Miyakogusa Predicted Gene

Lj3g3v2873670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2873670.1 Non Chatacterized Hit- tr|I3SKC5|I3SKC5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,69.89,2e-19,DUF3774,Protein of unknown function wound-induced;
seg,NULL,CUFF.44838.1
         (90 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10270.1 | Symbols:  | Wound-responsive family protein | chr4...   102   8e-23
AT4G10265.1 | Symbols:  | Wound-responsive family protein | chr4...   100   1e-22

>AT4G10270.1 | Symbols:  | Wound-responsive family protein |
          chr4:6374805-6375077 FORWARD LENGTH=90
          Length = 90

 Score =  102 bits (253), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 1/89 (1%)

Query: 3  SSGMRAWSIAASVGVVEALKDQLGICRWNYAIKSAQQHLKNHVRSFPQTMQLXXXXXXMI 62
          SS  +AW++A S+G VEALKDQLG+CRWNY ++S  QHL+N+VRS  Q  +         
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 63 SRRLKD-EEAKQPEESLKTVMYLNCWGPN 90
               + E+AK+ EESL+TVMYL+CWGPN
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90


>AT4G10265.1 | Symbols:  | Wound-responsive family protein |
          chr4:6373226-6373477 REVERSE LENGTH=83
          Length = 83

 Score =  100 bits (250), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 6/88 (6%)

Query: 3  SSGMRAWSIAASVGVVEALKDQLGICRWNYAIKSAQQHLKNHVRSFPQTMQLXXXXXXMI 62
          SS  + W +AAS+G VEALKDQLG+CRWNY I+SA Q+L+N++RS  Q  +L        
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDYT 61

Query: 63 SRRLKDEEAKQPEESLKTVMYLNCWGPN 90
          ++       KQ EESL+TVMYL+CWGP+
Sbjct: 62 NK------TKQAEESLRTVMYLSCWGPS 83