Miyakogusa Predicted Gene

Lj3g3v2888220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888220.1 Non Chatacterized Hit- tr|I1KF88|I1KF88_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28074
PE,71.28,0,seg,NULL; L domain-like,NULL; LRR,Leucine-rich repeat; no
description,NULL; LRR_8,NULL; LRR_6,NULL; ,CUFF.44904.1
         (677 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G03260.2 | Symbols:  | Outer arm dynein light chain 1 protein...   483   e-136
AT4G03260.1 | Symbols:  | Outer arm dynein light chain 1 protein...   483   e-136
AT1G78230.1 | Symbols:  | Outer arm dynein light chain 1 protein...   228   8e-60
AT5G22320.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    62   2e-09
AT5G22320.2 | Symbols:  | Leucine-rich repeat (LRR) family prote...    52   2e-06
AT2G34680.1 | Symbols: AIR9 | Outer arm dynein light chain 1 pro...    51   3e-06

>AT4G03260.2 | Symbols:  | Outer arm dynein light chain 1 protein |
           chr4:1429092-1431431 FORWARD LENGTH=677
          Length = 677

 Score =  483 bits (1243), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 324/712 (45%), Positives = 451/712 (63%), Gaps = 70/712 (9%)

Query: 1   MFRFSCFHANVQGHKTKKTVLP-TEAMVKASQDGSKSQVYKDXXXXXXXXXXXXXEQVHK 59
           M RFSCF+A++  H+ KK+V   +E ++K  +DGSKS+                   +  
Sbjct: 1   MVRFSCFNAHIHRHRPKKSVEGFSERVIK--EDGSKSKGLSSI--------------IFG 44

Query: 60  KMNVIESQISSSDSVERIDRSEDLNSKFSIELEREAHQTGCLKKSQSLGG-LY---RGTT 115
           +     S+ S   +VER+ +SE++     +E     HQ   LKKSQS G  LY   R  T
Sbjct: 45  RNIASVSENSKPAAVERVWKSEEIKPSGILEHGIGTHQVLHLKKSQSHGNELYLDGRDAT 104

Query: 116 E-GDEDLG--FSGNNS----QGCYDSPGVNSIDQSEKNPDFEFQ-----VNLDLANND-- 161
           E G +D     +  NS     G +++     +D+S   P+   Q     V+    +N   
Sbjct: 105 ENGTDDASDRITSPNSLEQQSGIHEAGSSKRVDES---PNLYQQGPRASVSAYQGSNQAL 161

Query: 162 --SLFSIGDPSPSDKG--EISETPLSGELAGDSADQNSGPGTPSLMKSRSLPNIKASTLS 217
             S+FS+GD   +DK   ++ +T L GE   D+++  +   +P +++S SLPNI A + S
Sbjct: 162 CGSIFSVGDLHHTDKDSRQLDDTSLYGEQM-DNSNSQTPHDSPLMVRSNSLPNI-ADSSS 219

Query: 218 PENHAFKHPSSKSRSSDDLHALGMRKKEGFINESEDQIR--EGQEREDNIGKTEDNHMGE 275
            ++  FK+ S  SRSSDDLHAL  R+ +  ++E++++++  E Q+R+ ++  + DN+   
Sbjct: 220 EKSSPFKYSSHHSRSSDDLHALDTRQTDKSVHETDEEVKQEEDQDRDYDMHNSGDNNKEN 279

Query: 276 YFDDGFD-SYLLSDLEKDWVMPTTDDISEVKTLQGDNSVDCFGEFPNKDFKVKRIEDWVV 334
             +DG+D SY  S L KDW++P TD++   K L+G+ + +   EF  KD K KRIEDWV 
Sbjct: 280 LVEDGYDDSYDYSSLAKDWIVPPTDELKLSKFLEGE-TTNQQAEFSGKDSKFKRIEDWVN 338

Query: 335 DLQHC--GPPVEEI----NELPESVDPVVDINTINGVTAAGVNHKITPGMEAAKRYISSL 388
           DLQH       +EI    +ELP   +PVV +N     +A     K+TPGMEAAK+YISSL
Sbjct: 339 DLQHVNLSEEADEITGYDDELPR--EPVV-LNEQATSSAKVDAIKLTPGMEAAKKYISSL 395

Query: 389 TANASAAQLANHGLVVVPFLSAFVSLKVLNLAGNSIVRITAGALPRGLHXXXXXXXXXXX 448
           +A+A+ AQL +HGLVV+PFLSAFV L+VLNL+GN+IVRITAGALPRGLH           
Sbjct: 396 SASATTAQLVSHGLVVIPFLSAFVGLRVLNLSGNAIVRITAGALPRGLHALNLSKNSISV 455

Query: 449 XEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGEVEGLHRLLKLSILDL 508
            EGLRELTRLRVLDLSYNRILR+GHGLASCSSLKELYLAGNKI E+EGLHRLLKL++LDL
Sbjct: 456 IEGLRELTRLRVLDLSYNRILRLGHGLASCSSLKELYLAGNKISEIEGLHRLLKLTVLDL 515

Query: 509 RFNKISTAKCLGQLAANYNSLQAINLDGNPCQKNVGDEQLKKYLQGLLPHLVYYNRQAMK 568
           RFNK ST KCLGQLAANY+SLQAI+L+GNP QKNVGDEQL+KYL GLLP+LVYYNRQ  K
Sbjct: 516 RFNKFSTTKCLGQLAANYSSLQAISLEGNPAQKNVGDEQLRKYLLGLLPNLVYYNRQGTK 575

Query: 569 VSTLKDGADRLVRLGTNDRSLRVDRK-TTRKGSHGVAAARRPPSTSTHSHRSQTVESPKL 627
            + L     +L      DR LR + K ++RK SHG +++ +P S++  + ++  ++  K 
Sbjct: 576 DARLGTSTHQL------DRGLRSELKNSSRKSSHGASSSHKPGSST--ARKAPALQ--KR 625

Query: 628 SKGKQSHLPPIRTKVSTQS--RHYLDAQSKVLNLTSGHSMRKSRSEGTLGAL 677
           SK ++S LPP+  K+S  +   +++    ++ +L +  SMR+SRSEGTLG +
Sbjct: 626 SKERRSRLPPVGHKLSPAAYENYHVATGDRLSSLRTELSMRRSRSEGTLGPI 677


>AT4G03260.1 | Symbols:  | Outer arm dynein light chain 1 protein |
           chr4:1429092-1431431 FORWARD LENGTH=677
          Length = 677

 Score =  483 bits (1243), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 324/712 (45%), Positives = 451/712 (63%), Gaps = 70/712 (9%)

Query: 1   MFRFSCFHANVQGHKTKKTVLP-TEAMVKASQDGSKSQVYKDXXXXXXXXXXXXXEQVHK 59
           M RFSCF+A++  H+ KK+V   +E ++K  +DGSKS+                   +  
Sbjct: 1   MVRFSCFNAHIHRHRPKKSVEGFSERVIK--EDGSKSKGLSSI--------------IFG 44

Query: 60  KMNVIESQISSSDSVERIDRSEDLNSKFSIELEREAHQTGCLKKSQSLGG-LY---RGTT 115
           +     S+ S   +VER+ +SE++     +E     HQ   LKKSQS G  LY   R  T
Sbjct: 45  RNIASVSENSKPAAVERVWKSEEIKPSGILEHGIGTHQVLHLKKSQSHGNELYLDGRDAT 104

Query: 116 E-GDEDLG--FSGNNS----QGCYDSPGVNSIDQSEKNPDFEFQ-----VNLDLANND-- 161
           E G +D     +  NS     G +++     +D+S   P+   Q     V+    +N   
Sbjct: 105 ENGTDDASDRITSPNSLEQQSGIHEAGSSKRVDES---PNLYQQGPRASVSAYQGSNQAL 161

Query: 162 --SLFSIGDPSPSDKG--EISETPLSGELAGDSADQNSGPGTPSLMKSRSLPNIKASTLS 217
             S+FS+GD   +DK   ++ +T L GE   D+++  +   +P +++S SLPNI A + S
Sbjct: 162 CGSIFSVGDLHHTDKDSRQLDDTSLYGEQM-DNSNSQTPHDSPLMVRSNSLPNI-ADSSS 219

Query: 218 PENHAFKHPSSKSRSSDDLHALGMRKKEGFINESEDQIR--EGQEREDNIGKTEDNHMGE 275
            ++  FK+ S  SRSSDDLHAL  R+ +  ++E++++++  E Q+R+ ++  + DN+   
Sbjct: 220 EKSSPFKYSSHHSRSSDDLHALDTRQTDKSVHETDEEVKQEEDQDRDYDMHNSGDNNKEN 279

Query: 276 YFDDGFD-SYLLSDLEKDWVMPTTDDISEVKTLQGDNSVDCFGEFPNKDFKVKRIEDWVV 334
             +DG+D SY  S L KDW++P TD++   K L+G+ + +   EF  KD K KRIEDWV 
Sbjct: 280 LVEDGYDDSYDYSSLAKDWIVPPTDELKLSKFLEGE-TTNQQAEFSGKDSKFKRIEDWVN 338

Query: 335 DLQHC--GPPVEEI----NELPESVDPVVDINTINGVTAAGVNHKITPGMEAAKRYISSL 388
           DLQH       +EI    +ELP   +PVV +N     +A     K+TPGMEAAK+YISSL
Sbjct: 339 DLQHVNLSEEADEITGYDDELPR--EPVV-LNEQATSSAKVDAIKLTPGMEAAKKYISSL 395

Query: 389 TANASAAQLANHGLVVVPFLSAFVSLKVLNLAGNSIVRITAGALPRGLHXXXXXXXXXXX 448
           +A+A+ AQL +HGLVV+PFLSAFV L+VLNL+GN+IVRITAGALPRGLH           
Sbjct: 396 SASATTAQLVSHGLVVIPFLSAFVGLRVLNLSGNAIVRITAGALPRGLHALNLSKNSISV 455

Query: 449 XEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGEVEGLHRLLKLSILDL 508
            EGLRELTRLRVLDLSYNRILR+GHGLASCSSLKELYLAGNKI E+EGLHRLLKL++LDL
Sbjct: 456 IEGLRELTRLRVLDLSYNRILRLGHGLASCSSLKELYLAGNKISEIEGLHRLLKLTVLDL 515

Query: 509 RFNKISTAKCLGQLAANYNSLQAINLDGNPCQKNVGDEQLKKYLQGLLPHLVYYNRQAMK 568
           RFNK ST KCLGQLAANY+SLQAI+L+GNP QKNVGDEQL+KYL GLLP+LVYYNRQ  K
Sbjct: 516 RFNKFSTTKCLGQLAANYSSLQAISLEGNPAQKNVGDEQLRKYLLGLLPNLVYYNRQGTK 575

Query: 569 VSTLKDGADRLVRLGTNDRSLRVDRK-TTRKGSHGVAAARRPPSTSTHSHRSQTVESPKL 627
            + L     +L      DR LR + K ++RK SHG +++ +P S++  + ++  ++  K 
Sbjct: 576 DARLGTSTHQL------DRGLRSELKNSSRKSSHGASSSHKPGSST--ARKAPALQ--KR 625

Query: 628 SKGKQSHLPPIRTKVSTQS--RHYLDAQSKVLNLTSGHSMRKSRSEGTLGAL 677
           SK ++S LPP+  K+S  +   +++    ++ +L +  SMR+SRSEGTLG +
Sbjct: 626 SKERRSRLPPVGHKLSPAAYENYHVATGDRLSSLRTELSMRRSRSEGTLGPI 677


>AT1G78230.1 | Symbols:  | Outer arm dynein light chain 1 protein |
           chr1:29430226-29432516 FORWARD LENGTH=681
          Length = 681

 Score =  228 bits (582), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 181/288 (62%), Gaps = 14/288 (4%)

Query: 319 FPNKDFKVKRIEDWV--VDLQHCGPPVEEINEL---PESVDPVVDINTINGVTAAGVNHK 373
           F  +   +KR+++WV  +D++   P  E+ + L   P S  P  + + +  V  +G    
Sbjct: 358 FSAESSSMKRVDEWVRGLDVETVVPVNEDKDVLAIFPTS--PNTERSPLGNVVQSG---N 412

Query: 374 ITPGMEAAKRYISSLTANASAAQLANHGLVVVPFLSAFVSLKVLNLAGNSIVRITAGALP 433
           ++  +  A   I SL+ ++S A +++ GL  +P +S F SLK ++L+ N IV+IT  +LP
Sbjct: 413 VSEAIVHANSLIQSLSKSSSVAHISSIGLKAIPSISHFTSLKSIDLSNNFIVQITPASLP 472

Query: 434 RGLHXXXXXXXXXXXXEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGE 493
           +GLH            EGLR+LTRLRVLDLSYNRI RIG GL++C+ +KELYLAGNKI  
Sbjct: 473 KGLHALNLSKNKISVIEGLRDLTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISN 532

Query: 494 VEGLHRLLKLSILDLRFNKISTAKCLGQLAANYNSLQAINLDGNPCQKNVGDEQLKKYLQ 553
           VEGLHRLLKL +LDL FNKI+T K +GQL ANYNSL A+N+ GNP Q NVG++QL+K + 
Sbjct: 533 VEGLHRLLKLIVLDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQNNVGEDQLRKTVS 592

Query: 554 GLLPHLVYYNRQAMKVS----TLKDGADRLVRLGTNDRSLRVDRKTTR 597
            LLP LVY+N+Q +K       LKD   R    G +    R  R +T+
Sbjct: 593 SLLPKLVYHNKQLIKPQRAREVLKDSVARAAFGGGDSLHHRRKRTSTK 640


>AT5G22320.1 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr5:7388175-7390426 REVERSE LENGTH=452
          Length = 452

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 14/187 (7%)

Query: 408 LSAFVSLKVLNLAGNSIVRITAGALPRGLHXXXXXXX-XXXXXEGLRELTRLRVLDLSYN 466
           +S+ V+L+ L L  N I  I    L + L+             + L +L  L  + LS  
Sbjct: 103 ISSLVNLRALILNDNEISSICKLDLLKDLNSLVLSRNPISEIGDSLSKLKNLSKISLSDC 162

Query: 467 RILRIGHGLASCSSLKELYLAGNKI----GEVEGLHRLLKLSILDLRFNKISTAKCLGQL 522
           RI  IG  L SCS LKEL LA N+I     E+    RLL L + +    ++S  + LG L
Sbjct: 163 RIKAIGSSLKSCSDLKELRLANNEIKALPAELAVNKRLLNLDVGNNVITQLSGLEVLGTL 222

Query: 523 AANYNSLQAINLDGNPCQKNVGDEQLKKYLQGLLPHLVYYNRQAMKVSTLKDGADRLVRL 582
           +     L+ +N+ GNP   N  D+  KK    LLP +  +N Q ++ S+      + +RL
Sbjct: 223 SC----LRNLNIRGNPISDN--DKSAKKVRTLLLPSVNVFNAQPLEKSS---RNAKHIRL 273

Query: 583 GTNDRSL 589
            T+D + 
Sbjct: 274 DTDDETF 280


>AT5G22320.2 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr5:7388175-7390426 REVERSE LENGTH=436
          Length = 436

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 26/196 (13%)

Query: 408 LSAFVSLKVLNLAGN---SIVRITAGALPRGLHXXXXXXXXXXXXEGLRELTRLRVLDLS 464
           + A   L VLN   N   S+  I++    R L             + L++L  L    LS
Sbjct: 81  IEALTKLTVLNAGKNKLKSMNEISSLVNLRALILNDNEISSICKLDLLKDLNSLV---LS 137

Query: 465 YNRILRIGHGLA-------SCSSLKELYLAGNKI----GEVEGLHRLLKLSILDLRFNKI 513
            N I  IG  L+       SCS LKEL LA N+I     E+    RLL L + +    ++
Sbjct: 138 RNPISEIGDSLSKLKNLSKSCSDLKELRLANNEIKALPAELAVNKRLLNLDVGNNVITQL 197

Query: 514 STAKCLGQLAANYNSLQAINLDGNPCQKNVGDEQLKKYLQGLLPHLVYYNRQAMKVSTLK 573
           S  + LG L+     L+ +N+ GNP   N  D+  KK    LLP +  +N Q ++ S+  
Sbjct: 198 SGLEVLGTLSC----LRNLNIRGNPISDN--DKSAKKVRTLLLPSVNVFNAQPLEKSS-- 249

Query: 574 DGADRLVRLGTNDRSL 589
               + +RL T+D + 
Sbjct: 250 -RNAKHIRLDTDDETF 264


>AT2G34680.1 | Symbols: AIR9 | Outer arm dynein light chain 1
           protein | chr2:14616947-14628300 REVERSE LENGTH=1708
          Length = 1708

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 30/206 (14%)

Query: 417 LNLAGNSIVRITAGAL--PRGLHXXXXXXXXXXXXEGLRELTRLRVLDLSYNRILRIG-H 473
           L+L G+ I  +T+G L     L             EG+  L R++VLDLS+N     G  
Sbjct: 273 LDLRGHRIRSLTSGGLHLSPNLEFVYLRDNLLSTLEGIEILNRVKVLDLSFNDFKGPGFE 332

Query: 474 GLASCSSLKELYLAGNKIGEVEGLHRLLKLSILDLRFNKISTAKCLGQ-----LAANYNS 528
            L +C  L++LYLAGN+I  +  L +L  L  L +  NK+ +     Q     LAA+ N 
Sbjct: 333 PLENCKMLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLAMASQPRLQVLAASKNK 392

Query: 529 LQAINLDGNPCQKNVGDEQLKKYLQGLLPHLVYYNRQAMKVSTLKDGADRLVRLGTNDRS 588
           +    L   P            YL  +L HL       +K+S L+  A  ++ +G   + 
Sbjct: 393 IT--TLKDFP------------YLP-VLEHLRVEENPLLKISHLE--AASILLVGPTLKK 435

Query: 589 LRVDRKTTRKGSHGVAAARR-PPSTS 613
              DR  +R+    VA A+R PP T+
Sbjct: 436 FN-DRDLSRE---EVAIAKRYPPQTA 457