Miyakogusa Predicted Gene
- Lj3g3v2838450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2838450.1 gi|1370157|emb|Z73957.1|.path1.1
(93 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 155 7e-39
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 153 3e-38
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 144 1e-35
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 139 5e-34
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 135 4e-33
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 124 9e-30
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 118 8e-28
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 114 2e-26
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 111 1e-25
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 99 6e-22
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 96 4e-21
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 95 9e-21
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 95 9e-21
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 87 2e-18
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 85 1e-17
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 83 4e-17
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 82 9e-17
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 81 1e-16
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 80 4e-16
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 74 3e-14
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 72 6e-14
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 72 9e-14
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 69 7e-13
AT5G46025.1 | Symbols: | Ras-related small GTP-binding family p... 68 1e-12
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 66 5e-12
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 66 5e-12
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 62 8e-11
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 62 9e-11
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 59 7e-10
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 59 9e-10
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 57 2e-09
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 57 2e-09
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 56 5e-09
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 54 2e-08
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 54 3e-08
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 51 2e-07
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 50 4e-07
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 49 6e-07
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 49 6e-07
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 49 6e-07
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 49 6e-07
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 49 7e-07
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 48 2e-06
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 48 2e-06
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 48 2e-06
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 47 2e-06
AT4G08190.1 | Symbols: | P-loop containing nucleoside triphosph... 46 4e-06
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 46 5e-06
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 155 bits (391), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 83/95 (87%), Gaps = 3/95 (3%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
M VGNKADLRHLRAV TE+A AFAERENT+FMETSALES+NV+NAF EVLS+IY VVSRK
Sbjct: 122 MFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRK 181
Query: 61 TLEKGNDPGALPQGQTINLG---DVSAVKKPGCCS 92
L+ G+DP ALP+GQTIN+G DVSAVKK GCCS
Sbjct: 182 ALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCS 216
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 153 bits (386), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 85/97 (87%), Gaps = 4/97 (4%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNKADLRHLRA+ TEEA AFAERENT+FMETSALE++NVDNAF EVL++IY VVS+K
Sbjct: 122 MLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKK 181
Query: 61 TLEKGNDP-GALPQGQTINLG---DVSAVKKPGCCSA 93
LE G+DP ALP+GQ IN+G D+SAVKKPGCCSA
Sbjct: 182 ALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 144 bits (362), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 81/96 (84%), Gaps = 3/96 (3%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNKADLRHLRAV TE+A AFAERENT+FMETSALE+LNV+NAF EVLS+IY V S+K
Sbjct: 122 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKK 181
Query: 61 TLEKGNDPGALPQGQTINLG---DVSAVKKPGCCSA 93
L+ G+D LP+GQ+IN+G DVS VKK GCCS+
Sbjct: 182 ALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 139 bits (349), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 80/96 (83%), Gaps = 4/96 (4%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNKADL HLRA+ TEE FAERENT+FMETSALE++NV+NAF EVL++IY VVS+K
Sbjct: 122 MLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKK 181
Query: 61 TLEKGNDP-GALPQGQTINLG---DVSAVKKPGCCS 92
L+ G+DP ALP+GQ IN+G DVSAVKK GCC+
Sbjct: 182 ALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCA 217
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 78/96 (81%), Gaps = 3/96 (3%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNKADLRHLRAVPTEEA +F+EREN +FMETSAL++ NV+ AF VL++IY V+SRK
Sbjct: 122 MLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRK 181
Query: 61 TLEKGNDPGALPQGQTINLG---DVSAVKKPGCCSA 93
L+ DP +LP+GQTI++G DV+AVK GCCS
Sbjct: 182 ALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCSG 217
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 124 bits (312), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 77/93 (82%), Gaps = 2/93 (2%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNK+DLRHL AV TE+A +FAE E+ YFMETSALES NV+NAF EVL++IY+VVS+K
Sbjct: 122 MLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKK 181
Query: 61 TLEKGNDPGALP-QGQTINLGDVSAVKKPGCCS 92
+E G D G +P +G+ I++ DVSAVKK GCCS
Sbjct: 182 AMEAGEDSGNVPSKGEKIDV-DVSAVKKTGCCS 213
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 118 bits (295), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 77/94 (81%), Gaps = 2/94 (2%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNK+DLRHL AV TE+A +FAE+E+ YFMETSALE+ NV+NAF EVL++I+++VS+K
Sbjct: 122 MLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKK 181
Query: 61 TLEKGNDPGALP-QGQTINLG-DVSAVKKPGCCS 92
+E ++ +P +G I++G DVSAVKK GCCS
Sbjct: 182 AMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 75/94 (79%), Gaps = 2/94 (2%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DLRHL AV TEEA AFAERE+ YFMETSAL++ NV+NAF EVL++I+ +VS++
Sbjct: 122 MLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKR 181
Query: 61 TLEKGNDPGALP-QGQTINLG-DVSAVKKPGCCS 92
+++ G + LP +G+TIN+ D S +K+ GCCS
Sbjct: 182 SVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 74/94 (78%), Gaps = 2/94 (2%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNK+DLRHL AVPTE+ ++AE+E+ FMETSALE+ NV++AF EVL++IY + S+K
Sbjct: 122 MLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKK 181
Query: 61 TLEKGNDPGA-LPQGQTINL-GDVSAVKKPGCCS 92
+E G D A +P+G+ I + DVSA+KK GCCS
Sbjct: 182 QVEAGEDGNASVPKGEKIEVKNDVSALKKLGCCS 215
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
M+ GNK+DL HLR+V E+ + AE+E F+ETSALE+ N++ AF +LSEIY+++S+K
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180
Query: 61 TLEKGNDPGALP-QGQTINLGDVSAVKKPGCCS 92
L G LP QG IN+ D SA + GCCS
Sbjct: 181 ALAAQEAAGNLPGQGTAINISDSSATNRKGCCS 213
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 95.9 bits (237), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 6/97 (6%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL LRAVPTE+A FA+REN +FMETSAL+S NV+ +F+ VL+EIY +VS+K
Sbjct: 124 MLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKK 183
Query: 61 TL------EKGNDPGALPQGQTINLGDVSAVKKPGCC 91
L E G D L + + G+ + K GCC
Sbjct: 184 NLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 5/96 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL LRAVPTE+A FA+REN +FMETSALE+ NV+ AF+ +L+EIY ++S+K
Sbjct: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKK 183
Query: 61 TLEKGNDPG----ALPQGQTINL-GDVSAVKKPGCC 91
+L +D +L +G I + + + K+ GCC
Sbjct: 184 SLTADDDDADGNSSLLKGTRIIIPSEQESGKRGGCC 219
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 94.7 bits (234), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 70/97 (72%), Gaps = 5/97 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL+HLRAV TE+A ++AE+E F+ETSALE+LNV+ AF +LSE+Y ++S+K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180
Query: 61 TL--EKGNDPGALPQGQTINLGDVSA--VKKPGCCSA 93
++ ++ + +GQTI++ S KKP CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKP-CCSS 216
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
M+ GNKADL HLR+V E+ AE E F+ETSALE+ NV+ AF VL+EIY+++S+K
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
Query: 61 TLEKGND-------PGALPQGQTINLGDVSAVKKPGCCS 92
L PG QG TIN+ D S K GCCS
Sbjct: 181 ALAAQEAAAANSAIPG---QGTTINVEDTSGAGKRGCCS 216
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
M+ GNK+DL HLR+V E+ + AE+E F+ETSALE+ NV+ AF +L EIY+++S+K
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
Query: 61 TLEKGND-------PGALPQGQTINLGDVSAVKKPGCCSA 93
L PG QG TIN+ D S K CCS+
Sbjct: 181 ALAAQEAAAANSAIPG---QGTTINVDDTSGGAKRACCSS 217
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+LVGNK+DL+ LR V T E A AE + +FMETSAL+S NV AF V+ EIYN++SRK
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
Query: 61 TLEK----GNDPGALPQGQTINL--GDVSAVKKPGCCSA 93
+ DP +L G+ + + KK GCCS+
Sbjct: 183 VMSSQELNKQDPASLSNGKKVVIPSDGQGEFKKGGCCSS 221
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 12/103 (11%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+L+GNK+DL RA+PTE+A FAE+E +F+ETSA + NV++AF VL+EI+N+V++K
Sbjct: 126 ILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKK 185
Query: 61 TL------EKGNDPGALPQGQTINL----GDVSAVKKPGCCSA 93
+L E GN PG+L G+ I++ G V K CC++
Sbjct: 186 SLAASEDQENGN-PGSLA-GKKIDIVPGPGQVIPNKSNMCCNS 226
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+L+GNK+DL RAVPTE+A FAE+E +F+ETSAL + NV+N+F ++++IYN V++K
Sbjct: 126 ILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKK 185
Query: 61 TLEK---GNDPGALPQGQTINLGDVSAV--KKPGCCSA 93
L N+PG+L + + G + K CC++
Sbjct: 186 NLASEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTS 223
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNK DL +RAV EE A AE E +FMETSAL++ NVD AF V+ EI+N VSRK
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180
Query: 61 TLEKGNDPGALPQGQTINL-----GDVSAVKKPGCCS 92
L L + ++L G S+ + P CCS
Sbjct: 181 LLNSDAYKAELSVNR-VSLVNNQDGSESSWRNPSCCS 216
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNK DL ++RAV EE A AE E +F+ETSAL+S NV AF V+ +IYN VSRK
Sbjct: 164 MLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 223
Query: 61 TLEKGNDPGALPQGQTINLGDVSAVKKP----GCCSA 93
L L + + D ++ K CCS+
Sbjct: 224 QLNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCSS 260
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
MLVGNK DL +RAV EE A AE E +FMETSAL+S NV AF V+ +IY +SRK
Sbjct: 121 MLVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRK 180
Query: 61 TLEKGNDPGALPQGQTINL---GDVSAVKKPG--CCSA 93
L L ++L + S+ + G CCS+
Sbjct: 181 QLNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 13/99 (13%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL +RAV EE + AE E +FMETSAL+S NV AF V+ EIY+ +SRK
Sbjct: 121 MLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRK 180
Query: 61 TLEKGNDPGALPQGQTINLGDVSAVKKP-------GCCS 92
L + + + T+N VS VK CCS
Sbjct: 181 QL----NSDSYKEELTVN--RVSLVKNENEGTKTFSCCS 213
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 1 MLVGNKADLR-HLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYN--VV 57
MLVGNKADL RAVPTE+A FAE + +F E SAL NVD AF +L EI++ VV
Sbjct: 137 MLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVV 196
Query: 58 SRKTLEKGNDPGALPQGQTINLG-----DVSAVKKPGCCS 92
SRK +E G I++ + S +K+ CS
Sbjct: 197 SRKAMESDGGATVKLDGSRIDVISGSDLETSNIKEQASCS 236
>AT5G46025.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:18665255-18665596 REVERSE LENGTH=113
Length = 113
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVS 58
MLVGNK+DL H R V EEA +FAE+E F+ETSAL++ NV+ F VL++IYN V+
Sbjct: 54 MLVGNKSDLDHRREVSMEEAKSFAEKEKLLFIETSALDATNVEECFTNVLTQIYNDVT 111
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL R V TEE FA FME SA + NV+ AF+E + IY +
Sbjct: 115 MLIGNKCDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDG 174
Query: 61 TLEKGNDPGALPQGQTINLGDVSAVKKPGCC 91
+++ N+PG P G S+ ++ GCC
Sbjct: 175 VVDEANEPGITP-GPFGGKDASSSQQRRGCC 204
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+LVGNK+DLR R V +E AE E YF+ETSALE++NV+ AF+ ++ I+ VV+++
Sbjct: 122 VLVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR 181
Query: 61 TLEKGNDPGA-------------LPQGQTI-NLGDVSAVK-----KPGCC 91
+ GA LP G+ I N+ +V+A + CC
Sbjct: 182 IASENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 15/106 (14%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+LVGNK+DL R V EE AE E YF+ETSALE+ NV+ AF+ ++ I+ V+++K
Sbjct: 122 VLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
Query: 61 TL------EKGNDP--GAL--PQGQTINLGDVSAVKK-----PGCC 91
+ GN+ GA+ P + +N+ +V+A + CC
Sbjct: 182 IVLDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCC 227
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL H RAV TEE FA+ FME SA + NV+ AFI+ + IY +
Sbjct: 115 MLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDG 174
Query: 61 TLEKGNDPGALPQGQTINLG-----DVSAVKKPGCC 91
+ N+ + G G D S + GCC
Sbjct: 175 VFDVSNESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL H RAV EE FA+ F+E SA + NV+ AFIE ++I +
Sbjct: 69 MLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDG 128
Query: 61 TLEKGNDPGALPQGQTINLG-----DVSAVKKPGCC 91
+ N+ + G G D + + GCC
Sbjct: 129 VFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
ML+GNK DL H RAV EE FA+ F+E SA + NV+ AFIE ++I +
Sbjct: 115 MLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDG 174
Query: 61 TLEKGNDPGALPQGQTINLG-----DVSAVKKPGCC 91
+ N+ + G G D + + GCC
Sbjct: 175 VFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVPT + A A+ F ETSA +LNV+N F+ + +I ++
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTE 183
Query: 60 KTLEKGNDPGALPQGQTINLGDVSA----VKKPGCCS 92
D A PQG I D +A +K CCS
Sbjct: 184 ------TDTKAEPQGIKITKQDTAASSSTAEKSACCS 214
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVPT + A A+ F ETSA +LNV+N F+ + +I ++
Sbjct: 114 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTE 173
Query: 60 KTLEKGNDPGALPQGQTINLGDVSA----VKKPGCCS 92
D A PQG I D +A +K CCS
Sbjct: 174 ------TDTKAEPQGIKITKQDTAASSSTAEKSACCS 204
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIY-NVVSR 59
+LVGNK+DL RA+P E A AFA+ FMETSA ++ NV+ AF+ + + I + S+
Sbjct: 117 LLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQ 176
Query: 60 KTLEKGNDPGALPQGQTINLGDVSAVKKPGCCS 92
P +GQ + +K GCCS
Sbjct: 177 PAGNNARPPTVQIRGQPV-------AQKNGCCS 202
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+LVGNK DL + V TE A AFA+ F+ETSA + NV+ AF+ + + I ++ +
Sbjct: 117 LLVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQ 176
Query: 61 TLEKGNDPGALPQGQTINLGDVSAVKKPGCCSA 93
P +GQ +N ++ GCCS+
Sbjct: 177 PAGGSKPPTVQIRGQPVN-------QQSGCCSS 202
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+LVGNK DL + V TE A AFA+ F+ETSA + NV+ AF+ + + I ++ +
Sbjct: 117 LLVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQ 176
Query: 61 TLEKGNDPGALPQGQTINLGDVSAVKKPGCCSA 93
P +GQ +N ++ GCCS+
Sbjct: 177 PAGGAKPPTVQIRGQPVN-------QQSGCCSS 202
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVPT + A A+ F ETSA + NV+ F+ + +I ++
Sbjct: 124 ILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTE 183
Query: 60 KTLEKGNDPGALPQGQTINLGDV------SAVKKPGCCS 92
+D A PQG I D S +K CCS
Sbjct: 184 ------SDTKAEPQGIKITKQDANKASSSSTNEKSACCS 216
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 60
+L+GNK D+ + V TE A A+ F+ETSA +S+NV+ AF+ + EI + +
Sbjct: 117 LLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQ 176
Query: 61 T-LEKGNDPGALP-QGQTINLGDVSAVKKPGCC 91
T K + PG + +GQ I + GCC
Sbjct: 177 TNANKTSGPGTVQMKGQPIQQNN------GGCC 203
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 2 LVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEV 49
LVGNKADL R VPTE+ AE+ +F+ETSA + N++ F E+
Sbjct: 144 LVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEI 191
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVP + A A+ F ETSA +LNV+ F + +I ++
Sbjct: 124 ILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLA- 182
Query: 60 KTLEKGNDPGALPQGQTINLGD-----VSAVKKPGCC 91
D A PQ IN D A +K CC
Sbjct: 183 -----DTDARAEPQTIKINQSDQGAGTSQATQKSACC 214
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVP + A A+ F ETSA +LNV+ F + +I ++
Sbjct: 124 ILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLA- 182
Query: 60 KTLEKGNDPGALPQGQTINLGD-----VSAVKKPGCC 91
D A PQ IN D A +K CC
Sbjct: 183 -----DTDARAEPQTIKINQSDQGAGTSQATQKSACC 214
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVP + A A+ F ETSA +LNV+ F + +I ++
Sbjct: 124 ILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLA- 182
Query: 60 KTLEKGNDPGALPQGQTINLGD-----VSAVKKPGCC 91
D A PQ IN D A +K CC
Sbjct: 183 -----DTDARAEPQTIKINQSDQGAGTSQATQKSACC 214
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 2 LVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKT 61
L GNKADL R V EEA +A+ + +FMETSA + NV + F E+ + V
Sbjct: 120 LAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRV----- 174
Query: 62 LEKGNDPGALPQGQTINLGDVSAVKKPGCCS 92
P P G + G + CC+
Sbjct: 175 -----QPAENPTGMVLPNGPGATAVSSSCCA 200
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVPT + A A+ F ETSA +LNV+ F + +I +S
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLS- 182
Query: 60 KTLEKGNDPGALPQGQTIN-LGDVSAVKKPGCC 91
+ +P + QT G A +K CC
Sbjct: 183 -DTDSRAEPATIKISQTDQAAGAGQATQKSACC 214
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVPT + A A+ F ETSA +LNV+ F + +I +S
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLS- 182
Query: 60 KTLEKGNDPGALPQGQTIN-LGDVSAVKKPGCC 91
+ +P + QT G A +K CC
Sbjct: 183 -DTDSRAEPATIKISQTDQAAGAGQATQKSACC 214
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVPT + A A+ F ETSA +LNV+ F + +I +S
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLS- 182
Query: 60 KTLEKGNDPGALPQGQTIN-LGDVSAVKKPGCC 91
+ +P + QT G A +K CC
Sbjct: 183 -DTDSRAEPATIKISQTDQAAGAGQATQKSACC 214
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 2 LVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAF 46
LVGNKADL R VPTE+ AE+ +F+ETSA + N++ F
Sbjct: 144 LVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188
>AT4G08190.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:5174523-5175476
REVERSE LENGTH=127
Length = 127
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 1 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAF 46
M+ GNKADL HLR+V E+ + E+ F+ETSALE+ NV+ AF
Sbjct: 85 MMAGNKADLNHLRSVAEEDG---HKTESLSFLETSALEATNVEKAF 127
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 1 MLVGNKADL-RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSR 59
+LVGNKAD+ RAVP + A A+ F ETSA +LNV+ F + +I ++
Sbjct: 124 ILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLA- 182
Query: 60 KTLEKGNDPGALPQGQTIN-LGDVSAVKKPGCCSA 93
+ +P + QT G A +K CC +
Sbjct: 183 -DTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216