Miyakogusa Predicted Gene

Lj3g3v2873690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2873690.1 CUFF.44839.1
         (90 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10265.1 | Symbols:  | Wound-responsive family protein | chr4...   103   2e-23
AT4G10270.1 | Symbols:  | Wound-responsive family protein | chr4...   103   3e-23

>AT4G10265.1 | Symbols:  | Wound-responsive family protein |
          chr4:6373226-6373477 REVERSE LENGTH=83
          Length = 83

 Score =  103 bits (258), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/86 (58%), Positives = 60/86 (69%), Gaps = 6/86 (6%)

Query: 3  SSGMRAWSVAASVGVVEALKDQLGICRWNYAIKSAQQHLKNHVRSFPQTKKLXXXXXXMI 62
          SS  + W VAAS+G VEALKDQLG+CRWNY I+SA Q+L+N++RS  Q KKL        
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDYT 61

Query: 63 SRKLKDEEAKQPEESLRTVMYLSCWG 88
          ++       KQ EESLRTVMYLSCWG
Sbjct: 62 NK------TKQAEESLRTVMYLSCWG 81


>AT4G10270.1 | Symbols:  | Wound-responsive family protein |
          chr4:6374805-6375077 FORWARD LENGTH=90
          Length = 90

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 1/89 (1%)

Query: 3  SSGMRAWSVAASVGVVEALKDQLGICRWNYAIKSAQQHLKNHVRSFPQTKKLXXXXXXMI 62
          SS  +AW+VA S+G VEALKDQLG+CRWNY ++S  QHL+N+VRS  Q K+         
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 63 SRKLKD-EEAKQPEESLRTVMYLSCWGNN 90
               + E+AK+ EESLRTVMYLSCWG N
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90