Miyakogusa Predicted Gene

Lj3g3v2851370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2851370.1 Non Chatacterized Hit- tr|C5XKS8|C5XKS8_SORBI
Putative uncharacterized protein Sb03g035120
OS=Sorghu,29.75,2e-18,seg,NULL; DUF688,Protein of unknown function
DUF688,CUFF.44818.1
         (680 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30990.2 | Symbols:  | Protein of unknown function (DUF688) |...   206   6e-53
AT2G30990.1 | Symbols:  | Protein of unknown function (DUF688) |...   206   6e-53
AT2G30990.3 | Symbols:  | Protein of unknown function (DUF688) |...   169   7e-42
AT1G29240.1 | Symbols:  | Protein of unknown function (DUF688) |...    96   1e-19

>AT2G30990.2 | Symbols:  | Protein of unknown function (DUF688) |
           chr2:13187776-13189761 REVERSE LENGTH=593
          Length = 593

 Score =  206 bits (523), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 155/440 (35%), Positives = 217/440 (49%), Gaps = 59/440 (13%)

Query: 1   MILNILMEENQLDFNQPLLSVRRFSSTVTSENENKRKINKSEAKRPPLPTYKSELKSGPV 60
           ++ +++MEE QLDFN+PL+S+RR + T  SE++ +   + +    P  P YKS++KSGPV
Sbjct: 2   LMGSLMMEEKQLDFNRPLISIRRPTQTSESESKTRSFDSVTNMIPPSPPVYKSDIKSGPV 61

Query: 61  SNPGTVPFEWEKTPGRPKNESKLQTKAIERPYMSPKLPPGRVVKAEQQYFDKVPKGASVT 120
            NPGTVPF+WE  PG+PK+E K   ++   P+  PKLPPGR    E     + P+     
Sbjct: 62  RNPGTVPFQWEHKPGKPKDERKPVLQSFVEPHFVPKLPPGRERVVE---LGRKPESTGAD 118

Query: 121 QSRTESAPSDSHSVSSWDDKVRKHKSRKEIVQENESSVSDDGDEAYLDALDTLSRSESFF 180
                 + SD + V    +  + + SR +   ++           YLDA DTLSR+ESFF
Sbjct: 119 HQTKTVSSSDKYLV----EDAKSNSSRYDDDDDDSDG-------TYLDATDTLSRTESFF 167

Query: 181 MNCS-VSGLSGWDDQE--VQPSESFSTDQQARDFMIGRFLPAAKAMVSETPPVQYNSRKP 237
            NCS VSG SG D     V+P  + STD+Q +D M+GRFLPAAKA+ SE+PP  + +RKP
Sbjct: 168 FNCSAVSGASGLDGSGILVEPFGTLSTDRQTQDLMMGRFLPAAKALTSESPP--HLARKP 225

Query: 238 IVKQEQQPRHLRKVVTGANSHPLNQKWQKVLPHYAQXXXXXXXXXXXXXXXXXXXXNYSA 297
              +E                P+ Q  +K      Q                      ++
Sbjct: 226 PKPEE----------------PVKQLMKKKQNKVEQNPYRFRHSPDQEEEDGNISSMMAS 269

Query: 298 KICGLFPRFCL------LNPIPGLRMND-------RILSSADDRVPGKSFASHRRTSKEH 344
            +CGL P+ CL      LNP+P +RM         R+ S   D  P     + +   K  
Sbjct: 270 GVCGLLPQLCLRSSLGLLNPVPSVRMQQQRAVSVRRMRSKYQDSAPSNETHNKQNEDKRK 329

Query: 345 AR---TANYGKRSVESQSGST----KEKDFLSVTENSKHGIDPHRKGFSTPFAREGNQNE 397
            +   +   G    ES S S+    KEK   +V   S+  I    K F    A + N  E
Sbjct: 330 LKLIESVAKGSSQGESLSVSSIPQGKEK-LENVGTASRSKIS---KNFGELLASDENTWE 385

Query: 398 SSSESPVAEKTLYVDSVQMV 417
            SSE+PVAEKTLYVD V +V
Sbjct: 386 PSSETPVAEKTLYVDIVHLV 405



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 12/75 (16%)

Query: 612 SESWLKRTLPTVSSRNTS-SW-SNLAS---NIHVPSQAPKTASLDPKWEIIVKSSNVHRG 666
           S+SWLKRTLPT+  +N S +W  +L +   N    +QA      +PKWE +VK+SN  +G
Sbjct: 525 SDSWLKRTLPTIPPKNNSFAWLQSLGTDDDNHFTKTQA------NPKWETMVKTSNTQQG 578

Query: 667 HLRFAEE-LTPIPEA 680
            + F++E L PIPE+
Sbjct: 579 FVCFSKETLNPIPES 593


>AT2G30990.1 | Symbols:  | Protein of unknown function (DUF688) |
           chr2:13187776-13189761 REVERSE LENGTH=593
          Length = 593

 Score =  206 bits (523), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 155/440 (35%), Positives = 217/440 (49%), Gaps = 59/440 (13%)

Query: 1   MILNILMEENQLDFNQPLLSVRRFSSTVTSENENKRKINKSEAKRPPLPTYKSELKSGPV 60
           ++ +++MEE QLDFN+PL+S+RR + T  SE++ +   + +    P  P YKS++KSGPV
Sbjct: 2   LMGSLMMEEKQLDFNRPLISIRRPTQTSESESKTRSFDSVTNMIPPSPPVYKSDIKSGPV 61

Query: 61  SNPGTVPFEWEKTPGRPKNESKLQTKAIERPYMSPKLPPGRVVKAEQQYFDKVPKGASVT 120
            NPGTVPF+WE  PG+PK+E K   ++   P+  PKLPPGR    E     + P+     
Sbjct: 62  RNPGTVPFQWEHKPGKPKDERKPVLQSFVEPHFVPKLPPGRERVVE---LGRKPESTGAD 118

Query: 121 QSRTESAPSDSHSVSSWDDKVRKHKSRKEIVQENESSVSDDGDEAYLDALDTLSRSESFF 180
                 + SD + V    +  + + SR +   ++           YLDA DTLSR+ESFF
Sbjct: 119 HQTKTVSSSDKYLV----EDAKSNSSRYDDDDDDSDG-------TYLDATDTLSRTESFF 167

Query: 181 MNCS-VSGLSGWDDQE--VQPSESFSTDQQARDFMIGRFLPAAKAMVSETPPVQYNSRKP 237
            NCS VSG SG D     V+P  + STD+Q +D M+GRFLPAAKA+ SE+PP  + +RKP
Sbjct: 168 FNCSAVSGASGLDGSGILVEPFGTLSTDRQTQDLMMGRFLPAAKALTSESPP--HLARKP 225

Query: 238 IVKQEQQPRHLRKVVTGANSHPLNQKWQKVLPHYAQXXXXXXXXXXXXXXXXXXXXNYSA 297
              +E                P+ Q  +K      Q                      ++
Sbjct: 226 PKPEE----------------PVKQLMKKKQNKVEQNPYRFRHSPDQEEEDGNISSMMAS 269

Query: 298 KICGLFPRFCL------LNPIPGLRMND-------RILSSADDRVPGKSFASHRRTSKEH 344
            +CGL P+ CL      LNP+P +RM         R+ S   D  P     + +   K  
Sbjct: 270 GVCGLLPQLCLRSSLGLLNPVPSVRMQQQRAVSVRRMRSKYQDSAPSNETHNKQNEDKRK 329

Query: 345 AR---TANYGKRSVESQSGST----KEKDFLSVTENSKHGIDPHRKGFSTPFAREGNQNE 397
            +   +   G    ES S S+    KEK   +V   S+  I    K F    A + N  E
Sbjct: 330 LKLIESVAKGSSQGESLSVSSIPQGKEK-LENVGTASRSKIS---KNFGELLASDENTWE 385

Query: 398 SSSESPVAEKTLYVDSVQMV 417
            SSE+PVAEKTLYVD V +V
Sbjct: 386 PSSETPVAEKTLYVDIVHLV 405



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 12/75 (16%)

Query: 612 SESWLKRTLPTVSSRNTS-SW-SNLAS---NIHVPSQAPKTASLDPKWEIIVKSSNVHRG 666
           S+SWLKRTLPT+  +N S +W  +L +   N    +QA      +PKWE +VK+SN  +G
Sbjct: 525 SDSWLKRTLPTIPPKNNSFAWLQSLGTDDDNHFTKTQA------NPKWETMVKTSNTQQG 578

Query: 667 HLRFAEE-LTPIPEA 680
            + F++E L PIPE+
Sbjct: 579 FVCFSKETLNPIPES 593


>AT2G30990.3 | Symbols:  | Protein of unknown function (DUF688) |
           chr2:13187776-13189761 REVERSE LENGTH=563
          Length = 563

 Score =  169 bits (427), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 204/439 (46%), Gaps = 87/439 (19%)

Query: 1   MILNILMEENQLDFNQPLLSVRRFSSTVTSENENKRKINKSEAKRPPLPTYKSELKSGPV 60
           ++ +++MEE QLDFN+PL+S+RR + T  SE++ +   + +    P  P YKS++KSGPV
Sbjct: 2   LMGSLMMEEKQLDFNRPLISIRRPTQTSESESKTRSFDSVTNMIPPSPPVYKSDIKSGPV 61

Query: 61  SNPGTVPFEWEKTPGRPKNESKLQTKAIERPYMSPKLPPGRVVKAEQQYFDKVPKGASVT 120
            NPGTVPF+WE  PG+PK+E K   ++   P+  PKLPPGR    E     + P+     
Sbjct: 62  RNPGTVPFQWEHKPGKPKDERKPVLQSFVEPHFVPKLPPGRERVVE---LGRKPEST--- 115

Query: 121 QSRTESAPSDSHSVSSWDDKVRKHKSRKEIVQENESSVSDDGDEAYLDALDTLSRSESFF 180
                 A   + +VSS D         K +V++ +S+ S                     
Sbjct: 116 -----GADHQTKTVSSSD---------KYLVEDAKSNSSR-------------------- 141

Query: 181 MNCSVSGLSGWDDQE--VQPSESFSTDQQARDFMIGRFLPAAKAMVSETPPVQYNSRKPI 238
              +VSG SG D     V+P  + STD+Q +D M+GRFLPAAKA+ SE+PP  + +RKP 
Sbjct: 142 ---AVSGASGLDGSGILVEPFGTLSTDRQTQDLMMGRFLPAAKALTSESPP--HLARKPP 196

Query: 239 VKQEQQPRHLRKVVTGANSHPLNQKWQKVLPHYAQXXXXXXXXXXXXXXXXXXXXNYSAK 298
             +E                P+ Q  +K      Q                      ++ 
Sbjct: 197 KPEE----------------PVKQLMKKKQNKVEQNPYRFRHSPDQEEEDGNISSMMASG 240

Query: 299 ICGLFPRFC------LLNPIPGLRMND-------RILSSADDRVPGKSFASHRRTSKEHA 345
           +CGL P+ C      LLNP+P +RM         R+ S   D  P     + +   K   
Sbjct: 241 VCGLLPQLCLRSSLGLLNPVPSVRMQQQRAVSVRRMRSKYQDSAPSNETHNKQNEDKRKL 300

Query: 346 R---TANYGKRSVESQSGST----KEKDFLSVTENSKHGIDPHRKGFSTPFAREGNQNES 398
           +   +   G    ES S S+    KEK   +V   S+  I    K F    A + N  E 
Sbjct: 301 KLIESVAKGSSQGESLSVSSIPQGKEK-LENVGTASRSKIS---KNFGELLASDENTWEP 356

Query: 399 SSESPVAEKTLYVDSVQMV 417
           SSE+PVAEKTLYVD V +V
Sbjct: 357 SSETPVAEKTLYVDIVHLV 375



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 12/75 (16%)

Query: 612 SESWLKRTLPTVSSRNTS-SW-SNLAS---NIHVPSQAPKTASLDPKWEIIVKSSNVHRG 666
           S+SWLKRTLPT+  +N S +W  +L +   N    +QA      +PKWE +VK+SN  +G
Sbjct: 495 SDSWLKRTLPTIPPKNNSFAWLQSLGTDDDNHFTKTQA------NPKWETMVKTSNTQQG 548

Query: 667 HLRFAEE-LTPIPEA 680
            + F++E L PIPE+
Sbjct: 549 FVCFSKETLNPIPES 563


>AT1G29240.1 | Symbols:  | Protein of unknown function (DUF688) |
           chr1:10217023-10218924 REVERSE LENGTH=577
          Length = 577

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 143/344 (41%), Gaps = 63/344 (18%)

Query: 7   MEENQLDFNQPLLSVRRFSSTVT-----SENENKRKINKSEAKRPPLPTYKSELKS--GP 59
           MEE +L+F+ PLLS RR   T       +++ N    +   ++ P +P     +      
Sbjct: 1   MEERKLNFSVPLLSTRRMQKTAGVSVRRNKSNNFTDYDSKTSECPSVPVLVPYMMGLDDE 60

Query: 60  VSNPGTVPFEWEKTPGRPK-NESKLQTKAI---ERPYMSPKLPPGRVVKAEQQYFDKVPK 115
           V+ P +VPF WE+ PGR K N+ K Q   +   E    +P LPPG              K
Sbjct: 61  VTEPASVPFTWEQAPGRLKGNDFKPQVCVLMKEEEQVFTPCLPPG--------------K 106

Query: 116 GASVTQSRTESAPSDSHSVSSWDDKVRKHKSRKEIVQENESSVSDDGDEAYLDALDTLSR 175
                 +R +S+                         +      DD D+ + DALDTLS 
Sbjct: 107 AVDANMTRLQSSKG-----------------------KQVEESDDDEDDVFSDALDTLSP 143

Query: 176 SESFFMNCSVSGLSGWDDQEVQPSESFSTDQQARDFMIGRFLPAAKAMVSETPPVQYNSR 235
            +SF  N S+SG+S +   E +       D Q+RDFM+ RFLPAAKAM  E      N R
Sbjct: 144 KDSFSFNNSISGVSEYGGVETKK----PLDAQSRDFMMSRFLPAAKAMTVEQSHYASN-R 198

Query: 236 KPIVKQEQQPRHLRKVVTGANSHPLNQKWQKVLP--HYAQXXXXXXXXXXXXXXXXXXXX 293
           KP     +    +R++V G      N+    ++P  +Y Q                    
Sbjct: 199 KPSTFMAEPTIQIRELVPGEKQQTPNRYDVSIVPSYYYHQDIDDEESKVGEEDDEVSEYA 258

Query: 294 NYSAKICGLFPRFC------LLNPIPGLRM--NDRILSSADDRV 329
             S + CG+ P+ C      +LN +PG +   N  I S + D+V
Sbjct: 259 YLSKRGCGMLPQLCFKDSLGMLNTVPGFKAKHNSPITSPSHDQV 302