Miyakogusa Predicted Gene
- Lj3g3v2862400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2862400.1 tr|G7JUI4|G7JUI4_MEDTR Xylosyltransferase
OS=Medicago truncatula GN=MTR_4g022240 PE=4
SV=1,50.52,2e-19,GLYCOSYLATION ENZYME-LIKE PROTEIN,NULL;
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER,NULL,CUFF.44820.1
(96 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G03340.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 156 3e-39
AT1G03520.2 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 139 4e-34
AT1G03520.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 139 6e-34
AT5G15050.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 110 2e-25
AT5G39990.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 108 5e-25
AT4G27480.2 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 79 5e-16
AT4G27480.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 79 5e-16
AT1G71070.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 75 7e-15
AT3G24040.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 70 3e-13
AT3G15350.2 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 65 6e-12
AT3G15350.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 65 6e-12
AT1G53100.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 64 1e-11
AT1G53100.2 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 60 3e-10
AT2G37585.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylgl... 58 1e-09
AT3G03690.1 | Symbols: UNE7 | Core-2/I-branching beta-1,6-N-acet... 54 3e-08
>AT4G03340.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr4:1467865-1469465 REVERSE LENGTH=448
Length = 448
Score = 156 bits (395), Expect = 3e-39, Method: Composition-based stats.
Identities = 69/94 (73%), Positives = 80/94 (85%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHGAWCVGTLDAGADPCS 61
SL+MKDF+KMVKS APFARKF K+DPVLDKID+E LGRTHRFS GAWC+G+ + GADPCS
Sbjct: 354 SLSMKDFDKMVKSKAPFARKFHKNDPVLDKIDRELLGRTHRFSSGAWCIGSSENGADPCS 413
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLSEEFQSKQC 95
VR +D+ PGPGAERL LLQ LLS+EF+ KQC
Sbjct: 414 VRGDDSALKPGPGAERLKELLQTLLSDEFRIKQC 447
>AT1G03520.2 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr1:877948-879286 REVERSE LENGTH=358
Length = 358
Score = 139 bits (350), Expect = 4e-34, Method: Composition-based stats.
Identities = 62/94 (65%), Positives = 74/94 (78%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHGAWCVGTLDAGADPCS 61
SL++KDF+ MVKS APFARKF K+DP LDKIDKE LGRTHRF+ G WCVG+ G D CS
Sbjct: 264 SLSLKDFDNMVKSKAPFARKFHKNDPALDKIDKELLGRTHRFAPGGWCVGSSANGNDQCS 323
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLSEEFQSKQC 95
V+ +D+V PGPG+ERL L+Q L SEEF+ KQC
Sbjct: 324 VQGDDSVLKPGPGSERLQELVQTLSSEEFRRKQC 357
>AT1G03520.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr1:877948-879553 REVERSE LENGTH=447
Length = 447
Score = 139 bits (349), Expect = 6e-34, Method: Composition-based stats.
Identities = 62/94 (65%), Positives = 74/94 (78%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHGAWCVGTLDAGADPCS 61
SL++KDF+ MVKS APFARKF K+DP LDKIDKE LGRTHRF+ G WCVG+ G D CS
Sbjct: 353 SLSLKDFDNMVKSKAPFARKFHKNDPALDKIDKELLGRTHRFAPGGWCVGSSANGNDQCS 412
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLSEEFQSKQC 95
V+ +D+V PGPG+ERL L+Q L SEEF+ KQC
Sbjct: 413 VQGDDSVLKPGPGSERLQELVQTLSSEEFRRKQC 446
>AT5G15050.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr5:4871820-4873454 REVERSE LENGTH=434
Length = 434
Score = 110 bits (275), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADPCS 61
LT+ DF++MV SNAPFARKF +D+PVLDKID E L R+H + G WC+GT + G+DPC+
Sbjct: 339 LTLDDFQRMVDSNAPFARKFRRDEPVLDKIDSELLFRSHGMVTPGGWCIGTRENGSDPCA 398
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLS-EEFQSKQC 95
V + +V PG GA+R+ L+ LLS E F+ +QC
Sbjct: 399 VIGDTSVIKPGLGAKRIEKLITYLLSTENFRPRQC 433
>AT5G39990.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr5:16004494-16006428 FORWARD LENGTH=447
Length = 447
Score = 108 bits (271), Expect = 5e-25, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGR-THRFSHGAWCVGTLDAGADPCS 61
LT+ D KMV SNAPFARKF ++DPVLDKID E L R + G WC+G+ + G+DPC+
Sbjct: 352 LTLTDMTKMVNSNAPFARKFRREDPVLDKIDDELLNRGPGMITPGGWCIGSHENGSDPCA 411
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLS-EEFQSKQC 95
V + V PGPGA RL L+ LLS E F+SKQC
Sbjct: 412 VIGDTDVIRPGPGARRLENLVTSLLSTENFRSKQC 446
>AT4G27480.2 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr4:13736835-13738317 REVERSE LENGTH=421
Length = 421
Score = 79.3 bits (194), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADPC 60
+LT+ D E+M+ S + F+RKF +DP LDKIDKE LGR + F+ G WC AG C
Sbjct: 330 ALTINDTERMIASGSAFSRKFRHNDPALDKIDKELLGRGNGNFTPGGWC-----AGEPKC 384
Query: 61 SVRCNDTVFSPGPGAERLHGLL-QVLLSEEFQSKQC 95
S + + PGPGA RL L+ +++L+ + +QC
Sbjct: 385 SRVGDPSKIKPGPGANRLRVLVSRLVLTSKLTQRQC 420
>AT4G27480.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr4:13736835-13738317 REVERSE LENGTH=421
Length = 421
Score = 79.3 bits (194), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADPC 60
+LT+ D E+M+ S + F+RKF +DP LDKIDKE LGR + F+ G WC AG C
Sbjct: 330 ALTINDTERMIASGSAFSRKFRHNDPALDKIDKELLGRGNGNFTPGGWC-----AGEPKC 384
Query: 61 SVRCNDTVFSPGPGAERLHGLL-QVLLSEEFQSKQC 95
S + + PGPGA RL L+ +++L+ + +QC
Sbjct: 385 SRVGDPSKIKPGPGANRLRVLVSRLVLTSKLTQRQC 420
>AT1G71070.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr1:26807440-26809152 REVERSE LENGTH=395
Length = 395
Score = 75.5 bits (184), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGR-THRFSHGAWCVGTLDAGADPCS 61
LT+ DF++M +S A FAR+F KDDPVLD +D+E L R +R + GAWC DPCS
Sbjct: 300 LTISDFDQMAQSGAAFARQFKKDDPVLDMVDREILKRGRYRVTPGAWCSSHSSWWTDPCS 359
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLSE-EFQSKQC 95
+ GP A++L + L + QS QC
Sbjct: 360 EWDEVNIVKAGPQAKKLDETITNFLDDLNSQSNQC 394
>AT3G24040.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr3:8681118-8683211 REVERSE LENGTH=417
Length = 417
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRT-HRFSHGAWCVGTLDAGADPCS 61
L K+F +MV S A FAR F DD VLD+ID E LGR G WC+G CS
Sbjct: 320 LDHKEFTEMVDSGAAFARGFRYDDTVLDRIDHELLGRKPGEVVPGGWCLGDSSKNRSSCS 379
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLSEE-FQSKQCL 96
V + + PG G++RL + LLS + F+ QC+
Sbjct: 380 VWGDSGILRPGSGSDRLERRIVELLSNDWFRLHQCV 415
>AT3G15350.2 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr3:5167250-5168882 FORWARD LENGTH=424
Length = 424
Score = 65.5 bits (158), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH---RFSHGAWCVGTLDAGADP 59
L++ D M+ S A FARKF +DD VL+KIDKE L R + F+ G WC +G
Sbjct: 332 LSLNDTMPMIWSGAAFARKFRRDDEVLNKIDKELLKRRNDKDSFTPGGWC-----SGKPK 386
Query: 60 CSVRCNDTVFSPGPGAERLHGLLQVLLSE 88
CS N P GA+RL GL+ L++E
Sbjct: 387 CSRVGNVAKIVPSFGAQRLQGLVTRLVNE 415
>AT3G15350.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr3:5167250-5168882 FORWARD LENGTH=424
Length = 424
Score = 65.5 bits (158), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH---RFSHGAWCVGTLDAGADP 59
L++ D M+ S A FARKF +DD VL+KIDKE L R + F+ G WC +G
Sbjct: 332 LSLNDTMPMIWSGAAFARKFRRDDEVLNKIDKELLKRRNDKDSFTPGGWC-----SGKPK 386
Query: 60 CSVRCNDTVFSPGPGAERLHGLLQVLLSE 88
CS N P GA+RL GL+ L++E
Sbjct: 387 CSRVGNVAKIVPSFGAQRLQGLVTRLVNE 415
>AT1G53100.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr1:19786990-19788504 REVERSE LENGTH=423
Length = 423
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHR--FSHGAWCVGTLDAGADPC 60
L+ +D KM+ S + F RKF ++D VLDKIDKE L R + F+ G WC G C
Sbjct: 332 LSQRDMGKMISSGSAFGRKFRRNDTVLDKIDKELLIRINEDGFTPGGWC-----GGKPEC 386
Query: 61 SVRCNDTVFSPGPGAERLHGLLQVLLSE-EFQSKQCL 96
SV + P GA RL L+ L++E + QC+
Sbjct: 387 SVVEDVARIRPSSGAVRLKELVDRLVTEAKLGKNQCV 423
>AT1G53100.2 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr1:19786937-19788504 REVERSE LENGTH=416
Length = 416
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHR--FSHGAWCVGTLDAGADPC 60
L+ +D KM+ S + F RKF ++D VLDKIDKE L R + F+ G WC G C
Sbjct: 332 LSQRDMGKMISSGSAFGRKFRRNDTVLDKIDKELLIRINEDGFTPGGWC-----GGKPEC 386
Query: 61 SVRCNDTVFSPGPGAERLHGLL 82
SV + P GA RL L+
Sbjct: 387 SVVEDVARIRPSSGAVRLKELV 408
>AT2G37585.1 | Symbols: | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr2:15765864-15767722 FORWARD LENGTH=384
Length = 384
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 18/96 (18%)
Query: 1 MSLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHGAWCVGTLDAGADPC 60
+++T+++F MV+S APFAR+F +DD VLDKID E LG+T D G +
Sbjct: 305 LNVTVENFRDMVQSGAPFAREFREDDLVLDKIDIELLGQT-------------DTGLE-- 349
Query: 61 SVRCNDTVFSPGPGAERLHGLLQVLLSEE-FQSKQC 95
++ D V P +RL L+ LL E F++KQC
Sbjct: 350 -LKTPDVV-KPTVSWKRLEKLMVRLLDHENFRAKQC 383
>AT3G03690.1 | Symbols: UNE7 | Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
| chr3:911494-913643 REVERSE LENGTH=378
Length = 378
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 20/73 (27%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHGAWCVGTLDAGADPCSV 62
L +D+ KMV SN PFARKF +DPVL++ID+E L R + G+ P
Sbjct: 304 LGTRDYRKMVMSNRPFARKFKSNDPVLNRIDREILRRKRKL------------GSKP--- 348
Query: 63 RCNDTVFSPGPGA 75
PGPGA
Sbjct: 349 -----DLGPGPGA 356