Miyakogusa Predicted Gene

Lj3g3v2862510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2862510.1 tr|A9TIQ0|A9TIQ0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146163,46.51,1e-18, ,CUFF.44823.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20830.2 | Symbols:  | transferases;folic acid binding | chr2...    89   6e-19

>AT2G20830.2 | Symbols:  | transferases;folic acid binding |
           chr2:8968370-8970479 REVERSE LENGTH=431
          Length = 431

 Score = 89.0 bits (219), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 53/80 (66%)

Query: 1   MGLKVGFEVGEELGFYSGCLHIWTSAIRLDPNCFSSRAKTTINQMQDLVHKYPLMDPEDL 60
           +GLK+GFE GE +GFY GC  +W SA+R+DP  FS +    +N    L+ K PL+DPED 
Sbjct: 43  LGLKLGFETGELIGFYRGCSALWNSALRIDPTRFSPQLHKHLNDFHVLLDKIPLLDPEDE 102

Query: 61  QVQAIMDSLRLKFKMLCSSL 80
               I D LR+KF ++C+SL
Sbjct: 103 AKDGIKDDLRVKFSIICASL 122