Miyakogusa Predicted Gene

Lj3g3v2873590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2873590.1 Non Chatacterized Hit- tr|I1KF65|I1KF65_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.89,0,NADH
DEHYDROGENASE-RELATED,NULL; FAD/NAD(P)-binding domain,NULL;
Pyr_redox_2,Pyridine nucleotide-dis,CUFF.44829.1
         (142 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21490.1 | Symbols: NDB3 | NAD(P)H dehydrogenase B3 | chr4:11...   215   1e-56
AT4G05020.2 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:25...   212   6e-56
AT4G05020.1 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:25...   212   6e-56
AT2G20800.1 | Symbols: NDB4 | NAD(P)H dehydrogenase B4 | chr2:89...   191   1e-49
AT4G28220.1 | Symbols: NDB1 | NAD(P)H dehydrogenase B1 | chr4:13...   187   3e-48
AT1G07180.1 | Symbols: ATNDI1, NDA1 | alternative  NAD(P)H dehyd...   102   1e-22
AT2G29990.1 | Symbols: NDA2 | alternative NAD(P)H dehydrogenase ...   100   3e-22

>AT4G21490.1 | Symbols: NDB3 | NAD(P)H dehydrogenase B3 |
           chr4:11436495-11439326 REVERSE LENGTH=580
          Length = 580

 Score =  215 bits (547), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 120/142 (84%)

Query: 1   MKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSISRKSGLDIQFSEAECYK 60
           + +SSY++ V+SPRNYFAFTPLLPSVTCGTVEARSVVEPIR+I+RK  +++ F EAEC+K
Sbjct: 74  LNNSSYEVQVISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFK 133

Query: 61  IDPKNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDA 120
           IDP + KVYCRS Q     G +EF +DYDYLVIA GA+SNTFN PGV+E+ HFLKEVEDA
Sbjct: 134 IDPGSKKVYCRSKQGVNSKGKKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDA 193

Query: 121 QRIRQTVINLFERASLPSLSEE 142
           QRIR TVI+ FE+ASLP L+E+
Sbjct: 194 QRIRSTVIDSFEKASLPGLNEQ 215


>AT4G05020.2 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 |
           chr4:2572752-2576222 FORWARD LENGTH=619
          Length = 619

 Score =  212 bits (540), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 1/142 (0%)

Query: 1   MKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSISRKSGLDIQFSEAECYK 60
           + +S Y++ ++SPRNYFAFTPLLPSVTCGTVEARSVVEPIR+I RK+ +D  + EAEC+K
Sbjct: 77  LNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIGRKN-VDTSYLEAECFK 135

Query: 61  IDPKNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDA 120
           IDP + KVYCRS Q     G +EFS+DYDYLVIA GA+SNTFN PGV+E+ HFLKEVEDA
Sbjct: 136 IDPASKKVYCRSKQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDA 195

Query: 121 QRIRQTVINLFERASLPSLSEE 142
           QRIR+TVI+ FE+ASLP LS+E
Sbjct: 196 QRIRKTVIDSFEKASLPELSDE 217


>AT4G05020.1 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 |
           chr4:2572752-2576222 FORWARD LENGTH=582
          Length = 582

 Score =  212 bits (540), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 120/142 (84%), Gaps = 1/142 (0%)

Query: 1   MKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSISRKSGLDIQFSEAECYK 60
           + +S Y++ ++SPRNYFAFTPLLPSVTCGTVEARSVVEPIR+I RK+ +D  + EAEC+K
Sbjct: 77  LNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIGRKN-VDTSYLEAECFK 135

Query: 61  IDPKNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDA 120
           IDP + KVYCRS Q     G +EFS+DYDYLVIA GA+SNTFN PGV+E+ HFLKEVEDA
Sbjct: 136 IDPASKKVYCRSKQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDA 195

Query: 121 QRIRQTVINLFERASLPSLSEE 142
           QRIR+TVI+ FE+ASLP LS+E
Sbjct: 196 QRIRKTVIDSFEKASLPELSDE 217


>AT2G20800.1 | Symbols: NDB4 | NAD(P)H dehydrogenase B4 |
           chr2:8953252-8955699 REVERSE LENGTH=582
          Length = 582

 Score =  191 bits (485), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 111/142 (78%), Gaps = 2/142 (1%)

Query: 1   MKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSISRKSGLDIQFSEAECYK 60
           + + +YD+ VVSPRN+F FTPLLPSVT GTVEARS+VEPIR + RK G   ++ EAEC K
Sbjct: 82  LNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPIRGLMRKKGF--EYKEAECVK 139

Query: 61  IDPKNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDA 120
           ID  N K++CRS +   L G  EF +DYD L++A+GA+ NTFNTPGV+EHA+FLKE EDA
Sbjct: 140 IDASNKKIHCRSKEGSSLKGTTEFDMDYDILILAVGAKPNTFNTPGVEEHAYFLKEAEDA 199

Query: 121 QRIRQTVINLFERASLPSLSEE 142
             IR +VI+ FERASLP+L+EE
Sbjct: 200 LNIRHSVIDCFERASLPNLTEE 221


>AT4G28220.1 | Symbols: NDB1 | NAD(P)H dehydrogenase B1 |
           chr4:13993078-13995651 FORWARD LENGTH=571
          Length = 571

 Score =  187 bits (474), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 87/139 (62%), Positives = 110/139 (79%)

Query: 4   SSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSISRKSGLDIQFSEAECYKIDP 63
           +SYD+ VVSP+NYFAFTPLLPSVTCGTVEARS+VE +R+I++K   +I+  EA+C+KID 
Sbjct: 71  TSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNITKKKNGEIELWEADCFKIDH 130

Query: 64  KNNKVYCRSGQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDAQRI 123
            N KV+CR          +EFSL YDYL++A+GA+ NTF TPGV E+ HFLKEVEDAQRI
Sbjct: 131 VNQKVHCRPVFKDDPEASQEFSLGYDYLIVAVGAQVNTFGTPGVLENCHFLKEVEDAQRI 190

Query: 124 RQTVINLFERASLPSLSEE 142
           R+ VI+ FE+A LP L+EE
Sbjct: 191 RRGVIDCFEKAILPGLTEE 209


>AT1G07180.1 | Symbols: ATNDI1, NDA1 | alternative  NAD(P)H
           dehydrogenase 1 | chr1:2204414-2206773 FORWARD
           LENGTH=510
          Length = 510

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 7/147 (4%)

Query: 1   MKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIR----SISRKSGLDIQFSEA 56
           + +S YD+  VSPRN+  FTPLL S   GT+E RSV EPI     +ISR+ G    +  A
Sbjct: 92  IDTSIYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQPAISREPG--SYYFLA 149

Query: 57  ECYKIDPKNNKVYCRS-GQDKKLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLK 115
            C K+D  N++V+C +  +      P +F + YD LV+A GA ++TF   GV E+A FL+
Sbjct: 150 NCSKLDADNHEVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTFGINGVLENAIFLR 209

Query: 116 EVEDAQRIRQTVINLFERASLPSLSEE 142
           EV  AQ IR+ ++     + +P + E+
Sbjct: 210 EVHHAQEIRRKLLLNLMLSEVPGIGED 236


>AT2G29990.1 | Symbols: NDA2 | alternative NAD(P)H dehydrogenase 2 |
           chr2:12793562-12795913 REVERSE LENGTH=508
          Length = 508

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 7/147 (4%)

Query: 1   MKSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIR----SISRKSGLDIQFSEA 56
           + ++ YD+  VSPRN+  FTPLL S   GT+E RSV EPI     +ISR+ G    F  A
Sbjct: 90  IDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQPAISREPG--SFFFLA 147

Query: 57  ECYKIDPKNNKVYCRSGQDK-KLGGPEEFSLDYDYLVIAMGARSNTFNTPGVQEHAHFLK 115
            C ++D   ++V+C +  D      P +F + YD LVIA GA ++TF   GV E+A FL+
Sbjct: 148 NCSRLDADAHEVHCETLTDGLNTLKPWKFKIAYDKLVIASGAEASTFGIHGVMENAIFLR 207

Query: 116 EVEDAQRIRQTVINLFERASLPSLSEE 142
           EV  AQ IR+ ++     +  P +S+E
Sbjct: 208 EVHHAQEIRRKLLLNLMLSDTPGISKE 234