Miyakogusa Predicted Gene

Lj3g3v2848860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2848860.1 Non Chatacterized Hit- tr|I1LUL4|I1LUL4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,79.16,0,no
description,NULL; seg,NULL; Ferredoxin reductase-like, C-terminal
NADP-linked domain,NULL,CUFF.44795.1
         (552 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18540.1 | Symbols:  | unknown protein; Has 209 Blast hits to...   488   e-138

>AT4G18540.1 | Symbols:  | unknown protein; Has 209 Blast hits to
           205 proteins in 54 species: Archae - 0; Bacteria - 17;
           Metazoa - 2; Fungi - 150; Plants - 40; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr4:10221203-10223028 REVERSE LENGTH=520
          Length = 520

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 283/568 (49%), Positives = 346/568 (60%), Gaps = 82/568 (14%)

Query: 12  RFSSCRGVAFEINPNKASPFAIESPPKKQ----DRTGT--WLWLPWTSRNNSFKVLPHSH 65
           RFSSCRGVAFEI PN A+PFA+ +  + +    +R GT     LPW    N+ KV+P S 
Sbjct: 8   RFSSCRGVAFEIKPN-ANPFAVVTTDQNRNVNAEREGTSSRFRLPWDFMRNASKVVPSS- 65

Query: 66  NTISPTRSRASSSHFCXXXXXXXXXXXXXXXXXXXVQ-----------DIEKRTEKANGV 114
             I  + SRASS HFC                    +           + E++   A+  
Sbjct: 66  --IEHSMSRASS-HFCDLDPDNDDEEEEKDDIFYLEEGGIKEGNEEHNETEEKAMLASSA 122

Query: 115 VKAD------PXXXXXXXXXXXXXFDQG-FTVYKWLFLVSLTLNLVALSLSAAGYFPYAE 167
            K        P              DQG FTVYK LF++SL+LN++AL L+A G F YA 
Sbjct: 123 SKHSEKPQQPPIPKKRPSRLSIILLDQGLFTVYKHLFVLSLSLNVLALVLAATGNFAYAR 182

Query: 168 KKAALFSIGNILALTLCRSEAVLRIVFWFTVKTIGRSFVPLRMKTATTSFLQSIGGIHSG 227
            +AALFSI NILAL LCRSEA LR+VF+ TVK +G SFVPLR+K A T+ LQS+GGIHSG
Sbjct: 183 NRAALFSIANILALILCRSEAFLRLVFYLTVKLLGHSFVPLRIKIAVTALLQSLGGIHSG 242

Query: 228 CGVSSIAWLVYSLVLTLKNRDKTSPEIVGVAFTXXXXXXXXXXA-AFPLFRHLHHNVFER 286
           CGVSS+AWL+Y+LVLTLK+RD TS  I+ VA T            AF +           
Sbjct: 243 CGVSSVAWLIYALVLTLKDRDNTSTAIIAVASTILSLLCLTCLVWAFVIL---------- 292

Query: 287 IHRFSGWMAXXXXXXXXXXXXSYDPSSKTY-DLTISKVIKKQECWLTLAITILIVIPWIS 345
                                SYDP S++Y D   SK+IK QE W TL ITI I++PW++
Sbjct: 293 -------------------TVSYDPKSRSYTDDLGSKLIKTQEFWFTLVITIAILLPWLT 333

Query: 346 VRKVPVSVSAPSGHASLIKFEGGVQAGLLGRISPSPLSEWHAFGIISDGKKDHMMLAGAV 405
           VR+VPV VS+ SGHASLIKF GG+++G+LGRISPSPLSEWHAFGIISDGK  HMMLAGAV
Sbjct: 334 VRRVPVDVSSLSGHASLIKFRGGLKSGILGRISPSPLSEWHAFGIISDGKTSHMMLAGAV 393

Query: 406 GDFTKSLVSNPPKHLWVRAIHFAGLPYLVNLYQRVLLVATGSGICVFLSFLLQKSHADVC 465
           GDFTKSLVS PP HLWVR +HFAGLPYLVNLY +VLLV    G   F  FL  +      
Sbjct: 394 GDFTKSLVSKPPTHLWVRTVHFAGLPYLVNLYDKVLLVPRVRGFAYFYRFLCNR------ 447

Query: 466 LIWVAKDIELNFGKEMRELVDRYP-KEKVVVHDTAVSGRPNVADMSVNAAIKWNVEVVIV 524
                          +R  +  YP +++++VHDTA+ GRPNV+ MSV A+ K+  +VVIV
Sbjct: 448 ---------------VRLRIKDYPHQDRIIVHDTAILGRPNVSKMSVEASKKFGAQVVIV 492

Query: 525 TSNPEGSRDVVRACNRAKIPAFGPIWDS 552
           TSNPEGSRDVV AC  + +PAFGPIWDS
Sbjct: 493 TSNPEGSRDVVNACKASGVPAFGPIWDS 520