Miyakogusa Predicted Gene

Lj3g3v2873680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2873680.1 Non Chatacterized Hit- tr|I1KF74|I1KF74_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,74.65,2e-19,DUF3774,Protein of unknown function wound-induced;
seg,NULL,CUFF.44840.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10265.1 | Symbols:  | Wound-responsive family protein | chr4...    79   5e-16
AT4G10270.1 | Symbols:  | Wound-responsive family protein | chr4...    75   8e-15

>AT4G10265.1 | Symbols:  | Wound-responsive family protein |
          chr4:6373226-6373477 REVERSE LENGTH=83
          Length = 83

 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 48/69 (69%)

Query: 3  SSGMRAWSVAASVGVVEALKDQLGICRWNYAIKSAQQHLKNHVRSFPQTKKLXXXXXXMI 62
          SS  + W VAAS+G VEALKDQLG+CRWNY I+SA Q+L+N++RS  Q KKL        
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDYT 61

Query: 63 SRKLKDEEA 71
          ++  + EE+
Sbjct: 62 NKTKQAEES 70


>AT4G10270.1 | Symbols:  | Wound-responsive family protein |
          chr4:6374805-6375077 FORWARD LENGTH=90
          Length = 90

 Score = 75.1 bits (183), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 41/52 (78%)

Query: 3  SSGMRAWSVAASVGVVEALKDQLGICRWNYAIKSAQQHLKNHVRSFPQTKKL 54
          SS  +AW+VA S+G VEALKDQLG+CRWNY ++S  QHL+N+VRS  Q K+ 
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRF 53