK+T +
Sbjct: 253 HLGALNRGKTVHRYIL--DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 225 SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYL 284
WN++I G G + L+LF +M PDE+T + +L ACS + L
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 285 VKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
+ G + ++ + + G AH +E+P K S
Sbjct: 371 KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS 412
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 35/254 (13%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSS---------------------------- 35
A+ +FD++ KN WNS++ YA S S+
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 36 SRSLVLYREMLSFG-QKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNS 94
+++L ++ +M+ G KA+ T V+ AC L G VH ++ L V + S
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 95 LISMYLKFGDMGTARLVFDKMPVR--DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
LI MY K G +G A VF + V+ D WN ++ G +G ++ +F MR S +
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGY-VVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
D T L LL+AC +K +A H + ++ SG +E M+D+ + A
Sbjct: 342 PDEITFLCLLAACSHGGLVK--EAWHFFKSLKESGAEPKSEHYA-CMVDVLSRAGLVKDA 398
Query: 212 RKLFEGLAVKDTVS 225
+ +K T S
Sbjct: 399 HDFISEMPIKPTGS 412
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 247/497 (49%), Gaps = 37/497 (7%)
Query: 69 LREMGIRVHGLVVVDGLESDVYVGNSLISMYLKF-GDMGTARLVFDKMPVRDLTSWNTMM 127
+RE+ ++H ++ GL SD + +++ DM A LVF ++ ++ WNT++
Sbjct: 38 MRELK-QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTII 96
Query: 128 SGYVKNGEAGDAFVVFDHMRRSG--LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
G+ ++ A +F M S + T ++ A G L + G+ +HG V++
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 186 GRLSNNEFVTNSMIDMY-------------------------------CNCDFISGARKL 214
L ++ F+ N+M+ MY C I A+ L
Sbjct: 157 --LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 215 FEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISAL 274
F+ + ++ VSWNS+ISG+ + G L++F +M PD T++S+L AC+ + A
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 275 LLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGF 334
G +H Y+V+ + +N+ V T+LI MY CG F P K L+ W M+ G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
+G A+ +F+E+ + PD F VL+AC+HSG V E F M Y +EP+
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 395 TTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLF 454
HY+ +V++LG AG L+EA A I NM ++ + +W++LLSACR NV++A+ +A+ L
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLK 454
Query: 455 EMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGD 514
++DP++ GYV LSN YA+ + S E++ VH+F +
Sbjct: 455 KLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCG 514
Query: 515 TSHQQSDDIYAKLKDLN 531
+H +S +IY+ L LN
Sbjct: 515 GTHPKSAEIYSLLDILN 531
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 196/412 (47%), Gaps = 71/412 (17%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREML--SFGQKADNFTYP 58
M A L+F +I KN F+WN++IRG++ S+ ++ ++ +ML S K TYP
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSS---FPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYL------------------ 100
V KA G L G ++HG+V+ +GLE D ++ N+++ MY+
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF 190
Query: 101 -------------KFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
K G + A+ +FD+MP R+ SWN+M+SG+V+NG DA +F M+
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 148 RSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
+ DG TM++LL+AC L + G+ +H Y+VRN R N V ++IDMYC C
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRN--RFELNSIVVTALIDMYCKCGC 308
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
I +FE K WNS+I G G + ++LF ++ G PD V+ I VL A
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 268 CSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
C+ S + + L+K+ Y + + S+ +
Sbjct: 369 CAH-SGEVHRADEFFRLMKEKY-----------------------------MIEPSIKHY 398
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
T+MV G G EA ++ M + D +++++LSAC G V+ K
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSACRKIGNVEMAK 447
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 139/321 (43%), Gaps = 32/321 (9%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
QAQ +FD++ +N WNSMI G+ +L ++REM K D FT +L
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFV---RNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC L E G +H +V + E + V +LI MY K G + VF+ P + L+
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
WN+M+ G NG A +F + RSGL D + + +L+AC A G V
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC----------AHSGEVH 376
Query: 183 RNSG--RLSNNEFVTNSMIDMYC-NCDFISGARKLFEGLAV-------KDTVSWNSLISG 232
R RL +++ I Y + + GA L E A+ +DTV W+SL+S
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
K G + PDE T VL + + S L +V L+ K M
Sbjct: 437 CRKIGNVEMAKR--AAKCLKKLDPDE-TCGYVLLSNAYASYGLFEEAVEQRLLMKERQME 493
Query: 293 TAVGTSLISM------YANCG 307
VG S I + + +CG
Sbjct: 494 KEVGCSSIEVDFEVHEFISCG 514
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 249/489 (50%), Gaps = 33/489 (6%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
+SF W ++R + ++ +Y +M + G + VL+ACG + G
Sbjct: 68 DSFSWGCLVRFLS---QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGK 124
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
+H + +GL VYV L+ +Y + G + A+ FD + ++ SWN+++ GY+++G
Sbjct: 125 PIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESG 184
Query: 135 EAGDAFVVFDHMRRSGLV------------GDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
E +A VFD + V GD +L SA + GYV
Sbjct: 185 ELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN 244
Query: 183 RNSGRLSNNEFVTN---------SMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGY 233
+L+ F +MI Y + A +LF ++ KD + ++++I+ Y
Sbjct: 245 CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACY 304
Query: 234 EKCGGAFQVLELFGQMFIGGAV--PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
+ G L+LF QM + PDE+T+ SV+ A S++ G+ V SY+ + G +
Sbjct: 305 TQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKI 364
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
+ + TSLI +Y G F A + F+ + K S++ M+ G GI+G EA S+F M+
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMI 424
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL 411
K I P+ FT +LSA SHSGLV EG + F M +D+N+EP+ HY +VD+LGRAG+L
Sbjct: 425 EKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRL 483
Query: 412 DEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKL--FEMDPNKVSGYVC-LS 468
+EAY I +M ++PN VW ALL A LH NV+ EI+ E DP +GY+ L+
Sbjct: 484 EEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDP---TGYLSHLA 540
Query: 469 NIYAAEKRW 477
IY++ RW
Sbjct: 541 MIYSSVGRW 549
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 99/264 (37%), Gaps = 39/264 (14%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGY----------------------------ACSAGG 32
M A+ FD + KN W +MI GY AC
Sbjct: 248 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 33 NSSSRSLVLYREMLSFGQ--KADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVY 90
+L L+ +ML + D T V+ A L G V + G++ D
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL 367
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
+ SLI +Y+K GD A +F + +D S++ M+ G NG A +A +F M
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNS---MIDMYCNCDF 207
+ + T LLSA G GY NS + N E + M+DM
Sbjct: 428 IPPNVVTFTGLLSAYS-----HSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGR 482
Query: 208 ISGARKLFEGLAVKDTVS-WNSLI 230
+ A +L + + ++ W +L+
Sbjct: 483 LEEAYELIKSMPMQPNAGVWGALL 506
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/560 (27%), Positives = 264/560 (47%), Gaps = 34/560 (6%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+ +FD + ++ W +I GY L RE + D+
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYI----------KLGDMREARELFDRVDSRKNVVT 111
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
A LR + + ++ + E +V N++I Y + G + A +FD+MP R++
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG-----DGTTMLALLSACGDLMDLKLGK 175
SWN+M+ V+ G +A +F+ M R +V DG + L D +
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 176 AVHGYVVRNSGRLSNN---------------EFVT-NSMIDMYCNCDFISGARKLFEGLA 219
+ + +G NN +F + N+MI + ++ A LF+ +
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSRISALLLGS 278
K+ +SW ++I+GY + + L +F +M G+V P+ T +S+L ACS ++ L+ G
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 279 SVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE--IPDKSLASWTVMVTGFGI 336
+H + K + N V ++L++MY+ G + A + F+ + + L SW M+ +
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 337 HGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTT 396
HG G+EAI ++N+M P + +L ACSH+GLV++G E F + RD ++
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 397 HYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM 456
HY+CLVDL GRAG+L + I+ + + + A+LSAC +H V +A+ +K+ E
Sbjct: 472 HYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLET 531
Query: 457 DPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTS 516
+ YV +SNIYAA + P S+ ++ K H F GD S
Sbjct: 532 GSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKS 591
Query: 517 HQQSDDIYAKLKDLNEQLKK 536
H Q + + + L DL +++K
Sbjct: 592 HPQFEALDSILSDLRNKMRK 611
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 165/351 (47%), Gaps = 36/351 (10%)
Query: 95 LISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
LI K G + AR +FD +P RD+ +W +++GY+K G+ +A +FD + V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 155 GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKL 214
T M++ G L +L A + N N+MID Y I A +L
Sbjct: 112 WTAMVS-----GYLRSKQLSIAEMLF----QEMPERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 215 FEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM-----FIGGAVPDEVTVISVLGACS 269
F+ + ++ VSWNS++ + G + + LF +M A+ D + +
Sbjct: 163 FDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 270 RISALLLGSSVHSY-LVKKGYGMNTAVG-----------------TSLISMYANCGSFLC 311
R+ + ++ S+ + GY N + ++I+ +
Sbjct: 223 RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNK 282
Query: 312 AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACS 370
A F+ +P+K++ SWT M+TG+ + + EA+++F++ML ++ P+ G + ++LSACS
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 371 H-SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
+GLV EG++I +++ + + S L+++ ++G+L A DN
Sbjct: 343 DLAGLV-EGQQIHQLISKSVH-QKNEIVTSALLNMYSKSGELIAARKMFDN 391
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 222/453 (49%), Gaps = 43/453 (9%)
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDA 139
V + +E +V + S+I+ YL D+ +AR FD P RD+ WNTM+SGY++ G +A
Sbjct: 50 VFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEA 109
Query: 140 FVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMI 199
+FD M C D+M N+++
Sbjct: 110 RSLFDQM-----------------PCRDVMSW------------------------NTVL 128
Query: 200 DMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF-IGGAVPDE 258
+ Y N + ++F+ + ++ SWN LI GY + G +VL F +M G VP++
Sbjct: 129 EGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND 188
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYG-MNTAVGTSLISMYANCGSFLCAHRAFN 317
T+ VL AC+++ A G VH Y GY ++ V +LI MY CG+ A F
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 318 EIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDE 377
I + L SW M+ G HG G EA+++F+EM I+PD+ F VL AC H GLV++
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVED 308
Query: 378 GKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
G F M D+++ P H C+VDLL RAG L +A I+ M +K + +W LL A
Sbjct: 309 GLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGAS 368
Query: 438 RLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPS 497
++++ V + E++ ++L +++P + +V LSNIY R+
Sbjct: 369 KVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAG 428
Query: 498 YSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDL 530
S+ E + + +F++ H +++++ L++L
Sbjct: 429 VSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 183/419 (43%), Gaps = 56/419 (13%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +F ++V KN LW SMI GY + + LV R + D + +
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLN-------KDLVSARRYFDLSPERDIVLWNTM 96
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLE-SDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+ EMG + + D + DV N+++ Y GDM VFD MP R+
Sbjct: 97 ISG-----YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG-LVGDGTTMLALLSACGDLMDLKLGKAVH 178
+ SWN ++ GY +NG + F M G +V + TM +LSAC L GK VH
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
Y G + V N++IDMY C I A ++F+G+ +D +SWN++I+G G
Sbjct: 212 KYG-ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 239 AFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT- 297
+ L LF +M G PD+VT + VL AC H LV+ G ++ T
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACK-----------HMGLVEDGLAYFNSMFTD 319
Query: 298 -SLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
S++ +CG + L S +T +A+ N+M +
Sbjct: 320 FSIMPEIEHCGCVV------------DLLSRAGFLT---------QAVEFINKM---PVK 355
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP-TTTHYSCLVDLLGRAGKLDEA 414
D ++ +L A VD G+ ++ + +EP ++ L ++ G AG+ D+A
Sbjct: 356 ADAVIWATLLGASKVYKKVDIGEVALEELIK---LEPRNPANFVMLSNIYGDAGRFDDA 411
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 233/485 (48%), Gaps = 36/485 (7%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFD 144
L + V L+ L ++ AR +FD +N ++ Y + + ++ V+++
Sbjct: 12 LRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYN 71
Query: 145 HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN 204
+ GL T + +A + + +H R+ ++ F ++I Y
Sbjct: 72 LLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSG--FESDSFCCTTLITAYAK 129
Query: 205 CDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM----------FIGG- 253
+ AR++F+ ++ +D WN++I+GY++ G +ELF M I G
Sbjct: 130 LGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGF 189
Query: 254 ---------------------AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
P+ +TV+SVL AC+ + L +G + Y + G+ N
Sbjct: 190 SQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDN 249
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPD-KSLASWTVMVTGFGIHGKGREAISIFNEML 351
V + I MY+ CG A R F E+ + ++L SW M+ HGK EA+++F +ML
Sbjct: 250 IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQML 309
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKL 411
+ PD F +L AC H G+V +G+E+F M + + P HY C++DLLGR GKL
Sbjct: 310 REGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKL 369
Query: 412 DEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIY 471
EAY I M +KP+ VW LL AC H NV++AEI+++ LF+++P V +SNIY
Sbjct: 370 QEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIY 429
Query: 472 AAEKRWXXXXXXXXXXXXXXXXXPPSYSFF-ELNKMVHQFFAGDTSHQQSDDIYAKLKDL 530
AA ++W YS+F E+ VH+F D SH +S +IY L+++
Sbjct: 430 AANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEI 489
Query: 531 NEQLK 535
++K
Sbjct: 490 FRRMK 494
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 179/407 (43%), Gaps = 73/407 (17%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSF-GQKADNFTYPFVLK 62
A+ +FD +FL+N +I+ Y + S+VLY +LSF G + + T+ F+
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVH---HQPHESIVLY-NLLSFDGLRPSHHTFNFIFA 90
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
A +H G ESD + +LI+ Y K G + AR VFD+M RD+
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRR----------SGLVGDGT---------------- 156
WN M++GY + G+ A +FD M R SG +G
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 157 ------TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
T++++L AC +L +L++G+ + GY N +N +V N+ I+MY C I
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENG--FFDNIYVCNATIEMYSKCGMIDV 268
Query: 211 ARKLFEGLA-VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACS 269
A++LFE L ++ SWNS+I G + L LF QM G PD VT + +L AC
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC- 327
Query: 270 RISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
VH +V KG + ++ ++I K L +
Sbjct: 328 ----------VHGGMVVKGQELFKSM------------------EEVHKISPK-LEHYGC 358
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD 376
M+ G GK +EA + M K PD V+ +L ACS G V+
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMK---PDAVVWGTLLGACSFHGNVE 402
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 108/242 (44%), Gaps = 25/242 (10%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A +FD + KN W ++I G+ S GN S + K ++ T V
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGF--SQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM-PVRD 119
L AC +L E+G R+ G +G ++YV N+ I MY K G + A+ +F+++ R+
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH- 178
L SWN+M+ +G+ +A +F M R G D T + LL AC VH
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC-----------VHG 330
Query: 179 GYVVRNSGRLSNNEFVTN---------SMIDMYCNCDFISGARKLFEGLAVK-DTVSWNS 228
G VV+ + E V MID+ + A L + + +K D V W +
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 229 LI 230
L+
Sbjct: 391 LL 392
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 243/468 (51%), Gaps = 7/468 (1%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FD+++ +N + N ++R + C G S R +Y M G + TY ++++ C
Sbjct: 169 LFDEMLDRNLAVCNLLLRCF-CQTG--ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 67 LLLREMGIRVHGLVVVDGLE-SDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
L G ++H LVV G S+++V N L+ Y GD+ + F+ +P +D+ SWN+
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
++S G D+ +F M+ G ++ L+ C D++ GK +H YV++
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMG 345
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
+S+ V +++IDMY C+ I + L++ L + NSL++ CG ++E+
Sbjct: 346 FDVSSLH-VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSS--VHSYLVKKGYGMNTAVGTSLISMY 303
FG M G DEVT+ +VL A S L S VH +K GY + AV SLI Y
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
G + + F+E+ ++ T ++ G+ +G G + + + EM N+ PDE
Sbjct: 465 TKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTIL 524
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
+VLS CSHSGLV+EG+ IF + Y + P Y+C+VDLLGRAG +++A + +
Sbjct: 525 SVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARG 584
Query: 424 KPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIY 471
+ W++LL +CR+HRN + +A+ L ++P + Y+ +S Y
Sbjct: 585 DADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFY 632
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 182/373 (48%), Gaps = 11/373 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRG---YACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
A FD++ ++ +N +I G Y CS R++ LY EM+S G + T+P V
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSL------RAIELYAEMVSCGLRESASTFPSV 118
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L C D L GI+VH V+ G +++V ++L+ +Y + A +FD+M R+L
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
N ++ + + GE+ F V+ M G+ +G T ++ C + GK +H
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
VV++ +SN FV N ++D Y C +SG+ + F + KD +SWNS++S G
Sbjct: 239 VVKSGWNISNI-FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA-VGTSL 299
L+LF +M G P +S L CSR S + G +H Y++K G+ +++ V ++L
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I MY C + + +P +L ++T G ++ I +F M+ + DE
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 360 GVFTAVLSACSHS 372
+ VL A S S
Sbjct: 418 VTLSTVLKALSLS 430
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 175/351 (49%), Gaps = 8/351 (2%)
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
VY N I +K G++ +A FD+M VRD+ ++N ++SG + G + A ++ M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
GL +T ++LS C D + + G VH V+ S N FV ++++ +Y +
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVI--SLGFGCNMFVRSALVGLYACLRLV 163
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
A KLF+ + ++ N L+ + + G + ++ E++ +M + G + +T ++ C
Sbjct: 164 DVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGC 223
Query: 269 SRISALLLGSSVHSYLVKKGYGM-NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASW 327
S + G +HS +VK G+ + N V L+ Y+ CG + R+FN +P+K + SW
Sbjct: 224 SHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISW 283
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF-YKMT 386
+V+ +G +++ +F++M P F + L+ CS + + GK+I Y +
Sbjct: 284 NSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK 343
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALL 434
++V S L+D+ G+ ++ + Y ++ + L+ + T+L+
Sbjct: 344 MGFDVSSLHVQ-SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLM 393
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 7/248 (2%)
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+ N ID + A + F+ ++V+D V++N LISG + G + + +EL+ +M
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
G T SVL CS G VH ++ G+G N V ++L+ +YA A
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
+ F+E+ D++LA +++ F G+ + ++ M + + + + ++ CSH
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 373 GLVDEGKEIFYKMTRD-YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV-- 429
LV EGK++ + + +N+ + LVD G L + + + + P +DV
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVA-NVLVDYYSACGDLSGSMRSFNAV---PEKDVIS 282
Query: 430 WTALLSAC 437
W +++S C
Sbjct: 283 WNSIVSVC 290
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 237/485 (48%), Gaps = 38/485 (7%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A+ +FD+IV + WN ++R Y G N + +V++ +ML + N T V
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRY-LEMGFNDEA--VVMFFKMLELNVRPLNHTVSSV 269
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ AC L E+G +H + V + +D V S+ MY+K + +AR VFD+ +DL
Sbjct: 270 MLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVG--------------------------- 153
SW + MSGY +G +A +FD M +V
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Query: 154 ----DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
D T++ +L+ C + D+++GK HG++ R+ N V N+++DMY C +
Sbjct: 390 IENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG--YDTNVIVANALLDMYGKCGTLQ 447
Query: 210 GARKLFEGLA-VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
A F ++ ++D VSWN+L++G + G + Q L F M + A P + T+ ++L C
Sbjct: 448 SANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGC 506
Query: 269 SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT 328
+ I AL LG ++H +L++ GY ++ + +++ MY+ C F A F E + L W
Sbjct: 507 ANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWN 566
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
++ G +G+ +E +F + + + PD F +L AC G V+ G + F M+
Sbjct: 567 SIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTK 626
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEI 448
Y++ P HY C+++L + G L + + M P + T + AC+ +R KL
Sbjct: 627 YHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAW 686
Query: 449 SAQKL 453
+A++L
Sbjct: 687 AAKRL 691
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 205/465 (44%), Gaps = 45/465 (9%)
Query: 31 GGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVY 90
GGN S VL+ + + + Y + ++C L +V +V ++
Sbjct: 42 GGNVSKAVSVLF----ASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIF 97
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
+ N I Y K G + AR +F++MP RD SWN +++ +NG + + F +F M R G
Sbjct: 98 LLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG 157
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
+ T+ +L +CG ++DL+L + +H VV+ S N + S++D+Y C +S
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYG--YSGNVDLETSIVDVYGKCRVMSD 215
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
AR++F+ + VSWN ++ Y + G + + +F +M P TV SV+ ACSR
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVM 330
AL +G +H+ VK +T V TS+ MY C A R F++ K L SWT
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 331 VTGFGIHGKGREAISIFNEMLGKNITP-------------------------------DE 359
++G+ + G REA +F+ M +NI D
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 360 GVFTAVLSACSHSGLVDEGKE---IFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
+L+ CS V GK+ Y+ D NV L+D+ G+ G L A
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANA----LLDMYGKCGTLQSANI 451
Query: 417 TIDNMKLKPNEDVWTALLS-ACRLHRNVKLAEISAQKLFEMDPNK 460
M +E W ALL+ R+ R+ + E P+K
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSK 496
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 207/401 (51%), Gaps = 31/401 (7%)
Query: 108 ARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGD 167
A VF + ++ +N M+ Y G ++ F M+ G+ D T LL +C
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 168 LMDLKLGKAVHGYVVR------------------NSGRLSN-----------NEFVTNSM 198
L DL+ GK VHG ++R + GR+ + N V N M
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 199 IDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDE 258
I +C+ + LF+ ++ + VSWNS+IS KCG + LELF +M G PDE
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMN-TAVGTSLISMYANCGSFLCAHRAFN 317
TV++VL + + L G +HS G + VG +L+ Y G A F
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 318 EIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACSHSGLVD 376
++ +++ SW +++G ++GKG I +F+ M+ + + P+E F VL+ CS++G V+
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 377 EGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
G+E+F M + +E T HY +VDL+ R+G++ EA+ + NM + N +W +LLSA
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 437 CRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
CR H +VKLAE++A +L +++P YV LSN+YA E RW
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRW 455
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 40/370 (10%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +F I N ++N+MI+ Y+ SL + M S G AD +TY +LK+
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVG---PPLESLSFFSSMKSRGIWADEYTYAPLLKS 111
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C L G VHG ++ G + ++ +Y G MG A+ VFD+M R++ W
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVW 171
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACG----------DLMD--- 170
N M+ G+ +G+ +F M +V +M++ LS CG +++D
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIV-SWNSMISSLSKCGRDREALELFCEMIDQGF 230
Query: 171 -------------------LKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA 211
L GK +H +SG + V N+++D YC + A
Sbjct: 231 DPDEATVVTVLPISASLGVLDTGKWIHS-TAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 212 RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACSR 270
+F + ++ VSWN+LISG G ++LF M G V P+E T + VL CS
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 271 ISALLLGSSVHSYLVKK-GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP-DKSLASWT 328
+ G + ++++ T +++ + + G A + +P + + A W
Sbjct: 350 TGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWG 409
Query: 329 VMVTGFGIHG 338
+++ HG
Sbjct: 410 SLLSACRSHG 419
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGG---------NSSSRSLV----------- 40
M AQ +FD++ +N +WN MIRG+ C +G S RS+V
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGF-CDSGDVERGLHLFKQMSERSIVSWNSMISSLSK 211
Query: 41 ---------LYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESD-VY 90
L+ EM+ G D T VL L + + G +H GL D +
Sbjct: 212 CGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT 271
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSG 150
VGN+L+ Y K GD+ A +F KM R++ SWNT++SG NG+ +FD M G
Sbjct: 272 VGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG 331
Query: 151 LVG-DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
V + T L +L+ C ++ G+ + G ++ + E +M+D+ I+
Sbjct: 332 KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY-GAMVDLMSRSGRIT 390
Query: 210 GARKLFEGLAVK-DTVSWNSLISG 232
A K + + V + W SL+S
Sbjct: 391 EAFKFLKNMPVNANAAMWGSLLSA 414
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 212/413 (51%), Gaps = 7/413 (1%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPFVLK 62
A+ +FD+IV ++ +W +MI G A +L L+R M+S + N +L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLA---HNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 63 ACGDLLLREMGIRVHGLVV-VDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
GD+ ++G VH V+ +V + LI +Y K GDM + R VF R+
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
SW +MSGY NG A M++ G D T+ +L C +L +K GK +H Y
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
++N L N VT+ M+ MY C +LF+ L ++ +W ++I Y +
Sbjct: 445 LKNLF-LPNVSLVTSLMV-MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
+E+F M + PD VT+ VL CS + AL LG +H +++KK + V +I
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIK 562
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY CG A+ +F+ + K +WT ++ +G + R+AI+ F +M+ + TP+
Sbjct: 563 MYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFT 622
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA 414
FTAVLS CS +G VDE F M R YN++P+ HYS +++LL R G+++EA
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 220/436 (50%), Gaps = 9/436 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
AQ +FD+ N + WN+++RG S G L + EM G + ++ V K+
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVIS-GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKS 223
Query: 64 -CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
G LR+ G++ H L + +GL + V++ SL+ MY K G +G AR VFD++ RD+
Sbjct: 224 FAGASALRQ-GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVV 282
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
W M++G N +A +F M + + + +L GD+ LKLGK VH +V
Sbjct: 283 WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQ 241
+++ + FV + +ID+YC C ++ R++F G ++ +SW +L+SGY G Q
Sbjct: 343 LKSKNYV-EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQ 401
Query: 242 VLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
L M G PD VT+ +VL C+ + A+ G +H Y +K + N ++ TSL+
Sbjct: 402 ALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMV 461
Query: 302 MYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
MY+ CG R F+ + +++ +WT M+ + + R I +F ML PD
Sbjct: 462 MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVT 521
Query: 362 FTAVLSACSHSGLVDEGKEIF-YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
VL+ CS + GKE+ + + +++ P + + ++ + G+ G L A + D
Sbjct: 522 MGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDA 579
Query: 421 MKLKPNEDVWTALLSA 436
+ +K WTA++ A
Sbjct: 580 VAVK-GSLTWTAIIEA 594
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 199/425 (46%), Gaps = 11/425 (2%)
Query: 14 KNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMG 73
KN ++ + I+ +A N+ +L + + G + T+ +L+AC G
Sbjct: 74 KNPYIIHRDIQIFA---RQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
+VH + ++GLES+ ++ L+ MY G + A+ VFD+ ++ SWN ++ G V +
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 134 GEA--GDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
G+ D F MR G+ + ++ + + L+ G H ++N L N+
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNG--LFNS 248
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
F+ S++DMY C + AR++F+ + +D V W ++I+G ++ L LF M
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS 308
Query: 252 GGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVK-KGYGMNTAVGTSLISMYANCGSF 309
+ P+ V + ++L + AL LG VH++++K K Y V + LI +Y CG
Sbjct: 309 EEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDM 368
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
R F ++ SWT +++G+ +G+ +A+ M + PD VL C
Sbjct: 369 ASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVC 428
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
+ + +GKEI ++ + P + + L+ + + G + D ++ + N
Sbjct: 429 AELRAIKQGKEIHCYALKNLFL-PNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR-NVKA 486
Query: 430 WTALL 434
WTA++
Sbjct: 487 WTAMI 491
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 6/300 (2%)
Query: 139 AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
A + D++ + G+ + TT ALL AC L GK VH ++ N L +NEF+ +
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRING--LESNEFLRTKL 152
Query: 199 IDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA-FQ-VLELFGQMFIGGAVP 256
+ MY C + A+K+F+ + SWN+L+ G G +Q VL F +M G
Sbjct: 153 VHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL 212
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
+ ++ +V + + SAL G H+ +K G + + TSL+ MY CG A R F
Sbjct: 213 NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVF 272
Query: 317 NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG-KNITPDEGVFTAVLSACSHSGLV 375
+EI ++ + W M+ G + + EA+ +F M+ + I P+ + T +L +
Sbjct: 273 DEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKAL 332
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLS 435
GKE+ + + N +S L+DL + G + K + N WTAL+S
Sbjct: 333 KLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR-NAISWTALMS 391
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 201/400 (50%), Gaps = 7/400 (1%)
Query: 103 GDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL 162
GD+ +R + D+ P+ L WN +M Y+++ DA V+ M RS ++ D ++ ++
Sbjct: 68 GDIFRSR-ILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 163 SACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD 222
A + D LGK +H VR +EF + I +YC ARK+F+ +
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLG--FVGDEFCESGFITLYCKAGEFENARKVFDENPERK 182
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
SWN++I G G A + +E+F M G PD+ T++SV +C + L L +H
Sbjct: 183 LGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHK 242
Query: 283 YLV--KKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
++ K + + SLI MY CG A F E+ +++ SW+ M+ G+ +G
Sbjct: 243 CVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNT 302
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
EA+ F +M + P++ F VLSAC H GLV+EGK F M ++ +EP +HY C
Sbjct: 303 LEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC 362
Query: 401 LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNK 460
+VDLL R G+L EA ++ M +KPN VW L+ C +V++AE A + E++P
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWN 422
Query: 461 VSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSF 500
YV L+N+YA W P+YS+
Sbjct: 423 DGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 146/282 (51%), Gaps = 16/282 (5%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
I DQ + +FLWN+++R Y S ++ +Y M+ D ++ P V+KA
Sbjct: 75 ILDQ--YPIAFLWNNIMRSYIRH---ESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQ 129
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTM 126
+ +G +H + V G D + + I++Y K G+ AR VFD+ P R L SWN +
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ G G A +A +F M+RSGL D TM+++ ++CG L DL L +H V++
Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT 249
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELF 246
++ + NS+IDMY C + A +FE + ++ VSW+S+I GY G + LE F
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECF 309
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
QM G P+++T + VL AC VH LV++G
Sbjct: 310 RQMREFGVRPNKITFVGVLSAC-----------VHGGLVEEG 340
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 27/159 (16%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M A IF+++ +N W+SMI GYA A GN+ +L +R+M FG + + T+ V
Sbjct: 271 MDLASHIFEEMRQRNVVSWSSMIVGYA--ANGNTLE-ALECFRQMREFGVRPNKITFVGV 327
Query: 61 LKACGDLLLREMGIRVHGLVVVDG------------LESDVYVGNSLISMYLKFGDMGTA 108
L AC VHG +V +G LE + ++ + + G + A
Sbjct: 328 LSAC-----------VHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 109 RLVFDKMPVR-DLTSWNTMMSGYVKNGEAGDAFVVFDHM 146
+ V ++MP++ ++ W +M G K G+ A V +M
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYM 415
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 271/595 (45%), Gaps = 76/595 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +FD+I +N+ WN+++ GY + + R L+ +M G + T
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR---LFSDMRKQGVEPTRVTVSTC 280
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L A ++ E G + H + +V+G+E D +G SL++ Y K G + A +VFD+M +D+
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACG-------------- 166
+WN ++SGYV+ G DA + MR L D T+ L+SA
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Query: 167 --------------DLMDL--KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
+MD+ K G V V +S + + + N+++ Y
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGE 459
Query: 211 ARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVT------ 260
A +LF G+ ++ + ++WN +I + G + ++F QM G +P+ ++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 261 -----------------------------VISVLGACSRISALLLGSSVHSYLVKK-GYG 290
+ L AC+ +++L +G ++H Y+++ +
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHS 579
Query: 291 MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEM 350
++ TSL+ MYA CG A + F L M++ + ++G +EAI+++ +
Sbjct: 580 SLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGK 410
G + PD T VLSAC+H+G +++ EIF + +++P HY +VDLL AG+
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 411 LDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNI 470
++A I+ M KP+ + +L+++C R +L + ++KL E +P YV +SN
Sbjct: 700 TEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNA 759
Query: 471 YAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFEL--NKMVHQFFAGDTSHQQSDDI 523
YA E W P S+ ++ + VH F A D +H + ++I
Sbjct: 760 YAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 224/437 (51%), Gaps = 9/437 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+++F ++ +N F W ++I G C G +L+ + EML DNF P V KA
Sbjct: 126 AEVLFSKLRVRNVFSWAAII-GVKCRIG--LCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG L G VHG VV GLE V+V +SL MY K G + A VFD++P R+ +W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N +M GYV+NG+ +A +F MR+ G+ T+ LSA ++ ++ GK H +
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N L N + S+++ YC I A +F+ + KD V+WN +ISGY + G +
Sbjct: 303 NGMELDN--ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI 360
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+ M + D VT+ +++ A +R L LG V Y ++ + + + ++++ MY
Sbjct: 361 YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CGS + A + F+ +K L W ++ + G EA+ +F M + + P+ +
Sbjct: 421 AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN 480
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK- 422
++ + +G VDE K++F +M + + P ++ +++ + + G +EA + M+
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 423 --LKPNEDVWTALLSAC 437
L+PN T LSAC
Sbjct: 540 SGLRPNAFSITVALSAC 556
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 179/366 (48%), Gaps = 6/366 (1%)
Query: 73 GIRVHGLVVVDG--LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGY 130
G ++H ++ +G + Y+ L+ Y K + A ++F K+ VR++ SW ++
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 131 VKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSN 190
+ G A + F M + + D + + ACG L + G+ VHGYVV++ L +
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG--LED 206
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
FV +S+ DMY C + A K+F+ + ++ V+WN+L+ GY + G + + LF M
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFL 310
G P VTV + L A + + + G H+ + G ++ +GTSL++ Y G
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE 326
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
A F+ + +K + +W ++++G+ G +AI + M + + D ++SA +
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVW 430
+ + GKE+ R ++ E S ++D+ + G + +A D+ ++ + +W
Sbjct: 387 RTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILW 444
Query: 431 TALLSA 436
LL+A
Sbjct: 445 NTLLAA 450
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%)
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
TS+ +S KNGE +A + M L +L C DL GK +H
Sbjct: 36 TSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHAR 95
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++N + NE++ ++ Y CD + A LF L V++ SW ++I + G
Sbjct: 96 ILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
L F +M PD V +V AC + G VH Y+VK G V +SL
Sbjct: 156 GALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY CG A + F+EIPD++ +W ++ G+ +GK EAI +F++M + + P
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 361 VFTAVLSACSHSGLVDEGKE 380
+ LSA ++ G V+EGK+
Sbjct: 276 TVSTCLSASANMGGVEEGKQ 295
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 224/395 (56%), Gaps = 5/395 (1%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARL-VFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVF 143
L S+V + + L+ Y K + L VF MP R++ SWN ++ + ++G A + +F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 144 DHM-RRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMY 202
M R S + D T+ +L AC + K G +H ++ S++ FV+++++ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLG--FSSSLFVSSALVIMY 179
Query: 203 CNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVI 262
+ + ARKLF+ + V+D+V + ++ GY + G A L +F +M G D V ++
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 263 SVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK 322
S+L AC ++ AL G SVH + +++ + +G ++ MY C AH F + +
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 323 SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIF 382
+ SW+ ++ G+G+ G + +F+EML + I P+ F VLSAC+H GLV E ++
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV-EKSWLY 358
Query: 383 YKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRN 442
+++ ++YN+ P HY+ + D + RAG L+EA +++M +KP+E V A+LS C+++ N
Sbjct: 359 FRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 418
Query: 443 VKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
V++ E A++L ++ P K S YV L+ +Y+A R+
Sbjct: 419 VEVGERVARELIQLKPRKASYYVTLAGLYSAAGRF 453
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 201/426 (47%), Gaps = 46/426 (10%)
Query: 2 PQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVL--YREMLSFGQKADNFTYPF 59
P + +F + ++N F WN +I G +G S S L L +RE + D+FT P
Sbjct: 84 PTSLSVFWHMPYRNIFSWNIII-GEFSRSGFASKSIDLFLRMWRESCV---RPDDFTLPL 139
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
+L+AC + G +H L + G S ++V ++L+ MY+ G + AR +FD MPVRD
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRD 199
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
+ M GYV+ GEA +F M SG D M++LL ACG L LK GK+VHG
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHG 259
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGA 239
+ +R L N + N++ DMY C + A +F ++ +D +SW+SLI GY G
Sbjct: 260 WCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDV 317
Query: 240 FQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL 299
+LF +M G P+ VT + VL AC+ H LV+K +
Sbjct: 318 VMSFKLFDEMLKEGIEPNAVTFLGVLSACA-----------HGGLVEKSW---------- 356
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ + +N +P+ L + + G EA +M + PDE
Sbjct: 357 --------LYFRLMQEYNIVPE--LKHYASVADCMSRAGLLEEAEKFLEDM---PVKPDE 403
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP-TTTHYSCLVDLLGRAGKLDEAYATI 418
V AVLS C G V+ G+ + ++ + ++P ++Y L L AG+ DEA +
Sbjct: 404 AVMGAVLSGCKVYGNVEVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLR 460
Query: 419 DNMKLK 424
MK K
Sbjct: 461 QWMKEK 466
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 216/452 (47%), Gaps = 44/452 (9%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
WN++I +A + ++L L+ M G + TY VL + L G ++HG
Sbjct: 284 WNAII---CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGD 138
+++ +G E+ + +GN+LI Y K G++ +RL FD + +++ WN ++SGY N +
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPI 399
Query: 139 AFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSM 198
+F M + G T L +C + +L+ +H +VR +N++V +S+
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCC-VTELQ---QLHSVIVRMG--YEDNDYVLSSL 453
Query: 199 IDMYCN----------CDFISGAR----------------------KLFEGLAVKDTVSW 226
+ Y D+ SG KL L DTVSW
Sbjct: 454 MRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSW 513
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
N I+ + +V+ELF M PD+ T +S+L CS++ L LGSS+H + K
Sbjct: 514 NIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITK 573
Query: 287 KGYG-MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAIS 345
+ +T V LI MY CGS + F E +K+L +WT +++ GIHG G+EA+
Sbjct: 574 TDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALE 633
Query: 346 IFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLL 405
F E L PD F ++L+AC H G+V EG +F KM +DY VEP HY C VDLL
Sbjct: 634 KFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLL 692
Query: 406 GRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
R G L EA I M + VW L C
Sbjct: 693 ARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 206/459 (44%), Gaps = 37/459 (8%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+FDQ+ +N +N++I+GY S G+ ++ ++ EM FG + T +L +C
Sbjct: 71 VFDQMPERNKVSFNTIIKGY--SKYGDVD-KAWGVFSEMRYFGYLPNQSTVSGLL-SCAS 126
Query: 67 LLLREMGIRVHGLVVVDGL-ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
L +R G ++HGL + GL +D +VG L+ +Y + + A VF+ MP + L +WN
Sbjct: 127 LDVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
MMS G + F + R G ++ L +L + DL + K +H +
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG 245
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
L V NS+I Y C A ++F+ D VSWN++I K + L+L
Sbjct: 246 --LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKL 303
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F M G P++ T +SVLG S + L G +H L+K G +G +LI YA
Sbjct: 304 FVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK 363
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
CG+ + F+ I DK++ W +++G+ + G +S+F +ML P E F+
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 366 LSACS-------HSGLVDEGKE----IFYKMTRDYNVEPTTTHYSCLVD----------- 403
L +C HS +V G E + + R Y L+D
Sbjct: 423 LKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 404 -----LLGRAGKLDEAYATIDNMKLKPNEDVWTALLSAC 437
+ R G+ E+ I ++ +P+ W ++AC
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 175/366 (47%), Gaps = 5/366 (1%)
Query: 70 REMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSG 129
R + + + L VYV N++IS+Y K G++ A VFD+MP R+ S+NT++ G
Sbjct: 30 RTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKG 89
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
Y K G+ A+ VF MR G + + +T+ LLS C L D++ G +HG ++ G
Sbjct: 90 YSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASL-DVRAGTQLHGLSLK-YGLFM 146
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQM 249
+ FV ++ +Y D + A ++FE + K +WN ++S G + + F ++
Sbjct: 147 ADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFREL 206
Query: 250 FIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSF 309
GA E + + VL S + L + +H KKG +V SLIS Y CG+
Sbjct: 207 VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNT 266
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
A R F + + SW ++ +A+ +F M +P++G + +VL
Sbjct: 267 HMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVS 326
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV 429
S L+ G++I + ++ E + L+D + G L+++ D ++ K N
Sbjct: 327 SLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK-NIVC 384
Query: 430 WTALLS 435
W ALLS
Sbjct: 385 WNALLS 390
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 202/480 (42%), Gaps = 59/480 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMI-----RGYACSAGGNSSSRSLVLYREMLSFGQKADNF 55
+ A+ +F+ + FK+ WN M+ RG+ + +RE++ G
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFL--------KECMFFFRELVRMGASLTES 216
Query: 56 TYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
++ VLK + ++ ++H GL+ ++ V NSLIS Y K G+ A +F
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
D+ SWN ++ K+ A +F M G + T +++L + L G+
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEK 235
+HG +++N + N++ID Y C + +R F+ + K+ V WN+L+SGY
Sbjct: 337 QIHGMLIKNG--CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 236 CGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAV 295
G L LF QM G P E T + L +C ++ L +HS +V+ GY N V
Sbjct: 395 KDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCC-VTEL---QQLHSVIVRMGYEDNDYV 449
Query: 296 GTSLISMYANC--------------------------------GSFLCAHRAFNEIPDKS 323
+SL+ YA G + + + + +
Sbjct: 450 LSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPD 509
Query: 324 LASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFY 383
SW + + E I +F ML NI PD+ F ++LS CS + G I
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 384 KMTR-DYNVEPTTTHYSC--LVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLH 440
+T+ D++ T + C L+D+ G+ G + + + K N WTAL+S +H
Sbjct: 570 LITKTDFSCADT---FVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIH 625
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 151 LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG 210
L +++LL+ C KA+H + L +V N++I +Y +S
Sbjct: 8 LANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSL 67
Query: 211 ARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
A K+F+ + ++ VS+N++I GY K G + +F +M G +P++ TV +L +C+
Sbjct: 68 AGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCAS 126
Query: 271 ISALLLGSSVHSYLVKKGYGMNTA-VGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV 329
+ + G+ +H +K G M A VGT L+ +Y A + F ++P KSL +W
Sbjct: 127 LD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 330 MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
M++ G G +E + F E++ + E F VL S +D K++ T+
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATK 243
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 192/391 (49%), Gaps = 36/391 (9%)
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRS-GLVGDGTTMLALLSACGDLMDLKLGKAVH 178
L S +S Y G A +F M S L D L +C LG +VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGG 238
+ V+++ +N FV +++DMY C +S ARKLF+ + ++ V WN++IS Y CG
Sbjct: 72 AHSVKSN--FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 239 AFQVLELFGQM-----------FIGGAV----------------------PDEVTVISVL 265
+ +EL+ M I G V P+ +T+++++
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA 325
ACS I A L +HSY + + + + L+ Y CGS + F+ + D+ +
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 326 SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKM 385
+W+ +++ + +HG A+ F EM +TPD+ F VL ACSH+GL DE F +M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 386 TRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKL 445
DY + + HYSCLVD+L R G+ +EAY I M KP W ALL ACR + ++L
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 446 AEISAQKLFEMDPNKVSGYVCLSNIYAAEKR 476
AEI+A++L ++P + YV L IY + R
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGR 400
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 162/348 (46%), Gaps = 40/348 (11%)
Query: 21 SMIRGYACSAGGNSSSRSLVLYREM-LSFGQKADNFTYPFVLKACGDLLLREMGIRVHGL 79
S+ + + A + ++L L+ +M SF D + LK+C +G VH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDA 139
V S+ +VG +L+ MY K + AR +FD++P R+ WN M+S Y G+ +A
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 140 FVVFDHMRR-----------SGLVG--DGT--------------------TMLALLSACG 166
+++ M GLVG DG+ T+LAL+SAC
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 167 DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
+ +L K +H Y RN + + + + +++ Y C I + +F+ + +D V+W
Sbjct: 194 AIGAFRLIKEIHSYAFRN--LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
+SLIS Y G A L+ F +M + PD++ ++VL ACS + L + V+ ++
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH-AGLADEALVYFKRMQ 310
Query: 287 KGYGMNTAVG--TSLISMYANCGSFLCAHRAFNEIPDKSLA-SWTVMV 331
YG+ + + L+ + + G F A++ +P+K A +W ++
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGY--------------ACSAGGNSSS------------ 36
A+ +FD+I +N+ +WN+MI Y A N SS
Sbjct: 101 HARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTE 160
Query: 37 ----RSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVG 92
R++ YR+M+ F K + T ++ AC + + +H + +E +
Sbjct: 161 DGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLK 220
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
+ L+ Y + G + +LVFD M RD+ +W++++S Y +G+A A F M + +
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG----RLSNNEFVTNSMIDMYCNCDFI 208
D L +L AC L Y R G R S + + + ++D+
Sbjct: 281 PDDIAFLNVLKACS---HAGLADEALVYFKRMQGDYGLRASKDHY--SCLVDVLSRVGRF 335
Query: 209 SGARKLFEGLAVKDTV-SWNSLI 230
A K+ + + K T +W +L+
Sbjct: 336 EEAYKVIQAMPEKPTAKTWGALL 358
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 200/388 (51%), Gaps = 39/388 (10%)
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
++ GA+PD + + +C+ + +L VH + ++ + + + +ISM+ C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
S A R F+ + DK + SW +M+ + +G G +A+ +F EM + P+E F V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNE 427
AC+ G ++E F M ++ + P T HY ++ +LG+ G L EA I ++ +P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXX 487
D W A+ + RLH ++ L + + + ++DP+K ++ I
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK----AVINKI----------------- 444
Query: 488 XXXXXXXPPSYSFFELN-----KMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPD 542
PP SF E N + +F ++ ++ AK K V Y+PD
Sbjct: 445 -----PTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK--------KGVVYVPD 491
Query: 543 TSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSK 602
T VL+D++ E KE+ L HSERLA+A+ +I T P T+ I KNLRVC DCH +K++SK
Sbjct: 492 TRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSK 551
Query: 603 LMSREIIMRDICRFHHFRDGICSCGGYW 630
++ R +I+RD RFHHF+DG CSCG YW
Sbjct: 552 IIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 12/238 (5%)
Query: 138 DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNS 197
DA + D G + D + L +C +L L+ K VH + +++ R + + N
Sbjct: 223 DAIELLD----KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFR--GDPKLNNM 276
Query: 198 MIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPD 257
+I M+ C I+ A+++F+ + KD SW+ ++ Y G L LF +M G P+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSL--ISMYANCGSFLCAHRA 315
E T ++V AC+ + + + +H +K +G++ L + + CG + A +
Sbjct: 337 EETFLTVFLACATVGG-IEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 316 FNEIPDKSLAS-WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
++P + A W M +HG + + E L ++ P + V + + S
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGD--IDLEDYMEELMVDVDPSKAVINKIPTPPPKS 451
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 44 EMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFG 103
E+L G D + + ++C +L E +VH + D + N +ISM+ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 104 DMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLS 163
+ A+ VFD M +D+ SW+ MM Y NG DA +F+ M + GL + T L +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 164 ACG 166
AC
Sbjct: 346 ACA 348
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 196/376 (52%), Gaps = 11/376 (2%)
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
V D ++ + C L +VH + ++ + L+ MY+NCG A
Sbjct: 251 VVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAAS 310
Query: 315 AFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
F ++ +K+L +W +++ F +G G +AI +F+ + PD +F + AC G
Sbjct: 311 VFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGD 370
Query: 375 VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALL 434
VDEG F M+RDY + P+ Y LV++ G LDEA ++ M ++PN DVW L+
Sbjct: 371 VDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
Query: 435 SACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXX 494
+ R+H N++L + A+ + +DP +++ ++
Sbjct: 431 NLSRVHGNLELGDYCAEVVEFLDPTRLN-----------KQSREGFIPVKASDVEKESLK 479
Query: 495 PPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEV 554
S + + +F AGDT+ ++D+++ L++L + +VGY+ +T L+D++ E
Sbjct: 480 KRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQES 539
Query: 555 KEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDIC 614
KE +L HSER+A A A++N+ P + KNLRVCVDCH +K++S ++ RE+I RDI
Sbjct: 540 KETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIK 599
Query: 615 RFHHFRDGICSCGGYW 630
RFH ++G C+C YW
Sbjct: 600 RFHQMKNGACTCKDYW 615
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 129 GYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRL 188
+ K+G+ A D + V D + +L L CG+ L+ K VHG + S +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKI---SASV 284
Query: 189 SNNEFVTNS-MIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG 247
S+ + +N +++MY NC + A +FE ++ K+ +W +I + K G +++F
Sbjct: 285 SHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFS 344
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TSLISMYAN 305
+ G +PD + AC + + G +H + + YG+ ++ SL+ MYA
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYAL 403
Query: 306 CGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHG 338
G A +P + ++ W ++ +HG
Sbjct: 404 PGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT 121
K CG+ + VHG + D+ + L+ MY G A VF+KM ++L
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
+W ++ + KNG DA +F + G + DG + ACG L D+ G +
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSLIS 231
R+ G + E S+++MY F+ A + E + ++ V W +L++
Sbjct: 382 SRDYGIAPSIEDYV-SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 208/381 (54%), Gaps = 8/381 (2%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A FD + K+ W ++I ACS G+ +++ ++ ML+ + FT +
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVIS--ACSRKGHGI-KAIGMFIGMLNHWFLPNEFTVCSI 290
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
LKAC + G +VH LVV +++DV+VG SL+ MY K G++ R VFD M R+
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
+W ++++ + + G +A +F M+R L+ + T++++L ACG + L LGK +H
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
+++NS + N ++ ++++ +YC C A + + L +D VSW ++ISG G
Sbjct: 411 IIKNS--IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM-NTAVGTSL 299
+ L+ +M G P+ T S L AC+ +LL+G S+HS + KK + + N VG++L
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKKNHALSNVFVGSAL 527
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I MYA CG A R F+ +P+K+L SW M+ G+ +G REA+ + M + D+
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 360 GVFTAVLSACSHSGLVDEGKE 380
+F +LS C L DE E
Sbjct: 588 YIFATILSTCGDIEL-DEAVE 607
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 221/432 (51%), Gaps = 9/432 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADN-FTYPFVLK 62
A+ +FD + KN+ W +MI GY + L+ + + G + N + +L
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYL---KYGLEDEAFALFEDYVKHGIRFTNERMFVCLLN 192
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
C E+G +VHG +V G+ ++ V +SL+ Y + G++ +A FD M +D+ S
Sbjct: 193 LCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVIS 251
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
W ++S + G A +F M + + T+ ++L AC + L+ G+ VH VV
Sbjct: 252 WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVV 311
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQV 242
+ + + FV S++DMY C IS RK+F+G++ ++TV+W S+I+ + + G +
Sbjct: 312 KR--MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
+ LF M + + +TV+S+L AC + ALLLG +H+ ++K N +G++L+ +
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 303 YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
Y CG A ++P + + SWT M++G G EA+ EM+ + + P+ +
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
++ L AC++S + G+ I +++ + S L+ + + G + EA+ D+M
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMP 548
Query: 423 LKPNEDVWTALL 434
K N W A++
Sbjct: 549 EK-NLVSWKAMI 559
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 194/366 (53%), Gaps = 10/366 (2%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
R+H + + + +Y GN+LIS ++ GD+ AR VFD MP ++ +W M+ GY+K G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTM-LALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
+AF +F+ + G+ M + LL+ C + +LG+ VHG +V+ N
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG---VGNLI 219
Query: 194 VTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
V +S++ Y C ++ A + F+ + KD +SW ++IS + G + + +F M
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 254 AVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
+P+E TV S+L ACS AL G VHS +VK+ + VGTSL+ MYA CG
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 314 RAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
+ F+ + +++ +WT ++ G G EAIS+F M +++ + ++L AC G
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDV--WT 431
+ GKE+ ++ ++ ++E S LV L + G+ +A+ + + P+ DV WT
Sbjct: 400 ALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQL---PSRDVVSWT 455
Query: 432 ALLSAC 437
A++S C
Sbjct: 456 AMISGC 461
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 262/613 (42%), Gaps = 114/613 (18%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
M +A+ +FD + ++ WN+MI+GY
Sbjct: 185 MEKAKQVFDAMPSRDVVSWNAMIKGY---------------------------------- 210
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
+ G+ L+ D E +V S++ Y ++GD+ A +F +MP R++
Sbjct: 211 --------IENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRS--GLVGDGTTMLALLSACGDL--MDLKLGKA 176
SW M+SG+ N +A ++F M++ + +G T+++L ACG L +LG+
Sbjct: 263 VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQ 322
Query: 177 VHGYVVRN-------SGRLS--------------------NNEF---VTNSMIDMYCNCD 206
+H V+ N GRL+ N F N +I+ Y
Sbjct: 323 LHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNG 382
Query: 207 FISGARKLFEGL-AVKDTVSWNSLISGYEKCG------GAFQVL---------------- 243
+ A LFE + ++ D VSW S+I GY + G G FQ L
Sbjct: 383 DLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLV 442
Query: 244 --ELFGQ-------MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG--YGMN 292
ELF + M G P T +L + S L G +H + K Y +
Sbjct: 443 QNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD 502
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
+ SL+SMYA CG+ A+ F ++ K SW M+ G HG +A+++F EML
Sbjct: 503 LILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
P+ F VLSACSHSGL+ G E+F M Y+++P HY ++DLLGRAGKL
Sbjct: 563 SGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLK 622
Query: 413 EAYATIDNMKLKPNEDVWTALLSACRLHRNVK----LAEISAQKLFEMDPNKVSGYVCLS 468
EA I + P+ V+ ALL C L+ K +AE +A +L E+DP G+V L
Sbjct: 623 EAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALC 682
Query: 469 NIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLK 528
N+YA R P S+ +N + F +GD S ++ + +
Sbjct: 683 NVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPIF 742
Query: 529 DLNEQLKKVGYMP 541
NE L++ P
Sbjct: 743 CGNEMLEEEEEKP 755
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 183/453 (40%), Gaps = 101/453 (22%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ +A+++F+ + +N N+M+ GY N + L+REM + ++ +
Sbjct: 93 LDEARVLFEVMPERNIVTCNAMLTGYVKCRRMN---EAWTLFREM-----PKNVVSWTVM 144
Query: 61 LKA-CGDLLLREMGIRVHGLVVVDGL-ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
L A C D G + + D + E +V N+L++ ++ GDM A+ VFD MP R
Sbjct: 145 LTALCDD------GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR 198
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D+ SWN M+ GY++N +A ++F
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLF----------------------------------- 223
Query: 179 GYVVRNSGRLSNNEFVT-NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG 237
G +S VT SM+ YC + A +LF + ++ VSW ++ISG+
Sbjct: 224 -------GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNE 276
Query: 238 GAFQVLELFGQMF--IGGAVPDEVTVISVLGACSRISALL--LGSSVHSYLVKKGYGM-- 291
+ L LF +M + P+ T+IS+ AC + LG +H+ ++ G+
Sbjct: 277 LYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVD 336
Query: 292 -NTAVGTSLISMYANCGSFLCAHRAFNEIPD---------------------------KS 323
+ + SL+ MYA+ G A NE D KS
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 324 L---ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKE 380
L SWT M+ G+ G A +F ++ K D +T ++S + L E
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAAS 452
Query: 381 IFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDE 413
+ M R ++P + YS L+ G LD+
Sbjct: 453 LLSDMVR-CGLKPLNSTYSVLLSSAGATSNLDQ 484
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 146/337 (43%), Gaps = 60/337 (17%)
Query: 48 FGQKADNF-TYPFVLKACGDLLLREM--GIRVHGLVVVDGLE-----SDVYVGNSLISMY 99
+G K N+ +Y L+LR + G VH ++D + + V SL+S Y
Sbjct: 28 YGDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKY 87
Query: 100 LKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML 159
K G + AR++F+ MP R++ + N M++GYVK +A+ +F M ++ V T ML
Sbjct: 88 AKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKN--VVSWTVML 145
Query: 160 ALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA 219
L C D + RN +S N VT + N D + A+++F+ +
Sbjct: 146 TAL--CDDGRSEDAVELFDEMPERNV--VSWNTLVTG----LIRNGD-MEKAKQVFDAMP 196
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
+D VSWN++I GY + G + LFG M
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEAKLLFGDM------------------------------ 226
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
N TS++ Y G A+R F E+P++++ SWT M++GF +
Sbjct: 227 ---------SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 340 GREAISIFNEMLG--KNITPDEGVFTAVLSACSHSGL 374
REA+ +F EM ++P+ ++ AC G+
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 231/469 (49%), Gaps = 42/469 (8%)
Query: 107 TARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACG 166
A VFD++P D+ S ++ +VK +A F + G+ + T ++ +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 167 DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARK------------- 213
D+KLGK +H Y ++ L++N FV +++++ Y ++ AR+
Sbjct: 105 TSRDVKLGKQLHCYALKMG--LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 214 ------------------LFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
LF + + V+WN++I G+ + G + + F M G V
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 256 -PDEVTVISVLGACSRISALLLGSSVHSYLVK-KGYGMNTAVGTSLISMYANCGSFLCAH 313
P+E T + A S I++ G S+H+ +K G N V SLIS Y+ CG+ +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 314 RAFNEIPD--KSLASWTVMVTGFGIHGKGREAISIFNEMLG-KNITPDEGVFTAVLSACS 370
AFN++ + +++ SW M+ G+ +G+G EA+++F +M+ N+ P+ VL AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTT---THYSCLVDLLGRAGKLDEAYATIDNMKLKPNE 427
H+GL+ EG F K DY+ +P HY+C+VD+L R+G+ EA I +M L P
Sbjct: 343 HAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXX 487
W ALL C++H N +LA+++A K+ E+DP VS YV LSN Y+A + W
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 488 XXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKK 536
S+ E+ + F D +++ D++Y L +++ L++
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 62/352 (17%)
Query: 42 YREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLK 101
++ +L G + + FT+ V+ + ++G ++H + GL S+V+VG+++++ Y+K
Sbjct: 81 FKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVK 140
Query: 102 FGDMGTARLVFDK-------------------------------MPVRDLTSWNTMMSGY 130
+ AR FD MP R + +WN ++ G+
Sbjct: 141 LSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGF 200
Query: 131 VKNGEAGDAFVVFDHMRRSGLV-GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
+ G +A F M R G+V + +T ++A ++ GK++H ++ G+
Sbjct: 201 SQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGK-R 259
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGL--AVKDTVSWNSLISGYEKCGGAFQVLELFG 247
N FV NS+I Y C + + F L ++ VSWNS+I GY G + + +F
Sbjct: 260 FNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFE 319
Query: 248 QMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYG-MNTAVG--------- 296
+M + P+ VT++ VL AC+ H+ L+++GY N AV
Sbjct: 320 KMVKDTNLRPNNVTILGVLFACN-----------HAGLIQEGYMYFNKAVNDYDDPNLLE 368
Query: 297 ----TSLISMYANCGSFLCAHRAFNEIP-DKSLASWTVMVTGFGIHGKGREA 343
++ M + G F A +P D + W ++ G IH R A
Sbjct: 369 LEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLA 420
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 19/286 (6%)
Query: 189 SNNEFVT---NSMIDM--YCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
S N VT NS+ ++ + + D I A K+F+ + D +S ++I + K +
Sbjct: 19 SANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEAS 78
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+ F ++ G P+E T +V+G+ + + LG +H Y +K G N VG+++++ Y
Sbjct: 79 QAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCY 138
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
+ A R F++ D ++ S T +++G+ + EA+S+F M P+ V T
Sbjct: 139 VKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAM------PERSVVT 192
Query: 364 --AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR-----AGKLDEAYA 416
AV+ S +G +E F M R+ V P + + C + + AGK A A
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 417 TIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVS 462
I + + N VW +L+S N++ + ++ KL E N VS
Sbjct: 253 -IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVS 297
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 238/478 (49%), Gaps = 21/478 (4%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV--LKAC 64
+FD++ ++ WN+MI G R ++ +M + + FT+ + L C
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIR---VFFDMQRWEIRPTEFTFSILASLVTC 148
Query: 65 GDLLLREMGIRVHGLVVVDGLES-DVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
+R G ++HG + G+ ++ V NS++ MY + G A VF M RD+ SW
Sbjct: 149 ----VRH-GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N ++ +G A F MR + D T+ ++S C DL +L GK ++
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK 263
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYE-KCGGAFQV 242
G LSN+ V + IDM+ C+ + + KLF L D+V NS+I Y C G
Sbjct: 264 -MGFLSNS-IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE-DA 320
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLL--GSSVHSYLVKKGYGMNTAVGTSLI 300
L LF PD+ T SVL S ++A++L G+ VHS ++K G+ ++TAV TSL+
Sbjct: 321 LRLFILAMTQSVRPDKFTFSSVL---SSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLM 377
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML-GKNITPDE 359
MY GS A F + K L W ++ G + + E+++IFN++L +++ PD
Sbjct: 378 EMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDR 437
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+L AC ++G V+EG +IF M + + V P HY+C+++LL R G ++EA D
Sbjct: 438 VTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIAD 497
Query: 420 NMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ +P+ +W +L A + +LAE A+ + E +P Y+ L IY RW
Sbjct: 498 KIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRW 555
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 182/422 (43%), Gaps = 43/422 (10%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
VH ++ G Y GN + +Y K G + A +FD +P ++ +WN + G KNG
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACG----------DLMDLKL------------ 173
+A +FD M +V TM++ L +CG D+ ++
Sbjct: 86 LNNALDLFDEMPERDVVS-WNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILAS 144
Query: 174 -------GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
G+ +HG + SG N V NS++DMY A +F + +D VSW
Sbjct: 145 LVTCVRHGEQIHGNAI-CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVK 286
N LI G L+ F M PDE TV V+ CS + L G + +K
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK 263
Query: 287 KGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
G+ N+ V + I M++ C + + F E+ M+ + H G +A+ +
Sbjct: 264 MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRL 323
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
F + +++ PD+ F++VLS+ ++ ++D G ++ + + + T + L+++
Sbjct: 324 FILAMTQSVRPDKFTFSSVLSSM-NAVMLDHGADV-HSLVIKLGFDLDTAVATSLMEMYF 381
Query: 407 RAGKLDEA---YATIDNMKLKPNEDVW-TALLSACRLHRNVKLAEISAQKLF--EMDPNK 460
+ G +D A +A D L W T ++ R R V+ I Q L + P++
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLI----FWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDR 437
Query: 461 VS 462
V+
Sbjct: 438 VT 439
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFG 335
L VH+ L++ G+ T G + +Y GS + A + F++IPDK+ +W V + G
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
+G A+ +F+EM +++ + ++S G + G +F+ M R + + PT
Sbjct: 82 KNGYLNNALDLFDEMPERDVVS----WNTMISGLVSCGFHEYGIRVFFDMQR-WEIRPTE 136
Query: 396 THYSCLVDLLG--RAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKL 453
+S L L+ R G+ A + + N VW +++ ++R + + + +
Sbjct: 137 FTFSILASLVTCVRHGEQIHGNAICSGVS-RYNLVVWNSVMD---MYRRLGVFDYALSVF 192
Query: 454 FEMDPNKVSGYVCL 467
M+ V + CL
Sbjct: 193 LTMEDRDVVSWNCL 206
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 219/478 (45%), Gaps = 76/478 (15%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +F I ++F +N++IR C+ SS S + EM D T+PFV KA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIR--ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKA 124
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C + +G D+ + +L L+FG + DL +
Sbjct: 125 CA--------AKKNG---------DLTLVKTLHCQALRFGLLS------------DLFTL 155
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
NT++ Y +++A + + L D + V Y
Sbjct: 156 NTLIRVY--------------------------SLIAPIDSALQLFDENPQRDVVTY--- 186
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVL 243
N +ID I AR+LF+ + ++D VSWNSLISGY + + +
Sbjct: 187 ------------NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+LF +M G PD V ++S L AC++ G ++H Y +K +++ + T L+ Y
Sbjct: 235 KLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
Query: 304 ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A CG A F DK+L +W M+TG +HG G + F +M+ I PD F
Sbjct: 295 AKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI 354
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM-K 422
+VL CSHSGLVDE + +F +M Y+V HY C+ DLLGRAG ++EA I+ M K
Sbjct: 355 SVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPK 414
Query: 423 LKPNED---VWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
N + W+ LL CR+H N+++AE +A ++ + P Y + +YA +RW
Sbjct: 415 DGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERW 472
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A+ +FD + ++ WNS+I GY A N ++ L+ EM++ G K DN L
Sbjct: 201 RARELFDSMPLRDLVSWNSLISGY---AQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 63 ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTS 122
AC + G +H L D ++ L+ Y K G + TA +F+ + L +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFT 317
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSAC 165
WN M++G +G F M SG+ DG T +++L C
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGC 360
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 199/373 (53%), Gaps = 4/373 (1%)
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
++R G D + + + +CG D + G H ++ G ++ ++ +S++ +Y +
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALK--GGFISDVYLGSSLVVLYRDS 168
Query: 206 DFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
+ A K+FE + ++ VSW ++ISG+ + L+L+ +M + P++ T ++L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA 325
AC+ AL G SVH + G + SLISMY CG A R F++ +K +
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 326 SWTVMVTGFGIHGKGREAISIFNEMLGKNIT-PDEGVFTAVLSACSHSGLVDEGKEIFYK 384
SW M+ G+ HG +AI +F M+ K+ T PD + VLS+C H+GLV EG++ F+
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK-FFN 347
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVK 444
+ ++ ++P HYSCLVDLLGR G L EA I+NM +KPN +W +LL +CR+H +V
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 445 LAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELN 504
+A++ ++P+ + +V L+N+YA+ W P S+ E+N
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 505 KMVHQFFAGDTSH 517
V F A D S+
Sbjct: 468 NYVFMFKAEDGSN 480
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 145/312 (46%), Gaps = 6/312 (1%)
Query: 49 GQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA 108
G D + +++CG G H L + G SDVY+G+SL+ +Y G++ A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 109 RLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDL 168
VF++MP R++ SW M+SG+ + ++ MR+S + T ALLSAC
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 169 MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNS 228
L G++VH + L + ++NS+I MYC C + A ++F+ + KD VSWNS
Sbjct: 235 GALGQGRSVHCQTLHMG--LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 229 LISGYEKCGGAFQVLELFGQMFI-GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKK 287
+I+GY + G A Q +ELF M G PD +T + VL +C + G + + +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 288 GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS-WTVMVTGFGIHGKGREAISI 346
G + L+ + G A +P K + W ++ +HG I
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRA 412
Query: 347 FNEMLGKNITPD 358
E L + PD
Sbjct: 413 AEERL--MLEPD 422
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A +F+++ +N W +MI G+A + L LY +M +++T+ +
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDIC---LKLYSKMRKSTSDPNDYTFTAL 227
Query: 61 LKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
L AC G VH + GL+S +++ NSLISMY K GD+ A +FD+ +D+
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFD-HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHG 179
SWN+M++GY ++G A A +F+ M +SG D T L +LS+C +K G+
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 180 YVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLI 230
+ + + N + + ++D+ + A +L E + +K ++V W SL+
Sbjct: 348 LMAEHGLKPELNHY--SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 213/408 (52%), Gaps = 17/408 (4%)
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSG--LVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
N + Y+++GE A + F H R V + + A+ + G+ +H +
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHA-L 90
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGAF 240
VR G + + T S++ Y + + AR++F+ K + V W ++IS Y + +
Sbjct: 91 VRKLGFNAVIQIQT-SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG--YGMNTAVGTS 298
+ +ELF +M D V V L AC+ + A+ +G ++S +K+ M+ + S
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 299 LISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN---- 354
L++MY G A + F+E K + ++T M+ G+ ++G+ +E++ +F +M +
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 355 --ITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
ITP++ F VL ACSHSGLV+EGK F M DYN++P H+ C+VDL R+G L
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 413 EAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYA 472
+A+ I+ M +KPN +W LL AC LH NV+L E +++FE+D + V YV LSNIYA
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 473 AEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAG-DTSHQQ 519
++ W P S+ EL ++++F +G D + +Q
Sbjct: 390 SKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEFVSGPDNNDEQ 434
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 178/392 (45%), Gaps = 52/392 (13%)
Query: 42 YREMLSFGQKADNFTYPFVLKACGDLLLREM-GIRVHGLVVVDGLESDVYVGNSLISMYL 100
+R+ SF D+F+ F +K + G ++H LV G + + + SL+ Y
Sbjct: 55 FRQSPSF---VDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYS 111
Query: 101 KFGDMGTARLVFDKMPVR-DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML 159
GD+ AR VFD+ P + ++ W M+S Y +N + +A +F M + DG +
Sbjct: 112 SVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVT 171
Query: 160 ALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA 219
LSAC DL +++G+ ++ ++ RL+ + + NS+++MY ARKLF+
Sbjct: 172 VALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESM 231
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGA------VPDEVTVISVLGACSRISA 273
KD ++ S+I GY G A + LELF +M P++VT I VL ACS
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS---- 287
Query: 274 LLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTG 333
HS LV++G SM + +N P + A + MV
Sbjct: 288 -------HSGLVEEG-------KRHFKSMIMD----------YNLKPRE--AHFGCMVDL 321
Query: 334 FGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEI---FYKMTRDYN 390
F G ++A N+M I P+ ++ +L ACS G V+ G+E+ +++ RD+
Sbjct: 322 FCRSGHLKDAHEFINQM---PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDH- 377
Query: 391 VEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
Y L ++ G DE D ++
Sbjct: 378 ----VGDYVALSNIYASKGMWDEKSKMRDRVR 405
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 4 AQLIFDQIVFK-NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
A+ +FD+ K N LW +MI Y +S ++ L++ M + + D L
Sbjct: 119 ARQVFDETPEKQNIVLWTAMISAYT---ENENSVEAIELFKRMEAEKIELDGVIVTVALS 175
Query: 63 ACGDLLLREMGIRVHGLVVVDG--LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL 120
AC DL +MG ++ + L D+ + NSL++MY+K G+ AR +FD+ +D+
Sbjct: 176 ACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDV 235
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRR------SGLVGDGTTMLALLSACGDLMDLKLG 174
T++ +M+ GY NG+A ++ +F M+ + + + T + +L AC ++ G
Sbjct: 236 TTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEG 295
Query: 175 KAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLI 230
K ++ + L E M+D++C + A + + +K +TV W +L+
Sbjct: 296 KRHFKSMIMDYN-LKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLL 351
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 197/383 (51%), Gaps = 26/383 (6%)
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
G V D + + C AL VH ++ + + S+I MY+ CGS A
Sbjct: 176 GYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDA 235
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
FN +P+++L +W ++ F +G+G +AI F+ + PD +F + AC
Sbjct: 236 LTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVL 295
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
G ++EG F M ++Y + P HY LV +L G LDEA +++M+ PN D+W
Sbjct: 296 GDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESME--PNVDLWET 353
Query: 433 LLSACRLHRNVKLAEISAQKLFEMDPNKV-----SGYVCLSNIYAAEKRWXXXXXXXXXX 487
L++ R+H ++ L + + ++D +++ +G V + + +++
Sbjct: 354 LMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKG---- 409
Query: 488 XXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVL 547
P+Y + AGD S ++ ++Y LK L E + ++GY+P + L
Sbjct: 410 --------PNYG-------IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLAL 454
Query: 548 YDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMKMVSKLMSRE 607
+DV+ E K++ L++H+ER A ++T + IR+ KNLRVC DCH +K++SK++ RE
Sbjct: 455 HDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRE 514
Query: 608 IIMRDICRFHHFRDGICSCGGYW 630
+I RD RFHH +DG+CSC YW
Sbjct: 515 LISRDAKRFHHMKDGVCSCREYW 537
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%)
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR 118
++ + CGD + VH + SD+ NS+I MY G + A VF+ MP R
Sbjct: 186 WIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLG 174
+L +W ++ + KNG+ DA F ++ G DG + ACG L D+ G
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+ G+ A + R G V D + + CGD L+ K VH ++ + G +
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
+ NS+I+MY C + A +F + ++ +W +I + K G ++ F +
Sbjct: 218 AY--NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TSLISMYANCGSF 309
G PD + AC + + G +H + K YG+ + SL+ M A G
Sbjct: 276 EGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 310 LCAHRAFNEIPDKSLASWTVMVTGFGIHG 338
A R F E + ++ W ++ +HG
Sbjct: 335 DEALR-FVESMEPNVDLWETLMNLSRVHG 362
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 186/353 (52%), Gaps = 41/353 (11%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDH 145
E+DV +I+ + K D+ AR FD+MP + + SWN M+SGY +NG DA +F+
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M R G+ + TT + ++SAC D L +++ + RL N FV +++DM+ C
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL--NCFVKTALLDMHAKC 312
Query: 206 DFI--------------------------------SGARKLFEGLAVKDTVSWNSLISGY 233
I S AR+LF+ + ++ VSWNSLI+GY
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 234 EKCGGAFQVLELFGQMF-IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
G A +E F M G + PDEVT+ISVL AC ++ L LG + Y+ K +N
Sbjct: 373 AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLN 432
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLG 352
+ SLI MYA G+ A R F+E+ ++ + S+ + T F +G G E +++ ++M
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLL 405
+ I PD +T+VL+AC+ +GL+ EG+ IF K R+ P HY+C+ DLL
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIF-KSIRN----PLADHYACM-DLL 539
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 190/451 (42%), Gaps = 83/451 (18%)
Query: 5 QLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC 64
+LIFD + F N F+ NSM + ++ N R LY + G D F++P V+K+
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLR---LYEQRSRCGIMPDAFSFPVVIKSA 116
Query: 65 GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWN 124
G GI LV G D YV N ++ MY+K + +AR VFD++ R + WN
Sbjct: 117 G-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 125 TMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRN 184
M+SGY K G +A +FD M + +V T M+ + DL
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVVS-WTVMITGFAKVKDL---------------- 214
Query: 185 SGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLE 244
ARK F+ + K VSWN+++SGY + G L
Sbjct: 215 ------------------------ENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALR 250
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
LF M G P+E T + V+ ACS + L S+ + +K +N V T+L+ M+A
Sbjct: 251 LFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHA 310
Query: 305 NCGSFLCAHRAFNEI--------------------------------PDKSLASWTVMVT 332
C A R FNE+ P +++ SW ++
Sbjct: 311 KCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIA 370
Query: 333 GFGIHGKGREAISIFNEMLGK-NITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
G+ +G+ AI F +M+ + PDE +VLSAC H ++ G + R +
Sbjct: 371 GYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG-DCIVDYIRKNQI 429
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
+ + Y L+ + R G L EA D MK
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 160/313 (51%), Gaps = 38/313 (12%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A+ FD++ K+ WN+M+ GYA + + R L+ +ML G + + T+ V
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALR---LFNDMLRLGVRPNETTWVIV 270
Query: 61 LKACGDL-----------LLREMGIRVHGLV---VVD------------------GLESD 88
+ AC L+ E +R++ V ++D G + +
Sbjct: 271 ISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRN 330
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRR 148
+ N++IS Y + GDM +AR +FD MP R++ SWN++++GY NG+A A F+ M
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 149 SG-LVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDF 207
G D TM+++LSACG + DL+LG + Y+ +N +L+++ + S+I MY
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY--RSLIFMYARGGN 448
Query: 208 ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGA 267
+ A+++F+ + +D VS+N+L + + G + L L +M G PD VT SVL A
Sbjct: 449 LWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Query: 268 CSRISALLLGSSV 280
C+R L G +
Sbjct: 509 CNRAGLLKEGQRI 521
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 165/389 (42%), Gaps = 55/389 (14%)
Query: 75 RVHG-LVVVDGLESDVYVGNSLISMYLKF-GDMGTARLVFDKMPVRDLTSWNTMMSGYVK 132
++H L+V + L Y + +IS + RL+FD + ++ N+M + K
Sbjct: 24 QIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSK 83
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
A D +++ R G++ D + ++ + G + G V + +
Sbjct: 84 MDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLG--FFKDP 136
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+V N ++DMY + + ARK+F+ ++ + WN +ISGY K G + +LF M
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM--- 193
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
E V+S T +I+ +A A
Sbjct: 194 ----PENDVVS--------------------------------WTVMITGFAKVKDLENA 217
Query: 313 HRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
+ F+ +P+KS+ SW M++G+ +G +A+ +FN+ML + P+E + V+SACS
Sbjct: 218 RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
+ + K+ + V + L+D+ + + A + + + N W A
Sbjct: 278 ADPSLTRSLV-KLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 433 LLSACRLHRNVKLAEI-SAQKLFEMDPNK 460
++S ++ ++ SA++LF+ P +
Sbjct: 337 MISGY-----TRIGDMSSARQLFDTMPKR 360
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 185/346 (53%), Gaps = 17/346 (4%)
Query: 171 LKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLI 230
L++G+ VHG +V+ G L +E + +++ Y + ARK+F+ + + +V+WN++I
Sbjct: 127 LRVGRIVHG-MVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 231 SGY--EKCGG---AFQVLELFGQMFI--GGAVPDEVTVISVLGACSRISALLLGSSVHSY 283
GY K G A + + LF + G P + T++ VL A S+ L +GS VH Y
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 284 LVKKGYG--MNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGR 341
+ K G+ ++ +GT+L+ MY+ CG A F + K++ +WT M TG ++G+G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 342 EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCL 401
E ++ N M I P+E FT++LSA H GLV+EG E+F M + V P HY C+
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 402 VDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM--DPN 459
VDLLG+AG++ EAY I M +KP+ + +L +AC ++ + E + L E+ +
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDE 425
Query: 460 KVSG-----YVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSF 500
K+SG YV LSN+ A + +W P YSF
Sbjct: 426 KLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSF 471
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACS---AGGNSSSRSLVLYREMLSFGQ--KADNFTYP 58
A+ +FD++ + S WN+MI GY CS G +++ +++VL+R G + + T
Sbjct: 166 ARKVFDEMPERTSVTWNAMIGGY-CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMV 224
Query: 59 FVLKACGDLLLREMGIRVHGLVVVDGL--ESDVYVGNSLISMYLKFGDMGTARLVFDKMP 116
VL A L E+G VHG + G E DV++G +L+ MY K G + A VF+ M
Sbjct: 225 CVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMK 284
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
V+++ +W +M +G NG + + + M SG+ + T +LLSA
Sbjct: 285 VKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 231/500 (46%), Gaps = 67/500 (13%)
Query: 44 EMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFG 103
E+++ G+K D +L+ G+ + ++HG V G S+ + NSL+ Y
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 104 DMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLS 163
+ A VFD+MP D+ SWN+++SGYV++G + +F + RS + + + A L+
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 164 ACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDT 223
AC L LG +H +V+ G N V N +IDMY C F+ A +F+ + KDT
Sbjct: 165 ACARLHLSPLGACIHSKLVK-LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 224 VSWNSLISGYEKCG----------------------------------GAFQVL------ 243
VSWN++++ + G AFQVL
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP 283
Query: 244 ----------------------ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
E F +M G DE ++ VL A + ++ + GS +H
Sbjct: 284 NSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIH 343
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGR 341
+ K G V ++LI MY+ CG A F +P K+L W M++G+ +G
Sbjct: 344 ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI 403
Query: 342 EAISIFNEMLGKN-ITPDEGVFTAVLSACSHSGLVDEGKEIFYK-MTRDYNVEPTTTHYS 399
EAI +FN++ + + PD F +L+ CSH + E +++ M +Y ++P+ H
Sbjct: 404 EAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC 463
Query: 400 CLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEM-DP 458
L+ +G+ G++ +A I + W ALL AC +++K A+ A K+ E+ D
Sbjct: 464 SLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDA 523
Query: 459 NKVSG-YVCLSNIYAAEKRW 477
+K Y+ +SN+YA +RW
Sbjct: 524 DKDEYLYIVMSNLYAYHERW 543
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 143/316 (45%), Gaps = 45/316 (14%)
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY 180
SW+T++ + G G + + G D + ++ LL G+ + L + +HGY
Sbjct: 22 NSWSTIVPALARFGSIGVLRAAVE-LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 181 VVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAF 240
V ++ G +SN ++NS++ Y D + A K+F+ + D +SWNSL+SGY + G
Sbjct: 81 VTKH-GFVSNTR-LSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM-NTAVGTSL 299
+ + LF ++ P+E + + L AC+R+ LG+ +HS LVK G N VG L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 300 ISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
I MY CG A F + +K SW
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSW-------------------------------- 226
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
A++++CS +G ++ G F++M P T Y+ L+D ++G + A+ +
Sbjct: 227 ---NAIVASCSRNGKLELGLWFFHQMP-----NPDTVTYNELIDAFVKSGDFNNAFQVLS 278
Query: 420 NMKLKPNEDVWTALLS 435
+M PN W +L+
Sbjct: 279 DMP-NPNSSSWNTILT 293
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Query: 225 SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYL 284
SW++++ + G + VL ++ G PD ++ +L + L +H Y+
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 285 VKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAI 344
K G+ NT + SL+ Y S AH+ F+E+PD + SW +V+G+ G+ +E I
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 345 SIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDL 404
+F E+ ++ P+E FTA L+AC+ L G I K+ + + +CL+D+
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 405 LGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKL 445
G+ G +D+A +M+ K W A++++C RN KL
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCS--RNGKL 239
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 194/385 (50%), Gaps = 35/385 (9%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
++H ++ L +D + LIS+ FG+ A LVF+++ +WN M+ N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 135 EAGDAFVVFDHMRRSGLVG-DGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEF 193
+ +A ++F M S D T ++ AC ++LG VHG ++ N+ F
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIK--AGFFNDVF 155
Query: 194 VTNSMIDMYCNCDFISGARKLFEG-------------------------------LAVKD 222
N+++D+Y C RK+F+ + +++
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN 215
Query: 223 TVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
VSW ++I+ Y K + +LF +M + P+E T++++L A +++ +L +G VH
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 283 YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGRE 342
Y K G+ ++ +GT+LI MY+ CGS A + F+ + KSLA+W M+T G+HG G E
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 343 AISIF-NEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCL 401
A+S+F ++ PD F VLSAC+++G V +G F +M + Y + P H +C+
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395
Query: 402 VDLLGRAGKLDEAYATIDNMKLKPN 426
+ LL +A ++++A +++M P+
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDPD 420
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 146/298 (48%), Gaps = 36/298 (12%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A L+F+Q+ ++F WN MIR + S L+ M+S + D FT+PFV+KA
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIR--SLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKA 128
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
C +G +VHGL + G +DV+ N+L+ +Y K G + R VFDKMP R + SW
Sbjct: 129 CLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSW 188
Query: 124 NTMMSG-------------------------------YVKNGEAGDAFVVFDHMRRSGLV 152
TM+ G YVKN +AF +F M+ +
Sbjct: 189 TTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK 248
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
+ T++ LL A L L +G+ VH Y +N L + F+ ++IDMY C + AR
Sbjct: 249 PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL--DCFLGTALIDMYSKCGSLQDAR 306
Query: 213 KLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV-PDEVTVISVLGACS 269
K+F+ + K +WNS+I+ G + L LF +M +V PD +T + VL AC+
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 161 LLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV 220
L C + LK +H +++++ L+N++ + +I + + A +F L
Sbjct: 26 FLRTCSNFSQLK---QIHTKIIKHN--LTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 221 KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP-DEVTVISVLGACSRISALLLGSS 279
T +WN +I + L LF M I D+ T V+ AC S++ LG+
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGK 339
VH +K G+ + +L+ +Y CG + F+++P +S+ SWT M+ G + +
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 340 GREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYS 399
A +FN+M +N+ +TA+++A + DE ++F +M D +V+P
Sbjct: 201 LDSAEIVFNQMPMRNVVS----WTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEF--- 252
Query: 400 CLVDLLGRAGKL 411
+V+LL + +L
Sbjct: 253 TIVNLLQASTQL 264
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A+++F+Q+ +N W +MI Y + L+R M K + FT +L+A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYV---KNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
L MG VH +G D ++G +LI MY K G + AR VFD M + L +W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLV-GDGTTMLALLSACGDLMDLKLG 174
N+M++ +G +A +F+ M V D T + +LSAC + ++K G
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 212/477 (44%), Gaps = 91/477 (19%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREM-----LSFGQKA----DNFTYPFVLKACGDL 67
FL+N ++R C + G + + LY ++ LS K+ D+FTY F+LKA +
Sbjct: 78 FLFNPLLR---CYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNP 134
Query: 68 LLREMGIRVHGLVVVD--GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNT 125
+ + + + G ES VYV +L+ M
Sbjct: 135 RFPSLLLGIGLHGLTLKLGFESHVYVQTALVGM--------------------------- 167
Query: 126 MMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
Y+ G DA VFD M
Sbjct: 168 ----YLVGGNMIDAHKVFDEMP-------------------------------------- 185
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
N N MI N A E + + VSW ++I GY + + + L
Sbjct: 186 ---ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILL 242
Query: 246 FGQMFIGGAV-PDEVTVISVLGACSRISALLLGSSVHSYLVKKGY-GMNTAVGTSLISMY 303
F +M A+ P+E+T++++L A + L + SVH+Y+ K+G+ + V SLI Y
Sbjct: 243 FSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAY 302
Query: 304 ANCGSFLCAHRAFNEIPD--KSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
A CG A + F EIP+ K+L SWT M++ F IHG G+EA+S+F +M + P+
Sbjct: 303 AKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT 362
Query: 362 FTAVLSACSHSGLVDEG-KEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
+VL+ACSH GL +E E F M +Y + P HY CLVD+L R G+L+EA
Sbjct: 363 MISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALE 422
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSNIYAAEKRW 477
+ ++ VW LL AC ++ + +LAE +KL E++ + YV +SNI+ R+
Sbjct: 423 IPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRF 479
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 194/413 (46%), Gaps = 38/413 (9%)
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVV 182
+NT++ Y+ GE + +F HM S + + T +L+ A + G A+HG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 183 RNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF--------------------------- 215
+ G L + FV S + Y + +RK+F
Sbjct: 114 KR-GFLWD-PFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 216 ----EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGG---AVPDEVTVISVLGAC 268
+ + V D VSW ++I+G+ K G + L +FG+M P+E T +SVL +C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 269 SRIS--ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
+ + LG +H Y++ K + T +GT+L+ MY G A F++I DK + +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
W +++ +G+ ++A+ +F M + P+ A+L+AC+ S LVD G ++F +
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLA 446
+Y + PT+ HY C+VDL+GRAG L +A I ++ +P+ V ALL AC++H N +L
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 447 EISAQKLFEMDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYS 499
++L + P YV LS A + W P+YS
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 41/306 (13%)
Query: 13 FKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREM 72
+K ++N++IR Y + SL L+ ML+ + +N T+P ++KA
Sbjct: 48 WKTKCVYNTLIRSYLTTG---EYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY 104
Query: 73 GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFD------------------- 113
G+ +HG + G D +V S + Y + GD+ ++R +FD
Sbjct: 105 GVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR 164
Query: 114 ------------KMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM---RRSGLVGDGTTM 158
+MPV D+ SW T+++G+ K G A +VF M R+ + + T
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF 224
Query: 159 LALLSACG--DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
+++LS+C D ++LGK +HGYV+ S + + +++DMY + A +F+
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGYVM--SKEIILTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 217 GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLL 276
+ K +WN++IS G Q LE+F M P+ +T++++L AC+R + L
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 277 GSSVHS 282
G + S
Sbjct: 343 GIQLFS 348
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 8 FDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKA----DNFTYPFVLKA 63
F ++ + W ++I G++ +++L+++ EM+ ++A + T+ VL +
Sbjct: 175 FQRMPVTDVVSWTTVINGFS---KKGLHAKALMVFGEMIQ-NERAVITPNEATFVSVLSS 230
Query: 64 CGDLLLREMGIR----VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
C + + GIR +HG V+ + +G +L+ MY K GD+ A +FD++ +
Sbjct: 231 CANF--DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACG--DLMDL 171
+ +WN ++S NG A +F+ M+ S + +G T+LA+L+AC L+DL
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 199/415 (47%), Gaps = 19/415 (4%)
Query: 219 AVKDTVSWNSLISGYEKC---GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
V +V+ N I ++ G + +E+ + G D + ++ + C + AL
Sbjct: 77 TVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALE 136
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFG 335
VH ++ + ++I MY+ C S A + F E+P+ + + VM+ F
Sbjct: 137 AARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFV 196
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
+G G EAI +F + P+ +F V S C+ +G V EG F M R+Y + P+
Sbjct: 197 NNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSM 256
Query: 396 THYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFE 455
HY + +L +G LDEA ++ M ++P+ DVW L++ R+H +V+L + A+ + +
Sbjct: 257 EHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK 316
Query: 456 MDPNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDT 515
+D ++ V + + A + P YS F D+
Sbjct: 317 LDATRLDK-VSSAGLVATK------ASDFVKKEPSTRSEPYFYSTFR---------PVDS 360
Query: 516 SHQQSDDIYAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINT 575
SH Q + IY L L QLK++GY+PDT + A ++ ++ + E +A+ +L+ +
Sbjct: 361 SHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKS 420
Query: 576 GPGTTIRITKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
P + I + N+R+ DCH +MK++S + R++I RD +H F++G+C C W
Sbjct: 421 KPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 197/476 (41%), Gaps = 44/476 (9%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNG 134
+VH ++ G D L+ +FGD ++ + L N + Y+ +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRS--IGKLYCANPVFKAYLVSS 97
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
A + + R G V D T ++L+S + GK HG +++ V
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG--CDQVLPV 155
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNS-------------------------- 228
NS++ MY C + A+KLF + +D VSWNS
Sbjct: 156 QNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNI 215
Query: 229 -----LISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSY 283
+IS Y + LF +M G +E T++ +L AC R + L G SVH+
Sbjct: 216 ISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHAS 275
Query: 284 LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREA 343
L++ + + T+LI MY C A R F+ + ++ +W VM+ +HG+
Sbjct: 276 LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGG 335
Query: 344 ISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVD 403
+ +F M+ + PDE F VL C+ +GLV +G+ + M ++ ++P H C+ +
Sbjct: 336 LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 404 LLGRAGKLDEAYATIDNMKLKPNEDV------WTALLSACRLHRNVKLAEISAQKLFEMD 457
L AG +EA + N+ P+EDV W LLS+ R N L E A+ L E D
Sbjct: 396 LYSSAGFPEEAEEALKNL---PDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETD 452
Query: 458 PNKVSGYVCLSNIYAAEKRWXXXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAG 513
P Y L NIY+ RW P +L ++VH G
Sbjct: 453 PLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 39/339 (11%)
Query: 20 NSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGL 79
N + + Y S+ S ++L Y ++L FG D++T+ ++ + G HG
Sbjct: 87 NPVFKAYLVSS---SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDA 139
+ G + + V NSL+ MY G + A+ +F ++P RD+ SWN++++G V+NG+ A
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 140 FVVFDHMR-------------------------------RSGLVGDGTTMLALLSACGDL 168
+FD M R+G G+ +T++ LL+ACG
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 169 MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNS 228
LK G++VH ++R L+++ + ++IDMY C + AR++F+ L++++ V+WN
Sbjct: 264 ARLKEGRSVHASLIRTF--LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 229 LISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
+I + G LELF M G PDEVT + VL C+R + G S +S +V +
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE- 380
Query: 289 YGMNTAVGTS--LISMYANCGSFLCAHRAFNEIPDKSLA 325
+ + G + ++Y++ G A A +PD+ +
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 8/232 (3%)
Query: 4 AQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA 63
A +FD++ KN WN MI Y G N+ S+ L+REM+ G + + T +L A
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYL---GANNPGVSISLFREMVRAGFQGNESTLVLLLNA 259
Query: 64 CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSW 123
CG + G VH ++ L S V + +LI MY K ++G AR +FD + +R+ +W
Sbjct: 260 CGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTW 319
Query: 124 NTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVR 183
N M+ + +G +F+ M L D T + +L C + G++ + +V
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV- 378
Query: 184 NSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD----TVSWNSLIS 231
+ ++ N M ++Y + F A + + L +D + W +L+S
Sbjct: 379 DEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 19/392 (4%)
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ LE+ + G + D ++ + C + AL VH + ++ ++I
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVI 150
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
MY+ C S A FNE+P ++ +W M+ +G+G AI +F + + PD+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
+F AV AC G ++EG F M RDY + + Y ++++L G LDEA ++
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 421 MKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYVCLSN--IYAAEKRWX 478
M ++P+ ++W L++ C + ++L + A+ + ++D +++S SN + AA+
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE---SNAGLVAAKASDS 327
Query: 479 XXXXXXXXXXXXXXXXPPSYSFFELNKMVHQFFAGDTSHQQSDDIYAKLKDLNEQLKKVG 538
P K +H+F AGDTSH + + + L Q+ +G
Sbjct: 328 AMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGT---VSAFRSLKVQMLDIG 377
Query: 539 YMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCVDCHTVMK 598
++P T VE E KE+ L S +LA A A+IN+ + + +N+R C+D H K
Sbjct: 378 FVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFK 437
Query: 599 MVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
M+S + R +I RD ++H +++G+CSC YW
Sbjct: 438 MISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 132 KNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
K + +A V D + G + D +L L CG++ L+ + VH + R
Sbjct: 89 KQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDAR---- 144
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
+++I+MY C A +F + +++ +W ++I K G + +++F +
Sbjct: 145 --SYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIE 202
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG--TSLISMYANCG 307
G PD+ +V AC I + G +H + + YGM ++ ++I M A CG
Sbjct: 203 EGNKPDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACG 259
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 57 YPFVL---KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFD 113
+P +L K CG++ E VH + L++ Y +++I MY A VF+
Sbjct: 112 FPRLLGLAKLCGEVEALEEARVVHDCIT--PLDARSY--HTVIEMYSGCRSTDDALNVFN 167
Query: 114 KMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKL 173
+MP R+ +W TM+ KNGE A +F G D A+ AC + D+
Sbjct: 168 EMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINE 227
Query: 174 GKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSL--- 229
G + R+ G + + E N +I+M C + A E + V+ +V W +L
Sbjct: 228 GLLHFESMYRDYGMVLSMEDYVN-VIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNL 286
Query: 230 --ISGYEKCGGAFQVL 243
+ GY + G F L
Sbjct: 287 CWVQGYLELGDRFAEL 302
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 82/107 (76%)
Query: 524 YAKLKDLNEQLKKVGYMPDTSSVLYDVEAEVKEKMLWDHSERLALAFALINTGPGTTIRI 583
Y KLK L ++++ GY+P+T VL+D++ E KEK L HSERLA+AF +INT PGTTIR+
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 584 TKNLRVCVDCHTVMKMVSKLMSREIIMRDICRFHHFRDGICSCGGYW 630
KNLR+C DCH +K++S + REII+RD RFHHFRDG CSCG YW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 29/401 (7%)
Query: 83 DGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNGEAGD 138
DG DVY SLIS + G A VF KM L ++N +++ + K G +
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 139 AFV-VFDHMRRSGLVGDGTTMLALLSAC--GDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
+ + M+ G+ D T L++ C G L +A + + S ++
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ----EAAQVFEEMKAAGFSYDKVTY 317
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
N+++D+Y A K+ + + V++NSLIS Y + G + +EL QM
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
G PD T ++L R + S+ + G N + I MY N G F
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 312 AHRAFNEI------PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
+ F+EI PD + +W ++ FG +G E +F EM P+ F +
Sbjct: 438 MMKIFDEINVCGLSPD--IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 366 LSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAG---KLDEAYATIDNMK 422
+SA S G ++ ++ +M D V P + Y+ ++ L R G + ++ A +++ +
Sbjct: 496 ISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 423 LKPNEDVWTALLSACRLHRNVKLAEISAQKLFE--MDPNKV 461
KPNE + +LL A + + L A++++ ++P V
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 181/451 (40%), Gaps = 53/451 (11%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
+NS+I YA + ++ L +M G K D FTY +L E + +
Sbjct: 352 YNSLISAYARDGMLD---EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV----RDLTSWNTMMSGYVKNG 134
+ G + ++ N+ I MY G +FD++ V D+ +WNT+++ + +NG
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSA---CGDL----------------MDLKLGK 175
+ VF M+R+G V + T L+SA CG DL
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 176 AVHGYVVR--------------NSGRLSNNEFVTNSMIDMYCNCDFI----SGARKLFEG 217
V + R GR NE S++ Y N I S A +++ G
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 218 LAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLG 277
+ V +L+ KC + F ++ G PD T+ S++ R +
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI------PDKSLASWTVMV 331
+ V Y+ ++G+ + A SL+ M++ F + EI PD + S+ ++
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD--IISYNTVI 706
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
+ + + R+A IF+EM I PD + + + + + +E + M + +
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGC 765
Query: 392 EPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
P Y+ +VD + + DEA +++++
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/538 (19%), Positives = 220/538 (40%), Gaps = 93/538 (17%)
Query: 12 VFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLRE 71
+ +++ +N++I C G+ + ++ EM + G D TY +L G +
Sbjct: 275 IAPDAYTYNTLI---TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMM 127
++V +V++G + NSLIS Y + G + A + ++M + D+ ++ T++
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
SG+ + G+ A +F+ MR +G + T A + G+ K + + + N
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG--KFTEMMKIFDEINVCG 449
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKCGGAFQVL 243
LS + N+++ ++ S +F+ + V + ++N+LIS Y +CG Q +
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSR--------------------ISALLLGSSVHSY 283
++ +M G PD T +VL A +R + L S +H+Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 284 LVKKGYGMNTAVG---------------TSLISMYANCGSFLCAHRAFNEIPDK----SL 324
K G+ ++ +L+ + + C A RAF+E+ ++ +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 325 ASWTVMVTGFG--------------------------------IHGKGRE---AISIFNE 349
+ MV+ +G +H + + + I E
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 350 MLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAG 409
+L K I PD + V+ A + + + IF +M R+ + P Y+ +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADS 748
Query: 410 KLDEAYATIDNM---KLKPNEDVWTALLSA-CRLHRNVKLAEISAQKLFEMDPNKVSG 463
+EA + M +PN++ + +++ C+L+R + A++ + L +DP+ G
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLRNLDPHAPKG 805
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 177/409 (43%), Gaps = 18/409 (4%)
Query: 41 LYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYL 100
L +M S G D +TY ++ C L + +V + G D N+L+ +Y
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 101 KFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGT 156
K A V ++M + + ++N+++S Y ++G +A + + M G D
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 157 TMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFE 216
T LLS ++ ++ +RN+G N N+ I MY N + K+F+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEE-MRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 217 GLAV----KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
+ V D V+WN+L++ + + G +V +F +M G VP+ T +++ A SR
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD-KSLASWTVMV 331
+ +V+ ++ G + + ++++ A G + + + E+ D + +
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 332 TGFGIHGKGRE---AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
+ + G+E S+ E+ I P + ++ CS L+ E + F ++ ++
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KE 622
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTALL 434
P T + +V + GR + +A +D MK + P+ + +L+
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 261 VISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP 320
+IS+LG R+S+ +++ + L + G+ ++ TSLIS +AN G + A F ++
Sbjct: 179 IISMLGKEGRVSS---AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 321 D----KSLASWTVMVTGFGIHGKGREAI-SIFNEMLGKNITPDEGVFTAVLSACSHSGLV 375
+ +L ++ V++ FG G I S+ +M I PD + +++ C L
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 376 DEGKEIFYKM-TRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWT 431
E ++F +M ++ + T Y+ L+D+ G++ + EA ++ M L P+ +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVT--YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 432 ALLSA 436
+L+SA
Sbjct: 354 SLISA 358
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 155/350 (44%), Gaps = 57/350 (16%)
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNG--EAGDAFVV 142
V V N+++ +Y + G A+ + D M R DL S+NT+++ +K+G A +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 143 FDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMY 202
D +R SGL D T LLSAC R SN
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACS--------------------RDSN------------ 312
Query: 203 CNCDFISGARKLFEGLAV----KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDE 258
+ GA K+FE + D ++N++IS Y +CG A + LF ++ + G PD
Sbjct: 313 -----LDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE 318
VT S+L A +R V+ + K G+G + ++I MY G A + + +
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 319 I-------PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
+ PD ++TV++ G + EA ++ +EML I P ++A++ +
Sbjct: 428 MKGLSGRNPDA--ITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+G +E ++ F M R +P YS ++D+L R + +A+ +M
Sbjct: 486 AGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 45/272 (16%)
Query: 194 VTNSMIDMYCNCDFISGARKLFEGL----AVKDTVSWNSLISGYEKCGGAFQVL--ELFG 247
V N+M+ +Y S A++L + + V D +S+N+LI+ K GG L EL
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+ G PD +T ++L ACSR S L + ++ +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNL----------------------DGAVKVFEDME 324
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
+ C PD L ++ M++ +G G EA +F E+ K PD + ++L
Sbjct: 325 AHRCQ-------PD--LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 368 ACSHSGLVDEGKEIFYKMTR-DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---- 422
A + ++ KE++ +M + + + T Y+ ++ + G+ G+LD A +MK
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMT--YNTIIHMYGKQGQLDLALQLYKDMKGLSG 433
Query: 423 LKPNEDVWTALLSAC-RLHRNVKLAEISAQKL 453
P+ +T L+ + + +R V+ A + ++ L
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 145/356 (40%), Gaps = 37/356 (10%)
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDL--KLGKAVH 178
T + T++ V N +A VF +R SG S C ++ + KLG
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASE-------SVCKSMVVVYCKLGFPET 734
Query: 179 GYVVRNSGRLSNNEFVTNSM----IDMYCNCDFISGARKLFEGLA----VKDTVSWNSLI 230
+ V N F + M I+ Y A + L D +WNSL+
Sbjct: 735 AHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLM 794
Query: 231 SGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC---SRISALLLGSSVHSYLVKK 287
S Y +CG + +F M G P ++ +L A R+ L + V L
Sbjct: 795 SAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV---VVEELQDM 851
Query: 288 GYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD----KSLASWTVMVTGFGIHGKGREA 343
G+ ++ + ++ +A G+ + ++ + ++ + +M+ + R+A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 344 ISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEI-FYKMTRDYNVEPTTTHYSCLV 402
+ +EM N + ++ ++L ++ + D K + Y+ ++ +EP T Y+ L+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKM--YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
Query: 403 DLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSACRLHRNVKLAEISAQKLFE 455
+ R + +E Y + M+ L P D + +L+SA + ++ AE +LFE
Sbjct: 970 IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE----QLFE 1021
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 112/255 (43%), Gaps = 22/255 (8%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
+N++I +GG + + ++ L + + G + D TY +L AC + ++V
Sbjct: 263 FNTLINA-RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNG 134
+ + D++ N++IS+Y + G A +F ++ ++ D ++N+++ + +
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
V+ M++ G D T ++ G L L ++ + SGR N + +
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR--NPDAI 439
Query: 195 TNSMIDMYCNCDFISGARKLFEGLA---------VKDTV-SWNSLISGYEKCGGAFQVLE 244
T +++ D + A + E A +K T+ ++++LI GY K G + +
Sbjct: 440 TYTVL-----IDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 245 LFGQMFIGGAVPDEV 259
F M G PD +
Sbjct: 495 TFSCMLRSGTKPDNL 509
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 182/420 (43%), Gaps = 44/420 (10%)
Query: 12 VFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREML-SFGQKADNFTYPFVLKACGDLLLR 70
+FKN N + AG RSL L++ M K + Y ++ G L
Sbjct: 98 IFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL 157
Query: 71 EMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT----SWNTM 126
+ + V + G+ V+ +LI+ Y + G T+ + D+M ++ ++NT+
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 127 MSGYVKNGEAGDAFV-VFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNS 185
++ + G + + +F MR G+ D T LLSAC +R
Sbjct: 218 INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA---------------IRGL 262
Query: 186 GRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
G E V +M D G V D +++ L+ + K +V +L
Sbjct: 263 G--DEAEMVFRTMND----------------GGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
G+M GG++PD + +L A ++ ++ V + G N + L++++
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 306 CGSFLCAHRAFNEIP----DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
G + + F E+ D A++ +++ FG G +E +++F++M+ +NI PD
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ ++ AC GL ++ ++I MT + ++ P++ Y+ +++ G+A +EA + M
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 171/420 (40%), Gaps = 27/420 (6%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
+N++I AC+ GG L L+ EM G + D TY +L AC L + V
Sbjct: 214 YNTVIN--ACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNG 134
+ G+ D+ + L+ + K + + +M + D+TS+N ++ Y K+G
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 135 EAGDAFVVFDHMRRSGLVGDGTT---MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+A VF M+ +G + T +L L G D++ ++ S +
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR-----QLFLEMKSSNTDPD 386
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFG 247
N +I+++ + LF + + D ++ +I K G ++
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGT--SLISMYAN 305
M VP V+ A + A L ++ ++ G N ++ T SL+ +A
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQ--AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Query: 306 CGSFLCAHRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
G + + + D + ++ + + GK EA+ + +M PDE
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
AVLS S + LVDE +E F +M + ++ P+ Y ++ + G+ + D+ ++ M
Sbjct: 565 LEAVLSVYSFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 117/294 (39%), Gaps = 48/294 (16%)
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAV----KDTVSWNSLISGYEKCGGAFQVLELF 246
NE + MI + + ++F+ + + S+ +LI+ Y + G LEL
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 247 GQMFIGGAVPDEVTVISVLGACSR----------ISALLLGSSVHSYLVK---------- 286
+M P +T +V+ AC+R + A + + +V
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 287 KGYG---------MNTAVGTSLISMYANCGSFLCAHRAFNEIPD-----------KSLAS 326
+G G MN ++ Y++ R ++ D + S
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
+ V++ + G +EA+ +F++M TP+ ++ +L+ SG D+ +++F +M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM- 378
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPNEDVWTALLSAC 437
+ N +P Y+ L+++ G G E +M ++P+ + + ++ AC
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPD----KSLASWTVMVTGFGIHGKGREAISIF 347
N + T +IS+ G F+E+P +S+ S+T ++ +G +G+ ++ +
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 348 NEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGR 407
+ M + I+P + V++AC+ GL EG + R ++P Y+ L+
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 408 AGKLDEA---YATIDNMKLKPNEDVWTALLSAC-RLHRNVKLAEI 448
G DEA + T+++ + P+ ++ L+ +L R K+ ++
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 45/360 (12%)
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVF 143
DV S++ +Y G++ R VF+ M ++ S+N +M Y +G +G A V
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 144 DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYC 203
++++G++ D + LL++ G + GKA +++ R N
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGR--SRQPGKAKEVFLMMRKERRKPN------------ 292
Query: 204 NCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVIS 263
V++N+LI Y G + +E+F QM G P+ V+V +
Sbjct: 293 -------------------VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 264 VLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS 323
+L ACSR + +V S +G +NTA S I Y N A + + K
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 324 L----ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
+ ++T++++G K EAIS EM +I + V+++VL A S G V E +
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 380 EIFYKMTRDYNVEPTTTHYSCLVDLLG---RAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
IF +M + EP Y+ ++ + GK E + ++ ++P+ +AL+ A
Sbjct: 454 SIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 512
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 207/475 (43%), Gaps = 43/475 (9%)
Query: 9 DQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK------ 62
+Q + + F +NS+I G + A +RS ++ EM+ G K + FTY +
Sbjct: 480 EQGIAPDIFCYNSLIIGLS-KAKRMDEARSFLV--EMVENGLKPNAFTYGAFISGYIEAS 536
Query: 63 --ACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA----RLVFDKMP 116
A D ++EM R G++ + + LI+ Y K G + A R + D+
Sbjct: 537 EFASADKYVKEM--RECGVL------PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKA 176
+ D ++ +M+G KN + DA +F MR G+ D + L++ L +++ +
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISG 232
+ +V L+ N + N ++ +C I A++L + ++VK + V++ ++I G
Sbjct: 649 IFDEMVEEG--LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 233 YEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMN 292
Y K G + LF +M + G VPD +++ C R++ + ++ KKG +
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASS 765
Query: 293 TAVGTSLISMYANCGSFLCAHRAFNEIPDKSL--------ASWTVMVTGFGIHGKGREAI 344
TA +LI+ G N + D S ++ +M+ G A
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 345 SIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDL 404
+F++M N+ P +T++L+ G E +F + +EP YS +++
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA-AGIEPDHIMYSVIINA 884
Query: 405 LGRAGKLDEAYATIDNMKLKPNEDVWTAL-LSACR--LHRNVKLAEIS-AQKLFE 455
+ G +A +D M K D L +S CR L K+ E+ A+K+ E
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 194/473 (41%), Gaps = 60/473 (12%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRV 76
+ ++ +I G C ++SL++ EM S G DN TY ++ LL
Sbjct: 278 YTYDVLIDGL-CKIKRLEDAKSLLV--EMDSLGVSLDNHTYSLLIDG---LLKGRNADAA 331
Query: 77 HGLV---VVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL----TSWNTMMSG 129
GLV V G+ Y+ + I + K G M A+ +FD M L ++ +++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGD----GTTMLALLSACGDL----------------- 168
Y + + + M++ +V GT + + S+ GDL
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS-GDLDGAYNIVKEMIASGCRP 450
Query: 169 -------------MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR--- 212
+ + G A+ ++ + F NS+I + AR
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 213 -KLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRI 271
++ E + ++ + ISGY + + +M G +P++V ++ +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 272 SALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA----SW 327
++ S + +V +G + T L++ A F E+ K +A S+
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 328 TVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTR 387
V++ GF G ++A SIF+EM+ + +TP+ ++ +L SG +++ KE+ +M+
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 388 DYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTALLSAC 437
+ P Y ++D ++G L EA+ D MKLK P+ V+T L+ C
Sbjct: 691 K-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 59/340 (17%)
Query: 41 LYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYL 100
++REM G D F+Y ++ L + + +V +GL +V + N L+ +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 101 KFGDMGTARLVFDKMPVRDL----TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGT 156
+ G++ A+ + D+M V+ L ++ T++ GY K+G+ +AF +FD M+ GLV D
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 157 TMLALLSACGDLMDL-----------------------------KLGKAVHGYVVRNSGR 187
L+ C L D+ K GK V N R
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN--R 791
Query: 188 LSN---------NEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYE 234
L + N+ N MID C + A++LF + + +++ SL++GY+
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR----ISALLLGSSVHSY-LVKKGY 289
K G ++ +F + G PD + ++ A + AL+L + + V G
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNE------IPDKS 323
++ + +L+S +A G A + IPD +
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 178/438 (40%), Gaps = 43/438 (9%)
Query: 1 MPQAQLIFDQIV----FKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFT 56
M +A+ +FD ++ + + S+I GY LV EM +T
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV---EMKKRNIVISPYT 419
Query: 57 YPFVLK---ACGDL-----LLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA 108
Y V+K + GDL +++EM + G +V + +LI +L+ G A
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEM--------IASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 109 RLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA 164
V +M + D+ +N+++ G K +A M +GL + T A +S
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 165 CGDLMDLKLGKAVHGYV--VRNSGRLSNNEFVTNSMIDMYCN----CDFISGARKLFEGL 218
+ + + YV +R G L N T +I+ YC + S R + +
Sbjct: 532 YIEASEFA---SADKYVKEMRECGVLPNKVLCT-GLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 219 AVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGS 278
+ D ++ L++G K E+F +M G PD + ++ S++ + S
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 279 SVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL----ASWTVMVTGF 334
S+ +V++G N + L+ + G A +E+ K L ++ ++ G+
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
G EA +F+EM K + PD V+T ++ C V+ IF T +
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF--GTNKKGCASS 765
Query: 395 TTHYSCLVDLLGRAGKLD 412
T ++ L++ + + GK +
Sbjct: 766 TAPFNALINWVFKFGKTE 783
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 45/360 (12%)
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVF 143
DV S++ +Y G++ R VF+ M ++ S+N +M Y +G +G A V
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 144 DHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYC 203
++++G++ D + LL++ G + GKA +++ R N
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGR--SRQPGKAKEVFLMMRKERRKPN------------ 424
Query: 204 NCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVIS 263
V++N+LI Y G + +E+F QM G P+ V+V +
Sbjct: 425 -------------------VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 264 VLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS 323
+L ACSR + +V S +G +NTA S I Y N A + + K
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 324 L----ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
+ ++T++++G K EAIS EM +I + V+++VL A S G V E +
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 380 EIFYKMTRDYNVEPTTTHYSCLVDLLG---RAGKLDEAYATIDNMKLKPNEDVWTALLSA 436
IF +M + EP Y+ ++ + GK E + ++ ++P+ +AL+ A
Sbjct: 586 SIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 178/413 (43%), Gaps = 18/413 (4%)
Query: 39 LVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISM 98
L ++R M+ G K ++ V++ E ++ V G++ + Y N++I+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 99 YLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
Y+K D V M V + ++ +M VKNG+ DA +FD MR G+ D
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 155 GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKL 214
+L+S ++K + + LS + + ++ID C + A L
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKG--LSPSSYTYGALIDGVCKVGEMGAAEIL 386
Query: 215 FEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSR 270
+ K V +N+LI GY + G + ++ M G D T ++ +R
Sbjct: 387 MNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Query: 271 ISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA----S 326
+ +++ G ++T T+LI +Y G+ A R F E+ K + +
Sbjct: 447 LKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
+ VM+ + GK +EA + M + PD +T+++ + VDE +F +M
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKP---NEDVWTALLSA 436
++ + Y+ ++ L +AGK DEA+ D MK K + V+TAL+ +
Sbjct: 567 LK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 144/352 (40%), Gaps = 47/352 (13%)
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
YV NG + VFD+M + GL D + + L A + L + +V + +++
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLEL 245
+ +++ C + ++KL + +VK + ++N++I+ Y K V +
Sbjct: 224 --VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGV 281
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
M G V ++VT ++ + + + + ++G + V TSLIS
Sbjct: 282 LKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341
Query: 306 CGSFLCAHRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
G+ A F+E+ +K L+ ++ ++ G G+ A + NEM K + + V
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 362 FTAVLSACSHSGLVDEGKEIF---------------------YKMTRDYN---------- 390
F ++ G+VDE I+ + + Y+
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 391 ---VEPTTTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLSA 436
V+ +T Y+ L+D+ + G ++EA + + + ++PN + ++ A
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 8/278 (2%)
Query: 93 NSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVF----DHMRR 148
N L+ M++ G + R +FD+MP RD SW + G ++ G+ DA +F H ++
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 149 SGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFI 208
+ +L AC + D +LGK VH + + +++ S+I Y +
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 209 SGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVIS-VLGA 267
A + L+ +TV+W + ++ + G +V+ F +M G + V+V S VL A
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHG-IKKNVSVFSNVLKA 305
Query: 268 CSRIS-ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK-SLA 325
CS +S G VH+ +K G+ + + LI MY G A + F D+ S++
Sbjct: 306 CSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVS 365
Query: 326 SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
W MV + +G EAI + +M I + +
Sbjct: 366 CWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPF-----VL 61
+FD++ ++ W + G C G+ + L+ ML QK F P VL
Sbjct: 145 MFDRMPHRDFHSWAIVFLG--CIEMGDYEDAAF-LFVSMLKHSQKG-AFKIPSWILGCVL 200
Query: 62 KACGDLLLREMGIRVHGLVVVDGL--ESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
KAC + E+G +VH L G E D Y+ SLI Y +F + A LV ++ +
Sbjct: 201 KACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNAN 260
Query: 120 LTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMD-LKLGKAVH 178
+W ++ + GE + F M G+ + + +L AC + D + G+ VH
Sbjct: 261 TVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVH 320
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVS-WNSLISGYEKCG 237
++ ++ + +I+MY + A K+F+ + +VS WN++++ Y + G
Sbjct: 321 ANAIKLG--FESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 238 GAFQVLELFGQMFIGG 253
+ ++L QM G
Sbjct: 379 IYIEAIKLLYQMKATG 394
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 12/250 (4%)
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCG----GAFQVLELFGQMFI 251
N ++ M+ +C + R++F+ + +D SW + G + G AF + +
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY--GMNTAVGTSLISMYANCGSF 309
G + VL AC+ I LG VH+ K G+ ++ + SLI Y G F
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFY---GEF 243
Query: 310 LC---AHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
C A+ +++ + + +W VT G+ +E I F EM I + VF+ VL
Sbjct: 244 RCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVL 303
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPN 426
ACS + + E L+++ G+ GK+ +A + K + +
Sbjct: 304 KACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETS 363
Query: 427 EDVWTALLSA 436
W A++++
Sbjct: 364 VSCWNAMVAS 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 1 MPQAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFV 60
+ A L+ Q+ N+ W + + R + EM + G K + + V
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFI---EMGNHGIKKNVSVFSNV 302
Query: 61 LKACGDLLLR-EMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD 119
LKAC + G +VH + G ESD + LI MY K+G + A VF +D
Sbjct: 303 LKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFK--SSKD 360
Query: 120 LTS---WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTM 158
TS WN M++ Y++NG +A + M+ +G+ T +
Sbjct: 361 ETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLL 402
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 10/273 (3%)
Query: 185 SGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKCGGAF 240
S ++ F ++ +C + I A L + V ++V + +LI KC
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ L+L +MF+ G VPD T V+ + + + + + ++ +G+ + L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDE 359
+ G A F IP + + ++ GF HG+ +A ++ ++M+ I PD
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+ +++ GLV E+ + M R+ +P Y+ LVD + GK+DEAY ++
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 420 NMK---LKPNEDVWTALLSA-CRLHRNVKLAEI 448
M LKPN + L+SA C+ HR + EI
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 157/371 (42%), Gaps = 27/371 (7%)
Query: 86 ESDVYVGNSLISMYLKFGDMGTARLVFDKMP-----VRDLTSWNTMMSGYVKNGEAGDAF 140
+ ++ + N+LI ++ G + A+ V M V D+ ++N+++ GY K G G A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 141 VVFDHMRRSGLVGDGTTMLALLSA-CGDLMDLKLGKAVHGYVVRN---SGRLSNNEFVTN 196
V MR G + + L+ C KLGK Y V N + L N N
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFC------KLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 197 SMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+I +C I A ++F + K D ++NSLISG + L L M
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
G V + VT +++ A R + + + +V +G ++ SLI G A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 313 HRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
F ++ A S +++ G G EA+ EM+ + TPD F ++++
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKP 425
+G +++G +F K+ + + P T ++ L+ L + G + +A +D P
Sbjct: 644 LCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 426 NEDVWTALLSA 436
N W+ LL +
Sbjct: 703 NHRTWSILLQS 713
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 188/439 (42%), Gaps = 52/439 (11%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTY-PFVLKACGDLLLREMG 73
NS ++ ++I + N + +L L EM G D T+ +L C + E
Sbjct: 251 NSVIYQTLIHSLS---KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKN 133
V+ +++ D+ G L++ K G + A+ +F ++P ++ +NT++ G+V +
Sbjct: 308 KMVNRMLIRGFAPDDITYG-YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 134 GEAGDAFVVFDHMRRS-GLVGDGTTMLALLSACGD--LMDLKLGKAVHGYVVRNSGRLSN 190
G DA V M S G+V D T +L+ L+ L L + +H +RN G
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL-EVLHD--MRNKG-CKP 422
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAV----KDTVSWNSLISGYEKCGGAFQVLELF 246
N + ++D +C I A + ++ +TV +N LIS + K + +E+F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 247 GQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANC 306
+M G PD T S++ + + + ++ +G NT
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV------------ 530
Query: 307 GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
++ ++ F G+ +EA + NEM+ + DE + +++
Sbjct: 531 -------------------TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK-- 424
+G VD+ + +F KM RD + P+ + L++ L R+G ++EA M L+
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHA-PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 425 -PNEDVWTALLSA-CRLHR 441
P+ + +L++ CR R
Sbjct: 631 TPDIVTFNSLINGLCRAGR 649
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 214/489 (43%), Gaps = 60/489 (12%)
Query: 41 LYREMLSFGQKADNFTYPFVLKA-CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMY 99
+Y+E+ G + +T ++ A C D + ++G + V G+ D+ N+LIS Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVTYNTLISAY 280
Query: 100 LKFGDMGTARLVFDKMPVRDLT----SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDG 155
G M A + + MP + + ++NT+++G K+G+ A VF M RSGL D
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 156 TTMLALL-SAC--GDLMDLK------------------------------LGKAVHGY-V 181
TT +LL AC GD+++ + L KA+ +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 182 VRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLF-----EGLAVKDTVSWNSLISGYEKC 236
V+ +G + +N T +I YC IS A L +G A+ D V++N+++ G K
Sbjct: 401 VKEAGLIPDNVIYT-ILIQGYCRKGMISVAMNLRNEMLQQGCAM-DVVTYNTILHGLCKR 458
Query: 237 GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVG 296
+ +LF +M PD T+ ++ ++ L + + +K ++
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 297 TSLISMYANCGSFLCAHRAFNEIPDKSL----ASWTVMVTGFGIHGKGREAISIFNEMLG 352
+L+ + G A + ++ K + S++++V G EA +++EM+
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 353 KNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLD 412
KNI P + +++ SG +G+ KM + V P Y+ L+ R +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYGFVREENMS 637
Query: 413 EAYATIDNMK-----LKPNEDVWTALLSACRLHRNVKLAEISAQKLFE--MDPNKVSGYV 465
+A+ + M+ L P+ + ++L +K AE+ +K+ E ++P++ S Y
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR-STYT 696
Query: 466 CLSNIYAAE 474
C+ N + ++
Sbjct: 697 CMINGFVSQ 705
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 177/425 (41%), Gaps = 32/425 (7%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTY-PFVLKAC--GDLLLREMG 73
+ +N++I G C G R+ ++ EML G D+ TY +++AC GD++ E
Sbjct: 306 YTYNTVINGL-CKHG--KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE-- 360
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSG 129
+V + + D+ +S++S++ + G++ A + F+ + + D + ++ G
Sbjct: 361 -KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA-CGDLMDLKLGKAVHGYVVRNSGRL 188
Y + G A + + M + G D T +L C M LG+A + L
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM---LGEADKLFNEMTERAL 476
Query: 189 SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLE 244
+ + +ID +C + A +LF+ + K D V++N+L+ G+ K G E
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
++ M +P ++ ++ A L V ++ K + S+I Y
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 305 NCG------SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKN--IT 356
G SFL + +PD S+ ++ GF +A + +M + +
Sbjct: 597 RSGNASDGESFLEKMISEGFVPD--CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
PD + ++L + E + + KM + V P + Y+C+++ L EA+
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 417 TIDNM 421
D M
Sbjct: 714 IHDEM 718
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 151/370 (40%), Gaps = 58/370 (15%)
Query: 3 QAQLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLK 62
+A LI D ++ + +I+GY C G S ++ L EML G D TY +L
Sbjct: 403 EAGLIPDNVI------YTILIQGY-CRKG--MISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 63 A-CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR--- 118
C +L E ++ + L D Y LI + K G++ A +F KM +
Sbjct: 454 GLCKRKMLGEAD-KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 119 -DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA-CGDLMDLKLGKA 176
D+ ++NT++ G+ K G+ A ++ M ++ + L++A C L +A
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG---HLAEA 569
Query: 177 VHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISG 232
+ S + + NSMI YC S E + V D +S+N+LI G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 233 Y---EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY 289
+ E AF +++ + GG VPD T S+L R + + V ++++G
Sbjct: 630 FVREENMSKAFGLVKKMEEE-QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNE 349
PD+S ++T M+ GF EA I +E
Sbjct: 689 N-----------------------------PDRS--TYTCMINGFVSQDNLTEAFRIHDE 717
Query: 350 MLGKNITPDE 359
ML + +PD+
Sbjct: 718 MLQRGFSPDD 727
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 18/262 (6%)
Query: 171 LKLGKAVHGYVVRNSGRLSNNEFVTNSMIDM--YCNCDFISGARKLFEGLAVKDTVSWNS 228
L L +H ++ SGRLS+ + MI + ++ F D+V ++
Sbjct: 114 LSLSAMIH--ILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV-FDL 170
Query: 229 LISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
LI Y + + E F + G +++G+ RI + L V+ + + G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 289 YGMNTAVGTSLISMYANC--------GSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKG 340
G+N V T I + A C G+FL + PD + ++ +++ + G
Sbjct: 231 VGIN--VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD--IVTYNTLISAYSSKGLM 286
Query: 341 REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSC 400
EA + N M GK +P + V++ G + KE+F +M R + P +T Y
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRS 345
Query: 401 LVDLLGRAGKLDEAYATIDNMK 422
L+ + G + E +M+
Sbjct: 346 LLMEACKKGDVVETEKVFSDMR 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 21/168 (12%)
Query: 1 MPQAQLIFDQIVFKN----SFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFT 56
+ +A ++D+++ KN + NSMI+GY C +G S S + +M+S G D +
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGY-CRSGNASDGESFL--EKMISEGFVPDCIS 622
Query: 57 YPFVLKACGDLLLREMGI-RVHGLVV-----VDGLESDVYVGNSLISMYLKFGDMGTARL 110
Y ++ +RE + + GLV GL DV+ NS++ + + M A +
Sbjct: 623 YNTLIYG----FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 111 VFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
V KM R D +++ M++G+V +AF + D M + G D
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 152/339 (44%), Gaps = 14/339 (4%)
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D+ S++T+++GY + GE + + + M+R GL + +++ + L +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD----TVSWNSLISGYE 234
++R + + V ++ID +C I A K F + +D +++ ++ISG+
Sbjct: 340 SEMIRQG--ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
+ G + +LF +MF G PD VT ++ + + VH+++++ G N
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 295 VGTSLISMYANCGSFLCAHRAFNEI----PDKSLASWTVMVTGFGIHGKGREAISIFNEM 350
T+LI G A+ +E+ ++ ++ +V G G EA+ + E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGK 410
+ D +T ++ A SG +D+ +EI +M ++PT ++ L++ G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 411 LDEAYATIDNMKLK---PNEDVWTALLSACRLHRNVKLA 446
L++ ++ M K PN + +L+ + N+K A
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 14/316 (4%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAF 140
+ DV ++IS + + GDM A +F +M + D ++ +++GY K G DAF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 141 VVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMID 200
V +HM ++G + T L+ DL + + + L N F NS+++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVN 499
Query: 201 MYCNCDFISGARKL---FEGLAVK-DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
C I A KL FE + DTV++ +L+ Y K G + E+ +M G P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
VT ++ L G + ++++ KG N SL+ Y + A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 317 NEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
++ + + ++ +V G +EA +F EM GK + ++ ++
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 373 GLVDEGKEIFYKMTRD 388
E +E+F +M R+
Sbjct: 680 KKFLEAREVFDQMRRE 695
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 144/356 (40%), Gaps = 54/356 (15%)
Query: 87 SDVYVGNSLISMYLKFGDMGTARLVFDKM----PVRDLTSWNTMMSGYVKNG-EAGDAFV 141
SD V + + + FG + AR VF+KM V + S N ++ K+ + A +
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII 232
Query: 142 VFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDM 201
VF G+ + V Y N +I
Sbjct: 233 VFREFPEVGVCWN----------------------VASY---------------NIVIHF 255
Query: 202 YCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPD 257
C I A L + +K D +S++++++GY + G +V +L M G P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN 317
S++G RI L S ++++G +T V T+LI + G A + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 318 EIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
E+ + + ++T +++GF G EA +F+EM K + PD FT +++ +G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPN 426
+ + + M + P Y+ L+D L + G LD A + M L+PN
Sbjct: 436 HMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 138/354 (38%), Gaps = 44/354 (12%)
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT----SWNTMMSGYVKNGE 135
++ G+ D V +LI + K GD+ A F +M RD+T ++ ++SG+ + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
+A +F M GL D T L ++GY +G + + V
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTEL---------------INGYC--KAGHMKDAFRVH 444
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
N MI C+ + V++ +LI G K G EL +M+ G
Sbjct: 445 NHMIQAGCS----------------PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
P+ T S++ + + + G +T T+L+ Y G A
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 316 FNEIPDKSL----ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA-CS 370
E+ K L ++ V++ GF +HG + + N ML K I P+ F +++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+ L + YK V P Y LV +A + EA+ MK K
Sbjct: 609 RNNL--KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 12/255 (4%)
Query: 189 SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQ 248
S N ++T D Y I R+ E + S+N +I + G + L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 249 MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
M + G PD ++ +V+ R L + + +KG N+ + S+I +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 309 FLCAHRAFNE------IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
A AF+E +PD + +T ++ GF G R A F EM ++ITPD +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM- 421
TA++S G + E ++F++M +EP + ++ L++ +AG + +A+ ++M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 422 --KLKPNEDVWTALL 434
PN +T L+
Sbjct: 449 QAGCSPNVVTYTTLI 463
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 136/334 (40%), Gaps = 49/334 (14%)
Query: 41 LYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYL 100
L+ EM G + D+ T+ ++ + RVH ++ G +V +LI
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 101 KFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
K GD+ +A + +M P ++ ++N++++G K+G +A + +GL D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 155 GTTMLALLSA-CGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARK 213
T L+ A C SG + + + M+
Sbjct: 526 TVTYTTLMDAYC------------------KSGEMDKAQEILKEML-------------- 553
Query: 214 LFEGLAVKDT-VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
G ++ T V++N L++G+ G +L M G P+ T S++ +
Sbjct: 554 ---GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWT 328
L ++++ + +G G + +L+ + + A F E+ K S+++++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
V++ GF K EA +F++M + + D+ +F
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 21/256 (8%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N + ++I G C G S+ L+ EM G + + FTY ++ E +
Sbjct: 455 NVVTYTTLIDGL-CKEGDLDSANELL--HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL----TSWNTMMSGY 130
++ G GL +D +L+ Y K G+M A+ + +M + L ++N +M+G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 131 VKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV----VRNSG 186
+G D + + M G+ + TT +L+ +LK A++ + V G
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQV 242
+ N ++ +C + A LF+ + K +++ LI G+ K +
Sbjct: 632 KTYEN------LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 243 LELFGQMFIGGAVPDE 258
E+F QM G D+
Sbjct: 686 REVFDQMRREGLAADK 701
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 152/339 (44%), Gaps = 14/339 (4%)
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D+ S++T+++GY + GE + + + M+R GL + +++ + L +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD----TVSWNSLISGYE 234
++R + + V ++ID +C I A K F + +D +++ ++ISG+
Sbjct: 340 SEMIRQG--ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
+ G + +LF +MF G PD VT ++ + + VH+++++ G N
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 295 VGTSLISMYANCGSFLCAHRAFNEI----PDKSLASWTVMVTGFGIHGKGREAISIFNEM 350
T+LI G A+ +E+ ++ ++ +V G G EA+ + E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGK 410
+ D +T ++ A SG +D+ +EI +M ++PT ++ L++ G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 411 LDEAYATIDNMKLK---PNEDVWTALLSACRLHRNVKLA 446
L++ ++ M K PN + +L+ + N+K A
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 14/316 (4%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAF 140
+ DV ++IS + + GDM A +F +M + D ++ +++GY K G DAF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 141 VVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMID 200
V +HM ++G + T L+ DL + + + L N F NS+++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVN 499
Query: 201 MYCNCDFISGARKL---FEGLAVK-DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
C I A KL FE + DTV++ +L+ Y K G + E+ +M G P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
VT ++ L G + ++++ KG N SL+ Y + A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 317 NEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
++ + + ++ +V G +EA +F EM GK + ++ ++
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 373 GLVDEGKEIFYKMTRD 388
E +E+F +M R+
Sbjct: 680 KKFLEAREVFDQMRRE 695
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 144/356 (40%), Gaps = 54/356 (15%)
Query: 87 SDVYVGNSLISMYLKFGDMGTARLVFDKM----PVRDLTSWNTMMSGYVKNG-EAGDAFV 141
SD V + + + FG + AR VF+KM V + S N ++ K+ + A +
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII 232
Query: 142 VFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDM 201
VF G+ + V Y N +I
Sbjct: 233 VFREFPEVGVCWN----------------------VASY---------------NIVIHF 255
Query: 202 YCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPD 257
C I A L + +K D +S++++++GY + G +V +L M G P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 258 EVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFN 317
S++G RI L S ++++G +T V T+LI + G A + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 318 EIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
E+ + + ++T +++GF G EA +F+EM K + PD FT +++ +G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 374 LVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPN 426
+ + + M + P Y+ L+D L + G LD A + M L+PN
Sbjct: 436 HMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 138/354 (38%), Gaps = 44/354 (12%)
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT----SWNTMMSGYVKNGE 135
++ G+ D V +LI + K GD+ A F +M RD+T ++ ++SG+ + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
+A +F M GL D T L ++GY +G + + V
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTEL---------------INGYC--KAGHMKDAFRVH 444
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
N MI C+ + V++ +LI G K G EL +M+ G
Sbjct: 445 NHMIQAGCS----------------PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
P+ T S++ + + + G +T T+L+ Y G A
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 316 FNEIPDKSL----ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA-CS 370
E+ K L ++ V++ GF +HG + + N ML K I P+ F +++ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+ L + YK V P Y LV +A + EA+ MK K
Sbjct: 609 RNNL--KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 12/255 (4%)
Query: 189 SNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQ 248
S N ++T D Y I R+ E + S+N +I + G + L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 249 MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
M + G PD ++ +V+ R L + + +KG N+ + S+I +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 309 FLCAHRAFNE------IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
A AF+E +PD + +T ++ GF G R A F EM ++ITPD +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVV--YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM- 421
TA++S G + E ++F++M +EP + ++ L++ +AG + +A+ ++M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 422 --KLKPNEDVWTALL 434
PN +T L+
Sbjct: 449 QAGCSPNVVTYTTLI 463
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 136/334 (40%), Gaps = 49/334 (14%)
Query: 41 LYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYL 100
L+ EM G + D+ T+ ++ + RVH ++ G +V +LI
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 101 KFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
K GD+ +A + +M P ++ ++N++++G K+G +A + +GL D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 155 GTTMLALLSA-CGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARK 213
T L+ A C SG + + + M+
Sbjct: 526 TVTYTTLMDAYC------------------KSGEMDKAQEILKEML-------------- 553
Query: 214 LFEGLAVKDT-VSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRIS 272
G ++ T V++N L++G+ G +L M G P+ T S++ +
Sbjct: 554 ---GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 273 ALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWT 328
L ++++ + +G G + +L+ + + A F E+ K S+++++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
V++ GF K EA +F++M + + D+ +F
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 21/256 (8%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N + ++I G C G S+ L+ EM G + + FTY ++ E +
Sbjct: 455 NVVTYTTLIDGL-CKEGDLDSANELL--HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL----TSWNTMMSGY 130
++ G GL +D +L+ Y K G+M A+ + +M + L ++N +M+G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 131 VKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV----VRNSG 186
+G D + + M G+ + TT +L+ +LK A++ + V G
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQV 242
+ N ++ +C + A LF+ + K +++ LI G+ K +
Sbjct: 632 KTYEN------LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 243 LELFGQMFIGGAVPDE 258
E+F QM G D+
Sbjct: 686 REVFDQMRREGLAADK 701
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 172/404 (42%), Gaps = 60/404 (14%)
Query: 61 LKACGDLLLREMGIRVHGLV------VVD-GLESDVYVGNSLISMYLKFGDMGTARLVFD 113
++ CG+LL R M + G + ++D G +VYV N L++ + K G++ A+ VFD
Sbjct: 205 IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFD 264
Query: 114 KMPVRDL----TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLM 169
++ R L S+NT+++GY K G + F + M +S
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS-------------------- 304
Query: 170 DLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVS 225
R + F +++I+ C + + GA LF+ + + + V
Sbjct: 305 -----------------RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 226 WNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLV 285
+ +LI G+ + G + E + +M G PD V +++ + L+ ++ ++
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 286 KKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL----ASWTVMVTGFGIHGKGR 341
++G + T+LI + G A E+ + ++ +V G G+
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 342 EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCL 401
+A EML I PD+ +T ++ A G G ++ +M D +V P+ Y+ L
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVL 526
Query: 402 VDLLGRAGKLDEAYATID---NMKLKPNEDVWTALLSACRLHRN 442
++ L + G++ A +D N+ + P++ + LL H N
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 157/419 (37%), Gaps = 87/419 (20%)
Query: 4 AQLIFDQIVFKN----SFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPF 59
AQ +FD+I ++ +N++I GY C G + L +M + D FTY
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGY-CKVG--NLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 60 VLKACGDLLLREMGIR-VHGL---VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM 115
++ A L +E + HGL + GL + + +LI + + G++ + + KM
Sbjct: 316 LINA----LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 116 PVR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDL 171
+ D+ +NT+++G+ KNG+ A + D M R GL D T L+ D+
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431
Query: 172 KLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLIS 231
+ + + +N L D V +++L+
Sbjct: 432 ETALEIRKEMDQNGIEL---------------------------------DRVGFSALVC 458
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
G K G +M G PD+VT ++ A KKG
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA----------------FCKKG--- 499
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEML 351
+ G L+ + G +P S+ ++ V++ G G+ + A + + ML
Sbjct: 500 DAQTGFKLLKEMQSDG----------HVP--SVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 352 GKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGK 410
+ PD+ + +L H + K Y + + Y +V+ L RA K
Sbjct: 548 NIGVVPDDITYNTLLEG--HHRHANSSKR--YIQKPEIGIVADLASYKSIVNELDRASK 602
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 157/361 (43%), Gaps = 47/361 (13%)
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVF 143
+V+ N LI + G++ A +FDKM + ++ ++NT++ GY K + D F +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 144 DHMRRSGLVGDGTTMLALLSA-CGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMY 202
M GL + + +++ C + GR+ FV M
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCRE------------------GRMKEVSFVLTEM---- 301
Query: 203 CNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVI 262
R+ G ++ D V++N+LI GY K G Q L + +M G P +T
Sbjct: 302 --------NRR---GYSL-DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 263 SVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK 322
S++ + + + + +G N T+L+ ++ G A+R E+ D
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 323 ----SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
S+ ++ ++ G + GK +AI++ +M K ++PD ++ VLS S VDE
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 379 KEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLS 435
+ +M + ++P T YS L+ + EA Y + + L P+E +TAL++
Sbjct: 470 LRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 436 A 436
A
Sbjct: 529 A 529
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 179/415 (43%), Gaps = 30/415 (7%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+ + V N F +N +IRG+ C AG + +L L+ +M + G + TY ++
Sbjct: 196 MLESQVSPNVFTYNILIRGF-CFAG--NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 67 LLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTS 122
L + G ++ + + GLE ++ N +I+ + G M V +M R D +
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 123 WNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL-SACGDLMDLKLGKAVHGYV 181
+NT++ GY K G A V+ M R GL T +L+ S C K G
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC------KAGNMNRAME 366
Query: 182 VRNSGR---LSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYE 234
+ R L NE +++D + +++ A ++ + V++N+LI+G+
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
G + + M G PD V+ +VL R + V +V+KG +T
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 295 VGTSLISMYANCGSFLCAHRAFNEI------PDKSLASWTVMVTGFGIHGKGREAISIFN 348
+SLI + A + E+ PD+ ++T ++ + + G +A+ + N
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE--FTYTALINAYCMEGDLEKALQLHN 544
Query: 349 EMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVD 403
EM+ K + PD ++ +++ + E K + K+ + +V P+ Y L++
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIE 598
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 35/432 (8%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA-CGDLLLREMG 73
N +N +I G C G S VL EM G D TY ++K C + +
Sbjct: 274 NLISYNVVINGL-CREG-RMKEVSFVL-TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ-A 329
Query: 74 IRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL----TSWNTMMSG 129
+ +H ++ GL V SLI K G+M A D+M VR L ++ T++ G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
+ + G +A+ V M +G T AL++ G + K+ A+ LS
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN--GHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 190 NNEFVTNSMIDMYCNCDFISGA----RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLEL 245
+ ++++ +C + A R++ E DT++++SLI G+ + + +L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY------------GMNT 293
+ +M G PDE T +++ A L +H+ +V+KG G+N
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 294 AVGTS-----LISMY--ANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISI 346
T L+ ++ + S + H + S ++ GF + G EA +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
F MLGKN PD + ++ +G + + ++ +M + + T T + LV L
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA-LVKALH 686
Query: 407 RAGKLDEAYATI 418
+ GK++E + I
Sbjct: 687 KEGKVNELNSVI 698
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 181/439 (41%), Gaps = 69/439 (15%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA---CGDL-----LLR 70
+N++I+GY C G + ++LV++ EML G TY ++ + G++ L
Sbjct: 313 YNTLIKGY-CKEG--NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 71 EMGIRVHGL--------VVVDGLESDVYVG---------------------NSLISMYLK 101
+M RV GL +VDG Y+ N+LI+ +
Sbjct: 370 QM--RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 102 FGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTT 157
G M A V + M + D+ S++T++SG+ ++ + +A V M G+ D T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 158 MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG 217
+L+ + K ++ ++R L +EF ++I+ YC + A +L
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVG--LPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 218 LAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISA 273
+ K D V+++ LI+G K + L ++F +VP +VT +++ CS I
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 274 LLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTVMVTG 333
+ S + + +K GM T SM N PD + ++ +M+ G
Sbjct: 606 KSVVSLIKGFCMK---GMMTEADQVFESMLGK-----------NHKPDGT--AYNIMIHG 649
Query: 334 FGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP 393
G R+A +++ EM+ A++ A G V+E + + R +
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Query: 394 TTTHYSCLVDLLGRAGKLD 412
LV++ R G +D
Sbjct: 710 -AEQAKVLVEINHREGNMD 727
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
+TV++N LI Y + + + +F QM G PD VT +++ ++ L + ++
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIH 337
+ + G +T + +I+ G AHR F E+ + +L ++ +M+ +H
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI---ALH 509
Query: 338 GKGRE---AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
K R A+ ++ +M PD+ ++ V+ H G ++E + +F +M R N P
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK-NWVPD 568
Query: 395 TTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLSA-CRLHR 441
Y LVDL G+AG +D+A Y + L+PN +LLS R+HR
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 198/471 (42%), Gaps = 48/471 (10%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGD 66
+ D V N F++N++I G + +L+ M G + ++ TY ++ D
Sbjct: 358 VVDFGVSPNLFVYNALIDSLC---KGRKFHEAELLFDRMGKIGLRPNDVTYSILI----D 410
Query: 67 LLLR----EMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDL-- 120
+ R + + G +V GL+ VY NSLI+ + KFGD+ A +M + L
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 121 --TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL---VGDGTTMLALLSACGDLMDLKLGK 175
++ ++M GY G+ A ++ M G+ + TT+L+ L G + D
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD----- 525
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGA----RKLFEGLAVKDTVSWNSLIS 231
AV + + N N MI+ YC +S A +++ E V DT S+ LI
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
G G A + + G +E+ +L R L SV +V++G +
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 292 NTAVGTSLISMYANCGSFLCAHRAF-----NEIPDKSLAS----WTVMVTGFGIHGKGRE 342
+ LI GS R E+ D+ L +T M+ G +E
Sbjct: 646 DLVCYGVLID-----GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
A I++ M+ + P+E +TAV++ +G V+E + + KM +V P Y C +
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFL 759
Query: 403 DLLGRAGKLDEAYAT-IDNMKLK---PNEDVWTALLSA-CRLHRNVKLAEI 448
D+L + G++D A + N LK N + L+ CR R + +E+
Sbjct: 760 DILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 152/354 (42%), Gaps = 17/354 (4%)
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDA 139
G+ DVY+ +I + D+ A+ + M ++ +N ++ G K + +A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 140 FVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMI 199
+ + L D T L+ + + ++G + ++ R S +E +S++
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML--CLRFSPSEAAVSSLV 339
Query: 200 DMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKCGGAFQVLEL-FGQMFIGGA 254
+ I A L + + + +N+LI K G F EL F +M G
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK-GRKFHEAELLFDRMGKIGL 398
Query: 255 VPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHR 314
P++VT ++ R L S +V G ++ SLI+ + G A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 315 AFNEIPDKSL----ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
E+ +K L ++T ++ G+ GK +A+ +++EM GK I P FT +LS
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+GL+ + ++F +M ++NV+P Y+ +++ G + +A+ + M K
Sbjct: 519 RAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 185/448 (41%), Gaps = 59/448 (13%)
Query: 32 GNSSSRSLVLYREMLSFGQKADNFTYPFVLKACG-DLLLREM------------------ 72
G S + L + EM S G K D FT VL AC + LLRE
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 73 -----------GIRVHGLVVVDGLE-----SDVYVGNSLISMYLKFGDMGTARLVFDKMP 116
G+ L V+ +E +D N L++ Y++ G A V + M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 117 VR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLK 172
+ + ++ T++ Y K G+ +A +F M+ +G V + T A+LS G +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK--KSR 436
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV----KDTVSWNS 228
+ + S S N N+M+ + N ++F + D ++N+
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 229 LISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
LIS Y +CG +++G+M G T ++L A +R G +V S + KG
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 289 YGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL-ASWTVMVTGFGIHGKGR------ 341
+ + ++ YA G++L R N I + + SW ++ T + K R
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 342 EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCL 401
A ++F + PD +F ++LS + + + D+ + I + D + P Y+ L
Sbjct: 617 RAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED-GLSPDLVTYNSL 672
Query: 402 VDLLGRAG---KLDEAYATIDNMKLKPN 426
+D+ R G K +E T++ +LKP+
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPD 700
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 224 VSWNSLISGYEKCGGAF-QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHS 282
V++N ++ + K G ++ ++L + +M G DE T +VL AC+R L +
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 283 YLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWTV----MVTGFGIHG 338
L GY T +L+ ++ G + A E+ + S + +V +V + G
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 339 KGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY 398
+EA + M K + P+ +T V+ A +G DE ++FY M ++ P T Y
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTY 424
Query: 399 SCLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSAC 437
+ ++ LLG+ + +E + +MK PN W +L+ C
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 228 SLISGYEKCGGAFQVLELFGQMFIG---GAVPDEVTVISV-LGACSRISALLLGSSVHSY 283
SL+ G + G + + LF + + GA+ + VI + + R S + + +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 284 LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI----PDKSLASWTVMVTGFGIHGK 339
+ + Y ++ T+++ Y+ G + A F + P +L ++ V++ FG G+
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 340 G-REAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHY 398
R+ + + +EM K + DE + VLSAC+ GL+ E KE F ++ + EP T Y
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTY 319
Query: 399 SCLVDLLGRAGKLDEAYATIDNMK 422
+ L+ + G+AG EA + + M+
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEME 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 185/460 (40%), Gaps = 33/460 (7%)
Query: 5 QLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC 64
+++ + V N+ + ++I Y AG +L L+ M G + TY VL
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYG-KAG--KEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 65 GDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM------PVR 118
G I++ + +G + N+++++ G VF +M P R
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
D ++NT++S Y + G DA ++ M R+G TT ALL+A D + G+ V
Sbjct: 492 D--TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNC-DFISGAR---KLFEGLAVKDTVSWNSLISGYE 234
+ S E + M+ Y +++ R ++ EG + +L+
Sbjct: 550 SDM--KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 235 KC---GGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
KC G+ + LF + G PD V S+L +R + + + + G
Sbjct: 608 KCRALAGSERAFTLFKKH---GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 292 NTAVGTSLISMYANCGSFLCAHRAFNEI------PDKSLASWTVMVTGFGIHGKGREAIS 345
+ SL+ MY G A + PD L S+ ++ GF G +EA+
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD--LVSYNTVIKGFCRRGLMQEAVR 722
Query: 346 IFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLL 405
+ +EM + I P + +S + G+ E +++ M ++ + P + +VD
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVVDGY 781
Query: 406 GRAGKLDEAYATIDNMK-LKPNEDVWTALLSACRLHRNVK 444
RAGK EA + +K P D + A R+ N++
Sbjct: 782 CRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVRENLE 821
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 140/344 (40%), Gaps = 16/344 (4%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARLVFDK----MPVRDLTSWNTMMSGYVKNGEAGDAF 140
+E V NSL++ +K + A +FD+ D ++N ++ G G+A A
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKAL 226
Query: 141 VVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT-NSMI 199
+ M G D T L+ G +L KA + SG + + + VT SMI
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQ--GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 200 DMYCNCDFISGARKLFEG---LAVKDT-VSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
YC + A L + L + T V++N L+ GY K G E+ G+M G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
PD VT S++ R+ + G + + +G N + LI+ N L A
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 316 FNEIPDKSLASWTVM----VTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
++ K + M + GF GK EA I EM K PD+ FT ++
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
G + E IF+KM P S L+ L +AG EAY
Sbjct: 465 KGRMFEAVSIFHKMVA-IGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 140/344 (40%), Gaps = 16/344 (4%)
Query: 85 LESDVYVGNSLISMYLKFGDMGTARLVFDK----MPVRDLTSWNTMMSGYVKNGEAGDAF 140
+E V NSL++ +K + A +FD+ D ++N ++ G G+A A
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKAL 226
Query: 141 VVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT-NSMI 199
+ M G D T L+ G +L KA + SG + + + VT SMI
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQ--GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 200 DMYCNCDFISGARKLFEG---LAVKDT-VSWNSLISGYEKCGGAFQVLELFGQMFIGGAV 255
YC + A L + L + T V++N L+ GY K G E+ G+M G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 256 PDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRA 315
PD VT S++ R+ + G + + +G N + LI+ N L A
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 316 FNEIPDKSLASWTVM----VTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSH 371
++ K + M + GF GK EA I EM K PD+ FT ++
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 372 SGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAY 415
G + E IF+KM P S L+ L +AG EAY
Sbjct: 465 KGRMFEAVSIFHKMVA-IGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 160/362 (44%), Gaps = 19/362 (5%)
Query: 91 VGNSLISMYLKFGDMGTARLVFDKMPV----RDLTSWNTMMSGYVKNGEAGDAFVVFDHM 146
+ +++IS ++G + A+ +F+ + +++ ++S Y ++G +A VF+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 147 RRSGLVGDGTTMLALLSACGDL-MDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
+ GL + T A++ ACG M+ K + RN + + NS++ +
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG--VQPDRITFNSLLAVCSRG 352
Query: 206 DFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTV 261
AR LF+ + + D S+N+L+ K G E+ QM + +P+ V+
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 262 ISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD 321
+V+ ++ ++ + G ++ +L+S+Y G A E+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 322 ----KSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDE 377
K + ++ ++ G+G GK E +F EM +++ P+ ++ ++ S GL E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 378 GKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALL 434
EIF + + + YS L+D L + G + A + ID M + PN + +++
Sbjct: 533 AMEIFREF-KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 435 SA 436
A
Sbjct: 592 DA 593
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 193/474 (40%), Gaps = 98/474 (20%)
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV----RDLTSWNTMMSGY 130
R+ G + VY ++LIS Y + G A VF+ M +L ++N ++
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC 313
Query: 131 VKNG-EAGDAFVVFDHMRRSGLVGDGTTMLALLSAC--GDLMDLKLGKAVHGYVVRNSGR 187
K G E FD M+R+G+ D T +LL+ C G L + A + + + R
Sbjct: 314 GKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE----AARNLFDEMTNRR 369
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVL 243
+ + F N+++D C + A ++ + VK + VS++++I G+ K G + L
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRI----SALLLGSSVHSYLVKK----------GY 289
LFG+M G D V+ ++L +++ AL + + S +KK GY
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 290 GM---------------------NTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS-- 326
G N ++LI Y+ G + A F E L +
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 327 --WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVD-------- 376
++ ++ +G A+S+ +EM + I+P+ + +++ A S +D
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG 609
Query: 377 ----------------EGK---EIFYKMTRDYNVEPTT------THYSCLVDLLGRAGKL 411
EG ++F ++T + N T SC++
Sbjct: 610 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL--------- 660
Query: 412 DEAYATIDNMKLKPNEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSGYV 465
E + + +++KPN ++A+L+AC + + A + ++L D NKV G V
Sbjct: 661 -EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD-NKVYGVV 712
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 163/395 (41%), Gaps = 47/395 (11%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N +N++I AC GG + + EM G + D T+ +L C L E
Sbjct: 302 NLVTYNAVID--ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGY 130
+ + +E DV+ N+L+ K G M A + +MPV+ ++ S++T++ G+
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 131 VKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGY-VVRNSGRLS 189
K G +A +F MR G+ D + LLS + K+G++ ++R +
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS-----IYTKVGRSEEALDILREMASVG 474
Query: 190 -NNEFVT-NSMIDMYCNCDFISGARKLFEGL----AVKDTVSWNSLISGYEKCGGAFQVL 243
+ VT N+++ Y +K+F + + + +++++LI GY K G + +
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH--SYLVKKGYGMNTAVGTSLIS 301
E+F + G D V +++ A + L+GS+V + K+G N S+I
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNG--LVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 302 M------------YANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREA------ 343
Y+N GS + A + + + + R
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG 652
Query: 344 -------ISIFNEMLGKNITPDEGVFTAVLSACSH 371
+ +F +M I P+ F+A+L+ACS
Sbjct: 653 MQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 162/384 (42%), Gaps = 53/384 (13%)
Query: 87 SDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVV 142
++V+V N+++S K G A + KM R ++ S+N +M G+ + A +V
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 143 FDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMY 202
F ++ GL + T L+ C D + V ++ S + N V ++I+
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT--SSNIEVNGVVYQTIINGL 558
Query: 203 CNCDFISGARKLFEGLAVKDTV-----SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPD 257
C S AR+L + + + S+NS+I G+ K G + + +M G P+
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 258 EVTVISVL------------------------------------GACSRISALLLGSSVH 281
+T S++ G C R S + S++
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR-SNMESASALF 677
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIH 337
S L+++G + + SLIS + N G+ + A + ++ L ++T ++ G
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTH 397
G A ++ EM + PDE ++T +++ S G + ++F +M ++ NV P
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN-NVTPNVLI 796
Query: 398 YSCLVDLLGRAGKLDEAYATIDNM 421
Y+ ++ R G LDEA+ D M
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEM 820
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 53/390 (13%)
Query: 40 VLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMY 99
+++ +L G K +N+TY ++ C + + V + +E + V ++I+
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Query: 100 LKFGDMGTAR-----LVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGD 154
K G AR ++ +K S+N+++ G+ K GE A ++ M +G+ +
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 155 GTTMLALLSAC--GDLMDLKLGKAVHGYVVRNSG-RLSNNEFVTNSMIDMYCNCDFISGA 211
T +L++ + MD L ++N G +L + ++ID +C + A
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDE---MKNKGVKLDIPAY--GALIDGFCKRSNMESA 673
Query: 212 RKLF-----EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLG 266
LF EGL + +NSLISG+ G L+L+ +M G D T +++
Sbjct: 674 SALFSELLEEGLNPSQPI-YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 267 ACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS 326
+ L+L S +++ + AVG +PD+ +
Sbjct: 733 GLLKDGNLILASELYTEM--------QAVGL---------------------VPDEII-- 761
Query: 327 WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMT 386
+TV+V G G+ + + +F EM N+TP+ ++ AV++ G +DE + +M
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 387 RDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
D + P + LV G+ G L A
Sbjct: 822 -DKGILPDGATFDILVS--GQVGNLQPVRA 848
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 186/455 (40%), Gaps = 56/455 (12%)
Query: 36 SRSLVLYREMLSFGQKADNFTYPFVLKAC--------GDLLLREM--------------- 72
+ +L + + G + D+ Y ++AC + LLREM
Sbjct: 250 AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTS 309
Query: 73 -------------GIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM---- 115
IR+ ++ DG+ +V SLI+ + K D+ +A ++FDKM
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG 369
Query: 116 PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
P + +++ ++ + KNGE A + M GL + ++ G L K +
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ--GWLKGQKHEE 427
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLIS 231
A+ + L+ N FV N+++ C A +L + + + VS+N+++
Sbjct: 428 ALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGM 291
G+ + +F + G P+ T ++ C R V +++ +
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 292 NTAVGTSLISMYANCGSFLCAHRAF-NEIPDKSLA----SWTVMVTGFGIHGKGREAISI 346
N V ++I+ G A N I +K L S+ ++ GF G+ A++
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 347 FNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLG 406
+ EM G I+P+ +T++++ + +D+ E+ +M ++ V+ Y L+D
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNKGVKLDIPAYGALIDGFC 665
Query: 407 RAGKLDEAYATIDNM---KLKPNEDVWTALLSACR 438
+ ++ A A + L P++ ++ +L+S R
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 126/291 (43%), Gaps = 13/291 (4%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
+N MI Y + S S LY EM S K + TY ++ A L E +
Sbjct: 289 YNLMINLYG---KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNG 134
+ DGLE DVYV N+L+ Y + G A +F M D S+N M+ Y + G
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
DA VF+ M+R G+ + + LLSA D+ +A+ + N + + FV
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG--VEPDTFV 463
Query: 195 TNSMIDMYCNCDFISGARKLF----EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
NSM+++Y + K+ G D ++N LI+ Y K G ++ ELF ++
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 251 IGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLIS 301
PD VT S +GA SR + V ++ G + L+S
Sbjct: 524 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 574
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
C R+ P+ + ++T +V F G +A IF ++ + PD V+ A++ + S
Sbjct: 310 CEMRSHQCKPN--ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNE 427
+G EIF + + EP Y+ +VD GRAG +A A + MK + P
Sbjct: 368 RAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFE 455
LLSA R+V E +++ E
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 110/281 (39%), Gaps = 10/281 (3%)
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
++ ++ +++ + + G A +F+ ++ GL D AL+ + G A
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR-AGYPYGAAEI 378
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG---LAVKDTV-SWNSLISGYE 234
++++ G + N M+D Y S A +FE L + T+ S L+S Y
Sbjct: 379 FSLMQHMG-CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
K + + +M G PD + S+L R+ + + + + +
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 295 VGTSLISMYANCGSFLCAHRAFNEIPDKS----LASWTVMVTGFGIHGKGREAISIFNEM 350
LI++Y G F E+ +K+ + +WT + + + + +F EM
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
+ PD G +LSACS V++ + M + V
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTV 598
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 170/408 (41%), Gaps = 41/408 (10%)
Query: 85 LESDVYVGN--------SLISMYLKFGDMGTARLVFDKM----PVRDLTSWNTMMSGYVK 132
LE+ VY GN +LI + + G A + + + V D+ ++N M+SGY K
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
GE +A V D M S V T+L L G L K + R R +
Sbjct: 185 AGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL------KQAMEVLDRMLQRDCYPD 238
Query: 193 FVTNS-MIDMYCNCDFISGARKLFEGL----AVKDTVSWNSLISGYEKCGGAFQVLELFG 247
+T + +I+ C + A KL + + D V++N L++G K G + ++
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
M G P+ +T +L + + + + +++KG+ + LI+ G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 308 SFLCAHRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
A ++P S+ ++ GF K AI M+ + PD +
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK- 422
+L+A G V++ EI +++ P Y+ ++D L +AGK +A +D M+
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 423 --LKPNEDVWTALLSACRLHRNVKLAEISAQKLFE------MDPNKVS 462
LKP+ +++L+ L R K+ E A K F + PN V+
Sbjct: 478 KDLKPDTITYSSLVGG--LSREGKVDE--AIKFFHEFERMGIRPNAVT 521
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
+N MI GY C AG +++ S VL R +S D TY +L++ D + + V
Sbjct: 175 YNVMISGY-CKAGEINNALS-VLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNG 134
++ DV LI + +G A + D+M R D+ ++N +++G K G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 135 EAGDAFVVFDHMRRSGLVGDGTT---MLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNN 191
+A + M SG + T +L + + G MD + + ++R S +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD---AEKLLADMLRKG--FSPS 343
Query: 192 EFVTNSMIDMYCNCDFISGARKLFEGLAV----KDTVSWNSLISGYEKCGGAFQVLELFG 247
N +I+ C + A + E + +++S+N L+ G+ K + +E
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+M G PD VT ++L A + + + + L KG C
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-----------------CS 446
Query: 308 SFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
L ++ ++ G GK +AI + +EM K++ PD +++++
Sbjct: 447 PVL--------------ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA---YATIDNMKLK 424
S G VDE + F++ R + P ++ ++ L ++ + D A + N K
Sbjct: 493 GLSREGKVDEAIKFFHEFER-MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 425 PNEDVWTALL 434
PNE +T L+
Sbjct: 552 PNETSYTILI 561
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 174/410 (42%), Gaps = 42/410 (10%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
++S+I G+ C G S LY +M+ G D Y ++ L + G+ +H
Sbjct: 429 YSSLIDGF-CKCGNLRSG--FALYEDMIKMGYPPDVVIYGVLVDG-----LSKQGLMLHA 480
Query: 79 L-----VVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV----RDLTSWNTMMSG 129
+ ++ + +V V NSLI + + A VF M + D+ ++ T+M
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLS 189
+ G +A +F M + GL D L+ A M +G + + RN ++S
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN--KIS 598
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLF----EGLAVKDTVSWNSLISGY---EKCGGAFQV 242
+ V N +I + C I A K F EG D V++N++I GY + A ++
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 243 LELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISM 302
EL G P+ VT+ ++ + + + + S + +KG N L+
Sbjct: 659 FELLKVTPFG---PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 303 YANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPD 358
++ + + F E+ +K S+ S+++++ G G+ EA +IF++ + + PD
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 359 EGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRA 408
+ ++ G + E ++ M R+ V+P DLL RA
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKPD--------DLLQRA 816
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 192/466 (41%), Gaps = 53/466 (11%)
Query: 6 LIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACG 65
L+ D N + ++I G+ C G R+ L++ M G + D Y ++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGF-CKRG--EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLT 121
+ MG ++ + G++ DV V +S I +Y+K GD+ TA +V+ +M + ++
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA---CGDLMD-------- 170
++ ++ G ++G +AF ++ + + G+ T +L+ CG+L
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 171 LKLGK----AVHGYVVRNSGR------------------LSNNEFVTNSMIDMYCNCDFI 208
+K+G ++G +V + + N V NS+ID +C +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 209 SGARKLFEGLAV----KDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISV 264
A K+F + + D ++ +++ G + L LF +MF G PD + ++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 265 LGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI----- 319
+ A + +G + + + + AV +I + C A + FN +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 320 -PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
PD + ++ M+ G+ + EA IF + P+ T ++ + +D
Sbjct: 633 EPD--IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 379 KEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
+F M + +P Y CL+D ++ ++ ++ + M+ K
Sbjct: 691 IRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 180/424 (42%), Gaps = 47/424 (11%)
Query: 38 SLVLYREMLSFGQKADNFTYPFVLKA-CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLI 96
+L +Y +M+SF D FT V+ A C + + + GLE +V NSLI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 97 SMYLKFGDMG----TARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
+ Y GD+ RL+ ++ R++ ++ +++ GY K G +A VF+ ++ LV
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
D L+ ++ VH ++ R N + NS+I+ YC + A
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVR--TNTTICNSLINGYCKSGQLVEAE 386
Query: 213 KLFEGL---AVK-DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
++F + ++K D ++N+L+ GY + G + L+L QM VP +T +L
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 269 SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT 328
SRI A S+ ++K+G + ++L+ G F
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF------------------- 487
Query: 329 VMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRD 388
EA+ ++ +L + + D ++S V+E KEI +
Sbjct: 488 ------------NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN-I 534
Query: 389 YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTALLSACRLHRNV-K 444
+ +P Y L + G L EA+A + M+ K P +++ L+S +R++ K
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 445 LAEI 448
+A++
Sbjct: 595 VADL 598
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 37/435 (8%)
Query: 7 IFDQI----VFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLS-FGQKADNFTYPFVL 61
++DQ+ V + F + ++ Y C +G + +++V +E S G + + TY ++
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAY-CRSG--NVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 62 KACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFD----KMPV 117
+ E RV L+ G+ +V SLI Y K G M A VF+ K V
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 118 RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAV 177
D + +M GY + G+ DA V D+M G+ + T +L++ G +L +A
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN--GYCKSGQLVEAE 386
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTV----SWNSLISGY 233
+ N L + N+++D YC ++ A KL + + K+ V ++N L+ GY
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 234 EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNT 293
+ G VL L+ M G DE++ ++L A ++ + ++ +G +T
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 294 AVGTSLISMYANCGSFLCAHRAFNEIPD-----------KSLASWTVMVTGFGIHGKGRE 342
+IS LC NE + ++ ++ + G+ G +E
Sbjct: 507 ITLNVMISG-------LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 343 AISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLV 402
A ++ M K I P ++ ++S +++ ++ ++ R + PT Y L+
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL-RARGLTPTVATYGALI 618
Query: 403 DLLGRAGKLDEAYAT 417
G +D+AYAT
Sbjct: 619 TGWCNIGMIDKAYAT 633
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 212/511 (41%), Gaps = 90/511 (17%)
Query: 5 QLIFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLKA 63
+L+ ++ V +N + S+I+GY C G + + E+L + AD Y ++
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGY-CKKGLMEEAEHVF---ELLKEKKLVADQHMYGVLMDG 340
Query: 64 -CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM------P 116
C +R+ +RVH ++ G+ ++ + NSLI+ Y K G + A +F +M P
Sbjct: 341 YCRTGQIRD-AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 117 VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALL---SACGDLMD-LK 172
D ++NT++ GY + G +A + D M + +V T LL S G D L
Sbjct: 400 --DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 173 LGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNS 228
L K + V + +E +++++ + A KL+E + + DT++ N
Sbjct: 458 LWKMMLKRGV------NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 229 LISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKG 288
+ISG K + E+ + I P T ++ ++ L +V Y+ +KG
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 289 YGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD-----------KSLASWTVMVTGFGIH 337
+ +LIS G+F +R N++ D ++A++ ++TG+
Sbjct: 572 IFPTIEMYNTLIS-----GAF--KYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624
Query: 338 GKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYN------- 390
G +A + EM+ K IT + + + + ++ +DE + K+ D++
Sbjct: 625 GMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV-DFDLLLPGYQ 683
Query: 391 ----------------------VE---------PTTTHYSCLVDLLGRAGKLDEAYATID 419
VE P Y+ + L +AGKL++A
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 420 NM----KLKPNEDVWTALLSACRLHRNVKLA 446
++ + P+E +T L+ C + ++ A
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 59/316 (18%)
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK---AV 177
T ++ ++ Y + G +A VFD+M G + + +LLS ++ G+ A+
Sbjct: 156 TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSN-----LVRKGENFVAL 210
Query: 178 HGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISG----ARKLFEGLAVK-DTVSWNSLISG 232
H Y S +S + F + +++ YC + A++ L ++ + V++NSLI+G
Sbjct: 211 HVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLING 270
Query: 233 YEKCG---GAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGY 289
Y G G +VL L + +G
Sbjct: 271 YAMIGDVEGMTRVLRLMSE--------------------------------------RGV 292
Query: 290 GMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS----WTVMVTGFGIHGKGREAIS 345
N TSLI Y G A F + +K L + + V++ G+ G+ R+A+
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 346 IFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLL 405
+ + M+ + + + ++++ SG + E ++IF +M D++++P Y+ LVD
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN-DWSLKPDHHTYNTLVDGY 411
Query: 406 GRAGKLDEAYATIDNM 421
RAG +DEA D M
Sbjct: 412 CRAGYVDEALKLCDQM 427
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 148/347 (42%), Gaps = 22/347 (6%)
Query: 91 VGNSLISMYLKFGDMGTARLVFDKM----PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHM 146
V + ++ +Y + G + A VFD M + L S N+++S V+ GE A V+D M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 147 RRSGLVGDGTTMLALLSA---CGDLMDLKLGKA-VHGYVVRNSGRLSNNEFVTNSMIDMY 202
+ D T +++A G+ + KA V +S L N NS+I+ Y
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGN-----VDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 203 CNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDE 258
+ G ++ ++ ++ V++ SLI GY K G + +F + V D+
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 259 VTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE 318
++ R + VH +++ G NT + SLI+ Y G + A + F+
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 319 IPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGL 374
+ D SL ++ +V G+ G EA+ + ++M K + P + +L S G
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 375 VDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ + +KM V S L++ L + G +EA +N+
Sbjct: 452 FHDVLSL-WKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 10 QIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQ-KADNFTYPFVLKAC---G 65
+++ N+ ++N I G C AG +R L + ++LS + D +TY ++ C G
Sbjct: 713 KLLVPNNIVYNVAIAGL-CKAGKLEDARKL--FSDLLSSDRFIPDEYTYTILIHGCAIAG 769
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT---- 121
D+ + + + G+ ++ N+LI K G++ A+ + K+P + +T
Sbjct: 770 DI---NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
++NT++ G VK+G +A + + M GLV
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 117/260 (45%), Gaps = 13/260 (5%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHG 78
+N MI Y + S S LY EM S K + TY ++ A L E +
Sbjct: 267 YNLMINLYG---KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 79 LVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNG 134
+ DGLE DVYV N+L+ Y + G A +F M D S+N M+ Y + G
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
DA VF+ M+R G+ + + LLSA D+ +A+ + N + + FV
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG--VEPDTFV 441
Query: 195 TNSMIDMYCNCDFISGARKLF----EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMF 250
NSM+++Y + K+ G D ++N LI+ Y K G ++ ELF ++
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 251 IGGAVPDEVTVISVLGACSR 270
PD VT S +GA SR
Sbjct: 502 EKNFRPDVVTWTSRIGAYSR 521
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 311 CAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACS 370
C R+ P+ + ++T +V F G +A IF ++ + PD V+ A++ + S
Sbjct: 288 CEMRSHQCKPN--ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 345
Query: 371 HSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNE 427
+G EIF + + EP Y+ +VD GRAG +A A + MK + P
Sbjct: 346 RAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 428 DVWTALLSACRLHRNVKLAEISAQKLFE 455
LLSA R+V E +++ E
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 110/281 (39%), Gaps = 10/281 (3%)
Query: 119 DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVH 178
++ ++ +++ + + G A +F+ ++ GL D AL+ + G A
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR-AGYPYGAAEI 356
Query: 179 GYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEG---LAVKDTV-SWNSLISGYE 234
++++ G + N M+D Y S A +FE L + T+ S L+S Y
Sbjct: 357 FSLMQHMG-CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 235 KCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTA 294
K + + +M G PD + S+L R+ + + + + +
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 295 VGTSLISMYANCGSFLCAHRAFNEIPDKS----LASWTVMVTGFGIHGKGREAISIFNEM 350
LI++Y G F E+ +K+ + +WT + + + + +F EM
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 351 LGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
+ PD G +LSACS V++ + M + V
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTV 576
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 14/224 (6%)
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
+TV++N LI Y + + + +F QM G PD VT +++ ++ L + ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIH 337
+ G +T + +I+ G AH+ F E+ D+ +L ++ +M+ +H
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LH 514
Query: 338 GKGR---EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
K R A+ ++ +M PD+ ++ V+ H G ++E + +F +M + N P
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPD 573
Query: 395 TTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLS 435
Y LVDL G+AG +++A Y + + L+PN +LLS
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 162/368 (44%), Gaps = 22/368 (5%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N +N+M+ + C +RS+ + EML G + +NFTY ++ +
Sbjct: 483 NVVFYNNMMLAH-CRMKNMDLARSI--FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTAR-----LVFDKMPVRDLTSWNTMMSG 129
V + E++ + N++I+ K G A+ L+ +K TS+N+++ G
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 130 YVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSA-C-GDLMDLKLGKAVHGYVVRNSGR 187
+VK G+ A + M +G + T +L++ C + MDL L + H S
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLAL-EMTHEM---KSME 655
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKCGGAFQVL 243
L + ++ID +C + + A LF L + + +NSLISG+ G +
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
+L+ +M G D T +++ + + L S ++S L+ G + + L++
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Query: 304 ANCGSFLCAHRAFNEIPDKSLAS----WTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
+ G FL A + E+ K + ++ ++ G G EA + +EML K I D+
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDD 835
Query: 360 GVFTAVLS 367
VF ++S
Sbjct: 836 TVFNLLVS 843
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 172/425 (40%), Gaps = 92/425 (21%)
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT----SWNTMMSGYVKNGEAGDA 139
G+E +V N+++ + + +M AR +F +M + L +++ ++ G+ KN + +A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 140 FVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMI 199
+ V + M N+ NE + N++I
Sbjct: 539 WDVINQM-------------------------------------NASNFEANEVIYNTII 561
Query: 200 DMYCNCDFISGARKLFEGLAVKDT------VSWNSLISGYEKCGGAFQVLELFGQMFIGG 253
+ C S A+++ + L +K+ S+NS+I G+ K G +E + +M G
Sbjct: 562 NGLCKVGQTSKAKEMLQNL-IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 254 AVPDEVTVISVL------------------------------------GACSRISALLLG 277
P+ VT S++ G C + + +
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKK-NDMKTA 679
Query: 278 SSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA----SWTVMVTG 333
++ S L + G N +V SLIS + N G A + ++ + ++ ++T M+ G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 334 FGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEP 393
G A +++E+L I PDE + +++ S G + ++ +M + +V P
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK-DVTP 798
Query: 394 TTTHYSCLVDLLGRAGKLDEAYATIDNMKLK--PNEDVWTALLSACRLHRNVKLAEISAQ 451
YS ++ R G L+EA+ D M K ++D LL + R+ + ++IS+
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSL 858
Query: 452 KLFEM 456
EM
Sbjct: 859 ASPEM 863
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 172/426 (40%), Gaps = 71/426 (16%)
Query: 41 LYREMLSFGQKADNFTYPFVLKAC---GDL-----LLREMGIRVHGLVVVDGLESDVYVG 92
++R ++S G + D + ++A DL LLREM ++ G+ +
Sbjct: 261 IFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL-------GVPASQETY 313
Query: 93 NSLISMYLKFGDMGTARLVFDKM-----PVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMR 147
S+I ++K G+M A V D+M P+ + + ++++GY K E G A +F+ M
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPM-SVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 148 RSGLVGDGTTMLALLS-ACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD 206
GL D ++ C ++ ++ KA+ Y+ S R++ + + ++MI +
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNM---EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 207 FISGARKLFEGLAVKDTVSW-------NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEV 259
A ++F SW N + + K G M G P+ V
Sbjct: 430 SPEAALEIFND----SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVV 485
Query: 260 TVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI 319
+++ A R+ + L S+ S +++KG N
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF------------------------- 520
Query: 320 PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
++++++ GF + + A + N+M N +E ++ +++ G + K
Sbjct: 521 ------TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 380 EIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSA 436
E+ + ++ + T Y+ ++D + G D A T M PN +T+L++
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 437 -CRLHR 441
C+ +R
Sbjct: 635 FCKSNR 640
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 14/224 (6%)
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
+TV++N LI Y + + + +F QM G PD VT +++ ++ L + ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIH 337
+ G +T + +I+ G AH+ F E+ D+ +L ++ +M+ +H
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LH 514
Query: 338 GKGR---EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
K R A+ ++ +M PD+ ++ V+ H G ++E + +F +M + N P
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPD 573
Query: 395 TTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLS 435
Y LVDL G+AG +++A Y + + L+PN +LLS
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 14/224 (6%)
Query: 222 DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVH 281
+TV++N LI Y + + + +F QM G PD VT +++ ++ L + ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 282 SYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK----SLASWTVMVTGFGIH 337
+ G +T + +I+ G AH+ F E+ D+ +L ++ +M+ +H
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LH 514
Query: 338 GKGR---EAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
K R A+ ++ +M PD+ ++ V+ H G ++E + +F +M + N P
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPD 573
Query: 395 TTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLS 435
Y LVDL G+AG +++A Y + + L+PN +LLS
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 164/379 (43%), Gaps = 68/379 (17%)
Query: 80 VVVDGLESDVYVGNSLISMYL----KFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGE 135
V + L + +Y S ++Y+ FG + AR + M D+ S+NT+M GY+K G+
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGK 389
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT 195
+A ++FD +R GD +H +V
Sbjct: 390 FVEASLLFDDLR-----------------AGD---------IHPSIV-----------TY 412
Query: 196 NSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
N++ID C + GA++L E + + D +++ +L+ G+ K G E++ +M
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSS-----VHSYLVKKG-YGMNTAVGTSLISMYAN 305
G PD + + L LG S +H +V + + + I
Sbjct: 473 KGIKPDGYAYTT-----RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 306 CGSFLCAHRAFNEI------PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
G+ + A +I PD ++T ++ G+ +G+ + A ++++EML K + P
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDH--VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
+ ++ + +G +++ + +M + V P ++ L+ + +AG +DEAY +
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKR-GVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 420 NMK---LKPNEDVWTALLS 435
M+ + PN+ +T L+S
Sbjct: 645 KMEEEGIPPNKYSYTMLIS 663
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 133/309 (43%), Gaps = 26/309 (8%)
Query: 71 EMGIRVHGLVVVDGLES-----DVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLT 121
+MG V ++ D L + + N+LI + G++ A+ + ++M + D+
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 445
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYV 181
++ T++ G+VKNG A V+D M R G+ DG A G+L +LG + +
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGEL---RLGDSDKAFR 500
Query: 182 VRNSGRLSNNE----FVTNSMIDMYCNC----DFISGARKLFEGLAVKDTVSWNSLISGY 233
+ +++ + N ID C I RK+F V D V++ ++I GY
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 234 EKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNT 293
+ G L+ +M P +T ++ ++ L + + K+G N
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 294 AVGTSLISMYANCGSFLCAHRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNE 349
+L+ G+ A+R ++ ++ + S+T++++ K E + ++ E
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
Query: 350 MLGKNITPD 358
ML K I PD
Sbjct: 681 MLDKEIEPD 689
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 164/357 (45%), Gaps = 19/357 (5%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTA-RLVFDKMPVRDLTSWNTMMSGYVKNG 134
++ ++ G+ DV+ N LI + K G + A L+ +++ D ++NT++SG ++G
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHG 175
Query: 135 EAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFV 194
A +A+ M + G++ D + L+ + + KA+ +S +
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL-------VDEISELNLI 228
Query: 195 TNS-MIDMYCNCDFISGA-RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
T++ ++ Y N I A R + D V+++S+I+ K G + L +M
Sbjct: 229 THTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 288
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
P+ VT +++ + + + +++S +V +G ++ V T L+ G A
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Query: 313 HRAF------NEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVL 366
+ F N++P+ + ++T +V G G A I +ML K++ P+ +++++
Sbjct: 349 EKTFKMLLEDNQVPN--VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 367 SACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL 423
+ G+++E + KM D NV P Y ++D L +AGK + A M+L
Sbjct: 407 NGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 193/482 (40%), Gaps = 93/482 (19%)
Query: 9 DQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLL 68
DQ V N F + ++I G AG ++ L +EM G + +N+ +L A + L
Sbjct: 427 DQNVVPNGFTYGTVIDGL-FKAG--KEEMAIELSKEMRLIGVEENNY----ILDALVNHL 479
Query: 69 LREMGIR-VHGLV---VVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DL 120
R I+ V GLV V G+ D SLI ++ K GD A ++M R D+
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539
Query: 121 TSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL----------------VGDGTTMLAL--- 161
S+N ++SG +K G+ G + + MR G+ GD +L L
Sbjct: 540 VSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 598
Query: 162 LSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCD------FISGARK-- 213
+ +CG L V G + N G++ + N M+ M + + F+ + K
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCEN-GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 214 ------------LFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTV 261
L G+ + V +N+LI+ K G + + G M G +PD VT
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQV-YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT- 715
Query: 262 ISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPD 321
S +H Y V G + A+ T + M A
Sbjct: 716 --------------FNSLMHGYFV--GSHVRKALSTYSVMMEAGISP------------- 746
Query: 322 KSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEI 381
++A++ ++ G G +E +EM + + PD+ + A++S + G + I
Sbjct: 747 -NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 382 FYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKPNEDVWTALLSA-C 437
+ +M D + P T+ Y+ L+ GK+ +A + M + PN + ++S C
Sbjct: 806 YCEMIAD-GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Query: 438 RL 439
+L
Sbjct: 865 KL 866
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGAFQVLELF 246
+S + F N +I +C +S A L + DTV++N++ISG + G A + +
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFL 184
Query: 247 GQMFIGGAVPDEVTVISVL-GACS-----RISAL--------------LLGS--SVHSY- 283
+M G +PD V+ +++ G C R AL LL S ++H+
Sbjct: 185 SEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE 244
Query: 284 -----LVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSL----ASWTVMVTGF 334
+V G+ + +S+I+ G L E+ + S+ ++T +V
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 335 GIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPT 394
R A++++++M+ + I D V+T ++ +G + E ++ F KM + N P
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF-KMLLEDNQVPN 363
Query: 395 TTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTALLS 435
Y+ LVD L +AG L A I M K PN ++++++
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 176/432 (40%), Gaps = 53/432 (12%)
Query: 42 YREMLSFGQKADNFTYPFVL-KAC-------GDLLLREMGIRVHGLVVVDGLESDVYVGN 93
YR+M+ G D T+ ++ + C G LLLREM E VY +
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME------------EMSVYPNH 294
Query: 94 ----SLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDH 145
+L+ K A ++ +M VR DL + +M G K G+ +A F
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 146 MRRSGLVGDGTTMLAL---LSACGDLMDLK------LGKAVHGYVVRNSGRLSNNEFVTN 196
+ V + T AL L GDL + L K+V VV S + N +V
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI--NGYVKK 412
Query: 197 SMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
M++ + +S RK+ + V + ++ ++I G K G +EL +M + G
Sbjct: 413 GMLE-----EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
+ + +++ RI + + +V KG ++ TSLI ++ G A
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 317 NEIPDKSL----ASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
E+ ++ + S+ V+++G GK A + M K I PD F ++++
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN---MKLKPNEDV 429
G EG + + ++P+ + +V +L GK++EA ++ M++ PN
Sbjct: 587 G-DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 430 WTALLSACRLHR 441
+ L H+
Sbjct: 646 YRIFLDTSSKHK 657
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 167/446 (37%), Gaps = 75/446 (16%)
Query: 12 VFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA---CGDL- 67
V +S LWNS+I + + G + ++Y +M++ G D F ++ + G L
Sbjct: 89 VVPDSRLWNSLIHQF--NVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 146
Query: 68 ----LLREMGIRV--------------HGL----------VVVDGLESDVYVGNSLISMY 99
LLR I + HGL +V G+ D N+LI +
Sbjct: 147 FAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 206
Query: 100 LKFGDMGTARLVFDKMPVRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTML 159
K G+ A+ + D++ +L + ++S Y +A + M SG D T
Sbjct: 207 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFS 263
Query: 160 ALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA 219
++++ K GK + G ++ R++ E
Sbjct: 264 SIINRL-----CKGGKVLEGGLL----------------------------LREMEEMSV 290
Query: 220 VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSS 279
+ V++ +L+ K L L+ QM + G D V ++ + L
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 280 VHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKS----LASWTVMVTGFG 335
L++ N T+L+ G A ++ +KS + +++ M+ G+
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 336 IHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTT 395
G EA+S+ +M +N+ P+ + V+ +G + E+ +M R VE
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM-RLIGVEENN 469
Query: 396 THYSCLVDLLGRAGKLDEAYATIDNM 421
LV+ L R G++ E + +M
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDM 495
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 186/430 (43%), Gaps = 43/430 (10%)
Query: 33 NSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIR----VHGLVVVDGLESD 88
N + V Y +M K++ +T+ ++ ++L +E ++ G++ V G++
Sbjct: 204 NRIENAWVFYADMYRMEIKSNVYTFNIMI----NVLCKEGKLKKAKGFLGIMEVFGIKPT 259
Query: 89 VYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFD 144
+ N+L+ + G + ARL+ +M + D+ ++N ++S G A + V
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLR 316
Query: 145 HMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCN 204
M+ GLV D + L+ C + DL++ A +V+ + + N++I
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG--MVPTFYTYNTLIHGLFM 374
Query: 205 CDFISGA----RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVT 260
+ I A R++ E V D+V++N LI+GY + G A + L +M G P + T
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 261 VISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP 320
S++ R + + +V KG + + +L+ + G+ RAF+ +
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM---DRAFSLLK 491
Query: 321 DKSLAS-------WTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSG 373
+ + S + ++ G GK EA + EM + I PD + ++S S G
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 374 LVDEGKEIFYKMTRD----YNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LKPN 426
+ K F M RD PT Y+ L+ L + + + A + MK + PN
Sbjct: 552 ---DTKHAF--MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 427 EDVWTALLSA 436
+ + +++ A
Sbjct: 607 DSSFCSVIEA 616
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 74/371 (19%)
Query: 23 IRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC---GDLLLREMGIRVHGL 79
I + C+ G R+ + REM G D+ +Y +++ C GDL EM
Sbjct: 301 ILSWMCNEG-----RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL---EMAFAYRDE 352
Query: 80 VVVDGLESDVYVGNSLISMYLKFGDMGTA----RLVFDKMPVRDLTSWNTMMSGYVKNGE 135
+V G+ Y N+LI + A R + +K V D ++N +++GY ++G+
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALL---------SACGDLMDLKLGKAVHGYVVRNSG 186
A AF + D M G+ T +L+ +L + +GK + +V
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV---- 468
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAV----KDTVSWNSLISGYEKCG-GAF- 240
+ N+++D +C + A L + + + D V++N L+ G CG G F
Sbjct: 469 -------MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL--CGEGKFE 519
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
+ EL G+M G PD ++ +++ S+ G + H+++V+ ++
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSK-----KGDTKHAFMVRD----------EML 564
Query: 301 SMYANCGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEG 360
S+ FN +L ++ ++ G + +G A + EM + I P++
Sbjct: 565 SL------------GFN----PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Query: 361 VFTAVLSACSH 371
F +V+ A S+
Sbjct: 609 SFCSVIEAMSN 619
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 181/419 (43%), Gaps = 30/419 (7%)
Query: 41 LYREMLSFG---QKADNFTYPFVL-KACGDLLLREMGI---RVHGLVVVDGLESDVYVGN 93
+ RE L F +K+ N PF K L+ GI + +V G N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 94 SLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRS 149
S++S K G + A + MP D+ S+N+++ G+ +NG+ A +V + +R S
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 150 GLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFIS 209
+++ S +K+ V Y+ S N ++ ID +C +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 210 GARKLFEGLA----VKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVL 265
A K F + + V++ LI GY K G + L+ +M + VT +++
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 266 GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY------ANCGSFLCAHRAFNEI 319
+ + ++S +V+ N+ V T++I + N FL + N+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA--KMLNQG 298
Query: 320 PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGK 379
+ ++ V+++G +GK +EA I +M ++ PD +FT +++A SG +
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 380 EIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEA--YATIDNMKLKPNEDVWTALLSA 436
+++K+ + EP S ++D + + G+L EA Y I+ K N+ ++T L+ A
Sbjct: 359 NMYHKLI-ERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE----KANDVMYTVLIDA 412
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 149/382 (39%), Gaps = 51/382 (13%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGI 74
N + +I GY C AG + SL Y+EM + TY ++ +
Sbjct: 197 NVVTFTCLIDGY-CKAGDLEVAVSL--YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 75 RVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGY 130
++ +V D +E + V ++I + + GD A KM + D+T++ ++SG
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 131 VKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSN 190
NG+ +A + + M +S LV D +++A ++ AV+ Y
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY--FKSGRMKAAVNMYHKLIERGFEP 371
Query: 191 NEFVTNSMIDMYCNCDFISGARKLFEGLAV-----KDTVSWNSLISGYEKCGGAFQVLEL 245
+ ++MID I+ +L E + + V + LI K G +V L
Sbjct: 372 DVVALSTMIDG------IAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERL 425
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
F ++ G VPD+ S + + L+ + + +V++G ++
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD------------- 472
Query: 306 CGSFLCAHRAFNEIPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAV 365
L ++T ++ G G EA +F+EML I+PD VF +
Sbjct: 473 ------------------LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 366 LSACSHSGLVDEGKEIFYKMTR 387
+ A G + ++ M R
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQR 536
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 175/426 (41%), Gaps = 73/426 (17%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA-CGDLLLREMGIRVH 77
+NS++ G C +G +S +L L R+M KAD FTY ++ + C D + + I +
Sbjct: 196 YNSIVNGI-CRSG--DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI-DAAISLF 251
Query: 78 GLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRDLT----SWNTMMSGYVKN 133
+ G++S V NSL+ K G L+ M R++ ++N ++ +VK
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 134 GEAGDAFVVFDHMRRSGL---------VGDGTTMLALLSACGDLMDLKLGKAVHGYVVRN 184
G+ +A ++ M G+ + DG M LS +++DL +VRN
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL---------MVRN 362
Query: 185 SGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLA----VKDTVSWNSLISGYEKCGGAF 240
+ S + S+I YC + K+F ++ V + V+++ L+ G+ + G
Sbjct: 363 --KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 241 QVLELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLI 300
ELF +M G +PD +T YG+ L+
Sbjct: 421 LAEELFQEMVSHGVLPDVMT----------------------------YGI-------LL 445
Query: 301 SMYANCGSFLCAHRAFNEIP----DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNIT 356
+ G A F ++ D + +T ++ G GK +A ++F + K +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 357 PDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYA 416
P+ +T ++S G + E + KM D N P Y+ L+ R G L +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAK 564
Query: 417 TIDNMK 422
I+ MK
Sbjct: 565 LIEEMK 570
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 179/427 (41%), Gaps = 59/427 (13%)
Query: 82 VDGLESDVYVGNSLISMYLKFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGE 135
++G+ ++Y N +I+ + + A V K+ P D T++NT++ G G+
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP--DTTTFNTLIKGLFLEGK 173
Query: 136 AGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLG-KAVHGYVVRNSGRLSNNEFV 194
+A V+ D M +G D T ++++ D L + RN + + F
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFT 230
Query: 195 TNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCG----GA------- 239
+++ID C I A LF+ + K V++NSL+ G K G GA
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 240 ----------FQVL--------------ELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
F VL EL+ +M G P+ +T +++ + L
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLA----SWTVMV 331
+++ +V+ + TSLI Y + F I + L +++++V
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
GF GK + A +F EM+ + PD + +L +G +++ EIF + + +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KM 469
Query: 392 EPTTTHYSCLVDLLGRAGKLDEA---YATIDNMKLKPNEDVWTALLSACRLHRNVKLAEI 448
+ Y+ +++ + + GK+++A + ++ +KPN +T ++S ++ A I
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 449 SAQKLFE 455
+K+ E
Sbjct: 530 LLRKMEE 536
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 12/251 (4%)
Query: 207 FISGARKLFE----GLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVI 262
F+ A ++FE G D V++N++I GY K G + +E M G D++T +
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 263 SVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDK 322
+++ AC S +++ + +KG + + +I G + F + K
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 323 ----SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEG 378
++A +TV++ G+ G +AI + + M+ + PD ++ V++ +G V+E
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 379 KEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTALLS 435
+ F+ D + + YS L+D LG+AG++DEA + M K + + AL+
Sbjct: 417 LDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 436 ACRLHRNVKLA 446
A HR V A
Sbjct: 476 AFTKHRKVDEA 486
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 166/415 (40%), Gaps = 38/415 (9%)
Query: 60 VLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV-- 117
++K+ G L + E + V + +G+E +Y N L++ + + +A VF+ M
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 118 --RDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGK 175
D+ ++NTM+ GY K G+ A M G D T + ++ AC D G
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC--YADSDFGS 310
Query: 176 AVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLIS 231
V Y + + + +I C ++ +FE + K + + LI
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 232 GYEKCGGAFQVLELFGQMFIGGAVPDEVTV-ISVLGACS--RISALLLGSSVHSYLVKKG 288
GY K G + L +M G PD VT + V G C R+ L H+ G
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL--DYFHTCRF-DG 427
Query: 289 YGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLAS----WTVMVTGFGIHGKGREAI 344
+N+ +SLI G A R F E+ +K + ++ F H K EAI
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 345 SIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKE----IFYKMTRDYNVEPTTTHYSC 400
++F M + D+ V+T + SG+ E + + M D + PT +
Sbjct: 488 ALFKRMEEEEGC-DQTVYTYTILL---SGMFKEHRNEEALKLWDMMIDKGITPTAACFRA 543
Query: 401 LVDLLGRAGKLDEAYATIDNMKLKPN--------EDVWTALLSACRLHRNVKLAE 447
L L +GK+ A +D +L P ED+ L A R+ KLA+
Sbjct: 544 LSTGLCLSGKVARACKILD--ELAPMGVILDAACEDMINTLCKAGRIKEACKLAD 596
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 29/247 (11%)
Query: 19 WNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC---GDL-----LLR 70
+N+MI+GY C AG + +++ R+M + G +AD TY +++AC D L +
Sbjct: 260 YNTMIKGY-CKAG--QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 316
Query: 71 EMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTM 126
EM + G++ + + +I K G + VF+ M + ++ + +
Sbjct: 317 EMDEK--------GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 127 MSGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSG 186
+ GY K+G DA + M G D T +++ G + ++ +A+ +
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN--GLCKNGRVEEALDYFHTCRFD 426
Query: 187 RLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQV 242
L+ N +S+ID + A +LFE ++ K D+ +N+LI + K +
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 243 LELFGQM 249
+ LF +M
Sbjct: 487 IALFKRM 493
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 185/437 (42%), Gaps = 31/437 (7%)
Query: 20 NSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGL 79
+S++ GY G S ++ L +M+ G + D T+ ++ L L L
Sbjct: 159 SSLLNGYC---HGKRISDAVALVDQMVEMGYRPDTITFTTLIHG---LFLHNKASEAVAL 212
Query: 80 V---VVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVK 132
V V G + ++ +++ K GD A + +KM D+ +NT++ K
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
DA +F M G+ + T +L+S + ++ +++ N
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNL 330
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQ 248
N++ID + A KL++ + + D ++NSL++G+ + ++F
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 249 MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
M PD VT +++ + + G+ + + +G +T T+LI + G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 309 FLCAHRAFNEI------PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF 362
A + F ++ PD + ++++++ G +GK +A+ +F+ M I D ++
Sbjct: 451 CDNAQKVFKQMVSDGVPPD--IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 363 TAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK 422
T ++ +G VD+G ++F ++ V+P Y+ ++ L L EAYA + MK
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 423 LK---PNEDVWTALLSA 436
PN + L+ A
Sbjct: 568 EDGPLPNSGTYNTLIRA 584
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 169/409 (41%), Gaps = 39/409 (9%)
Query: 31 GGNSSSR---SLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLES 87
GG SR S+V + ++LS K F D+++ +G ++ L +V GL
Sbjct: 74 GGMVKSRPLPSIVEFNKLLSAIAKMKKF----------DVVI-SLGEKMQRLEIVHGL-- 120
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGEAGDAFV 141
Y N LI+ + + + A + KM P + + +++++GY DA
Sbjct: 121 --YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVA 176
Query: 142 VFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT-NSMID 200
+ D M G D T L+ G + K +AV V R R VT +++
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIH--GLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVN 233
Query: 201 MYC---NCDFISGARKLFEGLAVK-DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVP 256
C + D E ++ D V +N++I K L LF +M G P
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 257 DEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAF 316
+ VT S++ S + S +++K N +LI + G F+ A + +
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 317 NEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHS 372
+++ +S+ ++ +V GF +H + +A +F M+ K+ PD + ++ S
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
V++G E+F +M+ V T T Y+ L+ L G D A M
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQM 461
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 169/390 (43%), Gaps = 32/390 (8%)
Query: 88 DVYVGNSLISMYLKFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGEAGDAFV 141
D ++LIS Y K G +A +FD+M P + + T++ Y K G+ A
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI--YTTLLGIYFKVGKVEKALD 289
Query: 142 VFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDM 201
+F+ M+R+G T L+ G + + ++R+ L+ + N+++++
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG--LTPDVVFLNNLMNI 347
Query: 202 YCNCDFISGARKLFEGLAV----KDTVSWNSLISG-YEKCGGAFQVLELFGQMFIGGAVP 256
+ +F + + VS+N++I +E +V F +M P
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 257 DEVTV-ISVLGAC--SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAH 313
E T I + G C +R+ LL + + +KG+ A SLI+ + A+
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALL---LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 314 RAFNEIPDK----SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSAC 369
F E+ + S + VM+ FG GK EA+ +FNEM + PD + A++S
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 370 SHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAG---KLDEAYATIDNMKLKPN 426
+G+++E + KM + +H + +++ R G + E + TI + +KP+
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSH-NIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 427 EDVWTALLSACRLHRNVKLAEISAQKLFEM 456
+ LL C H + E +A+ + EM
Sbjct: 584 GVTYNTLL-GCFAH--AGMFEEAARMMREM 610
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 107/275 (38%), Gaps = 53/275 (19%)
Query: 216 EGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGACSRISALL 275
EG DT+++++LIS YEK G + LF +M P E
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTE----------------- 268
Query: 276 LGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIP----DKSLASWTVMV 331
+ T+L+ +Y G A F E+ ++ ++T ++
Sbjct: 269 ------------------KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 332 TGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYKMTRDYNV 391
G G G+ EA + +ML +TPD +++ G V+E +F +M +
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM-WRC 369
Query: 392 EPTTTHYSCLVD-LLGRAGKLDEAYATIDNMK---LKPNEDVWTALLSA-CRLHRNVKLA 446
PT Y+ ++ L + E + D MK + P+E ++ L+ C+ +R
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR----V 425
Query: 447 EISAQKLFEMD----PNKVSGYVCLSNIYAAEKRW 477
E + L EMD P + Y L N KR+
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 178/421 (42%), Gaps = 25/421 (5%)
Query: 17 FLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRV 76
F +N MI C G ++R L + EM G D TY ++ G + + +
Sbjct: 263 FTYNIMI-DCMCKEGDVEAARGL--FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 77 HGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVK 132
+ E DV N+LI+ + KFG + + +M ++ S++T++ + K
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR---LS 189
G A + MRR GLV + T +L+ A + K+G + + N +
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA-----NCKIGNLSDAFRLGNEMLQVGVE 434
Query: 190 NNEFVTNSMIDMYCNCDFISGARKLFEGL----AVKDTVSWNSLISGYEKCGGAFQVLEL 245
N ++ID C+ + + A +LF + + + S+N+LI G+ K + LEL
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 246 FGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYAN 305
++ G PD + + + + + V + + + G N+ + T+L+ Y
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 306 CGSFLCAHRAFNEIP----DKSLASWTVMVTGFGIHGKGREAISIFNEMLGK-NITPDEG 360
G+ +E+ + ++ ++ V++ G + +A+ FN + + +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 361 VFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDN 420
+FTA++ V+ +F +M + + P T Y+ L+D + G + EA A D
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 421 M 421
M
Sbjct: 674 M 674
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 148/367 (40%), Gaps = 51/367 (13%)
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDA 139
G V+ N +I K GD+ AR +F++M R D ++N+M+ G+ K G D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 140 FVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMI 199
F+ M+ D T AL++ L +G + + N +
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK------------ 364
Query: 200 DMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEV 259
+ VS+++L+ + K G Q ++ + M G VP+E
Sbjct: 365 ---------------------PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 260 TVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNE- 318
T S++ A +I L + + +++ G N T+LI + A F +
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 319 -----IPDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVF-TAVLSACSHS 372
IP+ LAS+ ++ GF A+ + NE+ G+ I PD ++ T + CS
Sbjct: 464 DTAGVIPN--LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 373 GLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLKPNEDVWTA 432
+ E ++ ++ ++ + Y+ L+D ++G E +D MK D+
Sbjct: 522 KI--EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK---ELDIEVT 576
Query: 433 LLSACRL 439
+++ C L
Sbjct: 577 VVTFCVL 583
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 43/373 (11%)
Query: 36 SRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGLVVVDGLESDVYVGNSL 95
+++ Y +M G + +TY ++ A + R+ ++ G+E +V +L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 96 ISMYLKFGDMGTARLVFDKMP----VRDLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGL 151
I M A +F KM + +L S+N ++ G+VK A + + ++ G+
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 152 VGD----GTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR---LSNNEFVTNSMIDMYCN 204
D GT + L S L K VV N + + N + +++D Y
Sbjct: 504 KPDLLLYGTFIWGLCS---------LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY-- 552
Query: 205 CDFISGARKLFEGLAVKD----------TVSWNSLISGYEKCGGAFQVLELFGQMFIGGA 254
F SG EGL + D V++ LI G K + ++ F ++
Sbjct: 553 --FKSGNPT--EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 255 VPDEVTVISVL--GACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
+ + + + G C + + + +++ +V+KG + TSL+ G+ L A
Sbjct: 609 LQANAAIFTAMIDGLC-KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 313 ---HRAFNEIPDK-SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
EI K L ++T +V G + ++A S EM+G+ I PDE + +VL
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 369 CSHSGLVDEGKEI 381
G +DE E+
Sbjct: 728 HYELGCIDEAVEL 740
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 173/390 (44%), Gaps = 28/390 (7%)
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGEAG 137
G+ D+Y + I+ + + + A V KM P D+ + +++++GY +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRIS 170
Query: 138 DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT-N 196
DA + D M G D T L+ G + K +AV V + R + VT
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIH--GLFLHNKASEAV-ALVDQMVQRGCQPDLVTYG 227
Query: 197 SMIDMYC---NCDF-ISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
++++ C + D +S +K+ +G D V +N++I G K L LF +M
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
G PD T S++ S + S ++++ N ++LI + G + A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 313 HRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
+ ++E+ +S+ +++ ++ GF +H + EA +F M+ K+ P+ ++ ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM---KLKP 425
+ V+EG E+F +M++ V T T Y+ L+ +A D A M + P
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFE 455
N + LL L +N KLA+ A +FE
Sbjct: 467 NILTYNILLDG--LCKNGKLAK--AMVVFE 492
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 192/455 (42%), Gaps = 30/455 (6%)
Query: 20 NSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGL 79
+S++ GY S S ++ L +M+ G K D FT+ ++ L L L
Sbjct: 157 SSLLNGYCHS---KRISDAVALVDQMVEMGYKPDTFTFTTLIHG---LFLHNKASEAVAL 210
Query: 80 V---VVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV----RDLTSWNTMMSGYVK 132
V V G + D+ ++++ K GD+ A + KM D+ +NT++ G K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
DA +F M G+ D T +L+S + + ++ +++ N
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER--KINPNV 328
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQ 248
+++ID + + A KL++ + + D +++SLI+G+ + +F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 249 MFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGS 308
M P+ VT +++ + + G + + ++G NT T+LI +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 309 FLCAHRAFNEIPD----KSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTA 364
A F ++ ++ ++ +++ G +GK +A+ +F + + PD +
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 365 VLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK 424
++ +G V++G E+F ++ V P Y+ ++ R G +EA + + MK
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 425 ---PNEDVWTALLSACRLHRNVKLAEISAQKLFEM 456
PN + L+ A RL + E SA+ + EM
Sbjct: 568 GPLPNSGTYNTLIRA-RLRDGDR--EASAELIKEM 599
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 180/424 (42%), Gaps = 63/424 (14%)
Query: 33 NSSSRSLVLYREMLSFGQKADNFTYPFVLKAC---GDLLLREMGIRVHGLVVVDGLESDV 89
N +S ++ L M+ G + + TY V+ GD+ ++ + + +E+DV
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI---DLAFNLLNKMEAAKIEADV 185
Query: 90 YVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDH 145
+ N++I K+ + A +F +M + ++ ++++++S G DA +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 146 MRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNC 205
M + + T AL+ A + +H +++ S + + F NS+I+ +C
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS--IDPDIFTYNSLINGFCMH 303
Query: 206 DFISGARKLFEGLAVKDTV----SWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTV 261
D + A+++FE + KD ++N+LI G+ K ELF +M G V D VT
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 262 ISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEI-- 319
T+LI + G A + F ++
Sbjct: 364 -----------------------------------TTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 320 ----PDKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLV 375
PD + ++++++ G +GK +A+ +F+ M I D ++T ++ +G V
Sbjct: 389 DGVPPD--IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 376 DEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKLK---PNEDVWTA 432
D+G ++F ++ V+P Y+ ++ L L EAYA + MK P+ +
Sbjct: 447 DDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 433 LLSA 436
L+ A
Sbjct: 506 LIRA 509
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 144/353 (40%), Gaps = 21/353 (5%)
Query: 84 GLESDVYVGNSLISMYLKFGDMGTARLVFDKM------PVRDLTSWNTMMSGYVKNGEAG 137
G+ ++Y N LI+ + + + A + KM P + + +++++GY
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRIS 97
Query: 138 DAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVT-N 196
DA + D M G D T L+ G + K +AV V R R VT
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIH--GLFLHNKASEAV-ALVDRMVQRGCQPNLVTYG 154
Query: 197 SMIDMYCNCDFISGARKLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+++ C I A L + D V +N++I K L LF +M
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
G P+ VT S++ S + S +++K N +LI + G F+ A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 313 HRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
+ +++ +S+ ++ ++ GF +H + +A +F M+ K+ PD + ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
S V++G E+F +M+ V T T Y+ L+ L G D A M
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQM 386
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/458 (19%), Positives = 180/458 (39%), Gaps = 54/458 (11%)
Query: 20 NSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKACGDLLLREMGIRVHGL 79
+S++ GY G S ++ L +M+ G + D T+ ++ L L L
Sbjct: 84 SSLLNGYC---HGKRISDAVALVDQMVEMGYRPDTITFTTLIHG---LFLHNKASEAVAL 137
Query: 80 V---VVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVK 132
V V G + ++ +++ K GD+ A + +KM D+ +NT++ K
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 133 NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNE 192
DA +F M G+ + T +L+S + + GR S+
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISC-----------------LCSYGRWSDAS 240
Query: 193 FVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFGQMFIG 252
+ + MI+ N + V++N+LI + K G + +L M
Sbjct: 241 QLLSDMIEKKIN----------------PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 253 GAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCA 312
PD T S++ L + ++V K + +LI +
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 313 HRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSA 368
F E+ + L ++T ++ G G A +F +M+ + PD ++ +L
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 369 CSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL---KP 425
++G +++ E+F M + ++ Y+ +++ + +AGK+D+ + ++ L KP
Sbjct: 405 LCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 426 NEDVWTALLSACRLHRNVKLAEISAQKLFEMDPNKVSG 463
N + ++S R ++ A +K+ E P SG
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 158/360 (43%), Gaps = 16/360 (4%)
Query: 76 VHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPV----RDLTSWNTMMSGYV 131
V+ ++ ++ +V+ N +I+ K G M AR V + M V ++ S+NT++ GY
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 132 K---NGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRL 188
K NG+ A V M + + + TT L+ G D L ++ + +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID--GFWKDDNLPGSMKVFKEMLDQDV 327
Query: 189 SNNEFVTNSMIDMYCNCDFISGA----RKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLE 244
N NS+I+ CN IS A K+ + +++N+LI+G+ K + L+
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 245 LFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYA 304
+FG + GAVP ++ A ++ + G ++ + ++G + LI+
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 305 NCGSFLCAHRAFNEIPDK---SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGV 361
G+ A + F+++ K L ++ +++ G+ G+ R+A + EM + P
Sbjct: 448 RNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 362 FTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
+ V+ G + + +M ++ + Y+ L+ + GKL++A ++ M
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 146/331 (44%), Gaps = 61/331 (18%)
Query: 143 FDHMRRSGLVGDGTTMLALLSACGDLMD--LKLGKA-----VHGYVVRNSGRLSNNEFVT 195
F+ +RSG G + L+ C LM LK ++ V+ ++R ++ N F
Sbjct: 173 FEAFKRSGYYGYKLSALS----CKPLMIALLKENRSADVEYVYKEMIRR--KIQPNVFTF 226
Query: 196 NSMIDMYCNCDFISGARKLFEGLAV----KDTVSWNSLISGYEKCGGAFQVLELFGQMFI 251
N +I+ C ++ AR + E + V + VS+N+LI GY K GG G+M+
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN-------GKMYK 279
Query: 252 GGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLC 311
AV E +V+ N LI + +
Sbjct: 280 ADAVLKE-------------------------MVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 312 AHRAFNEIPDK----SLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLS 367
+ + F E+ D+ ++ S+ ++ G GK EAIS+ ++M+ + P+ + A+++
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 368 ACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMK---LK 424
+ ++ E ++F + + PTT Y+ L+D + GK+D+ +A + M+ +
Sbjct: 375 GFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 425 PNEDVWTALLSACRLHRNVKLAEISAQKLFE 455
P+ + L++ + N++ +A+KLF+
Sbjct: 434 PDVGTYNCLIAGLCRNGNIE----AAKKLFD 460
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 37/274 (13%)
Query: 7 IFDQIVFKNSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKA-CG 65
+ DQ V N +NS+I G C+ G S ++ + +M+S G + + TY ++ C
Sbjct: 322 MLDQDVKPNVISYNSLINGL-CNGG--KISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 66 DLLLREMGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMP----VRDLT 121
+ +L+E + + G V G + N LI Y K G + + ++M V D+
Sbjct: 379 NDMLKE-ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 122 SWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV---------------GDGTTMLALLSACG 166
++N +++G +NG A +FD + GL G+ LL
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 167 DLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSW 226
M LK + V++ + N + TN M R+L +A S+
Sbjct: 498 K-MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM-------EKERRLRMNVA-----SY 544
Query: 227 NSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVT 260
N L+ GY + G L +M G VP+ +T
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 184/423 (43%), Gaps = 24/423 (5%)
Query: 15 NSFLWNSMIRGYACSAGGNSSSRSLVLYREMLSFGQKADNFTYPFVLKAC---GDLLLRE 71
N+ +N++I G N +S ++ L M++ G + D FTY V+ GD+ +
Sbjct: 184 NTVTFNTLIHGLFLH---NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI---D 237
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVR----DLTSWNTMM 127
+ + + + +E+DV + ++I + ++ A +F +M + ++ ++N+++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
G DA + M + + T AL+ A L + ++ +++ S
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-- 355
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKD----TVSWNSLISGYEKCGGAFQVL 243
+ + F +S+I+ +C D + A+ +FE + KD V++N+LI G+ K + +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 244 ELFGQMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMY 303
ELF +M G V + VT +++ + + + +V G + + L+
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 304 ANCGSFLCAHRAFNEIP----DKSLASWTVMVTGFGIHGKGREAISIFNEMLGKNITPDE 359
G A F + + + ++ +M+ G GK + +F + K + P+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 360 GVFTAVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATID 419
++T ++S GL +E +F +M D + P + Y+ L+ R G + I
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 420 NMK 422
M+
Sbjct: 595 EMR 597
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 172/418 (41%), Gaps = 21/418 (5%)
Query: 38 SLVLYREMLSFGQKADNFTYPFVLKA-CGDLLLREMGIRVHGLVVVDGLESDVYVGNSLI 96
+L + +M+ G + D T +L C + E V + V++ + + N+LI
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME-YQPNTVTFNTLI 192
Query: 97 SMYLKFGDMGTARLVFDKMPVR----DLTSWNTMMSGYVKNGEAGDAFVVFDHMRRSGLV 152
A + D+M R DL ++ T+++G K G+ A + M + +
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 153 GDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGRLSNNEFVTNSMIDMYCNCDFISGAR 212
D ++ A + ++ A++ + ++ + N NS+I CN S A
Sbjct: 253 ADVVIYTTIIDALCNYKNV--NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 213 KLFEGLAVK----DTVSWNSLISGYEKCGGAFQVLELFGQMFIGGAVPDEVTVISVLGAC 268
+L + + + V++++LI + K G + +L+ +M PD T S++
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 269 SRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCGSFLCAHRAFNEIPDKSLASWT 328
L + ++ K N +LI + F E+ + L T
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 329 V----MVTGFGIHGKGREAISIFNEMLGKNITPDEGVFTAVLSACSHSGLVDEGKEIFYK 384
V ++ G G A IF +M+ + PD ++ +L G +++ +F
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 385 MTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNMKL---KPNEDVWTALLSA-CR 438
+ + +EP Y+ +++ + +AGK+++ + ++ L KPN ++T ++S CR
Sbjct: 491 LQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 148/358 (41%), Gaps = 42/358 (11%)
Query: 72 MGIRVHGLVVVDGLESDVYVGNSLISMYLKFGDMGTARLVFDKMPVRD----LTSWNTMM 127
+ + V G ++ G E D+ +SL++ Y + A + D+M V + ++NT++
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 128 SGYVKNGEAGDAFVVFDHMRRSGLVGDGTTMLALLSACGDLMDLKLGKAVHGYVVRNSGR 187
G + +A +A + D M G D T G V+G R
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFT---------------YGTVVNGLCKRGDID 237
Query: 188 LSNNEFVTNSMIDMYCNCDFISGARKLFEGLAVKDTVSWNSLISGYEKCGGAFQVLELFG 247
L+ +S +K+ +G D V + ++I L LF
Sbjct: 238 LA------------------LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279
Query: 248 QMFIGGAVPDEVTVISVLGACSRISALLLGSSVHSYLVKKGYGMNTAVGTSLISMYANCG 307
+M G P+ VT S++ S + S ++++ N ++LI + G
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 308 SFLCAHRAFNEIPDKSLA----SWTVMVTGFGIHGKGREAISIFNEMLGKNITPDEGVFT 363
+ A + ++E+ +S+ +++ ++ GF +H + EA +F M+ K+ P+ +
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 364 AVLSACSHSGLVDEGKEIFYKMTRDYNVEPTTTHYSCLVDLLGRAGKLDEAYATIDNM 421
++ + V+EG E+F +M++ V T T Y+ L+ L +AG D A M
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKM 456