Miyakogusa Predicted Gene
- Lj3g3v2809070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2809070.1 Non Chatacterized Hit- tr|I3T3F4|I3T3F4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.79,0,seg,NULL;
LIPOYLTRANSFERASE, PUTATIVE,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat dom,CUFF.44653.1
(489 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 125 7e-29
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 125 7e-29
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 125 7e-29
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-11
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-11
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 61 2e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 55 1e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 4e-07
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 8e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 50 3e-06
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 50 3e-06
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 50 5e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 49 7e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 281/437 (64%), Gaps = 7/437 (1%)
Query: 26 STEAPVD-FSALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTH 84
+T +P+D + L+ RV +SGDP + +L+ W++ G + +L +I L F RF+H
Sbjct: 29 TTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSH 88
Query: 85 ALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSC 144
ALQ+S+WMS R +++S G +A R+ LI+KV GL +AE FF+ IP ++R + +Y +LL+C
Sbjct: 89 ALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNC 148
Query: 145 YAEHKSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNG 204
YA K L L + + YN++L LY + GKY +++L++EM E++
Sbjct: 149 YASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREM-EDETVKP 207
Query: 205 ATFTI--RLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAA 262
FT+ RL+AY DVEGMEK LM+ EAD +DW TY+ ANGY+KAG EKAL
Sbjct: 208 DIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEM 267
Query: 263 LKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLK 322
L+KSEQ V +K + AYE L S Y A G K+EVYRLW+ K L +N+ YI ++S+LLK
Sbjct: 268 LRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLK 327
Query: 323 LDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSS 382
+DD + EKI+ EWE+ H FD RIP+L+IT YCK+G+++KAE + L+ + D S+
Sbjct: 328 MDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTST 387
Query: 383 WDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILK 442
W+R+A GY M MEKAV+ K+AI ++PGWRP L++C+ YL+ + D+E +IL+
Sbjct: 388 WERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILR 447
Query: 443 LCKEDGHIKITTYDGLV 459
L E GHI +YD L+
Sbjct: 448 LLSERGHI---SYDQLL 461
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/370 (45%), Positives = 239/370 (64%), Gaps = 6/370 (1%)
Query: 92 MSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSL 151
MS R +++S G +A R+ LI+KV GL +AE FF+ IP ++R + +Y +LL+CYA K L
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 152 XXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTI-- 209
L + + YN++L LY + GKY +++L++EM E++ FT+
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREM-EDETVKPDIFTVNT 119
Query: 210 RLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQS 269
RL+AY DVEGMEK LM+ EAD +DW TY+ ANGY+KAG EKAL L+KSEQ
Sbjct: 120 RLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQM 179
Query: 270 VKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGA 329
V +K + AYE L S Y A G K+EVYRLW+ K L +N+ YI ++S+LLK+DD +
Sbjct: 180 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEV 239
Query: 330 EKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAG 389
EKI+ EWE+ H FD RIP+L+IT YCK+G+++KAE + L+ + D S+W+R+A G
Sbjct: 240 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 299
Query: 390 YHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGH 449
Y M MEKAV+ K+AI ++PGWRP L++C+ YL+ + D+E +IL+L E GH
Sbjct: 300 YKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGH 359
Query: 450 IKITTYDGLV 459
I +YD L+
Sbjct: 360 I---SYDQLL 366
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 242/462 (52%), Gaps = 13/462 (2%)
Query: 25 YSTEAPVDFSALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTH 84
Y V ++A+ ++ P A +LNQW + G +T+ +L R++ L ++R
Sbjct: 58 YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 117
Query: 85 ALQVSEWMSNE-RNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLS 143
AL+V +WM+N + LS+ A ++ LI KV G+ AE+FF +P++ + ++Y SLL+
Sbjct: 118 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 177
Query: 144 CYAEHKSLXXXXXXXXXXX----XLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKEN 199
Y KS L P+ +N+++ LY +Y+K+D ++ EMK+
Sbjct: 178 AYVRAKSREKAEALLNTMRDKGYALHPLP----FNVMMTLYMNLREYDKVDAMVFEMKQK 233
Query: 200 DL-CNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEK 258
D+ + ++ I L++ + VE ME + QM++D +W T+ST A Y+K G EK
Sbjct: 234 DIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEK 293
Query: 259 ALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNL-QNCWNSSYICML 317
A AL+K E + G+ R+ Y L S Y ++GNK E+YR+W+ K++ + N Y ++
Sbjct: 294 AEDALRKVEARITGRN-RIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALV 352
Query: 318 SSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKK 377
SSL+++ D +GAEK+ EW ++D RIPNL++ AY K L+ AE +++ G K
Sbjct: 353 SSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGK 412
Query: 378 LDGSSWDRMAAGYHMDNDMEKAVQTMKKAILA-NRPGWRPSPSTLVACITYLKEKLDLES 436
S+W+ +A G+ + +A+ ++ A A WRP L +E+ D+ S
Sbjct: 413 PSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTS 472
Query: 437 ALEILKLCKEDGHIKITTYDGLVSYAHGEIPDKEALDLMKRD 478
+L+L ++ G ++ +Y L+ + +D + D
Sbjct: 473 KEAVLELLRQSGDLEDKSYLALIDVDENRTVNNSEIDAHETD 514
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 233/429 (54%), Gaps = 11/429 (2%)
Query: 24 YYSTEAPVDFSALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFT 83
YY T V + L +++ GDP++ + P L WV+ G ++ +L R++ L +RF
Sbjct: 16 YYYTNR-VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFL 74
Query: 84 HALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLS 143
HAL+VS+WM+ S A + LI +V+G AE++F+ + + + K Y +LL+
Sbjct: 75 HALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLN 134
Query: 144 CYAEHKSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC- 202
CY +++ + + ++ YN ++ LY G++EK+ ++++EMKE ++
Sbjct: 135 CYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAP 194
Query: 203 NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAA 262
+ ++ I +NA+ A D+E + L ME T+DW TY+ AA Y+ G+ ++A+
Sbjct: 195 DNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVEL 254
Query: 263 LKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNL-QNCWNSSYICMLSSLL 321
LK SE ++ KK Y L + YA +G K EV RLW+ K++ + N Y+ +L SL+
Sbjct: 255 LKMSENRLE-KKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLV 313
Query: 322 KLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGS 381
K+D AE++L EW+S +D R+PN +I Y + + +KAEA ++ L GK
Sbjct: 314 KIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPE 373
Query: 382 SWDRMAAGYHMDNDMEKAVQTMKKAI---LANRPGWRPSPSTLVACITYLKEKLDL---E 435
SW+ +A Y +E A + MK A+ + +R WRP + + + ++++ ++ L E
Sbjct: 374 SWELVATAYAEKGTLENAFKCMKTALGVEVGSRK-WRPGLTLVTSVLSWVGDEGSLKEVE 432
Query: 436 SALEILKLC 444
S + L+ C
Sbjct: 433 SFVASLRNC 441
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 223/411 (54%), Gaps = 5/411 (1%)
Query: 54 LNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLIS 113
+ +W E G + + +L R++ L +R+ HAL++ EWM + + L +G A + LIS
Sbjct: 81 IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLIS 140
Query: 114 KVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTVCY 173
K+ GL AE FF+ +PD RG SLL Y ++K + + Y
Sbjct: 141 KIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPY 200
Query: 174 NILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQMEAD 233
N +L +Y +G++EK+ L++E+K + T+ + L A+ + DVEG EK+ ++ + +
Sbjct: 201 NHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEE 260
Query: 234 PMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKD 293
+ DW TYS N Y K NVEKA ALK+ E+ V KK R+AY SL S +A +G+KD
Sbjct: 261 KL-NPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLV-SKKNRVAYASLISLHANLGDKD 318
Query: 294 EVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMI 352
V W ++K + + ++ Y+ M+S+++KL +F+ A+ + EWES D RIPNL++
Sbjct: 319 GVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLIL 378
Query: 353 TAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRP 412
Y R + E + +++++ G S+W+ + Y DMEK + KAI + +
Sbjct: 379 AEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKK 438
Query: 413 GWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLV-SYA 462
W + + L+E+ +++ A +++ L ++ G++ Y+ L+ +YA
Sbjct: 439 -WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYA 488
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 251/486 (51%), Gaps = 22/486 (4%)
Query: 9 KQHFNMS-LVSRPFPLYYSTEAPVDFSALETR-----VLKSGDPRTPMAPILNQWVEGGG 62
K FN + +VSR L S D S++ R +L+ PR + +L + ++ G
Sbjct: 10 KTRFNTTGVVSR---LVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGH 66
Query: 63 DITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAE 122
++ +L+ + RL R+ ALQ+ EWM N+++ + S IA R+ LI K HGLK+ E
Sbjct: 67 AVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGE 126
Query: 123 DFFQGIPDDKRGFKI----YASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTVCYNILLK 178
++F+ + ++ Y LL Y ++K + L + +N ++K
Sbjct: 127 EYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMK 186
Query: 179 LYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMAT 237
LY G+YEK+ ++ MK N + N ++ + +NA V +E + +M D
Sbjct: 187 LYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVE 246
Query: 238 VDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYR 297
V W + T AN Y+K+G EKA L+ +E+ + + RL Y L + YA++GNK+ V R
Sbjct: 247 VGWSSLCTLANVYIKSGFDEKARLVLEDAEKML-NRSNRLGYFFLITLYASLGNKEGVVR 305
Query: 298 LWNRIKNLQ---NCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITA 354
LW K++ +C N YIC+LSSL+K D + AE++ +EWE++ N+D R+ N+++ A
Sbjct: 306 LWEVSKSVCGRISCVN--YICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGA 363
Query: 355 YCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKA-ILANRPG 413
Y + G + KAE+ +L+ G + +W+ + G+ +MEKA+ M + +L R
Sbjct: 364 YVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCH 423
Query: 414 WRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLVS-YAHGEIPDKEAL 472
WRPS + ++A Y +++ +E A ++ G + Y L+ + H + P +
Sbjct: 424 WRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIY 483
Query: 473 DLMKRD 478
++MK D
Sbjct: 484 EMMKLD 489
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 213/415 (51%), Gaps = 10/415 (2%)
Query: 36 LETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNE 95
L R+ K G + LNQ+++G + + ++ I +L + AL++SE M E
Sbjct: 25 LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVME-E 83
Query: 96 RNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXX 155
R + + A + L++K + E++F +P+ + Y SLL+CY +
Sbjct: 84 RGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 143
Query: 156 XXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMK-ENDLCNGATFTIRLNAY 214
L ++ YN L+ LY + G+ EK+ ++QE+K EN + + T+ + + A
Sbjct: 144 GLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRAL 203
Query: 215 VAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKK 274
A D+ G+E+++ +M D DW TYS A+ Y+ AG +KA AL++ E +
Sbjct: 204 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 263
Query: 275 LRLAYESLQSTYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKIL 333
AY+ L + Y +G EVYR+W ++ + N +Y+ M+ L+KL+D GAE +
Sbjct: 264 F-TAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 322
Query: 334 AEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMD 393
EW++ +D RI N++I AY + GL+ KA +K G KL+ +W+ Y
Sbjct: 323 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 382
Query: 394 NDMEKAVQTMKKAILANRPG---WRPSPSTLVACITYLKEKLDL---ESALEILK 442
DM +A++ M KA+ + W PSP T+ A ++Y ++K D+ E+ LEILK
Sbjct: 383 GDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILK 437
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 191/368 (51%), Gaps = 14/368 (3%)
Query: 16 LVSRPFPLYYSTEAPVDFSALET------RVLKSGDPRTPMAPILNQWVEGGGDITQIQL 69
L RP+ Y + V S L+ R+ + + P+L QW + G + +
Sbjct: 13 LAKRPYGAYQNV-ITVSMSWLKIHGSCPHRITDALHRNAQIIPVLEQWRQQGNQVNPSHV 71
Query: 70 QRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIP 129
+ +I +L + ALQVSEWMS E+ +L A R+HLI V GL++AE FF+ IP
Sbjct: 72 RVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIP 131
Query: 130 DDKRGFKIYASLLSCYAEH-KSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEK 188
+ RG +Y SLL+ YA K+L L + V YN ++ LY+ EK
Sbjct: 132 KNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREK 191
Query: 189 LDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAA 247
++ L+ EMK+ND+ + T L Y A DV MEK L + E ++W+T A
Sbjct: 192 VEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMA 251
Query: 248 NGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKN-LQ 306
YL+A + KA+ L+ +EQ V K L+ AY+ L Y GN++EV R+W K+ +
Sbjct: 252 KAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIG 311
Query: 307 NCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEA 366
N+ Y ++ SLLK+DD GAE+I WES FD RIP ++ + Y RG+ +KAE
Sbjct: 312 ERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAE- 370
Query: 367 YIQKLLDS 374
KL++S
Sbjct: 371 ---KLMNS 375
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 36 LETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNE 95
+ ++ +K P+ P+L QW G + L+ LI L ++F+ ALQVSEWM +
Sbjct: 373 MNSKTIKDRRMNKPVTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEK 429
Query: 96 RNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXX 155
+ +L A R++L V GL++AE +F+ IP++ + + +Y +LLS YA+
Sbjct: 430 QVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK-------- 481
Query: 156 XXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAY 214
+ K +D +++EM+EN++ + T L Y
Sbjct: 482 -------------------------SDKNLGNMVDEILREMEENNVDPDLITVNHVLKVY 516
Query: 215 VAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKK 274
A ++ ME + + + Y A + N+ K E+ V+ K
Sbjct: 517 AAESKIQAMEMFMRRWAVE--------VYGDVARCKREVHNLWDECKNNK--EEEVEDGK 566
Query: 275 LRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILA 334
RL + L + Y ++SSLLKLDD G EK+
Sbjct: 567 KRLPV----------------------VTTLLKMDDDGYRTVISSLLKLDDVQGVEKVYG 604
Query: 335 EWE 337
EW+
Sbjct: 605 EWK 607
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 202/399 (50%), Gaps = 12/399 (3%)
Query: 50 MAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRI 109
M LNQ+V G + + L R L FR+ AL++ EWM + + A R+
Sbjct: 56 MEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME-RKEIAFTGSDHAIRL 114
Query: 110 HLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLRPMHL 169
+LI+K GL+ AE +F + D + Y SLL+CY K L +
Sbjct: 115 NLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSN 174
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDL--CNGATFTIRLNAYVAAKDVEGMEKLL 227
++ +N L+ +Y G+ EK+ L+ MKE + C+ T+++ + + + KD++G+EK+L
Sbjct: 175 SLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCD-ITYSMWIQSCGSLKDLDGVEKVL 233
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYA 287
+M+A+ W T++ A Y+K G KA ALK E ++ +R Y L + Y
Sbjct: 234 DEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNM-NPDVRDCYHFLINLYT 292
Query: 288 AIGNKDEVYRLWNRIKN-LQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTR 346
I N EVYR+W+ +K N NSSY+ ML +L KLDD DG +K+ AEWES +D R
Sbjct: 293 GIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMR 352
Query: 347 IPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGS-SWDRMAAGYHM--DNDMEKAVQTM 403
+ N+ I++Y K+ + ++AEA + KK G S R H+ ++ + A++
Sbjct: 353 MANVAISSYLKQNMYEEAEAVFNGAM---KKCKGQFSKARQLLMMHLLKNDQADLALKHF 409
Query: 404 KKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILK 442
+ A+L W S + + + +E D++ A E K
Sbjct: 410 EAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCK 448
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 9/331 (2%)
Query: 50 MAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRI 109
+A LNQ++ G + + L R L FRR HA ++ +WM +R S A +
Sbjct: 87 VAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWME-KRKMTFSVSDHAICL 145
Query: 110 HLISKVHGLKKAEDFFQGI-PDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLRPMH 168
LI K GL+ AE++F + P K Y +L++CY L ++
Sbjct: 146 DLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVN 205
Query: 169 LTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCN-GATFTIRLNAYVAAKDVEGMEKLL 227
++ +N ++ +Y + + EK+ L+ MK+ + G T++I + + + D++G+EK++
Sbjct: 206 NSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKII 265
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYA 287
+M D A W T+S A Y KAG EKA +ALK E+ + R ++ L S YA
Sbjct: 266 DEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNN-RDSHHFLMSLYA 324
Query: 288 AIGNKDEVYRLWNRIKNLQ-NCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTR 346
I EVYR+W +K + N SY+ ML ++ KL D DG +KI EWES+ +D R
Sbjct: 325 GISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMR 384
Query: 347 IPNLMITAYCKRGLLDKAEAYIQKLLDSGKK 377
+ N+ I Y K + ++AE K+LD K
Sbjct: 385 LANIAINTYLKGNMYEEAE----KILDGAMK 411
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 6/337 (1%)
Query: 36 LETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNE 95
L++R+ + P+ +L +W+ G +T +L+ + L RR+ HAL+V+EWM
Sbjct: 57 LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 116
Query: 96 RNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXX 155
+S A RI LISKV G+ AE +F+G+ D + + Y SLL YA K
Sbjct: 117 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 176
Query: 156 XXXXXXXXLRPMHL-TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNA 213
+ + YN ++ LY G+ EK+ +++ +K+ + + T+ + L++
Sbjct: 177 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 236
Query: 214 YVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALK-KSEQSVKG 272
A +++ + K+L +M D + W Y + Y+ + V A + L ++E+S+
Sbjct: 237 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 296
Query: 273 KKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEK 331
++ + Y+ L + +GNK + ++W ++N +S SYIC+LSS L L AE+
Sbjct: 297 REW-ITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEE 355
Query: 332 ILAEW-ESEHKNFDTRIPNLMITAYCKRGLLDKAEAY 367
I+ +W ES+ FD ++ A+ GL A +
Sbjct: 356 IIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGF 392
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 137/265 (51%), Gaps = 4/265 (1%)
Query: 38 TRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERN 97
+R++ G + + P L++W++ G D+ L+ LI L +RF HALQVSEW++
Sbjct: 37 SRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGI 96
Query: 98 YDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXXXX 157
+DLS+ A R+ L+ GLK+AE FF+ IP++ R ++ +LLS Y K
Sbjct: 97 FDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEA 156
Query: 158 XXXXXXLRPMHL-TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIR--LNAY 214
++ M L Y ++ LYA G+ +D ++++MKEN + + T L AY
Sbjct: 157 TYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAY 216
Query: 215 VAAKDVEGMEKLLMQMEA-DPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGK 273
+ DVE ME LM +E +P ++ W T + A YLK G+ KA+ L+++E V K
Sbjct: 217 ASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTK 276
Query: 274 KLRLAYESLQSTYAAIGNKDEVYRL 298
A + L Y G K + RL
Sbjct: 277 SKDSANKVLMMMYWDAGAKQDASRL 301
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 145/309 (46%), Gaps = 38/309 (12%)
Query: 69 LQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGI 128
L+ ++ +L R AL+VS+WM ++ Y+L A R HL KV L++AE FF+ I
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSA-RFHLTEKVLNLEEAEKFFESI 136
Query: 129 PDDKRGFKIYASLLSCYAEH---KSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGK 185
P++ R +Y SLL YA K+L L + YN + LY+ G
Sbjct: 137 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 196
Query: 186 YEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYS 244
+K+D +++EMKEN++ + T L Y A DV M+K L + + +D T
Sbjct: 197 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL--ADRKEITRLDGLTML 254
Query: 245 TAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKN 304
A Y L S Y G ++V+R+W++ K
Sbjct: 255 AMAKAY------------------------------ELMSLYGEAGEIEDVHRVWDKYKA 284
Query: 305 LQNCWNSSYICMLSSLLKLDDFDGAEKI-LAEWESEHKNFDTRIPNLMITAYCKRGLLDK 363
+ N + ++ SLLKL D GAEKI EWE FD RIP+++++ Y ++G++ K
Sbjct: 285 TRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMK 344
Query: 364 AEAYIQKLL 372
A+ + K L
Sbjct: 345 ADKLVNKTL 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 48 TPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAK 107
TP+ +L + + G ++ L+ LI L + + AL+ S WM ++ ++L S A
Sbjct: 360 TPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYAT 419
Query: 108 RIHLISKVHGLKKAEDFFQ-GIPDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLRP 166
R+HL KV GL++AE+FF+ IP++ + + +Y +LLSCYA +S +R
Sbjct: 420 RLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYA--RSSNTQSKAEAVFEKMRE 477
Query: 167 MHLT---VCYNILLKLYAQKGKYEKLDRLMQEMK----ENDLCNGATFTIRLNAYVAAKD 219
+ L +N L+ LY+ +GK ++ L+ +MK E D+ +R NAY+ A
Sbjct: 478 LGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNN-VLRANAYILA-- 534
Query: 220 VEGMEKL 226
++ MEK+
Sbjct: 535 IDSMEKV 541
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 16/367 (4%)
Query: 46 PRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLI 105
P + L++WVE G +IT++++ + + +L R + ALQ+SEW+ + +++
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 106 AKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLS-CYAEHKSLXXXXXXXXXXXXL 164
A R+ L K+ GL+K E Q IP +G +Y +LL+ C A
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 165 RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGME 224
P+ C +LL L+ + + + D L+ KEN + T+ I ++ A D+ GME
Sbjct: 260 FPLSGFTCDQMLL-LHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSE-QSVKGKKLRLAYESLQ 283
++L M+ D +D+ T + A Y AG +KA LK+ E +S++ R A++ L
Sbjct: 319 QILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEAN--RRAFKDLL 375
Query: 284 STYAAIGNKDEVYRLWNRIKNLQNCWNSSY----ICMLSSLLKLDDFDGAEKILAEWESE 339
S YA++G +DEV R+W + C + Y + + + KL+ AE I +
Sbjct: 376 SIYASLGREDEVKRIW------KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKM 429
Query: 340 HKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKA 399
+ + ++++ Y +L K + ++++ +SG +++ ++WD + Y ++EKA
Sbjct: 430 DRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA 489
Query: 400 VQTMKKA 406
+ KA
Sbjct: 490 DSLLDKA 496
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 16/367 (4%)
Query: 46 PRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLI 105
P + L++WVE G +IT++++ + + +L R + ALQ+SEW+ + +++
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 106 AKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLS-CYAEHKSLXXXXXXXXXXXXL 164
A R+ L K+ GL+K E Q IP +G +Y +LL+ C A
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 165 RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGME 224
P+ C +LL L+ + + + D L+ KEN + T+ I ++ A D+ GME
Sbjct: 260 FPLSGFTCDQMLL-LHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSE-QSVKGKKLRLAYESLQ 283
++L M+ D +D+ T + A Y AG +KA LK+ E +S++ R A++ L
Sbjct: 319 QILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEAN--RRAFKDLL 375
Query: 284 STYAAIGNKDEVYRLWNRIKNLQNCWNSSY----ICMLSSLLKLDDFDGAEKILAEWESE 339
S YA++G +DEV R+W + C + Y + + + KL+ AE I +
Sbjct: 376 SIYASLGREDEVKRIW------KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKM 429
Query: 340 HKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKA 399
+ + ++++ Y +L K + ++++ +SG +++ ++WD + Y ++EKA
Sbjct: 430 DRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA 489
Query: 400 VQTMKKA 406
+ KA
Sbjct: 490 DSLLDKA 496
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 16/367 (4%)
Query: 46 PRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLI 105
P + L++WVE G +IT++++ + + +L R + ALQ+SEW+ + +++
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 106 AKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLS-CYAEHKSLXXXXXXXXXXXXL 164
A R+ L K+ GL+K E Q IP +G +Y +LL+ C A
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLG 259
Query: 165 RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGME 224
P+ C +LL L+ + + + D L+ KEN + T+ I ++ A D+ GME
Sbjct: 260 FPLSGFTCDQMLL-LHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 318
Query: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSE-QSVKGKKLRLAYESLQ 283
++L M+ D +D+ T + A Y AG +KA LK+ E +S++ R A++ L
Sbjct: 319 QILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEAN--RRAFKDLL 375
Query: 284 STYAAIGNKDEVYRLWNRIKNLQNCWNSSY----ICMLSSLLKLDDFDGAEKILAEWESE 339
S YA++G +DEV R+W + C + Y + + + KL+ AE I +
Sbjct: 376 SIYASLGREDEVKRIW------KICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKM 429
Query: 340 HKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKA 399
+ + ++++ Y +L K + ++++ +SG +++ ++WD + Y ++EKA
Sbjct: 430 DRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA 489
Query: 400 VQTMKKA 406
+ KA
Sbjct: 490 DSLLDKA 496
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 218/475 (45%), Gaps = 33/475 (6%)
Query: 24 YYSTEAPVDFSALETRVLKSGDPRTPMAPI-----------LNQWVEGGGDITQIQLQRL 72
+ E ++ + LE V +S P I L++WVE G D + + +
Sbjct: 105 FSGDEGDIEGAELELHVPESKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESA 164
Query: 73 ITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDK 132
+ +L R F ALQ++EW+ + +++ A R+ LISKV G K E + + IP+
Sbjct: 165 MLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESF 224
Query: 133 RGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLR-PMHLTVCYNILLKLYAQKGKYEKLDR 191
RG +Y +LL+ + ++ L P+ C N +L LY + K + D
Sbjct: 225 RGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTC-NQMLILYKRVDKKKIADV 283
Query: 192 LMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYL 251
L+ KEN N T+ I ++ ++ D+ GME+++ M+++ + +D + A Y
Sbjct: 284 LLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGV-ELDLRARALIARHYA 342
Query: 252 KAGNVEKALAALKKSEQSVKGKKL---RLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNC 308
AG EKA LK+ E G+ L R + L S Y + +DEV R+W +
Sbjct: 343 SAGLKEKAEKVLKEME----GESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEE---- 394
Query: 309 WNSSYICMLSSLL---KLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAE 365
N Y +L+++L K+D AE + + + + ++++ Y ++ + +
Sbjct: 395 -NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGK 453
Query: 366 AYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACI 425
++++ DSG + +WD + Y ++EKA ++ KAI + + +P S+ + +
Sbjct: 454 DLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQ--IKPLMSSFMYLM 511
Query: 426 TYLKEKLDLESALEILKLCKEDGH-IKITTYDGLV-SYAHGEIPDKEALDLMKRD 478
+ D+ + +I + K+ G+ + Y L+ +Y + + P + MK D
Sbjct: 512 HEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKAD 566
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 206/432 (47%), Gaps = 16/432 (3%)
Query: 53 ILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLI 112
+L +WV+ G D++Q ++ I L + + LQ+ EW+ ++ + A ++ L+
Sbjct: 160 VLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLV 219
Query: 113 SKVHGLKKAEDFFQGIPDDKRGFKIYASLLS-CYAEHKSLXXXXXXXXXXXXLRPMHLTV 171
+KVH L+KAE F + IP+ RG +Y +LL+ C +H P +
Sbjct: 220 AKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFA 279
Query: 172 CYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQME 231
C N LL LY+ + + D L+ +EN + AT+ +N+ A D+ GMEK++ ++
Sbjct: 280 C-NQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIK 338
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRL---AYESLQSTYAA 288
+ + +D S A Y++AG E+A +K+ ++GK L+ SL YA
Sbjct: 339 EEGI-ELDPELQSILAKYYIRAGLKERAQDLMKE----IEGKGLQQTPWVCRSLLPLYAD 393
Query: 289 IGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIP 348
IG+ D V RL + QN + I + + KL + + AE + ++K F
Sbjct: 394 IGDSDNVRRLSRFVD--QNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPY 451
Query: 349 NLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAIL 408
++ Y + +L K ++++ ++G + S+W + Y ++ KA + +A
Sbjct: 452 FALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATK 511
Query: 409 ANRPGWRPSPSTLVACITYLKEKLDLESALEI-LKLCKEDGHIKITTYDG-LVSYAHGEI 466
N+ RP +T +A + ++ D+ + ++ +K+ + ++ Y+ L++Y + +
Sbjct: 512 DNK--MRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKT 569
Query: 467 PDKEALDLMKRD 478
P ++ MK D
Sbjct: 570 PAYGMIERMKAD 581
>AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8928009-8928908 REVERSE
LENGTH=299
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 29/281 (10%)
Query: 176 LLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAK--DVEGMEKLLMQMEA 232
+L LY Q ++ + +L+ EM E + G F L +Y A DV+G+EK L + E
Sbjct: 1 MLCLYHQAEDHDMVVKLLGEMDEKKMQPQGLCFVKLLTSYSMASVVDVQGVEKFLSKWEV 60
Query: 233 DPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNK 292
M W T+ Y++AG +EK LA L++SE V + Y L + Y
Sbjct: 61 --MIQDKWTTFYFPGLVYIRAGFMEKGLALLRRSETFVDDGCREIIYGCLMTVYCNENLT 118
Query: 293 DEVYRLWNRIKNLQNCWNSSYIC-MLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLM 351
++VYRLWN K+ ++SS ++ + K D DG ++ EW +E N D LM
Sbjct: 119 EDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKGDLDG---VMEEW-NECPNLD-----LM 169
Query: 352 ITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILAN- 410
R + ++AE + L GKK S W+ +A + + E A + ++ +A
Sbjct: 170 DFGLQHRCVKEEAEKVVDML---GKK--ESKWESLAHKVNTLVEDEDAKEEERRKRVAEA 224
Query: 411 -----RPGWRPSPS---TLVACITYLKEKLDLESALEILKL 443
W P S + AC+ Y++ + D+ES +IL+L
Sbjct: 225 MEGRLHDRWNPKNSMALSAFACVQYVEGRRDMESTADILRL 265
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 178/403 (44%), Gaps = 19/403 (4%)
Query: 54 LNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLIS 113
L W+ G + + I RL R AL++ EW+ ER Y L + +
Sbjct: 85 LQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSYLLEFTV 144
Query: 114 KVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXL--RPMHLTV 171
K+HG+ + E F +P + + +Y +L+ + + L R HL
Sbjct: 145 KLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLV- 203
Query: 172 CYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQM 230
YN L+ + G+ + + + + MK + + +T+ I + +++G+ K M
Sbjct: 204 -YNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGM 262
Query: 231 EADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIG 290
+ + + +Y A + A A A ++ E+S+ G + L Y +G
Sbjct: 263 KKAGVEP-NEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWS-TLDILMILYGRLG 320
Query: 291 NKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNL 350
+ E+ R WN I+ + + SY+ + ++ + D AE++ E ++ +T N
Sbjct: 321 KEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNS 380
Query: 351 MITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK------ 404
+++ YCK GL++KA +++ +G K + ++ +A G M++A++ ++
Sbjct: 381 LLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGLNLK 440
Query: 405 --KAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCK 445
K+I ++ P W + +++ C EK D+E++ ++ + K
Sbjct: 441 TSKSIGSSTP-WLETTLSIIECFA---EKGDVENSEKLFEEVK 479
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 30 PVDFSALETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVS 89
P L +R+ + + + P+L QW + G ++ L+ LI L+ + FT AL+ S
Sbjct: 32 PAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEAS 91
Query: 90 EWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHK 149
+WM +D A ++HL++ V GL++AE F+ IP+ R Y+ LLS Y K
Sbjct: 92 KWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYT--K 146
Query: 150 SLXXXXXXXXXXXXLRPMHLTV---CYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGAT 206
+ +R + + +N ++ LY Q + + +++L+ ++K+N++ G+
Sbjct: 147 PVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSL 206
Query: 207 FTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKA 259
++ A ++ MEK + + + ++ T A Y +AG++EKA
Sbjct: 207 KVNNVSRVYA--NINAMEKFKTWVSKEGI-ELERDTIVAMAKAYHRAGSIEKA 256
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 18/337 (5%)
Query: 109 IHLISKVHGLKKAEDFFQGIPDDK--RGFKIYASLLS--CYAEHKSLXXXXXXXXXXXXL 164
IH + + +A D F + DD+ + Y L+ C +E KS +
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 165 RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGM 223
+P T Y +L+ + K+EK L+ +M E L N T+ +N Y +E
Sbjct: 355 KPNIHT--YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 224 EKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQ 283
++ ME+ ++ + TY+ GY K+ NV KA+ L K + K + Y SL
Sbjct: 413 VDVVELMESRKLSP-NTRTYNELIKGYCKS-NVHKAMGVLNKMLER-KVLPDVVTYNSLI 469
Query: 284 STYAAIGNKDEVYRLWNRIKN---LQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEH 340
GN D YRL + + + + + W +Y M+ SL K + A + E +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQW--TYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 341 KNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAV 400
N + + +I YCK G +D+A ++K+L + +++ + G D +++A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 401 QTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESA 437
+K + + G +P+ ST I L + D + A
Sbjct: 588 LLEEKMV---KIGLQPTVSTDTILIHRLLKDGDFDHA 621
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 13/266 (4%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLM 228
V YN L+ + G ++ RL+ M + L T+T +++ +K VE L
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKK--SEQSVKGKKLRLAYESLQSTY 286
+E + + Y+ +GY KAG V++A L+K S+ + L + +L
Sbjct: 522 SLEQKGVNP-NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS---LTFNALIHGL 577
Query: 287 AAIGNKDEVYRLWNRIK--NLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
A G E L ++ LQ ++ I ++ LLK DFD A + S D
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTI-LIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
I YC+ G L AE + K+ ++G D ++ + GY A +K
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 405 KAILANRPGWRPSPSTLVACITYLKE 430
+ G PS T ++ I +L E
Sbjct: 697 R---MRDTGCEPSQHTFLSLIKHLLE 719
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 10/187 (5%)
Query: 291 NKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNL 350
NKDE + L + K + C+N+ +L+SL + D +++ E + + N
Sbjct: 170 NKDERFEL--KYKLIIGCYNT----LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 351 MITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILAN 410
M+ YCK G +++A Y+ K++++G D ++ + GY D++ A + + L
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK- 282
Query: 411 RPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHI-KITTYDGLVSYAHGEIPDK 469
G R + I L ++ A+++ K+D + TY L+ G
Sbjct: 283 --GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 470 EALDLMK 476
EAL+L+K
Sbjct: 341 EALNLVK 347
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 166 PMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGME 224
PM ++ N L+K + + G E+L + ++MKEN + T+ +N V+A V+ E
Sbjct: 184 PMTVSAA-NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQS 284
++ ME+ + D TY+T GY KAG +KA+ L+ E +E+ +
Sbjct: 243 RVFEVMESGRIKP-DIVTYNTMIKGYCKAGQTQKAMEKLRDMETR--------GHEADKI 293
Query: 285 TYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
TY + +Q C+ S DF + E + +
Sbjct: 294 TYMTM---------------IQACYADS------------DFGSCVALYQEMDEKGIQVP 326
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
+L+I CK G L++ + ++ G K + + + + GY +E A++ +
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 405 KAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDG 448
+ I G++P T + L + +E AL+ C+ DG
Sbjct: 387 RMI---DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 144/323 (44%), Gaps = 17/323 (5%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLM 228
TV Y L+ + ++G + EM D+ T+T ++ + D+ KL
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAA 288
+M + D T++ NGY KAG+++ A Q+ + + Y +L
Sbjct: 411 EMFCKGLEP-DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV-VTYTTLIDGLCK 468
Query: 289 IGNKDE----VYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
G+ D ++ +W +I N + +Y +++ L K + + A K++ E+E+ N D
Sbjct: 469 EGDLDSANELLHEMW-KIGLQPNIF--TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
T ++ AYCK G +DKA+ ++++L G + +++ + G+ + +E + +
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLL 584
Query: 405 KAILANRPGWRPSPSTLVACITYLKEKLDLESALEILK-LCKEDGHIKITTYDGLVSYAH 463
+LA G P+ +T + + + +L++A I K +C TY+ LV
Sbjct: 585 NWMLAK--GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 464 GEIPDKEALDLMKRDYQMDGKNY 486
KEA L + +M GK +
Sbjct: 643 KARNMKEAWFLFQ---EMKGKGF 662
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 10/273 (3%)
Query: 192 LMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGY 250
+ +E E +C N A++ I ++ ++ LL+ ME T D +YST NGY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-TPDVISYSTVVNGY 291
Query: 251 LKAGNVEKA--LAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNC 308
+ G ++K L + K + + + L + +E + R L +
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD- 350
Query: 309 WNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYI 368
Y ++ K D A K E S D +I+ +C+ G + +A
Sbjct: 351 -TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 369 QKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYL 428
++ G + D ++ + GY M+ A + I A G P+ T I L
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA---GCSPNVVTYTTLIDGL 466
Query: 429 KEKLDLESALEIL-KLCKEDGHIKITTYDGLVS 460
++ DL+SA E+L ++ K I TY+ +V+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 144/323 (44%), Gaps = 17/323 (5%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLM 228
TV Y L+ + ++G + EM D+ T+T ++ + D+ KL
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAA 288
+M + D T++ NGY KAG+++ A Q+ + + Y +L
Sbjct: 411 EMFCKGLEP-DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV-VTYTTLIDGLCK 468
Query: 289 IGNKDE----VYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
G+ D ++ +W +I N + +Y +++ L K + + A K++ E+E+ N D
Sbjct: 469 EGDLDSANELLHEMW-KIGLQPNIF--TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
T ++ AYCK G +DKA+ ++++L G + +++ + G+ + +E + +
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLL 584
Query: 405 KAILANRPGWRPSPSTLVACITYLKEKLDLESALEILK-LCKEDGHIKITTYDGLVSYAH 463
+LA G P+ +T + + + +L++A I K +C TY+ LV
Sbjct: 585 NWMLAK--GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 464 GEIPDKEALDLMKRDYQMDGKNY 486
KEA L + +M GK +
Sbjct: 643 KARNMKEAWFLFQ---EMKGKGF 662
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 10/273 (3%)
Query: 192 LMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGY 250
+ +E E +C N A++ I ++ ++ LL+ ME T D +YST NGY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-TPDVISYSTVVNGY 291
Query: 251 LKAGNVEKA--LAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNC 308
+ G ++K L + K + + + L + +E + R L +
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD- 350
Query: 309 WNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYI 368
Y ++ K D A K E S D +I+ +C+ G + +A
Sbjct: 351 -TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 369 QKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYL 428
++ G + D ++ + GY M+ A + I A G P+ T I L
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA---GCSPNVVTYTTLIDGL 466
Query: 429 KEKLDLESALEIL-KLCKEDGHIKITTYDGLVS 460
++ DL+SA E+L ++ K I TY+ +V+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 169/410 (41%), Gaps = 25/410 (6%)
Query: 65 TQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYD--LSSGLIAKRIHLISKVHGLKKAE 122
T +L + L + ++F AL+ +W +++Y L + ++A I ++ K + A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 123 DFFQGIPDDKRGFKI----YASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTVCYNILLK 178
+ F G+ +D GF + Y SL+S +A + YN++L
Sbjct: 194 NMFNGLQED--GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 179 LYAQKG-KYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLMQMEADPMA 236
++ + G + K+ L+++MK + + A T+ + + ++ +M+A
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGF- 310
Query: 237 TVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLA-YESLQSTYAAIGNKDEV 295
+ D TY+ + Y K+ ++A+ L +E + G + Y SL S YA G DE
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVL--NEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 296 YRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITA 354
L N++ + +Y +LS + + A I E + + N I
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 355 YCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGY---HMDNDMEKAVQTMKKAILANR 411
Y RG + ++ G D +W+ + A + MD+++ + MK+A
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA----- 483
Query: 412 PGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIK-ITTYDGLVS 460
G+ P T I+ E A+ + + + G ++TY+ +++
Sbjct: 484 -GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 33/268 (12%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTI-RLNAYVAAKDVEGMEKLLMQ 229
V YN LL +Y + + ++ +++ EM + NG + +I N+ ++A +GM M+
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEM----VLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 230 ME---ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRL-AYESLQST 285
++ A+ D +TY+T +G+ +AG VE A++ + E G K + + +
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE--EMRNAGCKPNICTFNAFIKM 428
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKIL---------AEW 336
Y G E+ ++++ I C S I ++LL + +G + + A +
Sbjct: 429 YGNRGKFTEMMKIFDEI---NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 337 ESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDM 396
E + F+T +I+AY + G ++A +++LD+G D S+++ + A
Sbjct: 486 VPERETFNT-----LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 397 EKAVQTMKKAILANRPGWRPSPSTLVAC 424
E++ + +LA R P+ L C
Sbjct: 541 EQS-----EKVLAEMEDGRCKPNELTYC 563
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 81 RFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYAS 140
R AL+VS+WM + L + R LI V GL++AE +F+ IP++ RG +Y +
Sbjct: 55 RLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLYTA 114
Query: 141 LLSCYA---EHKSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMK 197
LL YA E K L +H+ I + G +K+D ++EMK
Sbjct: 115 LLRSYAKRSEKKYLDRASR----------IHIQEDERI-----SSFGTRDKVDESLREMK 159
Query: 198 ENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQMEA 232
E+++ + T L Y AA DV ME+ L E
Sbjct: 160 ESNIDLDRLTVNKALRVYAAASDVAAMERFLADWEG 195
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 43/274 (15%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYV-------------- 215
VC++ ++ L+ + G +K +KE L + +TI + Y
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 216 -----AAKDV-------EGMEKLLMQMEADPMAT--------VDWYTYSTAANGYLKAGN 255
A DV G+ K M EAD + D YT + +G+ K GN
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 256 VEKALAALKKSEQSVKGKKLRL---AYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS- 311
++ A+ +K +K K++RL Y +L + +G+ D +W + + +
Sbjct: 496 LQNAMELFQK----MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 312 SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKL 371
SY ++++L A ++ E S++ I N MI YC+ G E++++K+
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 372 LDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405
+ G D S++ + G+ + +M KA +KK
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 23/278 (8%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQME 231
YN ++ + GKYE+ + EM + L + T+ L DV EK+ M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKL---RLAYESLQSTYAA 288
+ + D +S+ + + ++GN++KAL SVK L + Y L Y
Sbjct: 368 SRDVVP-DLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLIPDNVIYTILIQGYCR 422
Query: 289 IGNKDEVYRLWNRIKNLQNCWNS--SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTR 346
G L N + Q C +Y +L L K A+K+ E D+
Sbjct: 423 KGMISVAMNLRNEMLQ-QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 347 IPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQT---- 402
++I +CK G L A QK+ + +LD +++ + G+ D++ A +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 403 MKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEI 440
+ K IL P+P + + L K L A +
Sbjct: 542 VSKEIL-------PTPISYSILVNALCSKGHLAEAFRV 572
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 124/278 (44%), Gaps = 14/278 (5%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEM--KENDLCNGATFTIRLNAYVAAKDVEGMEKLL 227
++ Y+ L+ + ++ L ++M KE + TF + +N + A +VE +K+L
Sbjct: 232 SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRL---AYESLQS 284
M+ + + Y YS NG+ K G +++A K++ VK L+L Y +L +
Sbjct: 292 DFMKKNG-CNPNVYNYSALMNGFCKVGKIQEA----KQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 285 TYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNF 343
+ G DE +L +K + ++ +Y +L L + A ++L +W SE +
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 344 DTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTM 403
+ +++ A C G L+KA ++ + + G ++W+ + E V+ +
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 404 KKAILANRPGWRPSPSTLVACITYLKEKLDLESALEIL 441
+ R G P P + A + + ++ L E+L
Sbjct: 467 IGFL---RIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 122/275 (44%), Gaps = 7/275 (2%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC--NGATFTIRLNAYVAAKDVEGMEKLL 227
T +NIL+K + + G +++EMK + + N T++ ++ A + +L
Sbjct: 196 TCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELF 255
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYA 287
M + + D T++ NG+ +AG VE+A L +++ + Y +L + +
Sbjct: 256 EDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV-YNYSALMNGFC 314
Query: 288 AIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTR 346
+G E + ++ +K ++ Y +++ + + D A K+L E ++ DT
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
Query: 347 IPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKA 406
N+++ G ++A + + G L+ S+ + + ++EKAV+ + +
Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL--S 432
Query: 407 ILANRPGWRPSPSTLVACITYLKEKLDLESALEIL 441
+++ R W P +T + L E E + +L
Sbjct: 433 VMSERGIW-PHHATWNELVVRLCESGYTEIGVRVL 466
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 142/319 (44%), Gaps = 14/319 (4%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLC--NGATFTIRLNAYVAAKDVEGMEKLLMQM 230
+N L+K Y + GK E+ RL+ M +++ N T I + A+ + +E ++ +M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 231 EADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIG 290
++ + D T++T A Y + G+ A + K K ++ + Y G
Sbjct: 487 QSYGVKP-DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEG 545
Query: 291 NKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPN 349
+E R + R+K L N + ++ L ++D DG +++ E D +
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 350 LMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILA 409
++ A+ G + + E +L+ G D ++ +A GY + EKA Q + +
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ---M 662
Query: 410 NRPGWRPSPSTLVACITYLKEKLDLESALEIL-KLCKEDG-HIKITTYDGLVSYAHGEIP 467
+ G RP+ I+ +++ A+++ K+C G +TTY+ L+ + GE
Sbjct: 663 RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI-WGFGEAK 721
Query: 468 DK-EALDLMKRDYQMDGKN 485
+A +L+K M+GKN
Sbjct: 722 QPWKAEELLK---DMEGKN 737
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 12/240 (5%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNG-ATFTIRLNAYVAAKDVEGMEKLLM 228
+ +N +L Y Q GK+E+ L++EM++ + G T+ I + Y + L+
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKS--EQSVKGKKLRLAYESLQSTY 286
+ME + T D +T++ +G + G +AL +K V ++ S S
Sbjct: 307 KMETFGI-TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 287 AAIGNKDEVYRLWNRIKNLQNCW-NSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDT 345
I EV+ + ++ + + +S + M S KL+D A K+ KN D
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED---ARKVF----DSVKNKDV 418
Query: 346 RIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405
N MIT YC+ G KA ++ D+ + + +W+ M +GY + D +A+ ++
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 238 VDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR---LAYESLQSTYAAIGNKDE 294
++ Y ++ N + K GN+ A +K + + L+ +++ +L + Y +GN DE
Sbjct: 238 LNVYVFNILMNKFCKEGNISDA----QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 295 VYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMIT 353
+RL ++++ + + +Y ++++L K + DGA + E + I +I
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 354 AYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPG 413
+ + G +D + QK+L G + D ++ + G+ + D+ A + I R G
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI---RRG 410
Query: 414 WRPSPSTLVACITYLKEKLDLESALEILKLCKEDG 448
RP T I D+E+ALEI K ++G
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 144/317 (45%), Gaps = 15/317 (4%)
Query: 170 TVCYNILLKLYAQKGKYEK----LDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEK 225
T YN L+K Y GK E+ LD +++E + N TF + + A+ K VE +
Sbjct: 150 TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALA-ALKKSEQSVKGKKLRLAYESLQS 284
++ +ME + D TY+T A Y++ G +A + ++K K K +
Sbjct: 210 VVKKME-ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVG 268
Query: 285 TYAAIGNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNF 343
Y G + R R+K ++ N + +++ +++ D DG +++L + +
Sbjct: 269 GYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKA 328
Query: 344 DTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTM 403
D + ++ A+ G ++KA ++++ +G K D ++ +A GY + +KA + +
Sbjct: 329 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
Query: 404 KKAILANRPGWRPSPSTLVACITYLKEKLDLESALEIL-KLCKEDGHIKITTYDGLV-SY 461
+ I+ + RP+ I+ ++ A+ + K+CK I T++ L+ Y
Sbjct: 389 ETLIVES----RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 462 AHGEIP--DKEALDLMK 476
+ P +E L +M+
Sbjct: 445 LEVKQPWKAEEVLQMMR 461
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 117/269 (43%), Gaps = 27/269 (10%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNG--ATFTIRLNAYVAAKDVEGMEKLLM 228
V YN L++ + + + K + +++K +C+ T+T ++ Y A + LL
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL- 300
Query: 229 QMEADPMATVDWY----TYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLA------ 278
D M + Y T++ +GY KAG + A + ++GK +
Sbjct: 301 ----DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA--------EEIRGKMISFGCFPDVV 348
Query: 279 -YESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEW 336
+ SL Y +G + +RLW + N+ +Y ++++L + A ++L +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 337 ESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDM 396
S+ + N +I +CK G +++A ++++ K D ++ + G+ M M
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 397 EKAVQTMKKAILANRPGWRPSPSTLVACI 425
+AV K + + + S+L++C+
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 117/269 (43%), Gaps = 27/269 (10%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNG--ATFTIRLNAYVAAKDVEGMEKLLM 228
V YN L++ + + + K + +++K +C+ T+T ++ Y A + LL
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL- 300
Query: 229 QMEADPMATVDWY----TYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLA------ 278
D M + Y T++ +GY KAG + A + ++GK +
Sbjct: 301 ----DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA--------EEIRGKMISFGCFPDVV 348
Query: 279 -YESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEW 336
+ SL Y +G + +RLW + N+ +Y ++++L + A ++L +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 337 ESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDM 396
S+ + N +I +CK G +++A ++++ K D ++ + G+ M M
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 397 EKAVQTMKKAILANRPGWRPSPSTLVACI 425
+AV K + + + S+L++C+
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 165 RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKEND-LCNGATFTIRLNAYVAAKDVEGM 223
RP +T YN++LK + + G E L + ++END L + ++ I L V
Sbjct: 288 RPNSIT--YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 224 EKLLMQMEADPMATVDWYTYSTAANGYLKAGNVE--KALAALKKSEQSVKGKKLRLAYES 281
E +L QM D Y+Y+ +G K G + K + L K + Y
Sbjct: 346 ETVLKQM-TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA---VTYGC 401
Query: 282 LQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYIC--MLSSLLKLDDFDGAEKILAEWESE 339
L Y ++G D L + NC ++Y C +L SL K+ AE++L + +
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMR-NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 340 HKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSS 382
DT N+++ C G LDKA ++ G ++ GS+
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVK-----GMRVHGSA 498
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 11/274 (4%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQME 231
YNIL+ ++GK E + E + L N ++ + AY +K+ + KLL+QM
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM- 406
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKAL-AALKKSEQSVKGKKLRLAYESLQSTYAAIG 290
A+ D TY +G + +G+++ A+ +K ++ V Y L S G
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAA--IYNMLMSGLCKTG 464
Query: 291 NKDEVYRLWNRIKNLQNCWNSSYI--CMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIP 348
L++ + + +N +Y+ ++ ++ DFD A K+ + + D
Sbjct: 465 RFLPAKLLFSEMLD-RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 349 NLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAIL 408
N MI +C+ G+LD+A A + ++ + D ++ + GY DM A++ +
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR---Y 580
Query: 409 ANRPGWRPSPSTLVACITYLKEKLDLESALEILK 442
+ +P+ T + I + D + A E K
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 137/317 (43%), Gaps = 38/317 (11%)
Query: 166 PMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEK 225
P +V YN ++ Y + G++E +L EM E DL ++ + + YV +++ +
Sbjct: 91 PRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL---VSWNVMIKGYVRNRNLGKARE 147
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285
L + M D +++T +GY + G V+ A + + + K +++ +L S
Sbjct: 148 LF-----EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE-----KNDVSWNALLSA 197
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDT 345
Y +E L+ K+ +N S+ C+L +K A + D
Sbjct: 198 YVQNSKMEEACMLF---KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DV 250
Query: 346 RIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405
N +IT Y + G +D+A ++L D D +W M +GY + +E+A + K
Sbjct: 251 VSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 406 AILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLVS-YAH- 463
N W + V E++++ L + C+ ++T++ +++ YA
Sbjct: 307 MPERNEVSWNAMLAGYVQ-----GERMEMAKELFDVMPCR-----NVSTWNTMITGYAQC 356
Query: 464 GEIPD-KEALDLM-KRD 478
G+I + K D M KRD
Sbjct: 357 GKISEAKNLFDKMPKRD 373
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 20/287 (6%)
Query: 172 CYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA--TFTIRLNAYVA-AKDVEGMEKL-- 226
CYN LL A+ G E++ RL EM E DL + TF +N Y VE + +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLE-DLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 227 LMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTY 286
L+Q DP D++TY++ G+ + V+ A K+ Q+ + ++Y L
Sbjct: 181 LIQAGCDP----DYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGL 235
Query: 287 AAIGNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDT 345
DE L ++K+ C N +Y ++ +L A + + D
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 346 RIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405
+ ++I ++C LD+A ++ +L++G + +++ + G+ N + KA+ + K
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSK 354
Query: 406 AILANRPGWRPSPSTLVA--CITYLKEKLDLESALEILKLCKEDGHI 450
+ N + +TL+A C +L+SA +L L +E G +
Sbjct: 355 MLEQNLVPDLITYNTLIAGQC-----SSGNLDSAYRLLSLMEESGLV 396
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 117/260 (45%), Gaps = 11/260 (4%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEM-KENDLCNGATFTIRLNAYVAAKDVEGMEKLLM 228
+ YNILL+ +GK+E+ ++LM +M E N T++I + +E LL
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR--LAYESLQSTY 286
M+ + T D Y+Y + + G ++ A+ L E + L + Y ++ +T
Sbjct: 358 LMKEKGL-TPDAYSYDPLIAAFCREGRLDVAIEFL---ETMISDGCLPDIVNYNTVLATL 413
Query: 287 AAIGNKDEVYRLWNRIKNLQNCWNSS-YICMLSSLLKLDDFDGAEKILAEWESEHKNFDT 345
G D+ ++ ++ + NSS Y M S+L D A ++ E S + D
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 346 RIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405
N MI+ C+ G++D+A + + +++ + G+ + +E A+ + +
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL-E 532
Query: 406 AILANRPGWRPSPSTLVACI 425
+++ N G RP+ +T I
Sbjct: 533 SMVGN--GCRPNETTYTVLI 550
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 170 TVCYNILLKLYAQKGKYE-KLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLM 228
TV YNI++ +GK + L L Q + +N T+TI + A + V+ KL+
Sbjct: 193 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAA 288
+M + + D +TY+T G K G V++A ++ E +KG +
Sbjct: 253 EMLSRGLKP-DMFTYNTIIRGMCKEGMVDRAFEMVRNLE--LKGCE-------------- 295
Query: 289 IGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIP 348
D + SY +L +LL ++ EK++ + SE + +
Sbjct: 296 ---PDVI----------------SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 349 NLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAI 407
+++IT C+ G +++A ++ + + G D S+D + A + + ++ A++ ++ I
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 141/316 (44%), Gaps = 12/316 (3%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQME 231
+NIL+ G + L +M ++ + + T+ I + + G +++ M
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM- 318
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR--LAYESLQSTYAAI 289
D + D TY+ G + GN++ L LK + +G +L + + S
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK--DMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 290 GNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIP 348
G DE L+N++K + +Y ++ L KL FD A + E + ++R
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 349 NLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAIL 408
++ C++G+L +A + + L+ SG+ LD ++ + GY +E+A++ K I
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI- 495
Query: 409 ANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHI-KITTYDGLVSYAHGEIP 467
G PS +T + I + ++ A +IL + K G + +Y L+ A+
Sbjct: 496 --ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD-AYANCG 552
Query: 468 DKEALDLMKRDYQMDG 483
+ +++D ++R+ + +G
Sbjct: 553 NTKSIDELRREMKAEG 568
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 141/316 (44%), Gaps = 12/316 (3%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQME 231
+NIL+ G + L +M ++ + + T+ I + + G +++ M
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM- 318
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR--LAYESLQSTYAAI 289
D + D TY+ G + GN++ L LK + +G +L + + S
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK--DMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 290 GNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIP 348
G DE L+N++K + +Y ++ L KL FD A + E + ++R
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 349 NLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAIL 408
++ C++G+L +A + + L+ SG+ LD ++ + GY +E+A++ K I
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI- 495
Query: 409 ANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHI-KITTYDGLVSYAHGEIP 467
G PS +T + I + ++ A +IL + K G + +Y L+ A+
Sbjct: 496 --ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD-AYANCG 552
Query: 468 DKEALDLMKRDYQMDG 483
+ +++D ++R+ + +G
Sbjct: 553 NTKSIDELRREMKAEG 568
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLM 228
TV Y L+ +Y ++G E+ RL EM + N T+ + + AY ++ KL
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKG-KKLRLAYESLQSTYA 287
MEA+ M D YTY++ +G A NV++A+ SE +KG + + Y + S +
Sbjct: 529 NMEANGMDP-DSYTYTSLIHGECIADNVDEAMRLF--SEMGLKGLDQNSVTYTVMISGLS 585
Query: 288 AIGNKDEVYRLWNRIK 303
G DE + L++ +K
Sbjct: 586 KAGKSDEAFGLYDEMK 601
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 175 ILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLMQMEAD 233
I+++ ++G+ EK +L++E + A T+ +NAYV +D G+E +L M+ D
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 234 PMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRL-AYESLQSTYAAIGNK 292
+ + TY+ +K G + A E +G + + Y SL S GN
Sbjct: 289 GVV-YNKVTYTLLMELSVKNGKMSDAEKLF--DEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 293 DEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLM 351
+ L++ + +S +Y ++ + K+ + AE ++ E +S+ N + N +
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 352 ITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYH 391
I YC++G++D+A + G + D + + +A+ ++
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEKLLMQME 231
YNIL+ + + +D +M+E+K++ N T+T L Y K +E +L ++M+
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGN 291
+ T D + + +K G E+A + + +S + ++Y +L + Y GN
Sbjct: 251 KEGY-TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 292 KDEVYRLWNRI--KNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPN 349
D V L I K L+ + ++ +++ LL + + GAEK LA N
Sbjct: 310 LDAVDDLLEEIEMKGLKP-DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCN 368
Query: 350 LMITAYCKRGLLDKA 364
+I CK G +D+A
Sbjct: 369 CLIDGLCKAGHVDRA 383
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 140/345 (40%), Gaps = 9/345 (2%)
Query: 81 RFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDK--RGFKIY 138
R+ A+QV E + + Y + G+ K I ++ K +KA + FQ + ++ ++Y
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 139 ASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTV-CYNILLKLYAQKGKYEKLDRLMQEMK 197
+L+S Y+ V Y+IL+K + Q ++K+ L+ +M+
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 198 ENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNV 256
+ N T+ ++AY AK ME L+QM + D +T ++ + G +
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 257 EKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWN-SSYIC 315
E +K + S +R + L +Y GN ++ + ++ W +Y
Sbjct: 309 EMMENCYEKFQSSGIEPNIR-TFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 316 MLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSG 375
++ + + D E + +SE ++ AY + DK ++ + +S
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 376 KKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPST 420
+LD ++ + Y MEK + L + G++P T
Sbjct: 428 IRLDLVFFNCLVDAY---GRMEKFAEMKGVLELMEKKGFKPDKIT 469
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 164 LRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEG 222
+RP H YNILL +A G E+ + + M+ + + ++T L+AYV A D+EG
Sbjct: 345 VRPTH--KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 402
Query: 223 MEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKK 265
EK +++ D + TY T GY KA +VEK + +K
Sbjct: 403 AEKFFKRIKVDGFEP-NIVTYGTLIKGYAKANDVEKMMEVYEK 444
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 164 LRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEG 222
+RP H YNILL +A G E+ + + M+ + + ++T L+AYV A D+EG
Sbjct: 352 VRPTH--KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 409
Query: 223 MEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKK 265
EK +++ D + TY T GY KA +VEK + +K
Sbjct: 410 AEKFFKRIKVDGFEP-NIVTYGTLIKGYAKANDVEKMMEVYEK 451
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQ--M 230
YN+L+ ++ G EK ++L+ EM+E + FT V K E L +Q M
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPD-IFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 231 EADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIG 290
E +A + TY++ +G+ + G + +A ++ + V + Y +L Y +
Sbjct: 265 ERSGVAP-NIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN--HVTYTTLIDGYCRMN 321
Query: 291 NKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDG----AEKILAEWESEHKNFDTR 346
+ DE RL +++ ++ + S L KL + DG A ++L E + D
Sbjct: 322 DIDEALRLREVMES--RGFSPGVVTYNSILRKLCE-DGRIREANRLLTEMSGKKIEPDNI 378
Query: 347 IPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKA 406
N +I AYCK + A +K+++SG KLD S+ + G+ ++E A + +
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 407 ILANRPGWRPSPST 420
I G+ P +T
Sbjct: 439 I---EKGFSPGYAT 449
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 150/374 (40%), Gaps = 39/374 (10%)
Query: 42 KSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTH--ALQVSEWMSNERNYD 99
KSGDP +L++ E G LI+ Y ++ H AL V + M ER
Sbjct: 215 KSGDPEKA-EKLLSEMEEKGVFPDIFTYNTLIS--VYCKKSMHFEALSVQDRM--ER--- 266
Query: 100 LSSGLIAKRIHLISKVHG------LKKAEDFFQGIPDDKRGFKI-YASLLSCYAEHKSLX 152
SG+ + S +HG +++A F+ I DD + Y +L+ Y +
Sbjct: 267 --SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDID 324
Query: 153 XXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMK------ENDLCNGAT 206
V YN +L+ + G+ + +RL+ EM +N CN
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL- 383
Query: 207 FTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKS 266
+NAY +D+ K+ +M + +D Y+Y +G+ K +E A K+
Sbjct: 384 ----INAYCKIEDMVSAVKVKKKMIESGLK-LDMYSYKALIHGFCKVLELENA----KEE 434
Query: 267 EQSVKGKKLRLAYES---LQSTYAAIGNKDEVYRLWNRIKNLQNCWNSS-YICMLSSLLK 322
S+ K Y + L + +DE+ +L + C + + Y ++ + K
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK 494
Query: 323 LDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSS 382
L+ D A+ + E + D+ I M AY + G + +A A + + ++
Sbjct: 495 LEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKL 554
Query: 383 WDRMAAGYHMDNDM 396
+ ++A Y DND+
Sbjct: 555 YKSISASYAGDNDV 568
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 310 NSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQ 369
+SS+ M+S D D K+LA + N N+ I + CKR +A+A +
Sbjct: 222 SSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLD 281
Query: 370 KLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLK 429
+L +G K + ++ + G+ ++D E+A + K I+ NR G +P I YL
Sbjct: 282 GMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK--IMVNR-GCKPDSECYFTLIYYLC 338
Query: 430 EKLDLESALEILKLCKE 446
+ D E+AL LCKE
Sbjct: 339 KGGDFETALS---LCKE 352
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 125/290 (43%), Gaps = 21/290 (7%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRL-MQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLM 228
+C+N+L+ Y QK +Y++ + L +Q ++ + T+ + + AY A +E E +L+
Sbjct: 177 VICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 236
Query: 229 QMEADPMA--TVDWYTYSTAANGYLK-AGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285
+M+ ++ T+ Y+ G +K GN E+A+ Q +K + + E+
Sbjct: 237 EMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF----QRMKRDRCKPTTETYNLM 292
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDG----AEKILAEWESEHK 341
G + Y W +++ IC ++L+ +G AE+I + + +
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 342 NFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGY---HMDNDMEK 398
D + N ++ +Y + G A + G + D +S++ M Y + +D E
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 399 AVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDG 448
+ MK R G P+ + + ++ + D+ I+K E+G
Sbjct: 413 VFEEMK------RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 10/215 (4%)
Query: 170 TVCYNIL----LKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEK 225
CYNIL LK K E DRL+++ + N T I ++ V+ K
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLED--SSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285
+ +M+ + D YTYS+ +G AGNV+KA + + ++ K + Y ++
Sbjct: 277 IWERMKQNEREK-DLYTYSSLIHGLCDAGNVDKAESVFNELDER-KASIDVVTYNTMLGG 334
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
+ G E LW RI +N N SY ++ LL+ D A I ++ D
Sbjct: 335 FCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLD 379
+ I C G ++KA +Q++ SG LD
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 125/290 (43%), Gaps = 21/290 (7%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRL-MQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLM 228
+C+N+L+ Y QK +Y++ + L +Q ++ + T+ + + AY A +E E +L+
Sbjct: 155 VICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLV 214
Query: 229 QMEADPMA--TVDWYTYSTAANGYLK-AGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285
+M+ ++ T+ Y+ G +K GN E+A+ Q +K + + E+
Sbjct: 215 EMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF----QRMKRDRCKPTTETYNLM 270
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDG----AEKILAEWESEHK 341
G + Y W +++ IC ++L+ +G AE+I + + +
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 342 NFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGY---HMDNDMEK 398
D + N ++ +Y + G A + G + D +S++ M Y + +D E
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 399 AVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDG 448
+ MK R G P+ + + ++ + D+ I+K E+G
Sbjct: 391 VFEEMK------RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 31/302 (10%)
Query: 173 YNILLKLYAQKGK-YEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLL--MQ 229
+N+++ + ++ K +E L + +K N +F + ++ D+ +LL M
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 230 MEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAI 289
M + + + TY++ NG+ KAG ++ A + ++G ++ + + TY A+
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLA--------ERIRGDMVKSGVDCNERTYGAL 332
Query: 290 -------GNKDEVYRLWNRIKNLQNCWNSS-YICMLSSLLKLDDFDGAEKILAEWESEHK 341
G+ DE RL + + + N+ Y ++ L D +GA +L + S++
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Query: 342 NFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKL--DGSSWDRMAAGYHMDNDMEKA 399
D +++ C+ G + +A + +++ S KKL D + + + D + A
Sbjct: 393 QIDRFTQAIVVRGLCRNGYVKEAVEFQRQI--SEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 400 VQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLV 459
Q + ++ S TL+ YLKE LE ALEI DG IK+ LV
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLID--GYLKEG-KLERALEIY-----DGMIKMNKTSNLV 502
Query: 460 SY 461
Y
Sbjct: 503 IY 504
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 42/365 (11%)
Query: 69 LQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISK-VHGLKKAEDFFQG 127
L ++I R AL+V M + +S LI ISK + +A F
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG-----ISKDPSRMMEAHQLFDE 118
Query: 128 IPD-DKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKY 186
IP+ D + I +LSCY + + P +N ++ YA++G+
Sbjct: 119 IPEPDTFSYNI---MLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEM 171
Query: 187 EKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTA 246
EK L M E N ++ ++ Y+ D+E + P+ V ++
Sbjct: 172 EKARELFYSMMEK---NEVSWNAMISGYIECGDLEKASHFF---KVAPVRGV--VAWTAM 223
Query: 247 ANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQ 306
GY+KA VE A A K + K + + ++ S Y ++ +L+ +
Sbjct: 224 ITGYMKAKKVELAEAMFK----DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 307 NCWNSSYICMLSSLLKLDDFDGAE------KILAEWESEHKNFDTRIPNLMITAYCKRGL 360
NSS + S+LL + + +I+++ S N T + +L I+ YCK G
Sbjct: 280 IRPNSSGLS--SALLGCSELSALQLGRQIHQIVSK--STLCNDVTALTSL-ISMYCKCGE 334
Query: 361 LDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILAN-RPGWRPSPS 419
L A KL + KK D +W+ M +GY + +KA+ ++ I RP W +
Sbjct: 335 LGDA----WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 420 TLVAC 424
L+AC
Sbjct: 391 VLLAC 395
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 12/345 (3%)
Query: 72 LITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDD 131
L L ++ L+V WM +R Y +G+ +K I ++ K + A F + +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 132 --KRGFKIYASLLSCYA----EHKSLXXXXXXXXXXXXL-RPMHLTVCYNILLKLYAQKG 184
+ +Y +L++ + + K+L + R V YNILL+ +AQ G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 185 KYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTY 243
K ++++ L +++ + + TF ++AY ++ ME +L +M ++ D T+
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE-CKPDIITF 281
Query: 244 STAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIK 303
+ + Y K EK K +S K K + S+ Y D+ ++ ++
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRS-KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 304 NLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLD 362
++ + +Y CM+ A +I E + N M+ YC+ GL
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYI 400
Query: 363 KAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAI 407
+A+ D S++ + Y DM++ VQ + K +
Sbjct: 401 EADKLFHNASAFRVHPDASTYKFLYKAY-TKADMKEQVQILMKKM 444
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 150/358 (41%), Gaps = 19/358 (5%)
Query: 112 ISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTV 171
+ K+ + A+D F IP K I+ +L+ + H L + V
Sbjct: 332 LCKIGRVDAAKDLFYRIP--KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 172 C-YNILLKLYAQKGKYEKLDRLMQEMKENDLC--NGATFTIRLNAYVAAKDVEGMEKLLM 228
C YN L+ Y ++G ++ +M+ N C N ++TI ++ + ++ +L
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAA 288
+M AD + + ++ + + K + +A+ + E KG K + + S +
Sbjct: 449 EMSADGLKP-NTVGFNCLISAFCKEHRIPEAVEIFR--EMPRKGCKPDVY--TFNSLISG 503
Query: 289 IGNKDEV-YRLW---NRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
+ DE+ + LW + I +Y ++++ L+ + A K++ E + D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
N +I C+ G +DKA + +K+L G S + + G +E+AV+ K
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 405 KAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKIT-TYDGLVSY 461
+ +L G P T + I L +E L + + + +G T T++ L+S+
Sbjct: 624 EMVLR---GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 118/267 (44%), Gaps = 19/267 (7%)
Query: 170 TVCYNILLKLYAQKGKYEK----LDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEK 225
T+ YN L+ + ++ + E+ +D ++ + + D+ TF I +N Y A ++ +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI---MTFNILINGYCKANRIDDGLE 424
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR---LAYESL 282
L +M + + TY+T G+ ++G +E A KK Q + +++R ++Y+ L
Sbjct: 425 LFREMSLRGV-IANTVTYNTLVQGFCQSGKLEVA----KKLFQEMVSRRVRPDIVSYKIL 479
Query: 283 QSTYAAIGNKDEVYRLWNRI-KNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHK 341
G ++ ++ +I K+ Y+ ++ + D A + +
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 342 NFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQ 401
D R N+MI+ C++ L KA+ +K+ + G D +++ + + D+D A +
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 402 TMKKAILANRPGWRPSPSTLVACITYL 428
+++ G+ ST+ I L
Sbjct: 600 LIEE---MKSSGFPADVSTVKMVINML 623
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 145/362 (40%), Gaps = 18/362 (4%)
Query: 81 RFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYA- 139
R+ +Q+ EWM +++ +S + I + + KA + +Q IPD+ +Y
Sbjct: 113 RWQDLIQLFEWM--QQHGKISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYIC 169
Query: 140 -SLLSCYAEHKSLXXXXXXXXXXXX--LRPMHLTVCYNILLK-LYAQKGKYEKLDRLMQE 195
S+LSC ++ L L+P V YN LL K Y K L+ E
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPD--VVTYNTLLAGCIKVKNGYPKAIELIGE 227
Query: 196 MKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAG 254
+ N + + + L + E E + QM+ + + + Y YS+ N Y G
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSP-NIYHYSSLLNSYSWKG 286
Query: 255 NVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYI 314
+ +KA L +S+ ++ +L Y G D L + +++ N
Sbjct: 287 DYKKA-DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 315 CML-SSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLD 373
CML L K + A I + + + D ++MI+A C+ +A+ +
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 374 SGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITY-LKEKL 432
+ +K D + M Y +ME ++ MKK + P +T I Y +KEKL
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK---MDEQAVSPDYNTFHILIKYFIKEKL 462
Query: 433 DL 434
L
Sbjct: 463 HL 464
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/306 (18%), Positives = 125/306 (40%), Gaps = 28/306 (9%)
Query: 106 AKRIHLISKVHGLKKAEDFF-QGIPDDKRGFKIYASLLSCYAEHKSLXXXXXXXXXXXXL 164
K +H++S+ ++ + + + + + GF ++ L+ + E
Sbjct: 108 CKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFS--------------F 153
Query: 165 RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGME 224
P ++++LK+YA+KG + + M G ++ + + V E
Sbjct: 154 SP----TVFDMILKVYAEKGLVKNALHVFDNMGNY----GRIPSLLSCNSLLSNLVRKGE 205
Query: 225 KLLMQMEADPMATV----DWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYE 280
+ D M + D +T S N Y ++GNV+KA+ K++E S+ + + Y
Sbjct: 206 NFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 281 SLQSTYAAIGNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKILAEWESE 339
SL + YA IG+ + + R+ + N +Y ++ K + AE + + +
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 340 HKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKA 399
D + +++ YC+ G + A +++ G + + + + + GY + +A
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 400 VQTMKK 405
Q +
Sbjct: 386 EQIFSR 391
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 151/370 (40%), Gaps = 15/370 (4%)
Query: 47 RTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIA 106
R P+ L+++V+ + L L ++ L+V WM +R Y +G+ +
Sbjct: 81 REPLVKTLDKYVKV---VRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYS 137
Query: 107 KRIHLISKVHGLKKAEDFFQGIPDD--KRGFKIYASLLSCYA----EHKSLXXXXXXXXX 160
K I ++ K + A F + + + +Y +L++ + + K+L
Sbjct: 138 KLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDK 197
Query: 161 XXXL-RPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAK 218
+ R V YNILL+ +AQ GK ++++ L +++ + + TF ++AY
Sbjct: 198 MKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNG 257
Query: 219 DVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLA 278
++ ME +L +M ++ D T++ + Y K EK K +S K K
Sbjct: 258 MIKEMEAVLTRMRSNE-CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS-KEKPTLPT 315
Query: 279 YESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWE 337
+ S+ Y D+ ++ ++ ++ + +Y CM+ A +I E
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 338 SEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDME 397
+ N M+ YC+ GL +A+ D S++ + Y DM+
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY-TKADMK 434
Query: 398 KAVQTMKKAI 407
+ VQ + K +
Sbjct: 435 EQVQILMKKM 444
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 203 NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAA 262
N T+T ++ Y+ +K + E L +M P V +++T +GY ++G ++KAL
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEM---PERNV--VSWNTMIDGYAQSGRIDKALEL 162
Query: 263 LKK-SEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLL 321
+ E+++ +++ S+ G DE L+ R+ S+ M+ L
Sbjct: 163 FDEMPERNI------VSWNSMVKALVQRGRIDEAMNLFERMPRRDVV---SWTAMVDGLA 213
Query: 322 KLDDFDGAEKILAEWESEHKNFDTRIP-------NLMITAYCKRGLLDKAEAYIQKLLDS 374
K D A ++ FD +P N MIT Y + +D+A+ Q + +
Sbjct: 214 KNGKVDEARRL----------FDC-MPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 375 GKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDL 434
D +SW+ M G+ + +M KA + N W IT E +
Sbjct: 263 ----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISW-------TTMITGYVENKEN 311
Query: 435 ESALEILKLCKEDGHIK--ITTYDGLVS 460
E AL + DG +K + TY ++S
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILS 339
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 129/304 (42%), Gaps = 20/304 (6%)
Query: 164 LRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEG 222
+RP +T YN L++ G++ RL+ +M E + N TF+ ++A+V +
Sbjct: 286 IRPNVVT--YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 223 MEKL---LMQMEADPMATVDWYTYSTAANGYLKAGNVEKA--LAALKKSEQSVKGKKLRL 277
EKL +++ DP D +TYS+ NG+ +++A + L S+ +
Sbjct: 344 AEKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV---V 396
Query: 278 AYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEW 336
Y +L + +E L+ + N+ +Y ++ L + D D A+KI +
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 337 ESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDM 396
S+ D ++++ CK G L+KA + L S + D +++ M G +
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 397 EKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKIT-TY 455
E L G +P+ I+ K E A + + KEDG + + TY
Sbjct: 517 EDGWDLFCSLSL---KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 456 DGLV 459
+ L+
Sbjct: 574 NTLI 577
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 131/310 (42%), Gaps = 15/310 (4%)
Query: 138 YASLLSCYAEHKSLXXXXXXXXXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMK 197
+++L+ C+ + L TV Y L+ + ++ + +K + ++ M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 198 ENDLC--NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGN 255
C N TF I +N Y A ++ +L +M + D TY+T G+ + G
Sbjct: 380 SKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGK 437
Query: 256 VEKALAALKKSEQSVKGKKLR---LAYESLQSTYAAIGNKDEVYRLWNRI-KNLQNCWNS 311
+E A K+ Q + +++R ++Y+ L G ++ ++ +I K+
Sbjct: 438 LEVA----KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 312 SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKL 371
Y ++ + D A + + D + N+MI CK+G L +A+ +K+
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 372 LDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEK 431
+ G +G +++ + + + D K+ + +++ R G+ ST+ + L +
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE---IKRCGFSVDASTVKMVVDMLSDG 610
Query: 432 LDLESALEIL 441
+S L++L
Sbjct: 611 RLKKSFLDML 620
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 43/330 (13%)
Query: 168 HLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLL 227
H TV YN L++ A+ + ++ EMK A + + L+ Y+ K +K
Sbjct: 261 HSTVTYNAALRVLARPNSVAEFWSVVDEMK------TAGYDMDLDTYI--KVSRQFQKSR 312
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAG-----------------NVEKALAALKKSEQSV 270
M E TV Y Y +G K +++ +K E +
Sbjct: 313 MMAE-----TVKLYEY--MMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYEST- 364
Query: 271 KGKKL-RLAYESLQSTYAAIGNKDEVYRLWNRIKNL-QNCWNSSYICMLSSLLKLDDFDG 328
GK L + Y+ + + ++G DE + ++N N +Y ++ L K +
Sbjct: 365 -GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEE 423
Query: 329 AEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAA 388
A +L + E++ D + ++I +CK LDKA A +L+ G +D + D +
Sbjct: 424 ARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLID 483
Query: 389 GYHMDNDMEKA-VQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKED 447
G+ + N E A + M+ AN W+ + L+ + +K+ E AL++L++ K+
Sbjct: 484 GFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKS---EEALDLLQMMKKQ 540
Query: 448 GHIKIT-TYDGLVSYAHGEIPD-KEALDLM 475
+ +DG ++ G + D K+ LD++
Sbjct: 541 NYPAYAEAFDGYLA-KFGTLEDAKKFLDVL 569
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 16/187 (8%)
Query: 244 STAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNR-I 302
+T + Y K G E +A +K + K R++Y S+ S YA G +E + ++ R +
Sbjct: 222 NTLLDAYAKGG--EGGVAVARKIFDQIVDKD-RVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 303 KNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNF----DTRIPNLMITAYCKR 358
KN +N+ LS++L GA +I + D + +I YCK
Sbjct: 279 KNKVVTFNA---ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 359 GLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILAN-RPGWRPS 417
G ++ A +K D K + SW M AGY M KA++ I + RP +
Sbjct: 336 GRVETA----RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 418 PSTLVAC 424
S L AC
Sbjct: 392 VSVLAAC 398
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 132/334 (39%), Gaps = 55/334 (16%)
Query: 168 HLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLL 227
H + YN ++ + A+ ++E + +++EM L TFTI + A+ AAK+ + +
Sbjct: 193 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKS----EQSVKGKKLRLAYESLQ 283
M+ Y + + L +L ++ E V KL+ +
Sbjct: 253 ELMKK--------YKFKIGVE------TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298
Query: 284 STYAAIGNKDEVYRLWNRIKNL---QNCWNS-----------SYICMLSSLLKLDDFDGA 329
TY + N W R++NL WN ++ ML LL+ A
Sbjct: 299 MTYTVLLNG------WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 330 EKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAG 389
K+ +S+ + R +MI +CK+ ++ A Y ++DSG + D + + + G
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 390 YHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEIL-KLCKEDG 448
+ ++ + +K+ P P T A I + + E A I K+ + +
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHP---PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 449 HIKITTYDGLV-SYAHGEIPDKEALDLMKRDYQM 481
I T++ ++ SY M R+Y+M
Sbjct: 470 EPSIHTFNMIMKSY------------FMARNYEM 491
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 19/268 (7%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAA-----KDVEGME 224
V N L+ + + G+ E+L + EM + + N + A V +
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEM---GMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Query: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKG-KKLRLAYESLQ 283
+M+AD ++ + +TYS +GY K VEKAL L++ ++ KG AY SL
Sbjct: 395 SWFDKMKADSVSPSE-FTYSILIDGYCKTNRVEKALLLLEEMDE--KGFPPCPAAYCSLI 451
Query: 284 STYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKN 342
+ + L+ +K N N + Y M+ K A + E +++
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 343 FDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQT 402
D N +++ K G++++A + ++K+ ++G + D +S + + G+ +A++
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 403 MKKAILANRPGWRP---SPSTLVACITY 427
+ G +P + +TL+ C +
Sbjct: 572 FET---IKHSGIKPDGVTYNTLLGCFAH 596
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 132/309 (42%), Gaps = 9/309 (2%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLMQ 229
V YN L+K Y ++G + + + EM + L T+T +++ A ++ + L Q
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 230 MEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAI 289
M + + TY+T +G+ + G + +A L++ + + + Y +L + +
Sbjct: 371 MRVRGLCP-NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV-VTYNALINGHCVT 428
Query: 290 GNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIP 348
G ++ + +K + SY +LS + D D A ++ E + DT
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 349 NLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAIL 408
+ +I +C++ +A +++L G D ++ + Y M+ D+EKA+Q + +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV- 547
Query: 409 ANRPGWRPSPSTLVACITYL-KEKLDLESALEILKLCKEDGHIKITTYDGLVSYAHGEIP 467
G P T I L K+ E+ +LKL E+ TY L+ I
Sbjct: 548 --EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC-SNIE 604
Query: 468 DKEALDLMK 476
K + L+K
Sbjct: 605 FKSVVSLIK 613
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMK-ENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQME 231
YN LL + G+ + ++ +M + + N +++ ++ + A + L +M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 232 ADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGN 291
+A +D +Y+T + Y K G E+AL L++ SV KK + Y +L Y G
Sbjct: 437 YLGIA-LDRVSYNTLLSIYTKVGRSEEALDILREM-ASVGIKKDVVTYNALLGGYGKQGK 494
Query: 292 KDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNL 350
DEV +++ +K N +Y ++ K + A +I E++S D + +
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 351 MITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKA 399
+I A CK GL+ A + I ++ G + +++ + + M+++
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMK----ENDLCNGATFTIRLNAYVAAKDVEGMEKL 226
+ +N LL + ++ G +E L EM E D+ ++ L+A ++ ++
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF---SYNTLLDAICKGGQMDLAFEI 396
Query: 227 LMQMEADPMATV--DWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKL-RLAYESLQ 283
L QM P+ + + +YST +G+ KAG ++AL E G L R++Y +L
Sbjct: 397 LAQM---PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF--GEMRYLGIALDRVSYNTLL 451
Query: 284 STYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKN 342
S Y +G +E + + ++ + +Y +L K +D +K+ E + EH
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV- 510
Query: 343 FDTRIPNL-----MITAYCKRGLLDKAEAYIQKLLDSGKKLD 379
+PNL +I Y K GL +A ++ +G + D
Sbjct: 511 ----LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 55/322 (17%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYV---AAKDVEGMEKL 226
V YN +LK ++KG+ L L+ +MK+N L N T+ + Y + K+ + +L
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 227 LMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTY 286
+ Q P D TY+ NG AG++ + L L + +S+K + + Y +L
Sbjct: 301 MKQTNVLP----DLCTYNILINGLCNAGSMREGLE-LMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 287 AAIGNKDEVYRLWNRIKN-----LQNCWNSS----------------------------- 312
+G E +L +++N Q N S
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 313 ---YICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQ 369
Y ++ + LK+ D GA +++ E + +T N ++ A CK LD+A +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 370 KLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQT---MKKAILANRPGWRPSPSTLVACIT 426
G +D ++ + G+ + +EKA++ MKK + P+ ST + I
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT------PTVSTFNSLIG 529
Query: 427 YLKEKLDLESALEILKLCKEDG 448
L E A+E E G
Sbjct: 530 GLCHHGKTELAMEKFDELAESG 551
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 38/256 (14%)
Query: 168 HLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLL 227
H + YN ++ + A+ ++E + +++EM L TFTI + A+ AAK+ + +
Sbjct: 193 HASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKS----EQSVKGKKLRLAYESLQ 283
M+ Y + + L +L ++ E V KL+ +
Sbjct: 253 ELMKK--------YKFKIGVE------TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 298
Query: 284 STYAAIGNKDEVYRLWNRIKNL---QNCWNS-----------SYICMLSSLLKLDDFDGA 329
TY + N W R++NL WN ++ ML LL+ A
Sbjct: 299 MTYTVLLNG------WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 352
Query: 330 EKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAG 389
K+ +S+ + R +MI +CK+ ++ A Y ++DSG + D + + + G
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 390 YHMDNDMEKAVQTMKK 405
+ ++ + +K+
Sbjct: 413 FGTQKKLDTVYELLKE 428
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 177/442 (40%), Gaps = 48/442 (10%)
Query: 53 ILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWM------SNERNYDLSSGLIA 106
+++Q VE G I LI L + + A+ + + M N Y + +
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 107 KR------IHLISKVHGLKKAED--FFQGIPDDKRGFKIYASLLSCYAEHKSLXXXXXXX 158
KR ++L++K+ K D F I D ++ L+ + E ++
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET-------- 288
Query: 159 XXXXXLRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAA 217
+RP +T Y+ L+ G++ +L+ +M E + N TF ++A+V
Sbjct: 289 ---KGIRPNVVT--YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 218 KDVEGMEKL---LMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKK 274
EKL +++ DP D +TY++ NG+ ++KA K+ + + K
Sbjct: 344 GKFVEAEKLYDDMIKRSIDP----DIFTYNSLVNGFCMHDRLDKA----KQMFEFMVSKD 395
Query: 275 L---RLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAE 330
+ Y +L + ++ L+ + + ++ +Y ++ L D D A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 331 KILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGY 390
K+ + S+ D ++++ C G L+KA + S KLD + M G
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 391 HMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHI 450
++ L G +P+ T I+ L K L+ A +LK KEDG +
Sbjct: 516 CKAGKVDDGWDLFCSLSL---KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 451 KIT-TYDGLVSYAHGEIPDKEA 471
+ TY+ L+ AH DK A
Sbjct: 573 PNSGTYNTLIR-AHLRDGDKAA 593
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 15/278 (5%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC--NGATFTIRLNAYVAAKDVEGMEKLL 227
T+ Y L+ + ++ +K ++++ M C N TF I +N Y A ++ +L
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKG-CDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR---LAYESLQS 284
+M + D TY+T G+ + G + A K+ Q + +K+ + Y+ L
Sbjct: 427 RKMSLRGVVA-DTVTYNTLIQGFCELGKLNVA----KELFQEMVSRKVPPNIVTYKILLD 481
Query: 285 TYAAIGNKDEVYRLWNRI-KNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNF 343
G ++ ++ +I K+ Y ++ + D A + +
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 344 DTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTM 403
+ N+MI CK+G L +AE +K+ + G DG +++ + + D D K+V+ +
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 404 KKAILANRPGWRPSPSTLVACITYLKEKLDLESALEIL 441
++ R G+ ST+ I L + +S L++L
Sbjct: 602 EE---LKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKENDL-CNGATFTIRLNAYVAAKDVEGMEKLLM 228
V YN ++ + + + + EM E L N T++I ++ + KD + ++
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRL---AYESLQST 285
QM A + Y+T NG K G KA L + +K K+ + +Y S+
Sbjct: 544 QMNASNFEA-NEVIYNTIINGLCKVGQTSKAKEML---QNLIKEKRYSMSCTSYNSIIDG 599
Query: 286 YAAIGNKDEVYRLWNRI-KNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
+ +G+ D + + +N ++ ++ +++ K + D A ++ E +S D
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
+I +CK+ + A +L + G + S ++ + +G+ M+ A+ K
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 405 KAI 407
K +
Sbjct: 720 KMV 722
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 13/253 (5%)
Query: 170 TVCYNILLKLYAQ---KGKYEKLDRLMQEMKENDLC-NGATFTIRLNAYVAAKDVEGMEK 225
V YN L+ Y + GK K D +++EM END+ N TF I ++ + ++ G K
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285
+ +M D + +Y++ NG G + +A++ K + L + Y +L +
Sbjct: 318 VFKEM-LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL-ITYNALING 375
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWNSS--YICMLSSLLKLDDFDGAEKILAEWESEHKNF 343
+ E ++ +K Q ++ Y ++ + KL D + E E E
Sbjct: 376 FCKNDMLKEALDMFGSVKG-QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 344 DTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTM 403
D N +I C+ G ++ A+ +L G D ++ + GY + KA +
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLL 493
Query: 404 KKAILANRPGWRP 416
K+ ++ G +P
Sbjct: 494 KE---MSKMGLKP 503
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 104/237 (43%), Gaps = 10/237 (4%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMK----ENDLCNGATFTIRLNAYVAAKDVEGMEK 225
TV YN L+ + + G+ EK + L M E DL T+ + LN Y ++ E
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL---VTYNVLLNYYYDNNMLKRAEG 276
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQST 285
++ +M + +D Y+Y+ + + + +K + K E +G ++Y +L T
Sbjct: 277 VMAEMVRSGI-QLDAYSYNQLLKRHCRVSHPDKCYNFMVK-EMEPRGFCDVVSYSTLIET 334
Query: 286 YAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
+ N + YRL+ ++ N +Y ++ + L+ + A+K+L + + D
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQ 401
++ CK G +DKA +++ D S++ + +G + +A++
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIK 451
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 38/256 (14%)
Query: 168 HLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEKLL 227
H + YN ++ + A+ ++E + +++EM L TFTI + A+ AAK+ + +
Sbjct: 192 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 228 MQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKS----EQSVKGKKLRLAYESLQ 283
M+ Y + + L +L ++ E V KL+ +
Sbjct: 252 ELMKK--------YKFKIGVE------TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM 297
Query: 284 STYAAIGNKDEVYRLWNRIKNL---QNCWNS-----------SYICMLSSLLKLDDFDGA 329
TY + N W R++NL WN ++ ML LL+ A
Sbjct: 298 MTYTVLLNG------WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 330 EKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAG 389
K+ +S+ + R +MI +CK+ ++ A Y ++DSG + D + + + G
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 390 YHMDNDMEKAVQTMKK 405
+ ++ + +K+
Sbjct: 412 FGTQKKLDTVYELLKE 427
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 107/243 (44%), Gaps = 14/243 (5%)
Query: 170 TVCYNILLKLYAQKGKYEKLDRLMQEMKE----NDLCNGATFTIRLNAYVAAKDVE-GME 224
+ YN ++ + G +DR +Q +KE TF ++ Y + D+ +E
Sbjct: 554 VILYNNIISAFCGMGN---MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKL-RLAYESLQ 283
M + TV +T++ NG ++ +EKA+ L E ++ G Y +
Sbjct: 611 VFDMMRRCGCVPTV--HTFNGLINGLVEKRQMEKAVEIL--DEMTLAGVSANEHTYTKIM 666
Query: 284 STYAAIGNKDEVYRLWNRIKNLQ-NCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKN 342
YA++G+ + + + R++N + +Y +L + K A + E + +
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
Query: 343 FDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQT 402
++ + N++I + +RG + +A IQ++ G K D ++ + DM +A QT
Sbjct: 727 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 403 MKK 405
+++
Sbjct: 787 IEE 789
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 12/277 (4%)
Query: 171 VCYNILLKLYAQKGKYEKLDRLMQEMKEND-LCNGATFTIRLNAYVAAKDVEGMEKLLMQ 229
V YN L+ KGK +K L++ M + + N T+ +N V + +LL
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 230 MEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRL-AYESLQSTYAA 288
ME + ++ + YS +G K G E+A++ +K + KG K + Y L
Sbjct: 353 ME-ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE--KGCKPNIVVYSVLVDGLCR 409
Query: 289 IGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDG-AEKILAEWESEHKNFDTR- 346
G +E + NR+ C ++Y SSL+K G E+ + W+ K +R
Sbjct: 410 EGKPNEAKEILNRMIA-SGCLPNAYT--YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 347 --IPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
+++I C G + +A K+L G K D ++ + G M+ A++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 405 KAILANRPGWRPSPSTLVACITYLKEKLDLESALEIL 441
+ + P +P T + L + D+ A+++L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMK----ENDLCNGATFTIRLNAYVAAKDVEGMEKLLM 228
Y ++++ + G+ +++ ++ +MK E DL +TI L +A +D +KL
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDL---VCYTIVLQGVIADEDYPKADKLFD 310
Query: 229 QMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAA 288
++ +A D YTY+ NG K ++E AL + S + + + Y L
Sbjct: 311 ELLLLGLAP-DVYTYNVYINGLCKQNDIEGALKMM-SSMNKLGSEPNVVTYNILIKALVK 368
Query: 289 IGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRI 347
G+ LW ++ N N + ++ M+S+ +++D+ A +L E + + +
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSR 428
Query: 348 PNLMITAYCKRGLLDKAEAYIQKLL 372
+I+ C++GL+D+A + L+
Sbjct: 429 IEEVISRLCEKGLMDQAVELLAHLV 453
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 205 ATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALK 264
T I LN+ + A DV +L Q+ +D + TY+ +G+ K G + A L
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQI-SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 265 KSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNS-SYICMLSSLLKL 323
K S + Y L S+ G+ D+ +RL+ ++ N + S+ M+ LK
Sbjct: 519 KMRVSELQPSV-FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 324 DDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSW 383
D AE +L + D + +I + K G LD+A ++ K++DSG + D
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 384 DRMAAGYHMDNDMEKAVQTMKKAI 407
D + + +K + +KK +
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLV 661
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLCNGA-TFTIRLNAYVAAKDVEGMEKLLMQME 231
Y+ L++ Y Q + R ++M + A +F LNA + +K+ + + +L ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 232 ADPMATV-DWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLR---LAYESLQSTYA 287
+ D +Y Y +G EKA+ +++ ++GK + +A+ ++ S+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQ----MQGKGMEVTTIAFTTILSSLY 220
Query: 288 AIGNKDEVYRLWNR-IKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTR 346
G + LWN +K N++Y + S K + + ++++ E S DT
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTI 279
Query: 347 IPNLMITAYCKRGLLDKAEAYIQKL 371
N ++TAYC+RG+LD+A+ + L
Sbjct: 280 SYNYLMTAYCERGMLDEAKKVYEGL 304
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 10/222 (4%)
Query: 173 YNILLKLYAQKGKYEKLDRLMQEMKENDLC--NGATFTIRLNAYVAAKDVEGMEKLLMQM 230
Y +L+K +G +K L EM C N T+T+ ++ +E + +M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 231 EADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIG 290
D + TY+ NGY K G V A L E+ +R + L +G
Sbjct: 363 VKDRIFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR-TFNELMEGLCRVG 420
Query: 291 NKDEVYRLWNRIKNLQNCWNS---SYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRI 347
+ L R+ L N + SY ++ L + + A K+L+ D
Sbjct: 421 KPYKAVHLLKRM--LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 348 PNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAG 389
+I A+CK+G D A A++ +L G LD + + G
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 147/342 (42%), Gaps = 40/342 (11%)
Query: 170 TVCYNILLKLYAQKGKYEK----LDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGMEK 225
T YN L+K Y GK E+ LD +++E + N TF + + A+ K VE +
Sbjct: 150 TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 226 LLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALA-ALKKSEQSVKGKKLRLAYESLQS 284
++ +ME + D TY+T A Y++ G +A + ++K K K +
Sbjct: 210 VVKKME-ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVG 268
Query: 285 TYAAIGNKDEVYRLWNRIKNLQNCWN-SSYICMLSSLLKLDDFDGAEKI-----LAEWES 338
Y G + R R+K ++ N + +++ +++ D DG +++ L +
Sbjct: 269 GYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNE 328
Query: 339 E-----HKNFDTRIPNLM---------------ITAYCKRGLLDKAEAYIQKLLDSGKKL 378
E ++ ++ LM + A+ G ++KA ++++ +G K
Sbjct: 329 EVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 388
Query: 379 DGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGWRPSPSTLVACITYLKEKLDLESAL 438
D ++ +A GY + +KA + ++ I+ + RP+ I+ ++ A+
Sbjct: 389 DAHAYSILAKGYVRAKEPKKAEELLETLIVES----RPNVVIFTTVISGWCSNGSMDDAM 444
Query: 439 EIL-KLCKEDGHIKITTYDGLV-SYAHGEIP--DKEALDLMK 476
+ K+CK I T++ L+ Y + P +E L +M+
Sbjct: 445 RVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 486