Miyakogusa Predicted Gene
- Lj3g3v2809230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2809230.1 Non Chatacterized Hit- tr|D5A892|D5A892_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,43.93,2e-18,seg,NULL; DUF1421,Protein of unknown function DUF1421;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.44731.1
(337 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G28300.1 | Symbols: | Protein of unknown function (DUF1421) ... 279 2e-75
AT4G28300.2 | Symbols: | Protein of unknown function (DUF1421) ... 213 1e-55
AT5G14540.1 | Symbols: | Protein of unknown function (DUF1421) ... 84 1e-16
AT3G01560.1 | Symbols: | Protein of unknown function (DUF1421) ... 75 6e-14
>AT4G28300.1 | Symbols: | Protein of unknown function (DUF1421) |
chr4:14014860-14016823 FORWARD LENGTH=496
Length = 496
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 173/222 (77%), Gaps = 8/222 (3%)
Query: 1 MASGPSGLSNCSSKGFDFRSDDVLCSYEDFTEQDSSNGNNIDPS-------KDFHISRMT 53
MASG SG N SKGFDF SDD+LCSY+D+T QDSSNG + DP+ K+FH +RM
Sbjct: 1 MASGSSGRVNSGSKGFDFGSDDILCSYDDYTNQDSSNGPHSDPAIAASNSNKEFHKTRMA 60
Query: 54 KAAALPATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKS 113
+++ P ++Y PE SL QD+ TVE+++K Y+DN+MRFLEG+ SRLSQLELYCYNLDK+
Sbjct: 61 RSSVFPTSSYSPPEDSLSQDITDTVERTMKMYADNMMRFLEGLSSRLSQLELYCYNLDKT 120
Query: 114 IGEMRSDLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE-S 172
IGEMRS+L HE+AD KL+S++KH+QEVHRSVQIL+DKQELAD QKELAKLQLVQKE S
Sbjct: 121 IGEMRSELTHAHEDADVKLRSLDKHLQEVHRSVQILRDKQELADTQKELAKLQLVQKESS 180
Query: 173 SPSRRQSYEGRSSPSATDQKRTDNASDTNNQQLALALPHQVA 214
S S Q E R + + K+++N SD +NQQLALALPHQ+A
Sbjct: 181 SSSHSQHGEDRVATPVPEPKKSENTSDAHNQQLALALPHQIA 222
>AT4G28300.2 | Symbols: | Protein of unknown function (DUF1421) |
chr4:14015414-14016823 FORWARD LENGTH=438
Length = 438
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 52 MTKAAALPATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLD 111
M +++ P ++Y PE SL QD+ TVE+++K Y+DN+MRFLEG+ SRLSQLELYCYNLD
Sbjct: 1 MARSSVFPTSSYSPPEDSLSQDITDTVERTMKMYADNMMRFLEGLSSRLSQLELYCYNLD 60
Query: 112 KSIGEMRSDLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
K+IGEMRS+L HE+AD KL+S++KH+QEVHRSVQIL+DKQELAD QKELAKLQLVQKE
Sbjct: 61 KTIGEMRSELTHAHEDADVKLRSLDKHLQEVHRSVQILRDKQELADTQKELAKLQLVQKE 120
Query: 172 -SSPSRRQSYEGRSSPSATDQKRTDNASDTNNQQLALALPHQVA 214
SS S Q E R + + K+++N SD +NQQLALALPHQ+A
Sbjct: 121 SSSSSHSQHGEDRVATPVPEPKKSENTSDAHNQQLALALPHQIA 164
>AT5G14540.1 | Symbols: | Protein of unknown function (DUF1421) |
chr5:4687333-4689624 REVERSE LENGTH=547
Length = 547
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 67/101 (66%)
Query: 74 VIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLK 133
+I+ +++++K ++D L+ +EG+ +RL+QLE +L+ + +++ + + H + D KL+
Sbjct: 126 IISAIDRTMKAHADKLLHVMEGVSARLTQLETRTRDLENLVDDVKVSVGNSHGKTDGKLR 185
Query: 134 SIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKESSP 174
+E + EV VQ+LKDKQE+ +AQ +L+KLQL + P
Sbjct: 186 QLENIMLEVQNGVQLLKDKQEIVEAQLQLSKLQLSKVNQQP 226
>AT3G01560.1 | Symbols: | Protein of unknown function (DUF1421) |
chr3:219884-221707 FORWARD LENGTH=511
Length = 511
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 44/169 (26%)
Query: 41 IDPSKDFHISRMTKAAAL----------------------------PATAYGSPEG---- 68
I PS DFH R T AA L P T +GS +
Sbjct: 55 IVPSYDFHPIRPTTAARLSHSALDLAGSTTRVNWSASDYKPVSTTSPNTNFGSLDSIEPS 114
Query: 69 ----SLGQDVIAT------VEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMR 118
GQ+V T +++++K ++D L+ +EG+ +RLSQLE +NL+ + +++
Sbjct: 115 KLVPDKGQNVFNTTIMSEIIDRTMKKHTDTLLHVMEGVSARLSQLETRTHNLENLVDDLK 174
Query: 119 SDLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQL 167
+++ H D K++ ++ + EV VQ+LKDKQE+ +AQ L+K Q+
Sbjct: 175 VSVDNSHGSTDGKMRQLKNILVEVQSGVQLLKDKQEILEAQ--LSKHQV 221