Miyakogusa Predicted Gene

Lj3g3v2848940.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2848940.3 Non Chatacterized Hit- tr|K4CFM9|K4CFM9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,27.82,1e-17,seg,NULL,CUFF.44801.3
         (393 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31130.1 | Symbols:  | unknown protein; Has 116 Blast hits to...    59   6e-09

>AT2G31130.1 | Symbols:  | unknown protein; Has 116 Blast hits to
          113 proteins in 44 species: Archae - 0; Bacteria - 3;
          Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0;
          Other Eukaryotes - 50 (source: NCBI BLink). |
          chr2:13263829-13265534 REVERSE LENGTH=419
          Length = 419

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 7/75 (9%)

Query: 3  MDIKGITWVGNMYQKFENXXXXXXXXXXXXXXKYME---KTVGESVKKIYSDVMQDLVPP 59
          MD KGI WVGN+YQKFE               KY+E   +TVG SVKK  SDV+ DL+P 
Sbjct: 1  MDFKGIKWVGNVYQKFEAMCLEVEEIIVQDTAKYVENQVQTVGNSVKKFCSDVVHDLLPD 60

Query: 60 SSCHLGEKQVPELPV 74
           S   G+     LPV
Sbjct: 61 ESVDSGK----PLPV 71