Miyakogusa Predicted Gene
- Lj3g3v2838530.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2838530.2 Non Chatacterized Hit- tr|C0PLG1|C0PLG1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,26.92,0.000000000000005,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; coiled-coil,NULL; PPR,Pentatricopeptide
r,CUFF.44762.2
(342 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 77 2e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 2e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 66 3e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 65 7e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 1e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 4e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 57 1e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 6e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 55 1e-07
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 52 4e-07
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 51 9e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 50 3e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 49 5e-06
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 49 7e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 9e-06
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/318 (57%), Positives = 243/318 (76%), Gaps = 1/318 (0%)
Query: 26 RLVSSLQKVEQAVRAEVEAKNYIKIPDLLMSL-ESCQXXXXXXXXXXXXQTLQVQIVDEM 84
R +SS + VE+A++ VE K Y++IP+L++SL E Q + +++++DE+
Sbjct: 26 RSISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEI 85
Query: 85 LQSFIPLRPRSKPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAW 144
LQSF+P+RPRS P++ YS +L+Y LQSS P P++ A+LQRTLRSGCLP PQTH+LLS AW
Sbjct: 86 LQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAW 145
Query: 145 LDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPD 204
L+RR SVA+I+ EM IGY PD GTCNYL+SSLCAVD+L EA+KV++ M AGCIPD
Sbjct: 146 LERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPD 205
Query: 205 SNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMI 264
SYG VI ++C RKT++ ++K+MV K G++P +G L + AALRANR+I +AIEMI
Sbjct: 206 VESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMI 265
Query: 265 EFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASI 324
EF+E Y V FESYEVV+EGCLE REY+LAGKVV+RMT+RGFIPYI+VRQK++E L +I
Sbjct: 266 EFVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINI 325
Query: 325 NEWKIACAVRQRFAALKS 342
EWK+AC VRQR + L+S
Sbjct: 326 GEWKLACTVRQRVSELRS 343
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDR--RLLPLSVANILLE-MPSIGYHPDCGTCN 174
AL VL R+G P ++L+ + +D R L A LE M +G P+ T N
Sbjct: 261 ALKVLTLMQRAGVEP----NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316
Query: 175 YLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVK 234
++ C + ++ EA+++L+ M GC+PD SY ++G +C+ ++ E +DLMK+M +
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Query: 235 YGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVL 294
+GL P Q T L L + +A+ ++ +++G+ + Y ++ ++
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Query: 295 AGKVVIRMTERGFIP 309
A ++ M +G P
Sbjct: 437 AKDLINEMLSKGHCP 451
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 2/222 (0%)
Query: 113 HPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEM-PSIGYHPDCG 171
H A+ +L+ GCLP ++ + +L + + V +++ +M G PD
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIM-GYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 172 TCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQM 231
T N L+ L D EA+ LK G D Y ++ A+C+ + SEA+DL+ +M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 232 VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
+ K P T + ++ +A ++++ + G+ SY ++ G +
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 292 YVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+ A +++ E + P I+ GL + AC V
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 176 LLSSLCAVDQLAEAVKVLKGMGGAG-CIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVK 234
++ +LC +++EA ++ M G C PD +Y V+ CR+ + +A+ L+ Q++
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL-QVMHT 482
Query: 235 YGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVL 294
+G P + L + +A EM+ E+ +S +Y V++ G + +
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 295 AGKVVIRMTERGFIP 309
A VV M +GF P
Sbjct: 543 ACDVVREMVLKGFFP 557
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 100 AYSYI-LSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANIL 158
AYSY L + L S A+ V +R + G P QT+ L RR + SV +L
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID-SVMGLL 246
Query: 159 LEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRV 218
EM ++G P+ T + L ++ EA ++LK M GC PD +Y ++I A+C
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 219 RKTSEAQDLMKQMVVKYG-LTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFE 277
RK A+++ ++M K G P + T + L NRD+ + +EK+G+
Sbjct: 307 RKLDCAKEVFEKM--KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 278 SYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
++ ++++ + + A + M ++G +P + +I GL ++ A
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 20/270 (7%)
Query: 76 LQVQIVDEMLQSFIPLRPRSKPQLAYSYI--LSYTLQSSHPFPVALAVLQRTLRSGCLP- 132
L+V +D+ L+ F + AY+YI + Y +S AL ++ G P
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS-ALETFEKMKTKGIAPN 467
Query: 133 ---VPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEA 189
+ L+ A DR I + IG PD T N ++ V ++ EA
Sbjct: 468 IVACNASLYSLAKAGRDRE-----AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 190 VKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL---MKQMVVKYGLTPGQGTLVG 246
+K+L M GC PD +I + + + EA + MK+M +K P T
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK----PTVVTYNT 578
Query: 247 LFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERG 306
L A L N I++AIE+ E + ++G ++ + + + E LA K++ +M + G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 307 FIPYIRVRQKIIEGLASINEWKIA-CAVRQ 335
+P + II GL + K A C Q
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 2/175 (1%)
Query: 97 PQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVAN 156
P + +L L ++ A V ++ P T++ L + D R L SV
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQ 349
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
EM G+ PD T L+ +LC EA L M G +P+ ++Y +I +
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
RV + +A +L M G+ P T + + D A+E E ++ +G
Sbjct: 410 RVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 129 GCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAE 188
G P T+ LL L+ ++ ++ ++ L++ S G PD T N+LL + ++ E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIA-QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 189 AVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLF 248
++ K M C ++ ++ IVI + + +A DL ++ +P T L
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 249 AALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFI 308
L + + +A ++ E + G Y ++I G + E A + RM + G
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 309 PYIRVRQKIIEGLASI 324
P ++ +++ L +
Sbjct: 959 PDLKTYSVLVDCLCMV 974
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 99 LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANIL 158
+ Y+ IL +L S A+ VL R L+ C P T+ +L A R +L
Sbjct: 205 VTYNTILR-SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC-RDSGVGHAMKLL 262
Query: 159 LEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRV 218
EM G PD T N L++ +C +L EA+K L M +GC P+ ++ I++ +MC
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 219 RKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFES 278
+ +A+ L+ M+ K G +P T L L + +AI+++E + + G S
Sbjct: 323 GRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 279 YEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
Y ++ G ++++ A + + RM RG P I ++ L
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 118 ALAVLQRTLRSGCLPV-----PQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGT 172
A+ +L++ + GC P P H +DR + L M S G +PD T
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI------EYLERMVSRGCYPDIVT 416
Query: 173 CNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMV 232
N +L++LC ++ +AV++L + GC P +Y VI + + KT +A L+ +M
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 233 VKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREY 292
K L P T L L + +AI+ E+ G ++ ++ G + R+
Sbjct: 477 AK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 293 VLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
A ++ M RG P +IEGLA
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLL------SSAWLDRRLLPLSVANILLEMPSIGYHPDCG 171
A+ L SGC P TH ++ + W+D +L +M G+ P
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD-------AEKLLADMLRKGFSPSVV 345
Query: 172 TCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQM 231
T N L++ LC L A+ +L+ M GC P+S SY ++ C+ +K A + +++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 232 VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
V + G P T + AL + + A+E++ L +G S +Y VI+G + +
Sbjct: 406 VSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 292 YVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVR 334
A K++ M + P ++ GL+ E K+ A++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLS--REGKVDEAIK 505
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 5/194 (2%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A +L+ SG +P T+ ++ S + + N L + + PD T N +L
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCK----AGEINNALSVLDRMSVSPDVVTYNTIL 211
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
SLC +L +A++VL M C PD +Y I+I A CR A L+ +M + G
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GC 270
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
TP T L + + +AI+ + + G ++ +++ ++ A K
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 298 VVIRMTERGFIPYI 311
++ M +GF P +
Sbjct: 331 LLADMLRKGFSPSV 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 166 YH---PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTS 222
YH PD C L+ C + + +A K+L+ + G+G +PD +Y ++I C+ + +
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 223 EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIE-FLEKEGYSVGFESYEV 281
A ++ +M V +P T + +L + ++QA+E+++ L+++ Y +Y +
Sbjct: 190 NALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTI 244
Query: 282 VIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+IE A K++ M +RG P + ++ G+
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 6/222 (2%)
Query: 113 HPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGT 172
PF +L V + C P + +V + + ++ L L+ M IG P +
Sbjct: 101 RPFD-SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAF-KFYKNMREIGLPPTVAS 158
Query: 173 CNYLLSSLCAVDQLAEA-VKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQM 231
N L+ +LC D +A +K+ M GC PDS +YG +I +CR + EA+ L +M
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 232 VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
V K P T L L ++++ +A+ +E ++ +G +Y +++G +
Sbjct: 219 VEK-DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 292 YVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+ A ++ M RG P + +I GL E KI AV
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCK--EQKIQEAV 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
I LEMP G PD T L+S LC ++ EA K+ M C P +Y +I +C
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ EA +++M K G+ P T L L + QA+E+ E + G
Sbjct: 239 GSKNVDEAMRYLEEMKSK-GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
+Y +I G ++++ A +++ RM +G P + K+I G +I++++ A
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M + G P+ T L++ LC ++ EAV++L M G PD+ YG VI C + K
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 221 TSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIR--------QAIEMIEFLEKEGY 272
EA + + +M++ G+TP + L +N +R +A + + G
Sbjct: 348 FREAANFLDEMILG-GITPNR--LTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGI 404
Query: 273 SVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
SV E+ E +++ +K E+ A ++V + G IP
Sbjct: 405 SVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIP 441
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 118 ALAVLQRTLRSGCLPVPQT-HVLLSSAWLDRRLLPLSVANILL-EMPSIGYHPDCGTCNY 175
A ++LQ +R+ CLP T ++LL S W ++ +S A LL +M GY D TCN
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLW---KMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 176 LLSSLCAVDQLAEAVKVLKGM--------GGAG---------------CIPDSNSYGIVI 212
++ LC +L +A++++KGM G G C+PD +Y ++
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 213 GAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGY 272
+C+ + +EA++L +M+ + L P I A +++ +EK+G
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEK-LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 273 SVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
E+Y +I G K + ++ M E+G P I
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVAN-------ILLEMPSIGYHPDC 170
A VL+ + GC +T+ L +L L + N ++ EM G P+
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSL--------ILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 171 GTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQ 230
T N + LC +++ +A +L M P+ S+ +I A C+V AQ++ +
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Query: 231 MVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKR 290
V G G +L +F L A + +A E++E + G+ +G Y+ ++E +K
Sbjct: 690 AVSICGQKEGLYSL--MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKD 747
Query: 291 EYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQRFAALKS 342
E +A ++ +M +RG+ +I+GL + K A + + + S
Sbjct: 748 ELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L +M G P + N L+ LC + L++A ++ M G PD+ +YG ++ C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
V K A+ L+++M ++ P T L +L I +A E++ + ++GY +
Sbjct: 408 SVGKVDAAKSLLQEM-MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERG 306
+ ++++G E A ++V M G
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 1/163 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T + LL+ LC + AEA + M G PDS +Y I I C+ K S A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
+K M K G T L L I + +++ ++++G S +Y I+
Sbjct: 582 LKDM-EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
E + A ++ M ++ P + + +IE + ++ +A
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 4/231 (1%)
Query: 97 PQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVAN 156
PQ +L L S A + GC P T +L + L +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE- 203
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L M S G P+ N ++SS C + ++ K+++ M G +PD ++ I A+C
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 217 RVRKTSEAQDLMKQMVVKYGLT---PGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYS 273
+ K +A + M + L P T + + A + E + +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 274 VGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASI 324
+SY + ++G + +++ A V+ +MT++G P I +++GL +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 4/241 (1%)
Query: 91 LRPRSKPQLA-YSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRL 149
++ R P + +S +LS + + F + +++ ++ G T+ +L + + R
Sbjct: 73 VKSRPFPSIVEFSKLLS-AIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 150 LPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYG 209
L L++A +L +M +GY PD T N LL+ C +++++AV ++ M G PDS ++
Sbjct: 132 LSLALA-VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 210 IVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEK 269
+I + R + SEA L+ +MVVK G P T + L DI A+ +++ +E+
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 270 EGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKI 329
G Y +I+ + A + M +G P + +I L + W
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 330 A 330
A
Sbjct: 310 A 310
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 7/179 (3%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM PD T + L++ C D+L EA + + M C P+ +Y +I C+ +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ E +L ++M + GL T L R+ A + + + +G +Y
Sbjct: 411 RVDEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFI-PYIRVRQKIIEGLASINE----WKIACAV 333
++++G L V VV +R + P I +IEG+ + W + C++
Sbjct: 470 SILLDG-LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM S G PD T N L+ SLC+ +L EA+ +LK M +GC +Y +I C+
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
KT EA+++ +M V +G++ T L L +R + A ++++ + EG +Y
Sbjct: 485 KTREAEEIFDEMEV-HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
++ + A +V MT G P I +I GL ++A
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
GY PD T N ++S LC + ++ EAV+VL M C P++ +Y +I +C+ + EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
+L + + K G+ P T L L R+ R A+E+ E + +G +Y ++I+
Sbjct: 385 TELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
K + A ++ +M G + +I+G N+ + A
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 153 SVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVI 212
A ++ +M G PD T N LL+ C + +A +++ M GC PD +YG +I
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 213 GAMCRVRKTSEAQDLMKQMVVK-YGLTPGQGTLV--GLFAALRANRDIRQAIEMIEFLEK 269
+C+ + A L++ + +K LTP V GLF + I EM+E E
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 270 EGYSVGFESYEVVIEG-CLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASIN 325
+V SY +V G C A ++ + E+GF+P + EGL +++
Sbjct: 643 PPDAV---SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLS 696
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L +MPS G PD T ++ L A+++ + M GC + S +++ C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ + +A + +++M + G P Q T L L ++ AIE+++ + +EGY
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
+Y VI G + E A +V+ +M R P +I L N+
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLE---MPSIGYHPDCGTCN 174
ALA R C P + + +A R+ A LL+ +P Y PD T
Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALC--RVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 175 YLLSSLCAVD-----------QLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSE 223
L+SS C ++ EA ++ + M G +PD +Y +I C+ +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 224 AQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSV-GFESYEVV 282
A +L + M K G P Q T +I AIEM+ ++K G+ V G +Y +
Sbjct: 302 ALELFEDMKTK-GCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPL 360
Query: 283 IEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLAS 323
I +E R A +V+ M E G +P + + + L+S
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSS 401
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A+ V + CLP T+ L + +V +L EM S G P N L+
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLI 264
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
LC L K++ M GC+P+ +Y +I +C K +A L+++MV +
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T L L R A+ ++ +E+ GY + Y V+I G ++ + A
Sbjct: 325 -PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 298 VVIRMTERGFIPYIRVRQKIIEGL 321
+ +M E+G P I V +++GL
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGL 407
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A+++L+R + S C+P T+ L + + +R +V +L M GYH + + L+
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV-RLLSSMEERGYHLNQHIYSVLI 369
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
S L + EA+ + + M GC P+ Y +++ +CR K +EA++++ +M+ G
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GC 428
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T L +A+++ + ++K G S Y V+I+G A
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
V +M G P II+GL I A
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 96 KPQLA-YSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSV 154
KP + YS ++ + P A +L R + SGCLP T+ L + L +V
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNE-AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 155 ANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGA 214
+ EM G + + L+ LC V ++ EA+ V M G PD+ +Y +I
Sbjct: 453 -QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 215 MCRVRKTSEAQDLMKQMVVKY--GLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
+C + A L +M+ + P T L L +DI +A++++ + G
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A+ + R GC P + + + L + + + + +M G+ P+ T N LL
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM-IYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+LC +++ A K+L M GC PD+ SY VI +MC V E ++L ++
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER------F 242
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P L L D + A E++ + ++G S SY +I + LA
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 298 VVIRMTERGFIPYIRVRQKIIEG 320
+ +M +RG P I +++G
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKG 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 7/230 (3%)
Query: 99 LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDR--RLLPLSVAN 156
++YS +++ L +S +A + L + L+ GC P T L R L + N
Sbjct: 282 ISYSTLIN-VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++ G P+ N L+ C+ + +AV V M GC P+ +YG +I
Sbjct: 341 QMIR--GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ A + +M+ G P + AL + ++A +IE + KE +
Sbjct: 399 KRGSLDGAVYIWNKMLTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFI-PYIRVRQKIIEGLASIN 325
++ I+G + A KV +M ++ P I ++++GLA N
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++ EM G P+ + + L++ LC Q+ A L M GC P+ + ++ C
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-C 326
Query: 217 RVRKTS-EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+R T+ +A DL QM+ +GL P L ++ +I +A+ + +E+ G S
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386
Query: 276 FESYEVVIEGCLEKREYVLAGKVVI--RMTERGFIPYIRVRQKIIEGLASINEWKIA 330
+Y +I G ++ L G V I +M G P + V ++E L +++K A
Sbjct: 387 IRTYGSLINGFAKRGS--LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M S G P+ T N L++ C D L EA+ + + G G +P + Y ++I A C++
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
K + L ++M + G+ P GT L A L N +I A ++ + L +G ++
Sbjct: 416 KIDDGFALKEEM-EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTF 473
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
+++EG K E A ++ M++ G P +++G K A +R +
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
AL + G +P + + +L A+ + A + EM G PD GT N L+
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA-LKEEMEREGIVPDVGTYNCLI 443
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ LC + A K+ + G +PD ++ I++ CR ++ +A L+K+M K GL
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMS-KMGL 501
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG-YSVGFESYEVVIEGCLEKREYVLAG 296
P T + +++ A M +EKE + SY V+++G +K + A
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 297 KVVIRMTERGFIPYIRVRQKIIE 319
++ M E+G +P R+ +I++
Sbjct: 562 MLLNEMLEKGLVPN-RITYEIVK 583
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 118 ALAVLQRTLRSGCLPVPQT-HVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
A AVL+ + + P T ++L+ W D L P S+ + EM P+ + N L
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL-PGSMK-VFKEMLDQDVKPNVISYNSL 337
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYG 236
++ LC +++EA+ + M AG P+ +Y +I C+ D++K+ + +G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK-------NDMLKEALDMFG 390
Query: 237 LTPGQGT---------LVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
GQG L+ + L I + E +E+EG +Y +I G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGK---IDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQRFAAL 340
A K+ ++T +G +P + ++EG E + A + + + +
Sbjct: 448 RNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
GY +C L+ +L ++ A+ V K M P+ ++ +VI A+C+ K ++A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 225 QDLMKQMVVKYGLTPG---QGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEV 281
+D+M+ M V YG +P TL+ + L N + +A +++ + + S ++ +
Sbjct: 243 RDVMEDMKV-YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 282 VIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
+I+G + + KV M ++ P + +I GL N KI+ A+ R
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC--NGGKISEAISMR 354
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A+ L + G P +T+ L + + + +L EM G+ P T N L+
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN-EAYRVLREMNDNGFSPSVVTYNALI 422
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ C ++ +A+ VL+ M G PD SY V+ CR EA + ++MV K G+
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GI 481
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI-----EGCLEKREY 292
P T L R ++A ++ E + + G +Y +I EG LEK
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK--- 538
Query: 293 VLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
A ++ M E+G +P + +I GL
Sbjct: 539 --ALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L +M G PD + + +LS C + EA++V + M G PD+ +Y +I C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R+T EA DL ++M+ + GL P + T L A D+ +A+++ + ++G
Sbjct: 497 EQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
+Y V+I G ++ A ++++++ +P +IE ++I E+K ++ +
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI-EFKSVVSLIKG 614
Query: 337 F 337
F
Sbjct: 615 F 615
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 35/269 (13%)
Query: 99 LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANIL 158
L+Y+ +L T++S A V + L S P T+ +L + + +++ +
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT-LF 228
Query: 159 LEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRV 218
+M + G P+ T N L+ C + ++ + K+L+ M G P+ SY +VI +CR
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 219 RKTSEAQDLMKQM----------------------------------VVKYGLTPGQGTL 244
+ E ++ +M ++++GLTP T
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 245 VGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTE 304
L ++ ++ +A+E ++ + G +Y +++G +K A +V+ M +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 305 RGFIPYIRVRQKIIEGLASINEWKIACAV 333
GF P + +I G + + A AV
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 3/205 (1%)
Query: 118 ALAVLQRTLRSGCLP-VPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
AL+++ G +P V + +L + +R + + N+ EM P+ T N L
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA-ENVFKEMLESQVSPNVFTYNIL 211
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYG 236
+ C + A+ + M GC+P+ +Y +I C++RK + L++ M +K G
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-G 270
Query: 237 LTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAG 296
L P + + L +++ ++ + + GYS+ +Y +I+G ++ + A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 297 KVVIRMTERGFIPYIRVRQKIIEGL 321
+ M G P + +I +
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSM 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM G P T L+ S+C + A++ L M G P+ +Y ++ +
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+EA ++++M G +P T L + AI ++E ++++G S SY
Sbjct: 395 YMNEAYRVLREMN-DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
V+ G + A +V M E+G P +I+G K AC + +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A VL G P L SA+ +P +V I EMP G PD T N L+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE-IFREMPRKGCKPDVYTFNSLI 501
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
S LC VD++ A+ +L+ M G + ++ +Y +I A R + EA+ L+ +MV + G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ-GS 560
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
+ T L L ++ +A + E + ++G++ S ++I G A +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 298 VVIRMTERGFIPYIRVRQKIIEGL 321
M RG P I +I GL
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGL 644
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 118 ALAVLQRTLRSGCLP---VPQT--HVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGT 172
AL++L+ + GC+P + QT H L ++ L +L EM +G PD T
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL------QLLEEMFLMGCVPDAET 289
Query: 173 CNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL----- 227
N ++ LC D++ EA K++ M G PD +YG ++ +C++ + A+DL
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 228 --------------------------MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAI 261
+ MV YG+ P T L + A+
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 262 EMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
E++ + +G SY ++++G + + A V+ M+ G P
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 155 ANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGA 214
AN+ +M S P T ++ + CAV+++ A+ +L+ M GC+P+S Y +I +
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 215 MCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSV 274
+ + + +EA L+++M + G P T + L I +A +M+ + G++
Sbjct: 262 LSKCNRVNEALQLLEEMFL-MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 275 GFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+Y ++ G + A + R+ + P I + +I G + A AV
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAV 375
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 11/174 (6%)
Query: 163 SIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTS 222
S G PD T N L+ + A++VL M GC P+ SY I++ C++ K
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 223 EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVV 282
EA +++ +M GL P L +A I +A+E+ + ++G ++ +
Sbjct: 442 EAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 283 IEGCLEK----------REYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
I G E R+ + G V +T I R +I E +NE
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 146 DRRLLPLSVANILLEMPSI-GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPD 204
D+ P ++LEM ++ P + N +L L + + A V M P
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPT 216
Query: 205 SNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMI 264
++G+V+ A C V + A L++ M K+G P L +L + +A++++
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 265 EFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASI 324
E + G E++ VI G + A K+V RM RGF P ++ GL I
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 1/171 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G+ D T N LL LC +L EA ++ K + G GC+ D SY +I C +K EA
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
+ +M VK GL P T L L + +AI+ + ++ G +Y V+I+
Sbjct: 560 FMFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
GC + + M + P V +I +A +R+
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A + + L GC+ ++ L S ++ L + L EM G PD T + L+
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM-FLDEMVKRGLKPDNYTYSILI 582
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
L ++++ EA++ G +PD +Y ++I C+ +T E Q+ +M+ K +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NV 641
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P L A + + A+E+ E ++ +G S +Y +I+G A
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASINEW-KIACAVRQ 335
+ M G P + +I+G + + K+ C +R+
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 1/171 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G+ D T N LL LC +L EA ++ K + G GC+ D SY +I C +K EA
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
+ +M VK GL P T L L + +AI+ + ++ G +Y V+I+
Sbjct: 560 FMFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
GC + + M + P V +I +A +R+
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A + + L GC+ ++ L S ++ L + L EM G PD T + L+
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM-FLDEMVKRGLKPDNYTYSILI 582
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
L ++++ EA++ G +PD +Y ++I C+ +T E Q+ +M+ K +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NV 641
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P L A + + A+E+ E ++ +G S +Y +I+G A
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASINEW-KIACAVRQ 335
+ M G P + +I+G + + K+ C +R+
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 97 PQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVAN 156
P + +L L + A VL G +P T+ + ++ R + S
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME-SAKR 247
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L EM G++PD T L+ C + + +EA V+ M P+ +YG++I A+C
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAI--------------- 261
+ +K+ EA+++ +M+ + P + AL + + +A
Sbjct: 308 KEKKSGEARNMFDEMLER-SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 262 ----EMIEFLEKEGYSV-------GFE--------SYEVVIEGCLEKREYVLAGKVVIRM 302
+I +L KEG FE +Y +I G EK E AG++ M
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 303 TERGFIPYIRVRQKIIEGLA 322
ER P +IEGL+
Sbjct: 427 YERKCKPNAFTYNVLIEGLS 446
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 163 SIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTS 222
S G P+ TCN L+ +LC + + A KVL + G +P+ +Y ++G
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 223 EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVV 282
A+ ++++M+ + G P T L +A +++ +EK +Y V+
Sbjct: 244 SAKRVLEEMLDR-GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 283 IEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
I ++++ A + M ER F+P + K+I+ L ++ AC + ++
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 5/234 (2%)
Query: 97 PQLAYSY-ILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA 155
P Y+Y IL P+ALAVL + ++ G P T L + + + + +VA
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++ +M GY P+ T N L+ L ++ +EA+ ++ M GC PD +YG+V+ +
Sbjct: 173 -LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C+ T A +L+ +M + L PG + L + + A+ + + +E +G
Sbjct: 232 CKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKI 329
+Y +I + A +++ M ER P + +I+ A + E K+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID--AFVKEGKL 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N L+ C ++ E ++V + M G + ++ +Y I+I + + AQ++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
K+MV G+ P T L L N + +A+ + E+L++ +Y ++IEG
Sbjct: 454 FKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ + + ++ +G P + +I G
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
N+ EM + G P+ T + L+S LC + ++A ++L M PD ++ +I A
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ K EA+ L +M VK + P T L + + +A +M EF+ +
Sbjct: 337 VKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 276 FESYEVVIEG-CLEKREYVLAGKVVIR-MTERGFIPYIRVRQKIIEGLASINEWKIA 330
+Y +I+G C KR V G V R M++RG + +I+GL + +A
Sbjct: 396 VVTYNTLIKGFCKYKR--VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM P T + L++ C D+L EA ++ + M C PD +Y +I C+ +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ E ++ ++M + GL T L L D A E+ + + +G +Y
Sbjct: 411 RVEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFI-PYIRVRQKIIEGLASINE----WKIAC 331
+++G L K + VV +R + P I +IEG+ + W + C
Sbjct: 470 NTLLDG-LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
IL M G PD T N LL+ LC + + ++ K M GC P+ ++ I++ ++C
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R RK EA L+++M K + P T L N D+ A + +E E Y V
Sbjct: 543 RYRKLDEALGLLEEMKNK-SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME-EAYKVSS 600
Query: 277 E--SYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+Y ++I EK +A K+ M +R P + +++G
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 6/206 (2%)
Query: 121 VLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANI--LLEMPSIGYHPDCGTCNYLLS 178
+L + ++ G LP T+ L R L +V + L+E G PD T N L+
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ---GPKPDVITYNNLIY 294
Query: 179 SLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLT 238
LC + EA L M G PDS +Y +I C+ A+ ++ V G
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN-GFV 353
Query: 239 PGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKV 298
P Q T L L + +A+ + +G Y +I+G + + A ++
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 299 VIRMTERGFIPYIRVRQKIIEGLASI 324
M+E+G IP ++ ++ GL +
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKM 439
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 118 ALAVLQRTLRSGCLPVPQTH-----VLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGT 172
A+ V +R C P ++ VL+ S + D+ + + M G PD +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ------AHKVYMRMRDRGITPDVYS 148
Query: 173 CNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMV 232
+ S C + A+++L M GC + +Y V+G +E +L +M+
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 233 VKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREY 292
G++ T L L D+++ ++++ + K G +Y + I+G ++ E
Sbjct: 209 AS-GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 293 VLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
A ++V + E+G P + +I GL ++++ A
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
+ +L+ R G + T+ L + + L + ++ EM S G PD TCN LL
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN-AAQDLFQEMISHGVCPDTITCNILL 509
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
C ++L EA+++ + + + D+ +Y I+I MC+ K EA DL + + +G+
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGV 568
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T + + I A + ++ G+ +Y +I GCL+ E + +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 298 VVIRMTERGF 307
++ M GF
Sbjct: 629 LISEMRSNGF 638
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N ++ C ++ E +++L+ + G + ++ +Y +I C V + AQDL
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
++M + +G+ P T L N + +A+E+ E ++ + +Y ++I G
Sbjct: 490 FQEM-ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ + A + + G P ++ +I G
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 20/224 (8%)
Query: 129 GCLPVPQTHVLLSSAWLDRRLLPLSVANILLE-MPSIGYHPDCGTCNYLLSSLCAVDQLA 187
GC P T+ L A+L + +S AN L E M S G P+ T + L+ C Q+
Sbjct: 548 GCTPNVVTYTALIHAYLKAK--KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 188 EAVKVLKGMGGAGCIPDSN----------------SYGIVIGAMCRVRKTSEAQDLMKQM 231
+A ++ + M G+ +PD + +YG ++ C+ + EA+ L+ M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 232 VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
++ G P Q L L + +A E+ + + G+ +Y +I+ + +
Sbjct: 666 SME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 292 YVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
LA KV+ +M E P + + ++I+GL + + A + Q
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM G+ T + L+ V + A KVL M C P+ Y +I +C+V
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
KT EA LM QM+ + G P T + I +E++E + +G + + +Y
Sbjct: 759 KTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
V+I+ C + +A ++ M + + + +K+IEG
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 97 PQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLP-VPQTHVLLSSAWLDRRLLPLSVA 155
P++ S + +Y H + A +L++ ++ G +P ++L+ S D+ L +
Sbjct: 372 PKIFNSLVHAYCTSGDHSY--AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 156 NI----LLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
++ EM + G + + LC+ + +A V++ M G G IPD+++Y V
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
+ +C K A L ++M + GL T + + I QA + + + G
Sbjct: 490 LNYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIAC 331
+ +Y +I L+ ++ A ++ M G +P I +I+G + + AC
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 332 AVRQRFAALKS 342
+ +R K
Sbjct: 609 QIFERMCGSKD 619
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
+++ EM G+ PD T + +L+ LC ++ A + + M G + D +Y I++ +
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C+ +A+ +M + G TP T L A + + A E+ E + EG
Sbjct: 529 CKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
+Y +I+G + + A ++ RM +P
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L E P P+ T + L+ C + EA K+L+ M PD+ ++ I+I +
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ + E DL+++M VK G P GT + L + +A EM+ + G F
Sbjct: 284 KKGRVEEGIDLLERMKVK-GCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASIN 325
SY+ ++ G E + V V+ +M GF+P + K+++ + S N
Sbjct: 343 LSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKN 391
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
+ +L+ R G + T+ L + + L + ++ EM S G PD TCN LL
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN-AAQDLFQEMISHGVCPDTITCNILL 509
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
C ++L EA+++ + + + D+ +Y I+I MC+ K EA DL + + +G+
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGV 568
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T + + I A + ++ G+ +Y +I GCL+ E + +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 298 VVIRMTERGF 307
++ M GF
Sbjct: 629 LISEMRSNGF 638
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N ++ C ++ E +++L+ + G + ++ +Y +I C V + AQDL
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
++M + +G+ P T L N + +A+E+ E ++ + +Y ++I G
Sbjct: 490 FQEM-ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ + A + + G P ++ +I G
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 16/186 (8%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLA---------------EAVKVLKGMGGAGCIPD 204
++ +G+ PD T N LL LC D+++ EAV + M G P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 205 SNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMI 264
++ +I +C + EA L+ +MV K GL T + + D + A+ ++
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 265 EFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASI 324
+E+ Y +I+ + + A + M E+G P + +I+G S
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 325 NEWKIA 330
W A
Sbjct: 345 GRWSDA 350
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 136 THVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKG 195
T+ + + + R L L++A +L +M +GY PD T + LL+ C ++++AV ++
Sbjct: 120 TYSIFINCFCRRSQLSLALA-VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 196 MGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANR 255
M G PD+ ++ +I + K SEA L+ QMV + G P T + L
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRG 237
Query: 256 DIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQ 315
DI A+ +++ +EK Y +I+G + + A + M +G P +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 316 KIIEGLASINEWKIA 330
+I L + W A
Sbjct: 298 SLISCLCNYGRWSDA 312
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 117 VALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
+ALAVL + ++ G P T L + + + + +VA ++ +M +GY PD T L
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA-LVDQMVEMGYKPDTFTFTTL 194
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYG 236
+ L ++ +EAV ++ M GC PD +YG V+ +C+ A L+K+M + G
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM--EKG 252
Query: 237 LTPGQGTLVG-LFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLA 295
+ + L + + A+ + ++ +G +Y +I + A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 296 GKVVIRMTERGFIPYIRVRQKIIEGL 321
+++ M ER P + +I+
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAF 338
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM PD T + L++ C D+L EA + + M C P+ +Y +I C+ +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ E +L ++M + GL T L RD A + + + G +Y
Sbjct: 413 RVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFI-PYIRVRQKIIEGLASINE----WKIAC 331
++++G L K + VV +R + P I +IEG+ + W++ C
Sbjct: 472 NILLDG-LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+ +M S+G HP+ T N LL LC +LA+A+ V + + + PD +Y I+I MC
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ K + +L + +K G++P + + +A +++ ++++G
Sbjct: 515 KAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGF 307
+Y +I L + + +++ M GF
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M ++G D T + ++ C QL+ A+ VL M G PD + ++ C +
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ S+A L+ QM V+ G P T L L + +A+ +++ + + G +Y
Sbjct: 168 RISDAVALVDQM-VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
V+ G ++ + LA ++ +M + + + II+GL
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 166 YHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQ 225
+ PD T N L+ + C L A+KV + M PDS SY ++I +C + A+
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 226 DLMKQMVVKYGL------TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
L ++ K L P +F L AN +QA ++ L K G SY
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PSY 467
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
+ +I G + ++ A ++++ M R F+P + + +I+GL I E +A QR
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGM-------GGAGCIPDSNSYG 209
+ EM ++ HPD + + L+ +LC ++ A + + G C P + +Y
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 210 IVIGAMCRVRKTSEAQDLMKQMVVKYGLT--PGQGTLVGLFAALRANRDIRQAIEMIEFL 267
+ +C KT +A+ + +Q++ K G+ P TL+ R + + A E++ +
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLM-KRGVQDPPSYKTLIT--GHCREGK-FKPAYELLVLM 490
Query: 268 EKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
+ + E+YE++I+G L+ E +LA + RM ++P ++ LA
Sbjct: 491 LRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 163 SIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTS 222
+ G PD T N L++ C + EA ++ K M C PD +Y +I +CR K
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 223 EAQDLMKQMVVK-YGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEV 281
A +++ M+ K + P + L ++I +A+ + + G +Y
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 282 VIEGCLEKREY 292
+I+G E Y
Sbjct: 322 LIKGLSEAHRY 332
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++ ++M P T L+ SLC ++ +EA+ ++K M G P+ ++Y ++I ++
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C K +A++L+ QM+ K GL P T L I A++++E +E S
Sbjct: 369 CSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
+Y +I+G + + G V+ +M ER +P + +I+G
Sbjct: 428 TRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDG 471
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
Query: 122 LQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLC 181
+ + + +G P T+ L + R+ L S + EMP G + +L+ LC
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLD-SAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 182 AVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQ 241
++ EA+ + M C P +Y ++I ++C + SEA +L+K+M + G+ P
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNI 358
Query: 242 GTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIR 301
T L +L + +A E++ + ++G +Y +I G ++ A VV
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 302 MTERGFIPYIRVRQKIIEGLASINEWK 328
M R P R ++I+G N K
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHK 445
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G +P+ L+ C ++ EA +L+ M C+P+S ++ +I +C K EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
L+++ +VK GL P T L L + D A + + G +Y I+
Sbjct: 587 T-LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
+ + A ++ +M E G P + +I+G + + A V +R
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 77 QVQIVDEMLQSF--IPLRPRSKPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVP 134
Q + +D + F +PL+ + ++AY++++ + L + A+ + + C P
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI-HGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 135 QTHVLL--SSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKV 192
+T+ +L S +R+ L N++ EM G P+ T L+ SLC+ + +A ++
Sbjct: 324 RTYTVLIKSLCGSERKSEAL---NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 193 LKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALR 252
L M G +P+ +Y +I C+ +A D+++ M + L+P T L
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KLSPNTRTYNELIKGY- 438
Query: 253 ANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIR 312
++ +A+ ++ + + +Y +I+G + A +++ M +RG +P
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 313 VRQKIIEGLASINEWKIACAV 333
+I+ L + AC +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDL 519
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 96 KPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA 155
+P ++ IL + L F A + Q+ L SG P T+ + L L
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL-LDAE 657
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
+++ +M G PD T + L+ + Q A VLK M GC P +++ +I +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 216 CRVR----KTSEAQ--------------DLMKQMVVKYGLTPGQGTLVGLFAALRANRDI 257
++ K SE + +L+++M V++ +TP + L + ++
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM-VEHSVTPNAKSYEKLILGICEVGNL 776
Query: 258 RQAIEMIEFLEK-EGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQK 316
R A ++ + +++ EG S + ++ C + +++ A KVV M G +P + +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 317 IIEGLASINEWKIACAVRQRF 337
+I GL E + +V Q
Sbjct: 837 LICGLYKKGEKERGTSVFQNL 857
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Query: 81 VDE--MLQSFIPLRPRSKPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGC-LPVPQTH 137
+DE M+ +P + + + Y I + L + AL V+Q SG L V
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYG-IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 138 VLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMG 197
++ +RL S N++ EM G + CN L+ L +L EA L+ MG
Sbjct: 434 SIIDCLCKKKRLEEAS--NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 198 GAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDI 257
GC P SY I+I +C+ K EA +K+M ++ G P T L L +R I
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-LENGWKPDLKTYSILLCGLCRDRKI 550
Query: 258 RQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKI 317
A+E+ + G + ++I G + A V+ M R + +
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 318 IEGLASINE 326
+EG + +
Sbjct: 611 MEGFFKVGD 619
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
MP+ GY D T + LC + +A+ V++ + +G D +Y +I +C+ ++
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 221 TSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYE 280
EA +L+K+M K+G+ L L + + +A + + K G SY
Sbjct: 445 LEEASNLVKEM-SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 281 VVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQRF 337
++I G + ++ A V M E G+ P ++ ++ GL + +A + +F
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++LL M GY PD + + +++ C +L + K+++ M G P+S YG +IG +
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
CR+ K +EA++ +M ++ G+ P L DIR A + + +
Sbjct: 327 CRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
+Y +I G + + V AGK+ M +G P ++I G K A V
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 336 R 336
Sbjct: 446 H 446
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
IL EM G P T N L++ C L + K+L M G P++ ++ ++ C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
A + K M + G+ P T L R++++A + + ++ +G+SV
Sbjct: 608 IRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERG 306
+Y V+I+G L++++++ A +V +M G
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A V +++GC P T+ L L S +L EM IG P+ T N ++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD-SANELLHEMWKIGLQPNIFTYNSIV 498
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ LC + EAVK++ AG D+ +Y ++ A C+ + +AQ+++K+M+ K GL
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GL 557
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T L + + +++ ++ +G + ++ +++ + A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 298 VVIRMTERGFIPYIRVRQKIIEG 320
+ M RG P + + +++G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKG 640
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
+ + EM G PD T L++ C + +A +V M AGC P+ +Y +
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I +C+ A +L+ +M K GL P T + L + +I +A++++ E G
Sbjct: 463 IDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ +Y +++ + E A +++ M +G P I ++ G
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A +R G LP + L + R + + + EM S PD T ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR-AASKFFYEMHSRDITPDVLTYTAII 393
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
S C + + EA K+ M G PDS ++ +I C+ +A + M ++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGC 452
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG 285
+P T L L D+ A E++ + K G +Y ++ G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 118 ALAVLQRTLRSG-CLPVPQTHVLLSSAWLDRRLLPLSVANILL-EMPSIGYHPDCGTCNY 175
A V ++ L G L V +V L+ L + + A I+ E P +G + + N
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTR--LSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 176 LLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKY 235
++ +C + ++ EA +L M G PD SY V+ CR + + L++ M K
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK- 310
Query: 236 GLTPGQ---GTLVGLFAALRANRDIRQAI-EMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
GL P G+++GL + + +A EMI ++G Y +I+G ++ +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI----RQGILPDTVVYTTLIDGFCKRGD 366
Query: 292 YVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
A K M R P + II G I +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++LL M GY PD + + +++ C +L + K+++ M G P+S YG +IG +
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
CR+ K +EA++ +M ++ G+ P L DIR A + + +
Sbjct: 327 CRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
+Y +I G + + V AGK+ M +G P ++I G K A V
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 336 R 336
Sbjct: 446 H 446
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
IL EM G P T N L++ C L + K+L M G P++ ++ ++ C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
A + K M + G+ P T L R++++A + + ++ +G+SV
Sbjct: 608 IRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERG 306
+Y V+I+G L++++++ A +V +M G
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A V +++GC P T+ L L S +L EM IG P+ T N ++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD-SANELLHEMWKIGLQPNIFTYNSIV 498
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ LC + EAVK++ AG D+ +Y ++ A C+ + +AQ+++K+M+ K GL
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GL 557
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T L + + +++ ++ +G + ++ +++ + A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 298 VVIRMTERGFIPYIRVRQKIIEG 320
+ M RG P + + +++G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKG 640
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
+ + EM G PD T L++ C + +A +V M AGC P+ +Y +
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I +C+ A +L+ +M K GL P T + L + +I +A++++ E G
Sbjct: 463 IDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ +Y +++ + E A +++ M +G P I ++ G
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A +R G LP + L + R + + + EM S PD T ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR-AASKFFYEMHSRDITPDVLTYTAII 393
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
S C + + EA K+ M G PDS ++ +I C+ +A + M ++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGC 452
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG 285
+P T L L D+ A E++ + K G +Y ++ G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 118 ALAVLQRTLRSG-CLPVPQTHVLLSSAWLDRRLLPLSVANILL-EMPSIGYHPDCGTCNY 175
A V ++ L G L V +V L+ L + + A I+ E P +G + + N
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTR--LSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 176 LLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKY 235
++ +C + ++ EA +L M G PD SY V+ CR + + L++ M K
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK- 310
Query: 236 GLTPGQ---GTLVGLFAALRANRDIRQAI-EMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
GL P G+++GL + + +A EMI ++G Y +I+G ++ +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI----RQGILPDTVVYTTLIDGFCKRGD 366
Query: 292 YVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
A K M R P + II G I +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 5/259 (1%)
Query: 74 QTLQVQIVDEMLQSFIPL-RPRSKPQLA-YSYILSYTLQSSHPFPVALAVLQRTLRSGCL 131
+ LQ +D+ + F + + R P + +S +LS + + F + +++ ++ G
Sbjct: 49 KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLS-AIAKMNKFDLVISLGEQMQNLGIS 107
Query: 132 PVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVK 191
T+ + + + R L L++A IL +M +GY P T N LL+ C ++++EAV
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALA-ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 192 VLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAAL 251
++ M G PD+ ++ ++ + + K SEA L+++MVVK G P T + L
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGL 225
Query: 252 RANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
+ A+ ++ +EK Y +I+G + + A + +M +G P +
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 312 RVRQKIIEGLASINEWKIA 330
+I L + W A
Sbjct: 286 FTYNPLISCLCNYGRWSDA 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++ +M + G PD T N L+S LC + ++A ++L M PD + +I A
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ K EA+ L +MV P L + + + +E+ + + G
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+Y +I G + R+ A V +M G P I +++GL + + A V
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++L +M G+ P+ L+ +LC VD++ EA+KV M C D +Y ++
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C+ K + ++ M+ K GL P + T + + A + +E++E + + Y
Sbjct: 368 CKWGKIDKCYIVLDDMIKK-GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLAS 323
Y VVI + E A ++ M E G P + +I GLAS
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLAS 474
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 121 VLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSL 180
VL ++ G +P T++ + A + ++ +M I YHPD G N ++
Sbjct: 379 VLDDMIKKGLMPSELTYMHIMVAHEKKESFE-ECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 181 CAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPG 240
C + ++ EAV++ M G P +++ I+I + EA D K+MV + +
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVS 497
Query: 241 Q-GTLVGLFAALRANRDIRQAIEMIEFLEKEGY-SVGFESYEVVIEGCLEKREYVLAGKV 298
Q GTL L + ++ + A ++ + +G + S+ + I K A
Sbjct: 498 QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSY 557
Query: 299 VIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQR 336
I M E F+P K+++GL + + A + ++
Sbjct: 558 CIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEK 595
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 99 LAYSYILSYTLQSSHPFPVALAVLQRTLRSGC-LPVPQTHVLLSSAWLDRRLLPLSVANI 157
+A++ ILS +L VA + ++ GC L +V + SA ++ P V +
Sbjct: 210 IAFTTILS-SLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSA---QKESPERVKEL 265
Query: 158 LLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCR 217
+ EM S+G PD + NYL+++ C L EA KV +G+ G C P++ ++ +I +C
Sbjct: 266 IEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCY 325
Query: 218 VRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
R + + K+ V + + P TL L L N+ A +I ++K+
Sbjct: 326 SRLYEQGYAIFKKSVYMHKI-PDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM G P+ T L++ LC +++ +A+++ M G D +YG +I C+
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
A L +++ + GL P Q L + R ++ A+++ + + K+G +Y
Sbjct: 669 NMESASALFSELL-EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
+I+G L+ +LA ++ M G +P + I+ GL+
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G + D +C+ LL +L + EA+K+ + + G + D+ + ++I +C++ K +EA
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
++++ + + + P T L ++++A + E++E++G E Y +I
Sbjct: 526 KEILDNVNI-FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASI 324
G + R +VI + RG P + +I G +I
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Query: 136 THVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKG 195
T+ + + + R L L++A +L +M +GY PD T + LL+ C ++++AV ++
Sbjct: 120 TYSIFINCFCRRSQLSLALA-VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 196 MGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANR 255
M G PD+ ++ +I + K SEA L+ QMV + G P T + L
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRG 237
Query: 256 DIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQ 315
DI A+ ++ +E + +I+ + R +A + M +G P +
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 316 KIIEGLASINEWKIA 330
+I L + W A
Sbjct: 298 SLINCLCNYGRWSDA 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M ++G D T + ++ C QL+ A+ VL M G PD + ++ C +
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ S+A L+ QM V+ G P T L L + +A+ +++ + + G +Y
Sbjct: 168 RISDAVALVDQM-VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
V+ G ++ + LA ++ +M + + II+ L ++A
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 149 LLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSY 208
+L +V N EM P+ T L+ L + ++A K+ M G G P+ +Y
Sbjct: 180 MLAFAVYN---EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 209 GIVIGAMCRVRKTSEAQDLMKQMVV--KYGLTPGQGTLVGLFAALRANRDIRQAIEMIEF 266
I+I +C+ +A+ L +M Y + L+ F L + +A E++
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR---MVEAFELLRL 293
Query: 267 LEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
EK+G+ +G Y +I+G R Y A ++ M ++ P I + +I+GL+
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
AL +++ S C P + +L + L +V + LEM G D N L+
Sbjct: 291 ALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV-DTFLEMERSGMKADVAVFNSLI 349
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ C +++ +VLK M G P+S S I++ + + EA D+ ++M+
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI--KVC 407
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T + +++ A ++ +++ K+G ++ V+I G E+R A
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 298 VVIRMTERGFIP----YIRVRQKIIE 319
++ M E G P + R+RQ +I+
Sbjct: 468 LLEEMIEMGIRPSGVTFGRLRQLLIK 493
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 50/298 (16%)
Query: 77 QVQIVDEMLQSFIPLRPRSKPQ--LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVP 134
+ Q VDE + +F + P +A++ +LS L S A V + +R P
Sbjct: 180 RAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLS-ALCKSKNVRKAQEVFE-NMRDRFTPDS 237
Query: 135 QTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLK 194
+T+ +L W LP + EM G HPD T + ++ LC ++ EA+ +++
Sbjct: 238 KTYSILLEGWGKEPNLP-KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 195 GMGGAGCIPDS-------NSYGI----------------------------VIGAMCRVR 219
M + C P + ++YG +IGA C+
Sbjct: 297 SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKAN 356
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIE----MIEFLEKEGYSVG 275
+ ++K+M K G+TP + + L + +A + MI+ E +
Sbjct: 357 RMKNVYRVLKEMKSK-GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDA---- 411
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
++Y +VI+ EK+E A KV M ++G P + +I GL + AC +
Sbjct: 412 -DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 468
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 148 RLLPLSVAN-ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSN 206
R + L+ AN ++ +M S G +P+ T N L+ C V +L +A+ + + + G P
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 207 SYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEF 266
+Y I++ CR TS A ++K+M + G+ P + T L + ++ +AI++
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 267 LEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
+E+ G +Y V+I G K + A ++ M E+ P + +I G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M G P+ T N +++ LC + +A +V M G + +Y +IG +CR
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
K +EA ++ QM G+ P T L + +A+ + L+ G S +Y
Sbjct: 318 KLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVR 334
+++ G K + A K+V M ERG P +I+ A + + A +R
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWL--DRRLLPLSVANILLEMPSIGYHPDCGTCNY 175
A + + + G +P +++ LL A+ D + + +LE + PD +
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV---PDVDSYKI 230
Query: 176 LLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKY 235
L+ C Q+ A+++L M G +PD SY ++ ++CR + EA L+ +M +K
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLK- 289
Query: 236 GLTPG---QGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREY 292
G P T++ F R +R + A ++++ + G S SY +I G ++ +
Sbjct: 290 GCNPDLVHYNTMILGFC--REDRAM-DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 293 VLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
K + M +GF P+ V +++G S + + AC V
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A+ +L L G +P ++ L ++ L R+ +L M G +PD N ++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNS-LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
C D+ +A KVL M GC P+S SY +IG +C E + +++M+ K G
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK-GF 361
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI 283
+P L + + +A +++E + K G ++ +++E+VI
Sbjct: 362 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Query: 164 IGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSE 223
IG+ P + NYL+ +LCA + + +A VLKG G ++ + A+C K
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDM 480
Query: 224 AQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI 283
A++L+ + L P + + +AL + A+ + E K G F+ + +I
Sbjct: 481 ARELVIA-AAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539
Query: 284 EGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIE 319
G + +A K++IRM E+G+ P + + +I+
Sbjct: 540 YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQ 575
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 92 RPRSK---PQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRR 148
R RSK P I+ +L S +AL VL + L C P T+ +L A +
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 149 LLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSY 208
+ ++ ++ EM S G PD T N ++ +C + A ++++ + GC PD SY
Sbjct: 243 GVDEALK-LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 209 GIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLE 268
I++ A+ K E + LM +M + P T L L + I +A+ +++ ++
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 269 KEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
++G + SY+ +I + +A + + M G +P I
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++ +M S P+ T + L+++LC ++ EA+ +LK M G PD+ SY +I A C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R + A + ++ M+ G P + A L N QA+E+ L + G S
Sbjct: 380 REGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
SY + + + A +++ M G P
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
N+L M G PD + + L+++ C +L A++ L+ M GC+PD +Y V+ +
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMI 264
C+ K +A ++ ++ + G +P + +F+AL ++ D +A+ MI
Sbjct: 414 CKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 93/211 (44%), Gaps = 3/211 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
+L +L+ +R G P L + R +P +V ++E+ PD N L+
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVR--VMEILEKFGQPDVFAYNALI 165
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ C ++++ +A +VL M PD+ +Y I+IG++C K A ++ Q++
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NC 224
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T L A + +A+++++ + G +Y +I G ++ A +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASINEWK 328
+V + +G P + ++ L + +W+
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWE 315
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 152 LSVANILLE-MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGI 210
LS AN +L+ M PD T L+ C V ++ + +KV + + G + ++ +Y I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 211 VIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
++ C+ K A++L ++M V +G+ P T L L N + +A+E+ E L+K
Sbjct: 409 LVQGFCQSGKIKLAEELFQEM-VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 271 GYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL---ASINEW 327
+G Y +IEG + + A + + +G P + +I GL S++E
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 328 KI 329
I
Sbjct: 528 NI 529
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L ++ +GY PD T N L+ L +++EAV ++ M GC PD +Y ++ +C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R TS A DL+++M + + T + +L + I AI + + +E +G
Sbjct: 205 RSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
+Y ++ G + ++ ++ M R +P +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L EM PD TCN L+++ C ++ + AVKV K M +G D SY +I C
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
+V + A++ + M+ K G +PG T L + +++E EK G
Sbjct: 424 KVLELENAKEELFSMIEK-GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRG 477
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M S G+ P T N +L LC ++ EA ++L M G PD+ + +I A C++
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 221 TSEAQDLMKQMV---VKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFE 277
A + K+M+ +K + + + G L + MIE +G+S G+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIE----KGFSPGYA 448
Query: 278 SYEVVIEGCLEKREYVLAGKVVIRMTERGF 307
+Y +++G + + K++ +RG
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 2/208 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A+ VL+ GC P T+ L + R L VA+++ + S G + T N LL
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE-EVASVIQHILSHGLELNTVTYNTLL 321
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
SLC+ + E ++L M P +Y I+I +C+ R S A D QM+ + L
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T + A+ + AIE++ L+ G +Y VI+G +K A +
Sbjct: 382 -PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASIN 325
+ +M + G P R+ +I G N
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRAN 468
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 136 THVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKG 195
T+ ++ + R L ++A IL +M +GY P T N LL+ C ++++EAV ++
Sbjct: 102 TYNIMINCLCRRSQLSFALA-ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 196 MGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANR 255
M G PD+ ++ ++ + + K SEA L+++MVVK G P T + L
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRG 219
Query: 256 DIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQ 315
+ A+ ++ +EK Y VI+ + R A + M +G P +
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 316 KIIEGLASINEWKIA 330
+I L + W A
Sbjct: 280 SLISCLCNYGRWSDA 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 5/178 (2%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM P+ T N L++ C D+L EA ++ M C+PD +Y +I C+ +
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
K + +L + M + GL T L D A + + + +G +Y
Sbjct: 395 KVVDGMELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----WKIACAV 333
+++G + + A V + + P I + EG+ + W + C++
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 117 VALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
+AL++L + L+ G P T L + + R + +V+ ++ +M IGY PD N +
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS-LVDKMVEIGYKPDIVAYNAI 196
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYG 236
+ SLC ++ +A K + G P+ +Y ++ +C + S+A L+ M +K
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKK 255
Query: 237 LTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG-CLEKR 290
+TP T L A N + +A E+ E + + +Y +I G CL R
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 6/246 (2%)
Query: 92 RPRSKPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLP 151
R +P + L L +S + A +L ++ P T+ L A++ +
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV- 276
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
L + EM + PD T + L++ LC D++ EA ++ M GC+ D SY +
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I C+ ++ + L ++M + GL T L D+ +A E ++ G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----W 327
S +Y +++ G + E A + M +R I +I G+ + W
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 328 KIACAV 333
+ C++
Sbjct: 456 SLFCSL 461
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
+IL +M +GY PD T L++ C +++++AV ++ M G PD +Y +I ++
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C+ ++ ++A D K+ + + G+ P T L L + A ++ + K+ +
Sbjct: 201 CKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+Y +++ ++ + + A ++ M P I +I GL
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M +G D T N +++ C Q++ A+ +L M G PD + G ++ CR
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ S+A L+ +M V+ G P + +L + + A + + +E++G +Y
Sbjct: 170 RVSDAVSLVDKM-VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
++ G + A +++ M ++ P +
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 4/196 (2%)
Query: 138 VLLSSAWLDRRLLP---LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLK 194
V++S+A +DR ++ N+ EM G P+ T N ++ S C + ++A ++L+
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 195 GMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRAN 254
M PD ++ +I A + RK SEA+++ K+M +++ + P T +
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM-LRWSIFPTTITYNSMIDGFCKQ 128
Query: 255 RDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVR 314
+ A M++ + +G S ++ +I G + + ++ M RG +
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 315 QKIIEGLASINEWKIA 330
+I G + + A
Sbjct: 189 TTLIHGFCQVGDLDAA 204
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L M S G PD T + L++ C ++ +++ M G + ++ +Y +I C
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEK 269
+V AQDL+ +M + G+ P T + A L + +++R+A ++E L+K
Sbjct: 197 QVGDLDAAQDLLNEM-ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
L +L EM S+ PD T L++ LC DQ+AEA ++ + M P S +Y +
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I C+ +A DL +M G+ P T L RDI+ A+ + + +G
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTAS-GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWK 328
+Y +I+ ++ A ++ M E G P +++G WK
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF-----WK 526
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 3/183 (1%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
++ ++ + M G P+ N L+ C + EAV +L M PD +Y I+
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I +C + +EA L ++M + + P T L ++ QA+++ + G
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIAC 331
++ +I+G R+ A + MT +G +P + +I+ A E +
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID--AHFKEANMKE 497
Query: 332 AVR 334
A+R
Sbjct: 498 ALR 500
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM G P+ T N L+ S C+ +VK+ M G PD +Y I + C++R
Sbjct: 520 EMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMR 579
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
K +A++L+K M ++ GL P T L AL + +A EM +E+ G
Sbjct: 580 KVKKAEELLKTM-LRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 153 SVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVI 212
+ A L EM G P+ T N LS + + VL+ + G PD ++ ++I
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 213 GAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGY 272
+CR ++ +A D K+M +++G+ P + T L + + D +++++ +++ G
Sbjct: 503 NCLCRAKEIKDAFDCFKEM-LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Query: 273 SVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
S +Y I+ + R+ A +++ M G P +I+ L+
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALS 611
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M S G PD T N L++ C ++ + +K+ M G + D+ +Y +I C+ K
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 221 TSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYE 280
+ AQ + +MV G++P T L L N I +A+ M+E L+K V +Y
Sbjct: 375 LNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 281 VVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
++I+G + A + +T +G P +I GL
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 36/160 (22%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M +G+ P T LL+ C ++ EAV ++ M G G +P+ Y VI +C+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK-- 196
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
NRD+ A+E+ +EK+G +Y
Sbjct: 197 ----------------------------------NRDLNNALEVFYCMEKKGIRADAVTY 222
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIE 319
+I G + A +++ M +R P + +I+
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G PD N L+ CA+ + A +LK M PD +Y ++ +C K EA
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
++LM +M + G+ P + L + D + A + + + G++ +Y +++
Sbjct: 522 RELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWK 328
G + +E LA +++ M G +P +IE +++++ K
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKK 624
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
I+ EM S G+ PD T N +LS +C A +VL+ M G +PDS SY I+I C
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRG-C 337
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
E + +VK G+ P T L L I A +I + ++G +
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 277 ESYEVVIEG 285
+Y ++I G
Sbjct: 398 VTYNILING 406
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM + G PD T N L+ C + L EA ++ M GC PD +Y I+I + C+ +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ + L +++ K GL P T L + + A E+ + + G +Y
Sbjct: 400 RVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----WKIACAVRQ 335
++++G + E A ++ +M + I + II G+ + ++ W + C++
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 336 R 336
+
Sbjct: 519 K 519
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A +VL R + G P T L + + + +VA ++ M + PD T + L+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA-LVDRMVEMKQRPDLVTVSTLI 182
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQM------ 231
+ LC +++EA+ ++ M G PD +YG V+ +C+ ++ A DL ++M
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 232 --VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEK 289
VV+Y + + +L + A+ + +E +G +Y +I G
Sbjct: 243 ASVVQYSI---------VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 290 REYVLAGKVVIRMTERGFIPYIRVRQKIIE 319
++ K++ M R IP + +I+
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALID 323
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 151 PLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGI 210
P S L+ M S G P T + L +LC D+ +K + + G + SY +
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSL 402
Query: 211 VIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
+I +C+ + E+ +++M K GL P L A IR A ++ + + E
Sbjct: 403 MISFLCKAGRVRESYTALQEM-KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 271 GYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
G + +Y V+I E+ E + ++ +M ERG P + +IEGL E KI
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC--KETKIE 519
Query: 331 CAV 333
A+
Sbjct: 520 AAM 522
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 99 LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANIL 158
+ Y+ I+S +L + F AL V R RSGC P + L L +
Sbjct: 295 ITYTTIMS-SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 159 LEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAG-CIPDSNSYGIVIGAMCR 217
+EMP +G + T N +++ C D+ +A+++LK M + C PD ++Y ++ + +
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 218 VRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAAL-RAN 254
E L+K+MV K+ L+ + T L L RAN
Sbjct: 414 RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
+ V +L EM + G P+ T ++SSL A + EA++V M +GC PDS Y +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I + R + EA+ + + + + G++ T + A + + +AIE+++ +E
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 272 Y-SVGFESYEVVIEGCLEKREYVLAGKVVIRM 302
+ +Y+ ++ C ++ + V GK++ M
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 99 LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANIL 158
+ Y+ I+S +L + F AL V R RSGC P + L L +
Sbjct: 295 ITYTTIMS-SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 159 LEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAG-CIPDSNSYGIVIGAMCR 217
+EMP +G + T N +++ C D+ +A+++LK M + C PD ++Y ++ + +
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 218 VRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAAL-RAN 254
E L+K+MV K+ L+ + T L L RAN
Sbjct: 414 RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
+ V +L EM + G P+ T ++SSL A + EA++V M +GC PDS Y +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
I + R + EA+ + + + + G++ T + A + + +AIE+++ +E
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 272 Y-SVGFESYEVVIEGCLEKREYVLAGKVVIRM 302
+ +Y+ ++ C ++ + V GK++ M
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 126 LRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQ 185
+++GC P T+ + R+ + + + EM G H + + L+ L +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVD-AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 186 LAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLV 245
+ EA+ +L M C P+ +Y ++I A+C + SEA +L KQM + G+ P
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM-SESGIKPDDCMYT 299
Query: 246 GLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTER 305
L + + + +A ++E + + G +Y +I+G +K + G ++ +M E+
Sbjct: 300 VLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMG-LLSKMLEQ 358
Query: 306 GFIPYIRVRQKIIEGLAS 323
+P + +I G S
Sbjct: 359 NLVPDLITYNTLIAGQCS 376
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A V + ++GC ++ L + + + +++ +L++M P+ T L+
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS-LLVKMKDDNCCPNVRTYTVLI 267
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+LC Q +EA+ + K M +G PD Y ++I + C EA L++ M ++ GL
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM-LENGL 326
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
P T L +++ +A+ ++ + ++ +Y +I G A +
Sbjct: 327 MPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYR 385
Query: 298 VVIRMTERGFIPYIRV 313
++ M E G +P R
Sbjct: 386 LLSLMEESGLVPNQRT 401
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N L C V +A+K+L+ M AG P++ +Y I C+ EA DL
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 228 MKQMVVKYGL--TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG 285
M+ K P T + AL N + E+I + G +Y+ VIEG
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEG 385
Query: 286 CLEKREYVLAGKVVIRMTERGFIPYI 311
+ A K + M+ +G+ P I
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDI 411
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 5/230 (2%)
Query: 101 YSY-ILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILL 159
YSY IL P+ALAVL + ++ G P T L + + + + +VA ++
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA-LVD 174
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M + Y P+ T N L+ L ++ +EAV ++ M GC PD +YG V+ +C+
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
A L+K+M K + + AL +++ A+ + ++ +G +Y
Sbjct: 235 DIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKI 329
+I + A +++ M ER P + +I+ A + E K+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID--AFVKEGKL 341
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM PD T + L++ C D+L EA + + M C P+ +Y +I C+ +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 220 KTSEAQDLMKQMVVK--YGLTPGQGTLV-GLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ E +L ++M + G T TL+ GLF A D A ++ + + +G
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA----GDCDMAQKIFKKMVSDGVPPDI 465
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----WKIACA 332
+Y ++++G + + A V + + P I +IEG+ + W + C+
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 333 V 333
+
Sbjct: 526 L 526
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 3/200 (1%)
Query: 124 RTLRSGCL-PVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCA 182
RT+ G + P T+ L + R L V ++L EM S G PD + N LL +
Sbjct: 271 RTMNDGGIVPDLTTYSHLVETFGKLRRLE-KVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 183 VDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQG 242
+ EA+ V M AGC P++N+Y +++ + + + + L +M P
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAA 388
Query: 243 TLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRM 302
T L ++ + + + +E E+YE +I C + + A K++ M
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 303 TERGFIPYIRVRQKIIEGLA 322
T +P + +IE
Sbjct: 449 TANDIVPSSKAYTGVIEAFG 468
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M +G+ PD T N L++ LC + AEA+ ++ M GC P++ +YG V+ MC+ +
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 221 TSEAQDLMKQM--------VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGY 272
T+ A +L+++M VKY + + L + + A + +E +G
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSI---------IIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 273 SVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
+ +Y ++I G + K++ M +R P +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 152 LSVANILLE-MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGI 210
L AN +++ M S G P+ T N L++ C +++ + +++ + M G + D+ +Y
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 211 VIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
+I C + K + A++L ++MV + + P T L L N + +A+E+ E +EK
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 271 GYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ Y ++I G + A + + +G P ++ +I GL
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
N+ EM G + T N L+ C + + K+L+ M P+ ++ ++I +
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ K EA++L K+M+ + G+ P T L + +A +M++ + +G
Sbjct: 344 VKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
++ ++I G + ++ +M+ RG + +I+G + + +A + Q
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 336 RFAALK 341
+ K
Sbjct: 463 EMVSRK 468
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 164 IGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSE 223
+GY P+ T + L++ LC +++EA++++ M G PD + ++ +C K +E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 224 AQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI 283
A L+ +M V+YG P T + + + A+E++ +E+ + Y ++I
Sbjct: 212 AMLLIDKM-VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 284 EGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEW 327
+G + A + M +G I +I G + W
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 169 DCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLM 228
D G N ++ +C ++ +A + + G P +Y I+IG +C+ SEA+ L
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 229 KQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
++M + G P T L A + D +++++IE L++ G+SV + ++VI+
Sbjct: 567 RKM-EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM P+ T + L++ C +D+L EA ++L+ M C+P+ +Y +I C+ +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ + +L ++M + GL T L RD A + + + G +Y
Sbjct: 408 RVDKGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFI-PYIRVRQKIIEGLASINEWKIA 330
++++G L K + VV +R + P I +IEG+ +WK+
Sbjct: 467 NILLDG-LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M G D T L++ L D++ +A ++ + M G G PD SYG++I ++
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 221 TSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYE 280
+A + +M V+ GLTP L + +I +A E+++ + +G +Y
Sbjct: 643 MQKASSIFDEM-VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 281 VVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
+I+G + + A ++ M +G +P V +++G +N+
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N L++ C D+L +A ++ + M C PD ++Y +I C+ ++ + +L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
++M + GL T L L + D A ++ + + +G +Y ++++G
Sbjct: 348 FREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----WKIACAV 333
+ A +V M + I + +IEG+ + W + C++
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
N+ EM + G P+ T + L+S LC+ + ++A ++L M P+ ++ +I A
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ K EA+ L M+ K + P T L + + +A +M EF+ +
Sbjct: 266 VKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 276 FESYEVVIEG-CLEKREYVLAGKVVIR-MTERGFIPYIRVRQKIIEGL 321
++Y +I+G C KR V G + R M+ RG + +I+GL
Sbjct: 325 LDTYNTLIKGFCKSKR--VEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 117 VALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
+ALA+L + ++ G P T L + + + + +VA ++ +M +GY PD T L
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQMVEMGYRPDTITFTTL 121
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIG----------------------- 213
+ L ++ +EAV ++ M GC P+ +YG+V+
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 214 ------------AMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAI 261
++C+ R +A +L K+M K G+ P T L + L + A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 262 EMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+++ + ++ + ++ +I+ +++ ++V A K+ M +R P I +I G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
IL E+ G P+ T N LL +L +++ EA+ + M C P+ +YGI+I +C
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+VRK ++A ++M K G+ P + + + L +I +A + + + G
Sbjct: 739 KVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 277 ESYEVVIEG 285
Y +IEG
Sbjct: 798 ACYNAMIEG 806
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 3/179 (1%)
Query: 156 NILLEM-PSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGA 214
+ LEM S G D N L+ +L + + A +V + PD+ ++ I+I
Sbjct: 224 DAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHG 282
Query: 215 MCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSV 274
C+ RK +A+ +M M V TP T A D R+ EM+E + + G +
Sbjct: 283 FCKARKFDDARAMMDLMKVT-EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 275 GFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+Y +V+ + ++ A V +M E G +P + +I L+ +K A +
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEI 400
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 108 TLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA--NILLEMPSIG 165
TL S P A L R R+G + +++ + DR L ++V N +L+ SI
Sbjct: 1024 TLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLS--DRGNLDIAVHLLNTMLKNQSI- 1080
Query: 166 YHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQ 225
P + + +++ L +QL +A+ M G P +++ ++ C + E++
Sbjct: 1081 --PGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESE 1138
Query: 226 DLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG 285
L+K MV G +P Q + R ++ +A EM+E ++K GY V FE++ +I
Sbjct: 1139 RLIKSMV-GLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISN 1197
Query: 286 CLEKRE 291
+E
Sbjct: 1198 MSSSKE 1203
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
L + +L EM S G P+ T N L+ + EA+K+ M G P SYG++
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
+ +C+ + A+ +M + G+ G+ T G+ L N + +A+ ++ + K+G
Sbjct: 415 LDGLCKNAEFDLARGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
+Y +I G + + A ++V R+ G P
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%)
Query: 169 DCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLM 228
D T N L+ LC V + +A+++L M G GC PD +Y +I C+ + ++A ++
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 229 KQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLE 288
K + +P T + + +R+A +++ + + G ++ V+++G +
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 289 KREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
E + A ++ +M G P + +I+G + +
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A ++L LR G P T +L + + L+ I +M S G PD T L+
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM-LTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVK 234
C V Q+++ ++ + M G P++ +Y I+I A+C + +A++L+ Q+ K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%)
Query: 169 DCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLM 228
D T N L+ LC V + +A+++L M G GC PD +Y +I C+ + ++A ++
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 229 KQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLE 288
K + +P T + + +R+A +++ + + G ++ V+++G +
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 289 KREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
E + A ++ +M G P + +I+G + +
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A ++L LR G P T +L + + L+ I +M S G PD T L+
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM-LTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVK 234
C V Q+++ ++ + M G P++ +Y I+I A+C + +A++L+ Q+ K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 112 SHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEM-PSIGYHPDC 170
S F A ++ + GC+P + L +A L L ++A LL+M + G PD
Sbjct: 238 SGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDA 297
Query: 171 GTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQ 230
T N LLS+ L AVKV + M C PD +Y +I R +EA+ L +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 231 MVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI 283
+ +K G P T L A R+ + E+ + ++K G+ +Y +I
Sbjct: 358 LELK-GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM + + N +L A++ + V+V + + G PD +Y +I CR R
Sbjct: 917 EMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ E LM+QM GL P T L +A + + QA ++ E L +G + Y
Sbjct: 977 RPEEGYLLMQQM-RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFY 1035
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
+++ + A K++ M G P +
Sbjct: 1036 HTMMKISRDSGSDSKAEKLLQMMKNAGIEPTL 1067
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM ++G PD + + + C + A KVL M +P+ ++ +I +C+
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
K +A L+ +M+ K G P T + A + ++ +A +++ +++ +Y
Sbjct: 328 KVDDAYLLLDEMIQK-GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 386
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+V++ + + A ++ M+ER F P + +I GL
Sbjct: 387 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL 428
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M +G + TCN LL+ C QL+ A+ L M G P ++G ++ CR
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ +A + QM V G P + L ++ + A++++ +EK+G +Y
Sbjct: 166 RVYDALYMFDQM-VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
+I G + A ++V MT+R P + +I+ A + E +++
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID--ACVKEGRVS 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++L M G PD T N L+S LC+ + ++A +++ M PD ++ +I A
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ + SEA++ ++M+ + L P T L L + +A EM F+ +G
Sbjct: 267 VKEGRVSEAEEFYEEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
+Y ++I G + ++ K+ M++RG + +I+G + +A + +
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 336 R 336
R
Sbjct: 386 R 386
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 148 RLLPLSVA-NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSN 206
R LS+A + L +M +G+ P T LL+ C D++ +A+ + M G G P+
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 207 SYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEF 266
Y +I +C+ ++ A DL+ +M K G+ P T L + L ++ A M+
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 267 LEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
+ K ++ +I+ C+++ A + M R P I +I GL
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM PD T + L+ LC +L EA ++ M GC PD +Y I+I C+ +
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 220 KTSEAQDLMKQM--------VVKY--------------------------GLTPGQGTLV 245
K L +M V Y G+ P T
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 246 GLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTER 305
L L N I +A+ ++ ++K G +Y ++I G + E A + + +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 306 GFIPYIRVRQKIIEGL 321
G +P I ++ GL
Sbjct: 461 GLMPDIWTYTTMMLGL 476
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 163 SIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTS 222
+ G+ PDC N ++ C + + +EAV V K M G PD +Y +I + + +
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 223 EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVV 282
EA+ +K M V G P T L + + A+ ++E +E G + +Y +
Sbjct: 318 EARMYLKTM-VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Query: 283 IEGCLEKR 290
+ G + R
Sbjct: 377 LHGLCKAR 384
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD + L+ ++C L EA+ ++ +G AG PD Y ++ C + K SEA +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
K+M + G+ P Q T L L + +A ++ + GY +Y ++ G
Sbjct: 288 YKKM-KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
K E + A ++ M RG P ++ GL
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 4/214 (1%)
Query: 118 ALAVLQRTLRSG-CLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
A VL L+ G V ++LL L R L ++L EM PD + N +
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKG--LCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYG 236
+ C +L +A+++ M G+GC ++GI+I A C+ K EA +K+M G
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF-MG 242
Query: 237 LTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAG 296
L L ++ + + + + + G S +Y +I G + + A
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 297 KVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
++ M ERG P + +I+GL + + K A
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
I+ EM G P+ + ++S A D+ E KVL M G ++Y I I ++C
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ +K+ EA+ L+ M + G+ P T L D +A ++ + + G
Sbjct: 269 KRKKSKEAKALLDGM-LSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
E Y +I + ++ A + E+ ++P + + ++ GLA
Sbjct: 328 ECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLA 373
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
AL + G P T L S L R L + EM P+ T N ++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSG-LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
C +++A + LK M G +PD+ SY +I +C + SEA+ V GL
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK------VFVDGL 603
Query: 238 TPGQGTL-----VGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREY 292
G L GL + +A+ + + + + G + Y V+I+G L+ ++
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 293 VLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
L ++ M +RG P + +I+ + ++K A +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 174 NYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVV 233
N L+ LC ++ EAV + K + G PD +Y ++ +C+V++ ++M +M+
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 234 KYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYV 293
+P + + L LR I +A+ +++ + G S Y +I+ + R++
Sbjct: 326 -LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 294 LAGKVVIRMTERGFIP 309
A + RM + G P
Sbjct: 385 EAELLFDRMGKIGLRP 400
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
P+ T N L++ C ++ E V++ + M G + ++ +Y +I + R AQ +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
KQMV G+ P T L L N + +A+ + E+L++ +Y ++IEG
Sbjct: 458 FKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ + + ++ +G P + + +I G
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 7/179 (3%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM PD T + L++ C D+L EA + + M C P+ +Y +I C+ +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ E +L ++M + GL T L RD A + + + +G +Y
Sbjct: 415 RIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFI-PYIRVRQKIIEGLASINE----WKIACAV 333
+++G L K + VV +R + P I +IEG+ + W + C++
Sbjct: 474 NTLLDG-LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 117 VALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
+ALA+L + ++ G P T L + + + + +VA ++ +M +GY PD T L
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQMVEMGYRPDTITFTTL 196
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQM----- 231
+ L ++ +EAV ++ M GC P+ +YG+V+ +C+ A +L+ +M
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 232 ---VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLE 288
VV Y T++ R D A+ + +E +G +Y +I
Sbjct: 257 EANVVIY------STVIDSLCKYRHEDD---ALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 289 KREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKI 329
+ A +++ M ER P + +I+ A + E K+
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALID--AFVKEGKL 346
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N L++ C D+L +A ++ + M C PD +Y +I C+ ++ + +L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
++M + GL T L L + D A ++ + + +G +Y ++++G
Sbjct: 423 FREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----WKIACAV 333
+ A +V M + I + +IEG+ + W + C++
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 117 VALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
+ALA+L + ++ G P T L + + + + +VA ++ +M +GY PD T L
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQMVEMGYRPDTITFTTL 196
Query: 177 LSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYG 236
+ L ++ +EAV ++ M GC P+ +YG+V+ +C+ T A +L+ +M
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA-K 255
Query: 237 LTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAG 296
+ + +L R + A+ + + +E +G +Y +I + A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 297 KVVIRMTERGFIPYIRVRQKIIEGL 321
+++ M E+ P + +I+
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAF 340
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
P+ + + L+ LC V +L EA + MG GC P + +Y ++I A+C +A +L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
+M+ + G P T L L + I +A + + K+ +Y +I G
Sbjct: 324 FDEMIPR-GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
+ V A +++ M +R P +R +++EGL + +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
+M G P T L+ +LC + +A + M GC P+ ++Y ++I +CR
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
K EA + ++M VK + P T L + + A E++ +EK ++
Sbjct: 351 KIEEANGVCRKM-VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
++EG + A ++ RM + G P I +I+GL
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 64/158 (40%), Gaps = 2/158 (1%)
Query: 164 IGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGG-AGCIPDSNSYGIVIGAMCRVRKTS 222
IG+ D LL C L +A+KV M C P+S SY I+I +C V +
Sbjct: 224 IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE 283
Query: 223 EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVV 282
EA L QM K G P T L AL I +A + + + G +Y V+
Sbjct: 284 EAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 283 IEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
I+G + A V +M + P + +I G
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 151 PLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGI 210
P ++L M G PD + N L+ LC + A K+L M PD ++
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 211 VIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
+I A C+ K A + M+ K G++ + T L + R A+ ++E L K
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRK-GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 271 GYSVGFESYEVVIE----GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
S V+++ GC K E + GK+ + G +P + +++GL
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKI----NKLGLVPSVVTYTTLVDGL 591
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 2/218 (0%)
Query: 122 LQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLC 181
L R LR T+ ++ + W + P ++ +L EM G +P+ T N +L
Sbjct: 183 LFRALRGRFSVDTVTYNVILNGWCLIKRTPKAL-EVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 182 AVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQ 241
Q+ A + M C D +Y V+ + A+++ +M+ + G+ P
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI-REGVLPSV 300
Query: 242 GTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIR 301
T + L ++ A+ M E + + GY +Y V+I G E+ +++ R
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 302 MTERGFIPYIRVRQKIIEGLASINEWKIACAVRQRFAA 339
M G P + +I + +E + A + ++ +
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L M S G HPD T N LL LC ++ +A+ L+ + + + +Y I+I +C
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
+ K +A L + +K G++P T + + LR R R+A E+ ++KE
Sbjct: 441 KADKVEDAWYLFCSLALK-GVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 154 VANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIG 213
V N+L+ S G+ P+ T N L++ C ++ + +K+L M G D+ +Y +
Sbjct: 311 VLNVLV---SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 214 AMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYS 273
C+ K S A+ ++ +MV G+ P T L L + I +A+ +E L+K
Sbjct: 368 GYCQAGKFSAAEKVLGRMV-SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 274 VGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
VG +Y ++I+G + + A + + +G P + ++ GL W+ A
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREA 483
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++M G + T L+ + C+V + +A+ + M AGC PD+ Y +I +C
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 217 RVRKTSEAQDLMKQM--------VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLE 268
+VR+ +A +++++ ++ Y + L+GLF + + EM+ +E
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNM------LIGLFC---DKNNTEKVYEMLTDME 573
Query: 269 KEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
KEG +Y +I + +++ +++ +M E G P + +I+ S+ E
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 153 SVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGA-GCIPDSNSYGIV 211
S+ IL +M + T +++ + +AV++ G+ GC + Y +
Sbjct: 129 SMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSL 188
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
+ A+C V+ A L+++M+ K GL P + T L + +++A E ++ + + G
Sbjct: 189 LHALCDVKMFHGAYALIRRMIRK-GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRG 247
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
++ +++IEG L A ++V +MT+ GF+P I+ +IE ++ E
Sbjct: 248 FNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 35/255 (13%)
Query: 115 FPVALAVLQRTLRSGCLPVPQTHVLLSSAW---------------LDRRLL--PLSVANI 157
F A A+++R +R G P +T+ +L + W + RR P ++
Sbjct: 198 FHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL 257
Query: 158 LLE-----------------MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAG 200
L+E M G+ PD T N L+ ++ ++ +++ G
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG 317
Query: 201 CIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQA 260
D ++Y +I A+ ++ K EA L+ V+ G P + + N A
Sbjct: 318 LCVDIDTYKTLIPAVSKIGKIDEAFRLLNN-CVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 261 IEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
++ + + Y ++I C ++V A ++ MTE G +P R + +G
Sbjct: 377 FSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
Query: 321 LASINEWKIACAVRQ 335
L + + +A + Q
Sbjct: 437 LKNGGKHDLAMRIEQ 451
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++M G + T L+ + C+V + +A+ + M AGC PD+ Y +I +C
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 217 RVRKTSEAQDLMKQM--------VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLE 268
+VR+ +A +++++ ++ Y + L+GLF + + EM+ +E
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNM------LIGLFC---DKNNAEKVYEMLTDME 573
Query: 269 KEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
KEG +Y +I + +++ +++ +M E G P + +I+ S+ E
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++M G + T L+ + C+V + +A+ + M AGC PD+ Y +I +C
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 217 RVRKTSEAQDLMKQM--------VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLE 268
+VR+ +A +++++ ++ Y + L+GLF + + EM+ +E
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNM------LIGLFC---DKNNAEKVYEMLTDME 573
Query: 269 KEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
KEG +Y +I + +++ +++ +M E G P + +I+ S+ E
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 169 DCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLM 228
D + L+SSL + E +L+ M GC PD+ +Y ++I C + A ++
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 229 KQMVVKYGLTP---GQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG 285
+MV K GL P ++G+F ++ +A + E + + G S SY +V +G
Sbjct: 317 DEMVEK-GLKPDVISYNMILGVFFRIKK---WEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Query: 286 CLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
E ++ A ++ M +G+ P R+ +EG
Sbjct: 373 LCEGLQFEEAAVILDEMLFKGYKP----RRDRLEGF 404
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 101 YSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLE 160
YS ++S +++ V++ +L+ GC P T+ +L + + S +L E
Sbjct: 261 YSTLISSLIKAGRSNEVSM-ILEEMSEKGCKPDTVTYNVLINGFCVENDSE-SANRVLDE 318
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M G PD + N +L + + EA + + M GC PD+ SY IV +C +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 221 TSEAQDLMKQMVVKYGLTPGQGTLVGLFAAL 251
EA ++ +M+ K G P + L G L
Sbjct: 379 FEEAAVILDEMLFK-GYKPRRDRLEGFLQKL 408
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 154 VANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIG 213
V+ IL EM G PD T N L++ C + A +VL M G PD SY +++G
Sbjct: 277 VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILG 336
Query: 214 AMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYS 273
R++K EA L + M + G +P + +F L +A +++ + +GY
Sbjct: 337 VFFRIKKWEEATYLFEDM-PRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
Query: 274 VGFESYEVVIEGCLEKREYVLAGKVV 299
+ E ++ E + + KV+
Sbjct: 396 PRRDRLEGFLQKLCESGKLEILSKVI 421
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 2/171 (1%)
Query: 152 LSVANILLE-MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGI 210
L AN +L+ M S G P+ T N L++ C + + + +++ + M G + D+ +Y
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 211 VIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
+I C + K A++L ++MV + + P + L L N + +A+E+ E +EK
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 271 GYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ Y ++I G + A + + +G P ++ +I GL
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 74/175 (42%), Gaps = 1/175 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
N+ EM G+ D L+ C + + K+L+ M PD ++ +I
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ K EA++L K+M+ + G++P T L + +A M++ + +G
Sbjct: 328 VKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
++ ++I G + ++ +M+ RG + +I+G + + ++A
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 164 IGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSE 223
+GY PD T + L++ LC +++EA++++ M G P + ++ +C K S+
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 224 AQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI 283
A L+ +M V+ G P + T + + + A+E++ +E+ + Y ++I
Sbjct: 196 AVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 284 EGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEW 327
+G + A + M +GF I + +I G W
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 5/187 (2%)
Query: 80 IVDEMLQSFIPLRPRSKPQLAYSY--ILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTH 137
++D +Q F +R S ++ Y + ++ S F +A A+ G +P T+
Sbjct: 24 MIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESR-FELAEAIYWDMKPMGFSLIPFTY 82
Query: 138 VLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMG 197
S + L + +L +M ++G+ PD N L LC +++ AV+ M
Sbjct: 83 SRFISGLCKVKKFDL-IDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 198 GAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDI 257
G PD SY I+I + R K ++A ++ M ++ G++P L L R +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM-IRSGVSPDNKACAALVVGLCHARKV 200
Query: 258 RQAIEMI 264
A EM+
Sbjct: 201 DLAYEMV 207
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD + N L+S LC ++ EA+K+ + M G C PD ++ +IG + R +K S A +
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 228 MKQMVVKYGLT 238
QM+ K G T
Sbjct: 488 WDQMMDK-GFT 497
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 87/213 (40%), Gaps = 2/213 (0%)
Query: 121 VLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSL 180
VL L+ P T+ +L + W R L + A I +M G PD N +L L
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNL-IEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 181 CAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPG 240
+ ++A+K+ M G P+ SY I+I C+ A + M V GL P
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM-VDSGLQPD 402
Query: 241 QGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVI 300
L + + E+++ ++++G+ ++Y +I+ ++ A ++
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYN 462
Query: 301 RMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+M + P I I++ +++ AV
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 495
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 1/179 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+ E+ P + N L++ C V L E ++ M + PD +Y +I A+C
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ K A L +M K GL P L N +I E + + +G
Sbjct: 322 KENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQ 335
Y ++ G + + V A +V M RG P +I+G + + A +R+
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 154 VANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIG 213
V +LLEM G + T N L+++LC + + EA+ + MG GC PD+ +Y ++I
Sbjct: 306 VEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIR 365
Query: 214 AMCRVRKTSEAQDLMKQM-VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGY 272
++ + + E +++ +M YG + G L + A+ + + ++ G
Sbjct: 366 SLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGC 425
Query: 273 SVGFESYEVVI 283
G ++Y++++
Sbjct: 426 KPGIKTYDLLM 436
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 174 NYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVV 233
N +L + ++ EA+++ + M G G PD +Y +IG C K S+A DLM +M
Sbjct: 400 NVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM-D 458
Query: 234 KYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKRE 291
G TP L L N ++A E ++ +E G + ++ +VIEG ++ E
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 97 PQLAYSYI-LSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA 155
P+ Y +I + SS +L TL G +P ++ +++ + L +
Sbjct: 260 PKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL-VEGE 318
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVL-KGMGGAGCIPDSNSYGIVIGA 214
+LL M S G+ P + +LC +L EAV V+ K M C+P Y ++I
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 215 MCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSV 274
+C K+ EA +K+M + + T L L + +A +++E + + +
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 275 GFESYEVVIEG-CLEKREY 292
G E+Y ++I+G C R Y
Sbjct: 439 GVETYHMMIKGLCDMDRRY 457
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 97 PQLAYSYI-LSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA 155
P+ Y +I + SS +L TL G +P ++ +++ + L +
Sbjct: 260 PKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKL-VEGE 318
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVL-KGMGGAGCIPDSNSYGIVIGA 214
+LL M S G+ P + +LC +L EAV V+ K M C+P Y ++I
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 215 MCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSV 274
+C K+ EA +K+M + + T L L + +A +++E + + +
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 275 GFESYEVVIEG-CLEKREY 292
G E+Y ++I+G C R Y
Sbjct: 439 GVETYHMMIKGLCDMDRRY 457
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 97/246 (39%), Gaps = 7/246 (2%)
Query: 81 VDEMLQSFIPLRPRSKPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLP--VPQTHV 138
V E + F +R + P L Y L Y A VL + +G P V T++
Sbjct: 218 VKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 139 LLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQ-LAEAVKVLKGMG 197
L A + + N +M G+ P+ L+ +LC ++ + EA++V M
Sbjct: 278 LSGYAHAGKMADAYDLMN---DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Query: 198 GAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDI 257
GC D +Y +I C+ + ++ M K G+ P Q T + + A
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR-KKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 258 RQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKI 317
+ +E+IE +++ G Y VVI + E A ++ M G P + +
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 318 IEGLAS 323
I G S
Sbjct: 454 INGFTS 459
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 134 PQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVL 193
P+ V+L + ++ +V +L EMP G PD LL +LC + EA KV
Sbjct: 167 PELFVVLMRRFASANMVKKAV-EVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 194 KGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRA 253
+ M P+ + ++ CR K EA++++ QM + GL P L +
Sbjct: 226 EDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM-KEAGLEPDIVVFTNLLSGYAH 283
Query: 254 NRDIRQAIEMIEFLEKEGYSVGFESYEVVIEG-CLEKREYVLAGKVVIRMTERGFIPYIR 312
+ A +++ + K G+ Y V+I+ C ++ A +V + M G I
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 313 VRQKIIEGL 321
+I G
Sbjct: 344 TYTALISGF 352
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 151 PLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKG-MGGAGCIPDSNSYG 209
P + N+L+ M PD T N +++ LC + ++ +A+KVL M G C PD+ +
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 210 IVIGAMCRVRKTSEAQDLMKQMVVKYGLTPG----QGTLVGLFAALRANRDIRQAIEMIE 265
V+ + + EA D++ +++ + + PG + GLF + + +A+ +
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGD----EAMSVFG 543
Query: 266 FLEKEGYSVGFESYEVVIEG 285
LEK + +Y ++I+G
Sbjct: 544 QLEKASVTADSTTYAIIIDG 563
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 96 KPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA 155
KP +A+S L Y L ++ A+ V++ + SG +P + L + R + ++
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM- 161
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
++ +M GY + T N L+ LC + L ++++ ++ + G P++ +Y ++ A
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ R T EA L+ +++VK G P + L A+ + L +G+
Sbjct: 222 YKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 276 FESYEVVIEGCL 287
SY +++ CL
Sbjct: 281 VVSYNILLR-CL 291
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G+ P+ LL LC ++L +A++V++ M +G IPD+++Y ++ +C+ A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE 284
L+++M +G T L L + Q+++ +E L ++G + +Y ++E
Sbjct: 161 MQLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE 219
Query: 285 GCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
++R A K++ + +G P + ++ G
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
L + I E+ +G PDC ++ C + + +A + + +G P + I+
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTIL 449
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
IGA R S+A+ + + M + GL T L + + E+I+ + G
Sbjct: 450 IGACSRFGSISDAESVFRNMKTE-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
S +Y ++I + + A +++ + RGF+P +I G + +++ A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 152 LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
L + I E+ +G PDC ++ C + + +A + + +G P + I+
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTIL 449
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
IGA R S+A+ + + M + GL T L + + E+I+ + G
Sbjct: 450 IGACSRFGSISDAESVFRNMKTE-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 272 YSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
S +Y ++I + + A +++ + RGF+P +I G + +++ A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+ EM G P+ T N ++ LC ++ +A ++L M GC PDS +Y MC
Sbjct: 281 VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MC 334
Query: 217 ---RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYS 273
R+ K SE L +M ++ G+ P T V L ++ + + + +++ G +
Sbjct: 335 LFSRLEKPSEILSLFGRM-IRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDT 393
Query: 274 VGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIE 319
+Y VI+ ++K +A + M ERG P R R +++E
Sbjct: 394 PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP--RRRPELVE 437
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 154 VANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIG 213
+ ++ +M G PD T N L++S V ++ EA+ + + + + C PD SY +I
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 214 AMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYS 273
+ + EA K+M K GL P T L + A + E + +G
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEK-GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ 579
Query: 274 VGFESYEVVIEGCLEKR-EYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWK 328
+Y ++++ CLEK A + +M ++G P + ++E L S++ K
Sbjct: 580 PNIVTYNILLD-CLEKNGRTAEAVDLYSKMKQQGLTP-DSITYTVLERLQSVSHGK 633
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 176 LLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKY 235
+L SLC + EA+++L + G + D+ Y V A+ ++++ S DL ++M K
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM-KKD 471
Query: 236 GLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLA 295
G +P T L A+ ++ +AI + E LE+ SY +I CL K V
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI-NCLGKNGDVDE 530
Query: 296 GKVVIR-MTERGFIPYIRVRQKIIEGLASINEWKIA 330
V + M E+G P + ++E ++A
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L EM G D T N LL+ LC + ++A ++L+ M PD ++ +I
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ EAQ+L K+M ++ + P T + L + + A + + + +G
Sbjct: 258 KQGNLDEAQELYKEM-IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
+Y +I G + R K+ RM+ GF I +I G + + ++A
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 99/224 (44%), Gaps = 7/224 (3%)
Query: 101 YSY-ILSYTLQSSHPFPVALAVLQRTLRSGCLP-VPQTHVLLSSAWLDRRLLPLSVANIL 158
YSY I+ L F +AL+V+ + ++ G P V L++ R+ +++
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF--DAIDLV 162
Query: 159 LEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRV 218
+M +G+ PD N ++ C + + +AV++ M G D+ +Y ++ +C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 219 RKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFES 278
+ S+A LM+ MV++ + P T + +A+++ E + + +
Sbjct: 223 GRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 279 YEVVIEG-CLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
Y +I G C+ R A +++ M +G +P + +I G
Sbjct: 282 YNSLINGLCMHGR-VDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 118 ALAVLQRTLRSGCLP-VPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYL 176
A AV +R +G P V + L+S A + L+ V + EM G PD + N L
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAA--KNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 177 LSSLCAVDQLAEAVKVL-KGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKY 235
+S + + EA K+L + + AG +P ++Y I++ A+C+ T A +L K + K
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL--KS 182
Query: 236 GLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLA 295
+ P T L L +R + M+ L+K GY+ +Y +++ + +
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 296 GKVVIRMTERGF 307
++ ++M + G+
Sbjct: 243 LQLFLKMKKEGY 254
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G+ PD TC +L++LC + A+ + M G P+ ++ +I +C+ +A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 225 QDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEM-IEFLEKEGYSVGFESYEVVI 283
+++++M V+ G P T L L +A + ++ + + Y +Y +I
Sbjct: 307 FEMLEEM-VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 284 EGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
G ++ + A + RM E+G P + +I G
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
++++M + G P T N +L + + A V M G +PDS+SY +++
Sbjct: 169 MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R K EA + M+ + G P T + AL N + +AI + G+
Sbjct: 229 RDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 287
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
++ +I+G +K A +++ M G+ P + +I+GL
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 163 SIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTS 222
S+G P T ++S C + A+K M GC+PDS +YG +I +C+
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 223 EAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
EA L + M+ + GL+P + T V L D A+ ++E L+K+
Sbjct: 586 EACKLYEAMIDR-GLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 126 LRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQ 185
LR G P T+ + + + L +L M S PD T + L++ C +
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLN-DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 186 LAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLV 245
+ +++ M G + ++ +Y +I C+V AQDL+ M + G+ P T
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM-ISSGVAPNYITFQ 290
Query: 246 GLFAALRANRDIRQAIEMIEFLEK-EGYSVGFE 277
+ A+L + +++R+A ++E L+K EG+ + E
Sbjct: 291 SMLASLCSKKELRKAFAILEDLQKSEGHHLEDE 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 4/199 (2%)
Query: 135 QTHVLLSSAWLDRRLLP---LSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVK 191
+ HV++ +A +DR + N+ EM G PD T + ++ S C + +A +
Sbjct: 73 KAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQ 132
Query: 192 VLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAAL 251
+L+ M PD ++ +I A+ + K SEA+++ M ++ G+ P T +
Sbjct: 133 LLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM-LRRGIFPTTITYNSMIDGF 191
Query: 252 RANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
+ A M++ + + S ++ +I G + + ++ M RG +
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 312 RVRQKIIEGLASINEWKIA 330
+I G + + A
Sbjct: 252 VTYTTLIHGFCQVGDLDAA 270
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 151 PLSVANILL-EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYG 209
L++A++L+ EM +G +PD T +++ C ++ +A ++ K M C+ +S +Y
Sbjct: 180 DLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYS 239
Query: 210 IVIGAMCRVRKTSEAQDLMKQMVVKYG---LTPGQGTLVGLFAALRANRDIRQAIEMIEF 266
++ +C+ A +L+ +M + G ++P T + A R + +A+ +++
Sbjct: 240 RILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDR 299
Query: 267 LEKEGYSVGFESYEVVIEGCLEKREYVLA-GKVVIRMTERGFIPYIRVRQKIIEGLASIN 325
+ G + V+I+G LE E V A K++ ++ + G + L +
Sbjct: 300 MGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMK 359
Query: 326 EWKIA 330
W+ A
Sbjct: 360 RWEEA 364
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 16/241 (6%)
Query: 96 KPQ-LAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAW-------LDR 147
KP + ++ I++ + +S + A+ + ++ SGC P T L +
Sbjct: 386 KPDTILFNAIINASSESGN-LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 148 RLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNS 207
RLL + + + +L+ P+ TCN L+ + C ++ EA ++ M G PD +
Sbjct: 445 RLLDMMLRDEMLQ-------PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 208 YGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFL 267
+ + A R+ T A+D++ ++ + P T + + +A+ +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 268 EKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEW 327
++ G + +I+G L + G+VV M E G P + ++ +S+ +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 328 K 328
K
Sbjct: 618 K 618
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 2/213 (0%)
Query: 121 VLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSL 180
VL L+ P T+ +L + W R L + A I +M G PD N +L L
Sbjct: 284 VLFDKLKERFTPNMMTYTVLLNGWCRVRNL-IEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 181 CAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPG 240
+ ++A+K+ M G P+ SY I+I C+ A + M V GL P
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM-VDSGLQPD 401
Query: 241 QGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVI 300
L + + E+++ ++++G+ ++Y +I+ ++ ++
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 461
Query: 301 RMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+M + P I I++ +++ AV
Sbjct: 462 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 2/213 (0%)
Query: 121 VLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSL 180
VL L+ P T+ +L + W R L + A I +M G PD N +L L
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNL-IEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 181 CAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPG 240
+ ++A+K+ M G P+ SY I+I C+ A + M V GL P
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM-VDSGLQPD 402
Query: 241 QGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVI 300
L + + E+++ ++++G+ ++Y +I+ ++ ++
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 301 RMTERGFIPYIRVRQKIIEGLASINEWKIACAV 333
+M + P I I++ +++ AV
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 9/187 (4%)
Query: 130 CLPVPQTHVLLSSAWLDR-------RLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCA 182
C P +T+ +L A L R + +V ++ +M G PD N L+
Sbjct: 241 CRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVL 300
Query: 183 VDQLAEAVKVLKGMGGA-GCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQ 241
+ +A+++ M C P+S +Y +I +C +T A++L+ +M K G P
Sbjct: 301 SLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK-GFVPNG 359
Query: 242 GTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIR 301
+ L A + +I A++ + + + G V F SY +++ K +Y A +++
Sbjct: 360 KSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEM 419
Query: 302 MTERGFI 308
+ E+ +
Sbjct: 420 LREKQLV 426
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L M S G PD T + L++ C ++ +++ M G + ++ +Y +I C
Sbjct: 32 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEK 269
+V AQDL+ +M + G+ P T + A L + +++R+A ++E L+K
Sbjct: 92 QVGDLDAAQDLLNEM-ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M + G PD T N L L VD + EA ++L M +GC P +Y +I + R+
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 221 TSEAQDLMKQMVVKYGLTPGQ---GTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
S+A DL + M K G+ P + G+L+ FA + + +AI+ +E+ G
Sbjct: 601 LSDAVDLYEAM-EKTGVKPNEVVYGSLINGFA---ESGMVEEAIQYFRMMEEHG 650
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 36/181 (19%)
Query: 165 GYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEA 224
G PD T N +++ C ++ A K+L M GC P+ +Y ++ C+V K EA
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 225 QDLMKQMVVKYGL---TPGQGTLVGLFA----------------ALRANRDI-------- 257
+ + V K GL T G TL+ F A R D
Sbjct: 323 KQTFDE-VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 258 --------RQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
+A++M++ EG + SY +++ E A K + M+ERG P
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Query: 310 Y 310
+
Sbjct: 442 H 442
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 1/171 (0%)
Query: 151 PLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGI 210
P ++ L +M +G+ PD T L++ C +++ EA+ ++ M G PD Y
Sbjct: 123 PYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTT 182
Query: 211 VIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKE 270
+I ++C+ + A L QM YG+ P L L + R A ++ + K
Sbjct: 183 IIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 271 GYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
++ +I+ +++ +++ A ++ M P I +I G
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 130 CLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEA 189
C P T+ L + + LP+ + EM G P+ + + L+ + C + +A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGL-EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 190 VKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFA 249
+K M G +P+ +Y +I A C++ S+A L +M ++ G+ T L
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-LQVGVEWNVVTYTALID 445
Query: 250 ALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
L +++A E+ ++ G SY +I G ++ + A +++ + RG P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 310 YIRVRQKIIEGLASINE 326
+ + I GL S+ +
Sbjct: 506 DLLLYGTFIWGLCSLEK 522
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 173 CNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMV 232
C+ +LS LC ++ EA+ + M G PD +Y IVI +C++ K A L +M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 233 VKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE-----GCL 287
K + P T L L + +A +++ L G ++ Y +VI+ GC+
Sbjct: 426 DKR-ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
E E + KVVI E G P + +I G
Sbjct: 485 E--EALELFKVVI---ETGITPSVATFNSLIYG 512
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 164 IGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSE 223
+GY PD N LL+ LC +++EA++++ M G P + ++ +C K S+
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 224 AQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVI 283
A L+ +M V+ G P + T + + + A+E++ +E+ + Y ++I
Sbjct: 212 AVVLIDRM-VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 284 EGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEW 327
+G + A + M +GF I +I G + W
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L EM G P+ T N L+ C ++L EA++++ M GC PD ++ I+I C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
+ + + +L ++M ++ G+ T L + + A ++ + +
Sbjct: 415 KANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE----WKIACA 332
SY+++++G + E A ++ ++ + I + II G+ + ++ W + C+
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 333 V 333
+
Sbjct: 534 L 534
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M +G+ P T N L++ LC ++++AV ++ M G P+ +YG V+ MC+ +
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 221 TSEAQDLMKQM--------VVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGY 272
T+ A +L+++M VKY + + L + + A + +E +G+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSI---------IIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 273 SVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYI 311
+Y +I G + K++ M +R P +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Query: 131 LPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAV 190
LP P ++ +L +A + L + EM S P CN ++ C ++
Sbjct: 547 LPTPISYSILVNALCSKGHLA-EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 191 KVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKY-GLTPGQGTLVGLFA 249
L+ M G +PD SY +I R S+A L+K+M + GL P T +
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 250 ALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
+++A ++ + + G + +Y +I G + + A ++ M +RGF P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 92/220 (41%), Gaps = 4/220 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
AL + ++ + SG +P TH L + + ++ EM +G P+C + N L+
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIE-KADGLVREMREMGPSPNCVSYNTLI 198
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
LC+V+ + +A+ + M G P+ + I++ A+C+ + + ++
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 238 TPGQGTLV---GLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVL 294
+V L + N ++ QA+E+ + + ++ Y V+I G V
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 295 AGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVR 334
A + M +RG P + +I L ++ AC +
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 173 CNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMV 232
C+ +LS LC ++ EA+ + M G PD +Y IVI +C++ K A L +M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 233 VKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIE-----GCL 287
K + P T L L + +A +++ L G ++ Y +VI+ GC+
Sbjct: 426 DKR-ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEG 320
E E + KVVI E G P + +I G
Sbjct: 485 E--EALELFKVVI---ETGITPSVATFNSLIYG 512
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 179 SLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLT 238
SL +V + EA ++ K M AG PD+ +Y ++ +C+ ++ EA+ ++ QM + G
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQ-GCF 437
Query: 239 PGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGKV 298
P T L N ++ +A+ + ++G+ + +V+I+G + ++ A
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 299 VIRMTERGFI-PYIRVRQKIIEGLASINE 326
++ M + + P+ + +I+ L I +
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKK 526
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
EM G P+ T L++ C +++ A+++ M D +YG +I C+
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
A L ++ + GL P L + R + AI++ + + +G S +Y
Sbjct: 675 DMKTAYTLFSELP-ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLA 322
+I+G L+ LA + + + G +P + ++ GL+
Sbjct: 734 TTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLS 776
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L E+ S GY + L+ L +L EA + M G G D + I+I A+C
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R ++ EA++L + Y L A RA ++ + M++ ++++ S +
Sbjct: 389 RSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAG-EMESVMRMMKKMDEQAVSPDY 447
Query: 277 ESYEVVIEGCLEKREYVLAGKVVIRMTERG 306
++ ++I+ ++++ ++LA + + M +G
Sbjct: 448 NTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 157 ILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMC 216
+L EM PD N L++ LC ++ EA +VL M GC P++ +Y ++I C
Sbjct: 313 LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 217 RVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGF 276
R+ +++ M+ P T V + A L ++ A ++E + K+ S G
Sbjct: 373 RIEDFDSGLNVLNAMLASRH-CPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGS 431
Query: 277 ESYEVVI 283
+++ ++
Sbjct: 432 GAWQNLL 438
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 101/229 (44%), Gaps = 6/229 (2%)
Query: 104 ILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLP--LSVANILLEM 161
+++ L S + AL+ +++ + GC P+P ++ + ++ S+ NI+ E+
Sbjct: 482 VVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQEL 541
Query: 162 PSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKT 221
+ PD T +++ LC + A ++ M G P Y +IG++ + +
Sbjct: 542 DFV---PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 222 SEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEV 281
EA++ +M ++ G+ P + + + N I +A E++E + K +Y V
Sbjct: 599 VEAEETFAKM-LESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 282 VIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
+I G ++ + + +M E G P + + +I ++K +
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFS 706
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSY-GIVIGAMCRV 218
E+ G PDCG N L+SSL ++ A+KV+K M G PDS ++ + IG M
Sbjct: 305 EISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSK 364
Query: 219 RKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFES 278
Q + + L P T+V L N ++ +++ +++ ++GY +
Sbjct: 365 EFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHA 424
Query: 279 YEVVIEGCLEKREYVLAGKVVIRMTERG 306
E++ +R A + + ERG
Sbjct: 425 LELLTTALCARRRANDAFECSWQTVERG 452
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
N+L EM +G+ PD T + L + ++ A+ V + +G ++ + I++ A+
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C+ K +A++++ + + K GL P + + D+ A IE +EK+G
Sbjct: 365 CKEGKIEKAEEILGREMAK-GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEW 327
+Y +I E E A K V +M +G P + +I G E+
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 168 PDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDL 227
PD T N L++ LC + AV L G IP++ SY +I A C+ ++ A L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 228 MKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCL 287
+ QM + G P T L L + + A+ M L G S Y +++ G
Sbjct: 403 LLQMAER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 288 EKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGL 321
+ ++ A + M +R +P V +I+G
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 96 KPQLAYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVA 155
KP +A IL L VA+ L + G +P ++ L A+ + ++ +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA-S 400
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
+LL+M G PD T L+ L + +AV + + G PD+ Y +++ +
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
C+ + A+ L +M+ + + P L + D +A ++ ++G V
Sbjct: 461 CKTGRFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 276 FESYEVVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVR 334
+ +I+G A + RM E +P II+G + + +A A++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY--VKQQDMATAIK 576
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 3/210 (1%)
Query: 100 AYSYILSYTLQSSHPFPVALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILL 159
AY+ ++ Y L + VA ++ SGC QT+ L +L++ L P I
Sbjct: 245 AYNQVIQY-LAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGL-PYKAFEIYE 302
Query: 160 EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVR 219
M D T ++ SL +L A K+ + M P + + ++ +M +
Sbjct: 303 SMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 362
Query: 220 KTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESY 279
+ + + +M +G P V L + + A+ + + ++K G+ F Y
Sbjct: 363 RLDTSMKVYMEMQ-GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 280 EVVIEGCLEKREYVLAGKVVIRMTERGFIP 309
++IE + + +A V M + GF+P
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 2/213 (0%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
AL VL+R G P T+ L + L L EM S +P+ T + L+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA-DAERRLHEMDSKKINPNVITFSALI 125
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ +L++ V K M P+ +Y +I +C + EA ++ M+ K G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK-GC 184
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
TP T L + + I++++ + + G + S +I+G + + LA
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASINEWKIA 330
V MT G IP IR ++ GL + E + A
Sbjct: 245 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 161 MPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRK 220
M G + T + +++ + A A V + M G PD Y +I A C +
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 221 TSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYE 280
A +K+M K P T + + + D+R+++E+ + + + G ++
Sbjct: 570 MDRAIQTVKEMQ-KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 281 VVIEGCLEKREYVLAGKVVIRMTERGFIPYIRVRQKIIEGLASINE 326
+I G +EKR+ A +++ MT G KI++G AS+ +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 3/219 (1%)
Query: 118 ALAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLL 177
A AV + ++ G P + + SA+ + ++ + EM + + P T ++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK-EMQKLRHRPTTRTFMPII 596
Query: 178 SSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
+ +++V M GC+P +++ +I + R+ +A +++ +M + G+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA-GV 655
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVGFESYEVVIEGCLEKREYVLAGK 297
+ + T + + D +A E L+ EG V +YE +++ C + A
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 298 VVIRMTERGFIPYIRVRQKIIEGLASINE-WKIACAVRQ 335
V M+ R V +I+G A + W+ A ++Q
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 14/236 (5%)
Query: 119 LAVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLS 178
L ++R P T+ + SA+++ L+ +L EM +G + T N LL
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD-RARQVLAEMARMGVPANRITYNVLLK 495
Query: 179 SLCAVDQLAEAVKVLKGMG-GAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGL 237
C Q+ A +L+ M AG PD SY I+I + ++ A +M + G+
Sbjct: 496 GYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTR-GI 554
Query: 238 TPGQGTLVGLFAALRANRDIRQAIEMI-EFLEKEGYSVGFESYEVVIEGCLEKREYVLAG 296
P + + L A + + A + E + V ++ +++EG A
Sbjct: 555 APTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQ 614
Query: 297 KVVIRMTERGFIPYIRVRQKIIEGLASI----------NEWKIACAVRQRFAALKS 342
+VV RM E GF P + + G++ E K CAV+++ A S
Sbjct: 615 RVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDS 670
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 156 NILLEMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAM 215
NI+LEM S P + N LLS L ++ E+ ++L+ M +GC PD+ SY V+ +
Sbjct: 271 NIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL 330
Query: 216 CRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEGYSVG 275
+ + ++ +M+ + G P + L L + A+++ E +++
Sbjct: 331 YLTGRFGKGNQIVDEMIER-GFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGY 389
Query: 276 FESYEVVI 283
+ Y+++I
Sbjct: 390 GQVYDLLI 397
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 101 YSYILSYTLQSSHPFPVALAVLQRTLRSG-CLPVPQTHVLLSSAWLDRRLLPLSVANILL 159
Y+ I+ + F A V + LRS P +T+ LL S+ L +R L+V + L
Sbjct: 146 YNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSS-LLKRFNKLNVCYVYL 204
Query: 160 --------EMPSIGYHPDCGTCNYLLSSLCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIV 211
+M S G PD N ++ + ++ EA++V K M G P++ +Y +
Sbjct: 205 HAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYL 264
Query: 212 IGAMCRVRKTSEAQDLMKQMVVKYGLTPGQGTLVGLFAALRANRDIRQAIEMIEFLEKEG 271
+ +C + + K+M VK G+ P + L +L R + +A+E++ +
Sbjct: 265 VKGVCEKGRVGQGLGFYKEMQVK-GMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 272 YSVGFESYEVVI 283
S +Y V+
Sbjct: 324 LSPDMLTYNTVL 335
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 3/222 (1%)
Query: 120 AVLQRTLRSGCLPVPQTHVLLSSAWLDRRLLPLSVANILLEMPSIGYHPDCGTCNYLLSS 179
V + +R G P + +L + + ++ +L M G+ PD T + +++
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI-RLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 180 LCAVDQLAEAVKVLKGMGGAGCIPDSNSYGIVIGAMCRVRKTSEAQDLMKQMVVKYGLTP 239
LC ++ EA+ G +S Y +I + + + EA+ L ++M K G T
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK-GCTR 465
Query: 240 GQGTLVGLFAALRANRDIRQAIEMIEFL-EKEGYSVGFESYEVVIEGCLEKREYVLAGKV 298
L A +R + +AI + + + E+EG +Y +++ G ++ A K+
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 299 VIRMTERGFIPYIRVRQKIIEGLASINEWKIACAVRQRFAAL 340
M ++G P + + GL + AC + A +
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567