Miyakogusa Predicted Gene
- Lj3g3v2838500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2838500.1 gi|1370200|emb|Z73962.1|.path1.1
(196 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 319 8e-88
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 317 3e-87
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 313 7e-86
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 312 7e-86
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 312 1e-85
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 312 1e-85
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 312 1e-85
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 311 2e-85
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 311 2e-85
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 308 1e-84
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-relat... 296 4e-81
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-lik... 296 5e-81
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-r... 281 2e-76
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 273 4e-74
AT3G51290.2 | Symbols: | Protein of unknown function (DUF630) ;... 254 3e-68
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 91 6e-19
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 91 7e-19
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 89 1e-18
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 89 2e-18
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 89 2e-18
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 89 2e-18
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 88 5e-18
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 88 5e-18
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 88 5e-18
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 87 5e-18
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 87 8e-18
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 87 1e-17
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 86 2e-17
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 86 2e-17
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 86 2e-17
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 84 5e-17
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 84 7e-17
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 82 2e-16
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 82 2e-16
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 81 5e-16
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 81 5e-16
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 80 7e-16
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 80 1e-15
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 79 1e-15
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 79 1e-15
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 79 1e-15
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 79 2e-15
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 79 3e-15
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 79 3e-15
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 78 4e-15
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 78 4e-15
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 77 5e-15
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 77 5e-15
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 77 5e-15
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 77 6e-15
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 77 9e-15
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 77 1e-14
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 76 1e-14
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 75 3e-14
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 75 3e-14
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 75 4e-14
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 74 6e-14
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 74 6e-14
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 74 7e-14
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 74 8e-14
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 74 9e-14
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 73 1e-13
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 73 2e-13
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 72 2e-13
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 72 2e-13
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 72 3e-13
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 71 4e-13
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 71 4e-13
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 71 4e-13
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 71 5e-13
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 71 6e-13
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 70 7e-13
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 70 1e-12
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 70 1e-12
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 69 2e-12
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 69 2e-12
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972... 68 4e-12
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |... 68 4e-12
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 66 2e-11
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 66 2e-11
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 64 5e-11
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 64 5e-11
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 64 8e-11
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c... 64 9e-11
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 62 3e-10
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 62 3e-10
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 62 3e-10
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 62 3e-10
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 61 6e-10
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 60 7e-10
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 58 5e-09
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 57 5e-09
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 57 6e-09
AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 49 2e-06
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 319 bits (817), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 153/196 (78%), Positives = 164/196 (83%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN++KKWIPELRHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQX 180
DLR+D+Q+ IDHPGA PITT QGEELKK IG+ +Y+ECSSKTQQNVKAVFDAAIKVVLQ
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180
Query: 181 XXXXXXXXXXXXCVFL 196
CVFL
Sbjct: 181 PKQKKKKKNKNRCVFL 196
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 317 bits (813), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/193 (79%), Positives = 162/193 (83%)
Query: 4 ARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAG 63
+RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAG
Sbjct: 3 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAG 62
Query: 64 QEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLR 123
QEDYNRLRPLSYRGADV YENI+KKWIPELRHYAP VPI+LVGTKLDLR
Sbjct: 63 QEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLR 122
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQXXXX 183
+D+Q+ IDHPGA PITT QGEELKK IG+AVY+ECSSKTQQNVKAVFDAAIKVVLQ
Sbjct: 123 DDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQPPKQ 182
Query: 184 XXXXXXXXXCVFL 196
C FL
Sbjct: 183 KKKKKNKNRCAFL 195
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 313 bits (801), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 159/178 (89%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITTAQGEEL+K IGA Y+ECSSKTQ+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVL 178
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-like
2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 312 bits (800), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 157/179 (87%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YENI KKW+PEL+HYAP +PIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D+Q+L DHPGA ITTAQGEEL+K IGA YLECSSKTQQNVKAVFD AI+V L+
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 312 bits (799), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 159/179 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKW+PELRHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D+Q+ +HPGA PI+TAQGEELKK IGA Y+ECS+KTQQNVKAVFDAAIKVVLQ
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQ 179
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 312 bits (799), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 159/179 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKW+PELRHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D+Q+ +HPGA PI+TAQGEELKK IGA Y+ECS+KTQQNVKAVFDAAIKVVLQ
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQ 179
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-like
3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 312 bits (799), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 159/179 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKW+PELRHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D+Q+ +HPGA PI+TAQGEELKK IGA Y+ECS+KTQQNVKAVFDAAIKVVLQ
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQ 179
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 311 bits (797), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITTAQGEELKK IGA Y+ECSSKTQ+NVK VFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 311 bits (797), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 158/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITTAQGEELKK IGA Y+ECSSKTQ+NVK VFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVL 178
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 308 bits (789), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 157/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITT QGEELKK IGA Y+ECSSK+Q+NVK VFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 178
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-related
protein from plants 10 | chr3:17731561-17733241 FORWARD
LENGTH=208
Length = 208
Score = 296 bits (759), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 153/178 (85%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
S ++FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFS NVVV+G TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLD 121
AGQEDYNRLRPLSYRGADV YEN+ KKWIPEL+H+AP VPIVLVGTK+D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123
Query: 122 LREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
LREDR YL DHPG +P+TT+QGEEL+K IGA Y+ECSSKTQQNVKAVFDAAIKVV++
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIK 181
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like
10 | chr5:25237236-25238939 FORWARD LENGTH=215
Length = 215
Score = 296 bits (759), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 154/178 (86%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
S ++FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVVV+G+TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLD 121
AGQEDYNRLRPLSYRGADV YEN+ KKWIPEL+H+AP VP+VLVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLD 123
Query: 122 LREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
LRED+ YL DHPG +P+TTAQGEEL+K IGA Y+ECSSKTQQNVKAVFD+AIK V++
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVIK 181
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 |
RHO-related protein from plants 9 |
chr4:14278289-14279705 FORWARD LENGTH=209
Length = 209
Score = 281 bits (719), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 147/179 (82%), Gaps = 2/179 (1%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS ++FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDG VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDY+RLRPLSYRGAD+ YEN+ KKW+PELR +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D+ YL DH IT+ QGEEL+K IGAA Y+ECSSKTQQNVKAVFD AIKVVLQ
Sbjct: 121 DLRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 177
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 273 bits (699), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/174 (74%), Positives = 145/174 (83%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQE 65
FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNF+ANV+VDG TVNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
DYNR+RPLSYRGADV +ENI+KKW+PELRHYAPTVPIVLVGTK DLR++
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDN 137
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
Q+ ++PGA I QG+EL+K IGA Y+ECSSK Q NVKAVFD AIKVVL
Sbjct: 138 MQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLH 191
>AT3G51290.2 | Symbols: | Protein of unknown function (DUF630)
;Protein of unknown function (DUF632) |
chr3:19039980-19044215 FORWARD LENGTH=798
Length = 798
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/145 (80%), Positives = 127/145 (87%)
Query: 34 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXY 93
DYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADV Y
Sbjct: 635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 694
Query: 94 ENISKKWIPELRHYAPTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAA 153
EN+SKKWIPEL+HYAP VPIVLVGTKLDLR+D+Q+ IDHPGA PITTAQGEEL+K IGA
Sbjct: 695 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAP 754
Query: 154 VYLECSSKTQQNVKAVFDAAIKVVL 178
Y+ECSSKTQ+NVKAVFDAAI+VVL
Sbjct: 755 TYIECSSKTQENVKAVFDAAIRVVL 779
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E Y+ L PL YRGA V ++ ++ W+ EL +H +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFD 171
E R+ + T G EL + G ++E S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNG-MFFIETSAKTADNINQLFE 189
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E Y+ L PL YRGA V ++ ++ W+ EL +H +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFD 171
E R+ + T G EL + G ++E S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNG-MFFIETSAKTADNINQLFE 189
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+C+L+ +T F + T+ F A +V VDG + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGT 118
DTAGQE + + YRGA + +++ W+ + R +A P + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMSIMLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
K DL R ++ +G++ K G ++LE S++T QNV+ F +L
Sbjct: 120 KCDLAHKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQNVEEAFIETAAKIL 168
Query: 179 Q 179
Q
Sbjct: 169 Q 169
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + +V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
E ++ A P ++G+ L G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + +V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
E ++ A P ++G+ L G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + +V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
E ++ A P ++G+ L G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS A K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGT 118
DTAGQE + + YRGA + +++ W+ + R +A + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL R ++T +GE+ K G +++E S+KT QNV+ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKEHG-LIFMEASAKTAQNVEEAF 160
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
E ++ A P ++G+ L G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGIK-FFETSAKTNLNVEEVFFSIAKDIKQ 179
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 4 ARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTA 62
A+F K V +GD +VGKT ++ + + F T Y PT+ D S + ++ TV L LWDTA
Sbjct: 8 AKF-KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 63 GQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHY--APTVPIVLVGTKL 120
GQE + L P R + V + N S KWI ++ V IVLVG K
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTS-KWIEDVHRERGQSNVIIVLVGNKT 125
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
DL E RQ ++ ++GE+ K G +++E S+K N+KA+F
Sbjct: 126 DLVEKRQ----------VSISEGEDKGKEYG-VMFIETSAKENFNIKALF 164
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDL 122
E + L YRGA + N+S W E+ Y+ + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
+R ++ +G + + G ++LECS+KT+ NV+ F+ + +L+
Sbjct: 132 ESER----------AVSKKEGIDFAREYG-CLFLECSAKTRVNVEQCFEELVLKILE 177
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDL 122
E + L YRGA + N+S W E+ Y+ + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
+R ++ +G + + G ++LECS+KT+ NV+ F+ + +L+
Sbjct: 132 ESER----------AVSKKEGIDFAREYG-CLFLECSAKTRVNVEQCFEELVLKILE 177
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDL 122
E + L YRGA + N+S W E+ Y+ + LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
+R ++ +G + + G ++LECS+KT+ NV+ F+ + +L+
Sbjct: 132 ESER----------AVSKKEGIDFAREYG-CLFLECSAKTRVNVEQCFEELVLKILE 177
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ ++ +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
E+R A P TA+ IG ++E S+K NV+ F A
Sbjct: 127 ENR--------AIPYETAKA--FADEIGIP-FMETSAKDATNVEQAFMA 164
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F D PT+ +F+ NV V T+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHY-APTVPIVLVGTKLDLR 123
E + + YRGA ++NI +KW+ ELR + +P +VLVG K DL
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNKSDLG 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAI 174
+ R+ + +G+ L ++ G +LE S+ QNV+ F + I
Sbjct: 132 QSRE----------VEEEEGKTLAESEG-LYFLETSALENQNVEEAFLSMI 171
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F D PT+ F+ NV V + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLR 123
E + + YRGA ++NI KKW+ ELR +A P +VLVG K DLR
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNKSDLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+ R+ + +G+ L ++ G +LE S+ NV+ F
Sbjct: 132 QSRE----------VEEDEGKTLAESEG-LYFLETSALENVNVEEAF 167
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLW 59
MS A K + +GD VGK+C+L+ +T F + T+ F A + +D + L +W
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGT 118
DTAGQE + + YRG + +++ W+ E R H + + +L+G
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLA-SWLEEARQHASENMTTMLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL + R ++T +GE+ + G +++E S+KT NV+ F
Sbjct: 120 KCDLEDKR----------TVSTEEGEQFAREHG-LIFMEASAKTAHNVEEAF 160
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA +EN+S +W+ ELR +A + + I+L+G K DL+
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHADSNIVIMLIGNKTDLK 130
Query: 124 -------EDRQYLIDHPGATPITTAQGEELK-----KAIGAAVYLECSSKTQQNVKAVFD 171
ED Q + G + I T+ E L + I + VY S K+ + + +
Sbjct: 131 HLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTAN 190
Query: 172 AAIK 175
A IK
Sbjct: 191 ANIK 194
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRH-YAPTVPIVLVGTKLDLRED 125
+ L P R + V + N S KWI E+R+ A V IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNTS-KWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ ++ +G+ + G +++E S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDSKGREYG-VMFIETSAKAGFNIKPLF 163
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDLRE 124
+ L YRGA + N+ W E+ Y+ V LVG K+D
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRES 133
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA-AIKVV 177
+R ++ +G L K + ++LECS++T+QNV+ F+ A+K++
Sbjct: 134 ER----------GVSREEGIALAKELN-CMFLECSARTRQNVEQCFEELALKIM 176
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD +VGK+C+L+ + + + Y+ T+ +F + DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA +V +L+G K D+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLIGNKNDMV 126
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E + ++T G L +G +LE S+K NV+ F
Sbjct: 127 ESK----------VVSTETGRALADELGIP-FLETSAKDSINVEQAF 162
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F + T+ F + ++++DG V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E + + YRGA +EN+ +W+ EL H TV +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVG-RWLDELNTHSDTTVAKMLIGNKCDLE 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVV 177
R ++ +G+ L ++ G ++E S+ NVK F+ I+ +
Sbjct: 131 SIR----------AVSVEEGKSLAESEG-LFFMETSALDSTNVKTAFEMVIREI 173
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V + N + KWI E+R V +VLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ I+ A+ EL +++E S+K N+KA+F
Sbjct: 130 RQVSIEEA------EAKARELN-----VMFIETSAKAGFNIKALF 163
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VDG V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ +W+ EL+ H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENVD-RWLKELKNHTDPNIVVMLVGNKSDLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+L+ P + A+ E L ++E S+ NV+ F
Sbjct: 132 ----HLLAVPTEDGKSYAEQESL-------CFMETSALEATNVEDAF 167
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + W+ + +H + +V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
E ++ A P T++G+ L G + E S+KT QNV+ VF + K + Q
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNQNVEQVFLSIAKDIKQ 179
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA +E +KKW+ EL+ P + + L G K DL +
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDA 130
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ +A+ E+ + ++E S+KT NVK +F
Sbjct: 131 RK-----------VSAEEAEIYAQENSLFFMETSAKTATNVKDIF 164
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLT 126
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF---DAAIKVVL 178
+ ++T + +G +LE S+K NV+ F AAIK +
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMAMTAAIKTRM 173
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V VD + LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H V I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNKADLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
H A P A+ ++ + ++E S+ NV+ F
Sbjct: 132 --------HLRAVPTEEARSFSERENM---FFMETSALDATNVEQAF 167
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKNDLT 126
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF---DAAIKVVL 178
+ ++T + +G +LE S+K NV+ F AAIK +
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMAMTAAIKTRM 173
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MST R +K + +GD VGKT ++ Y +N F Y T+ +F + + +D V L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAP----TVP 112
+WDTAGQE + L YRGAD +E++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLD-NWHNEFLTRASPRDPMAFP 119
Query: 113 IVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
+L+G K+D ID + ++ + E G VY E S+K NV F
Sbjct: 120 FILLGNKVD--------IDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLC 171
Query: 173 AIKVVL 178
K+ L
Sbjct: 172 ITKLAL 177
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V + N S KWI ++R V IVLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTS-KWIEDVRTERGSDVIIVLVGNKTDLVDK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ ++ +G+ + G +++E S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDNKARDYG-VIFIETSAKAGFNIKPLF 163
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD VGKT ++ + F T Y T+ D S + T L LWDTAGQE
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V + N S KWI E+R V IVLVG K DL
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ ++ +GE + G A+++E S+K N+K +F
Sbjct: 128 RQ----------VSIEEGENKAREFG-ALFMETSAKAGFNIKPLF 161
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA +E +KKW+ EL+ P + + L G K DL +
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ TA+ + ++E S+KT NVK +F
Sbjct: 131 RK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + W+ + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
E ++ A P TA+G+ L G + E S+KT NV+ VF + K + Q
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVENVFMSIAKDIKQ 179
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65
K V +GD AVGKT +L + N F D T+ F + +V+D TV +WDTAGQE
Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQE 75
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRE 124
Y + YRGA +++++ KW+ ELR H + I+L+G K DL
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-KWLEELRGHADKNIVIMLIGNKCDLGS 134
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R A P AQ ++ + ++E S+ NV+ F
Sbjct: 135 LR--------AVPTEDAQEFAQRENL---FFMETSALEATNVETAF 169
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F T+ F + N+ ++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E + + YRGA +E++ +W+ EL+ H TV +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESVG-RWLDELKTHSDTTVARMLVGNKCDLE 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIK 175
R ++ +G+ L + G ++E S+ NVK F+ I+
Sbjct: 131 SIR----------AVSVEEGKALAETEG-LFFMETSALDSTNVKTAFEMVIR 171
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
Y + YRGA +EN+ ++W+ ELR H + I+LVG K DLR
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNKADLRHL 133
Query: 126 R 126
R
Sbjct: 134 R 134
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN + +W+ ELR H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ + W+ ELR H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+L+ + A+ E L ++E S+ NV+ F
Sbjct: 132 ----HLVAVQTEDAKSFAEKESL-------YFMETSALEATNVENAF 167
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F + T+ F + ++ ++G V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E + + YRGA +E++ +W+ EL+ H TV +LVG K DL
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVG-RWLDELKIHSDTTVARMLVGNKCDLE 173
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAI 174
R ++ +G+ L + G ++E S+ NVK F+ I
Sbjct: 174 NIR----------AVSVEEGKALAEEEG-LFFVETSALDSTNVKTAFEMVI 213
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+ + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNKSDLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+L+ + A+ E L ++E S+ NV+ F
Sbjct: 132 ----HLVAVQTEDAKSFAENESL-------YFMETSALESTNVENAF 167
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L + + F + T+ F + ++G + +WDTAGQ
Sbjct: 14 LFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E + + YRGA + +I +W+ EL H V +LVG K DL+
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSIG-RWLNELHTHSDMNVVTILVGNKSDLK 132
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVV 177
+ R+ ++TA+G+ L +A G ++E S+ NV A F+ +K +
Sbjct: 133 DLRE----------VSTAEGKALAEAQG-LFFMETSALDSSNVAAAFETVVKEI 175
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGKT +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA ++N+ +W+ ELR +A + + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKADLN 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAI 174
R + G+ L + G + +LE S+ NV+ F +
Sbjct: 131 HLR----------SVAEEDGQTLAETEGLS-FLETSALEATNVEKAFQTVL 170
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K V +GD AVGK+ +L Y + F D T+ F +V+D +V +WDTAGQE
Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRE 124
Y + YRGA +++I +W+ ELR H + I+L+G K DL +
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITRRQTFDHIP-RWLEELRAHADKNIVIILIGNKSDLVD 136
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R I T +E + G +LE S+ NV++ F
Sbjct: 137 QR----------AIPTEDAKEFAEKEG-LFFLETSAFNATNVESAF 171
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H + I+ VG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNKADLR 131
Query: 124 EDR 126
R
Sbjct: 132 HLR 134
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ +L +T N F D T+ F+ ++ D V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H + I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
Query: 124 EDR 126
R
Sbjct: 132 HLR 134
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA +EN+ +W+ ELR +A + + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENV-LRWLRELRDHADSNIVIMMAGNKSDLN 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R + G L + G + +LE S+ N++ F
Sbjct: 131 HLR----------SVADEDGRSLAEKEGLS-FLETSALEATNIEKAF 166
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F T+ T+ F +V ++G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E + + YRGA +E++ K+W+ EL + T V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNKCDLE 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
+ R ++ +G+ L + G ++E S+ NV F+ I+ +
Sbjct: 131 DIR----------AVSVEEGKALAEEEG-LFFMETSALDATNVDKAFEIVIREIF 174
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT ++ + + F Y T+ +F + V +D L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VP 112
+WDTAGQE + L YRGAD +EN++ W E L +P+ P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLN-NWREEFLIQASPSDPENFP 119
Query: 113 IVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
V++G K D +D + +T + + + G Y E S+K NV A F+
Sbjct: 120 FVVLGNKTD--------VDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFEC 171
Query: 173 AIKVVLQ 179
K L+
Sbjct: 172 IAKNALK 178
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQE 65
K V +GD AVGK+ +L + + F D T+ F + ++ ++ +WDTAGQE
Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRE 124
Y + YRGA +E+I +W+ ELR H + I+L+G K DL +
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDMTKRETFEHIP-RWLEELRAHADKNIVIILIGNKSDLED 136
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFD 171
R A P A+ K+ + +LE S+ NV+ F+
Sbjct: 137 QR--------AVPTEDAKEFAEKEGL---FFLETSALNATNVENSFN 172
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA ++N+ +W+ ELR +A + + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNV-LRWLRELRDHADSNIVIMMAGNKSDLN 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R + G+ L + G + +LE S+ NV+ F
Sbjct: 131 HLR----------SVAEEDGQSLAEKEGLS-FLETSALEATNVEKAF 166
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VPIVLVGTK 119
E + L YRGAD +EN++ W E L +P+ P VL+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFENLN-NWREEFLIQASPSDPENFPFVLIGNK 126
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
+D+ + ++ A ++G Y E S+K NV+ F K L+
Sbjct: 127 VDVDDGNSRVVSEKKAKAWCASKGN--------IPYFETSAKVGTNVEEAFQCIAKDALK 178
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ +L +T N F D T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H I+LVG K DL
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADLN 131
Query: 124 EDR 126
R
Sbjct: 132 HLR 134
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + +D +V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP----TVPIVLVGTKL 120
E + L YRGAD +E ++ L+ P T P VL+G K
Sbjct: 69 ERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKT 128
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
D +D + ++ + E + G Y E S+K N+ F + + L
Sbjct: 129 D--------VDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIAL 178
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLW------- 59
K V +GD VGKT ++ + F T Y T+ D S + T L LW
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLG 68
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGT 118
DTAGQE + L P R + V + N S KWI E+R V IVLVG
Sbjct: 69 DTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGN 127
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL RQ ++ +GE + G A+++E S+K N+K +F
Sbjct: 128 KTDLVNKRQ----------VSIEEGENKAREFG-ALFMETSAKAGFNIKPLF 168
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65
K V +GD AVGKT +L +T N F D T+ F + + + G V +WDTAGQE
Sbjct: 29 FKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQE 88
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDL 122
Y + YRGA +++++ +W+ ELR H + I+LVG K DL
Sbjct: 89 RYRAVTSAYYRGALGAMVVYDITKRLSFDHVA-RWVEELRAHADDSAVIMLVGNKADL 145
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQE 65
K V +GD AVGK+ +L ++ N F + T+ F + +D T+ +WDTAGQE
Sbjct: 16 FKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQE 75
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDL 122
Y + YRGA +++++ +W+ ELR H + I+L+G K DL
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHADKNIVIMLIGNKTDL 132
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D |
chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS+ R +K + +GD VGKT ++ + + F Y T+ +F + V +D L
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VP 112
+WDTAGQE + L YRGAD ++N++ W E L +P+ P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLN-NWREEFLIQASPSDPENFP 119
Query: 113 IVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
V++G K D+ + ++ A ++G Y E S+K NV A F+
Sbjct: 120 FVVLGNKTDVDGGKSRVVSEKKAKAWCASKGN--------IPYFETSAKEGFNVDAAFEC 171
Query: 173 AIK 175
K
Sbjct: 172 ITK 174
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M+T R +K + +GD VGKT ++ Y F Y T+ +F + + + V L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAP----TVP 112
+WDTAGQE + L YRGAD ++N+ + W E L+ +P T P
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDPKTFP 119
Query: 113 IVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
+++G K+D +D + ++ + + + G Y E S+K NV F
Sbjct: 120 FIVLGNKID--------VDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLT 171
Query: 173 AIKVVL 178
K L
Sbjct: 172 IAKTAL 177
>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 3 TARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
+ + ++ V VGD GK+ ++++ +++FP + VP V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 63 GQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDL 122
+ + + + AD E +S+ W+PELR +PI++ G KLD
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDF 132
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
R+D + +PI Q E++ I ECS+ Q + VF A K VL
Sbjct: 133 RDDNNQVSLEQVMSPIMQ-QFREIETCI------ECSALKQLQAQEVFYYAQKTVLH 182
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 3 TARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
+ + ++ V VGD GK+ ++++ +++FP + VP V ++ + + + + DT+
Sbjct: 14 SPKSVRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTS 72
Query: 63 GQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDL 122
+ + + + AD E +S+ W+PELR +PI++ G KLD
Sbjct: 73 SRPEDRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDF 132
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
R+D + +PI Q E++ I ECS+ Q + VF A K VL
Sbjct: 133 RDDNNQVSLEQVMSPIMQ-QFREIETCI------ECSALKQLQAQEVFYYAQKTVLH 182
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M+T R +K + +GD VGKT ++ Y F Y T+ +F + + + V L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA--------- 108
+WDTAGQE + L YRGAD ++N+ + W E A
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMCPSD 119
Query: 109 -PTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVK 167
T P +++G K+D +D + ++ + + + G Y E S+K NV
Sbjct: 120 PKTFPFIVLGNKID--------VDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVD 171
Query: 168 AVFDAAIKVVL 178
F K L
Sbjct: 172 EAFLTIAKTAL 182
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRH 106
V VDG + L +WDTAGQE + + YRGA + +++ W+ + R
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQ 60
Query: 107 YA-PTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQN 165
+A P + I+L+G K DL R ++ +G++ K G ++LE S++T QN
Sbjct: 61 HANPNMSIMLIGNKCDLAHKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQN 109
Query: 166 VKAVFDAAIKVVLQ 179
V+ F +LQ
Sbjct: 110 VEEAFIETAAKILQ 123
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VPIVLVGTK 119
E + L YRGAD +E+++ W E L +P+ P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLN-NWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+D +D + ++ + + G Y E S+K NV+ F
Sbjct: 127 ID--------VDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VPIVLVGTK 119
E + L YRGAD +E+++ W E L +P+ P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLN-NWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+D +D + ++ + + G Y E S+K NV+ F
Sbjct: 127 ID--------VDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 28/197 (14%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M+T R +K + +GD VGKT ++ Y F Y T+ +F + + + V L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA--------- 108
+WDTAGQE + L YRGAD ++N+ + W E A
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMWTIA 119
Query: 109 -------PTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSK 161
T P +++G K+D +D + ++ + + + G Y E S+K
Sbjct: 120 EASPSDPKTFPFIVLGNKID--------VDGGSSRVVSDKKAADWCASNGNIPYFETSAK 171
Query: 162 TQQNVKAVFDAAIKVVL 178
NV F K L
Sbjct: 172 DDFNVDEAFLTIAKTAL 188
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
chr3:23329200-23332692 REVERSE LENGTH=643
Length = 643
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 10/174 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ GD GK+ ++ + S TFP D VP V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 67 YNRLRPLS-YRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
NR++ + +R ADV + +S W+PELR P+++VG KLDLR++
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDE 132
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
R +PI +K+ +ECS+ T V VF A K VL
Sbjct: 133 RSPARLEDIMSPI-------MKEYREIETCIECSALTLIQVPDVFYFASKAVLH 179
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 14 FKILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDLR 123
+ L +RG+ + N++ W E+ Y+ + LVG K+D
Sbjct: 73 KFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRE 132
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA-AIKVV 177
+R+ ++ +G L K + ++ ECS++T++NV F+ A+K++
Sbjct: 133 SERK----------VSREEGMALAKDLN-CLFHECSARTRENVNGCFEELALKIM 176
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 14 FKILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDLR 123
+ L +RG+ + N++ W E+ Y+ + LVG K+D
Sbjct: 73 KFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRE 132
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA-AIKVV 177
+R+ ++ +G L K + ++ ECS++T++NV F+ A+K++
Sbjct: 133 SERK----------VSREEGMALAKDLN-CLFHECSARTRENVNGCFEELALKIM 176
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 14 FKILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQE 72
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDLR 123
+ L +RG+ + N++ W E+ Y+ + LVG K+D
Sbjct: 73 KFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRE 132
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA-AIKVV 177
+R+ ++ +G L K + ++ ECS++T++NV F+ A+K++
Sbjct: 133 SERK----------VSREEGMALAKDLN-CLFHECSARTRENVNGCFEELALKIM 176
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K + VGDG GKT L + + F + PT+ D + + + + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDL 122
Y+ L+ Y Y NI + W +LR +PIVL G K+D+
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDR-WYRDLRRVCKNIPIVLCGNKVDV 129
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
+K + +GD VGKT +L Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISK---KWIPELRHYAPT-VPIVLVGTKLD 121
+ L YR D +E+I ++I + PT P VL+G K D
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 122 LREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+ + ++ A ++G VY E S+K + NV+ F
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGN--------IVYFETSAKAKINVEEAF 166
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-R 105
V +DG + L +WDTAGQE + + YRGA + NI + W+ + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 106 HYAPTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQN 165
H + V +LVG K D+ E ++ A P TA+G+ L G + E S+KT N
Sbjct: 106 HASDNVNKILVGNKADMDESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLN 155
Query: 166 VKAVFDAAIKVVLQ 179
V+ VF + K + Q
Sbjct: 156 VENVFMSIAKDIKQ 169
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
+ LR Y Y+N+ W +L +PIVL G K+D++ +
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVK-N 131
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ A +T + + L+ Y E S+K+ N + F
Sbjct: 132 RQV-----KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
+ LR Y Y+N+ W +L +PIVL G K+D++ +
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVK-N 131
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ A +T + + L+ Y E S+K+ N + F
Sbjct: 132 RQV-----KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
+ LR Y Y+N+ W +L +PIVL G K+D++ +
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVK-N 131
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ A +T + + L+ Y E S+K+ N + F
Sbjct: 132 RQV-----KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133405-6134959 FORWARD LENGTH=172
Length = 172
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAP--- 109
V L +WDTAGQE + L YRGAD ++N+ + W E L+ +P
Sbjct: 23 VTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDP 81
Query: 110 -TVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKA 168
T P +++G K+D +D + ++ + + + G Y E S+K NV
Sbjct: 82 KTFPFIVLGNKID--------VDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDE 133
Query: 169 VFDAAIKVVL 178
F K L
Sbjct: 134 AFLTIAKTAL 143