Miyakogusa Predicted Gene

Lj3g3v2807960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2807960.1 Non Chatacterized Hit- tr|I1M3U2|I1M3U2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40565
PE,89.27,0,Ubiquitin homologues,Ubiquitin; HAT (Half-A-TPR)
repeats,RNA-processing protein, HAT helix; no descr,CUFF.44651.1
         (1037 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G03430.1 | Symbols: STA1, EMB2770 | pre-mRNA splicing factor-...  1454   0.0  
AT4G38590.2 | Symbols: BGAL14 | beta-galactosidase 14 | chr4:180...   149   1e-35
AT4G38590.1 | Symbols: BGAL14 | beta-galactosidase 14 | chr4:180...   149   1e-35
AT5G41770.1 | Symbols:  | crooked neck protein, putative / cell ...    68   4e-11
AT3G17040.1 | Symbols: HCF107 | high chlorophyll fluorescent 107...    65   4e-10
AT3G17040.2 | Symbols: HCF107 | high chlorophyll fluorescent 107...    64   5e-10
AT5G45990.1 | Symbols:  | crooked neck protein, putative / cell ...    57   5e-08
AT3G13210.1 | Symbols:  | crooked neck protein, putative / cell ...    57   7e-08

>AT4G03430.1 | Symbols: STA1, EMB2770 | pre-mRNA splicing
            factor-related | chr4:1517411-1520500 REVERSE LENGTH=1029
          Length = 1029

 Score = 1454 bits (3763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1048 (69%), Positives = 826/1048 (78%), Gaps = 36/1048 (3%)

Query: 1    MVFIVPPHGRTLALNINPKTTTLHLLKLAIEQTHGIP-----VXXXXXXXXXXXXXXGVN 55
            MVF+  P+G+TL++++NP +TT+   +    Q   +P                      +
Sbjct: 1    MVFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDS 60

Query: 56   DSLLISDLGVGPYSTLTLHVPLYGGMQPPVVPKPRFDFLNSKPPPNYVAGLGRGATGFTT 115
            DS+L+SDLGV  +ST+ +HV L GGMQ    PKPR DFLNSKPP NYVAGLGRGATGFTT
Sbjct: 61   DSILLSDLGVSRFSTVIIHVLLLGGMQA-APPKPRLDFLNSKPPSNYVAGLGRGATGFTT 119

Query: 116  RSDIGPARAAPDLPXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXNQKFDEFE 170
            RSDIGPARAAPDLP                                      NQ FDEFE
Sbjct: 120  RSDIGPARAAPDLPDRSALATAAAPGVGRGAGKPSEAEAEDDEEAEEKRYDENQTFDEFE 179

Query: 171  GNDVGLFXXXXXXXXXXXXXXVWEEIXXXXXXXXXXXXXXXXXXXIEKYRASNPKITEQF 230
            GNDVGLF              +WE I                   IEKYRASNPKITEQF
Sbjct: 180  GNDVGLFANAEYDEDDKEADAIWESIDQRMDSRRKDRREAKLKEEIEKYRASNPKITEQF 239

Query: 231  ADLKRKLYTLSSDDWQSLEKFESGGYXXXXXXXXFESFVPVPDTLLEKARKEQEHVSALD 290
            ADLKRKL+TLS+D+W S+   E G Y        FESFVP+PDTLLEKA+KE+E V ALD
Sbjct: 240  ADLKRKLHTLSADEWDSIP--EIGDYSLRNKKKKFESFVPIPDTLLEKAKKEKELVMALD 297

Query: 291  PKSRVASGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNS 350
            PKSR A G+ETPW QTPVTDLTAVGEGRGTVLSLKLD LSDSVSG T VDPKGYLT L S
Sbjct: 298  PKSRAAGGSETPWGQTPVTDLTAVGEGRGTVLSLKLDNLSDSVSGQTVVDPKGYLTDLKS 357

Query: 351  MKITSDAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEEC 410
            MK T+D EI D  +ARLL KS+TQ+NPK+P GWIAAAR+EE+ GK++ AR  I++GCEEC
Sbjct: 358  MKRTTDEEIYDRNRARLLYKSLTQSNPKNPNGWIAAARVEEVDGKIKAARFQIQRGCEEC 417

Query: 411  PKNEDVWLEACRLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLEHDDANRSRVLRKGLEH 470
            PKNEDVWLEACRLANPE+AK VIA+GVK IP+SVKLWL+AAKLEHD  N+SRVLRKGLEH
Sbjct: 418  PKNEDVWLEACRLANPEDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENKSRVLRKGLEH 477

Query: 471  IPDSVRLWKAVVELANEHDASLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARER 530
            IPDSVRLWKAVVELANE DA +LLHRAVECCPLH+ELW+ALARLETY  +KKVLN+ARE+
Sbjct: 478  IPDSVRLWKAVVELANEEDARILLHRAVECCPLHLELWVALARLETYAESKKVLNKAREK 537

Query: 531  LPKEPAIWITAAKLEEANG-------NTSMVGKIIERGIRALQREGVVIDREAWMKEAEA 583
            LPKEPAIWITAAKLEEANG       NT+MVGKII+RGI+ LQREGVVIDRE WM EAEA
Sbjct: 538  LPKEPAIWITAAKLEEANGKLDEANDNTAMVGKIIDRGIKTLQREGVVIDRENWMSEAEA 597

Query: 584  AERAGSVATCQSIIQNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTLSVF 643
             ER GSVATCQ+II+NTIGIGVEEEDRKRTWVADA+ECKKRGSIETARAIYAHA  LSVF
Sbjct: 598  CERVGSVATCQAIIKNTIGIGVEEEDRKRTWVADADECKKRGSIETARAIYAHA--LSVF 655

Query: 644  MQKKSIWLKAAQLEKSHGTRESLDALLRTAVKYIPQAEVLWLMGAKEKWLAGDVPAARAI 703
            + KKSIWLKAAQLEKSHG+RESLDALLR AV Y+PQAEVLWLMGAKEKWLAGDVPAARAI
Sbjct: 656  LTKKSIWLKAAQLEKSHGSRESLDALLRKAVTYVPQAEVLWLMGAKEKWLAGDVPAARAI 715

Query: 704  LQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGN 763
            LQEAYAAIPNSEEIWLAAFKLEFEN EPERARMLLAKARERGGTERVWMKSAIVERELGN
Sbjct: 716  LQEAYAAIPNSEEIWLAAFKLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGN 775

Query: 764  IEEERRLLDEGLKQFPSFFKLWLMLGQLEERLGENAKRLDQPEKRLDHLKEAKKVYESGL 823
            +EEERRLL+EGLKQFP+FFKLWLMLGQLEE              R  HL++A+K Y++GL
Sbjct: 776  VEEERRLLNEGLKQFPTFFKLWLMLGQLEE--------------RFKHLEQARKAYDTGL 821

Query: 824  KNCPNCVPLWLSLATLEEETNGLSKARAVLTMARKRNPQNPELWLAAVRAELKHASKKEA 883
            K+CP+C+PLWLSLA LEE+ NGL+KARA+LT ARK+NP   ELWLAA+RAEL+H +K+EA
Sbjct: 822  KHCPHCIPLWLSLADLEEKVNGLNKARAILTTARKKNPGGAELWLAAIRAELRHDNKREA 881

Query: 884  DNLISKALQECPNSGILWAAAIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWHDRK 943
            ++L+SKALQ+CP SGILWAA IEM PRP+RKTKS+DA+KKCD DPHV  AVAKLFW D+K
Sbjct: 882  EHLMSKALQDCPKSGILWAADIEMAPRPRRKTKSIDAMKKCDRDPHVTIAVAKLFWQDKK 941

Query: 944  VDKARTWLNRAVTLAPDIGDFWALYYKFELQHGAEENQKDVLKRCVAAEPKHGEKWQVIS 1003
            V+KAR W  RAVT+ PDIGDFWAL+YKFELQHG++E++K+V+ +CVA EPKHGEKWQ IS
Sbjct: 942  VEKARAWFERAVTVGPDIGDFWALFYKFELQHGSDEDRKEVVAKCVACEPKHGEKWQAIS 1001

Query: 1004 KAVENAHQPSESILKKVVVALGKEENAA 1031
            KAVENAHQP E ILK+VV AL KEEN+A
Sbjct: 1002 KAVENAHQPIEVILKRVVNALSKEENSA 1029


>AT4G38590.2 | Symbols: BGAL14 | beta-galactosidase 14 |
            chr4:18036116-18040928 FORWARD LENGTH=1052
          Length = 1052

 Score =  149 bits (376), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 103/202 (50%), Gaps = 38/202 (18%)

Query: 55   NDSLLISDLGVGPYSTLTLHVPLYGGMQPPVVPKPRFDFLNSKPPPNYVAGLGRGATGFT 114
            +DS L+SDLG GP+ST+ ++VPL GG  PP   +PRF+ +   PP NYVAGLGRGA GFT
Sbjct: 884  SDSALVSDLGFGPFSTVVVNVPLIGGAAPP---QPRFNLM---PPSNYVAGLGRGAAGFT 937

Query: 115  TRSDIGPARAAPDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDV 174
            TRSDIGPARA  D                                   N KFD+FEG+D 
Sbjct: 938  TRSDIGPARANGD------------------------------GNADVNHKFDDFEGHDA 967

Query: 175  GLFXXXXXXXXXXXXXXVWEEIXXXXXXXXXXXXXXXXXXXIEKYRASNPKITEQFADLK 234
            GLF              +W+ I                   IE YRASNPK++ QF DL 
Sbjct: 968  GLFANAESDDQDKEADAIWDAIDRRMDSRRKDRREAKLKQEIENYRASNPKVSGQFVDLT 1027

Query: 235  RKLYTLSSDDWQSLEKFESGGY 256
            RKL+TLS D+W S+   E G Y
Sbjct: 1028 RKLHTLSEDEWDSIP--EIGNY 1047


>AT4G38590.1 | Symbols: BGAL14 | beta-galactosidase 14 |
           chr4:18036395-18040928 FORWARD LENGTH=988
          Length = 988

 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 103/202 (50%), Gaps = 38/202 (18%)

Query: 55  NDSLLISDLGVGPYSTLTLHVPLYGGMQPPVVPKPRFDFLNSKPPPNYVAGLGRGATGFT 114
           +DS L+SDLG GP+ST+ ++VPL GG  PP   +PRF+ +   PP NYVAGLGRGA GFT
Sbjct: 820 SDSALVSDLGFGPFSTVVVNVPLIGGAAPP---QPRFNLM---PPSNYVAGLGRGAAGFT 873

Query: 115 TRSDIGPARAAPDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDV 174
           TRSDIGPARA  D                                   N KFD+FEG+D 
Sbjct: 874 TRSDIGPARANGD------------------------------GNADVNHKFDDFEGHDA 903

Query: 175 GLFXXXXXXXXXXXXXXVWEEIXXXXXXXXXXXXXXXXXXXIEKYRASNPKITEQFADLK 234
           GLF              +W+ I                   IE YRASNPK++ QF DL 
Sbjct: 904 GLFANAESDDQDKEADAIWDAIDRRMDSRRKDRREAKLKQEIENYRASNPKVSGQFVDLT 963

Query: 235 RKLYTLSSDDWQSLEKFESGGY 256
           RKL+TLS D+W S+   E G Y
Sbjct: 964 RKLHTLSEDEWDSIP--EIGNY 983


>AT5G41770.1 | Symbols:  | crooked neck protein, putative / cell
           cycle protein, putative | chr5:16718021-16720936 FORWARD
           LENGTH=705
          Length = 705

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 100/474 (21%), Positives = 182/474 (38%), Gaps = 104/474 (21%)

Query: 490 ASLLLHRAVECCPLHVELWLALARLET----YDNAKKVLNRARERLPKEPAIWITAAKLE 545
           A  +  RA+E    +  LWL  A  E      ++A+ V +RA   LP+   +W     +E
Sbjct: 111 ARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHME 170

Query: 546 EANGNTSMVGKIIERGI-------------------RALQREGVVIDR--------EAWM 578
           E  GN +   +I ER +                     ++R   + +R         A++
Sbjct: 171 EILGNIAGARQIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERFVLCHPKVSAYI 230

Query: 579 KEAEAAERAGSVATCQSIIQNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHAL 638
           + A+   + G VA C+S+ +       ++E+ +  +VA AE  ++   +E AR IY  AL
Sbjct: 231 RYAKFEMKGGEVARCRSVYERATEKLADDEEAEILFVAFAEFEERCKEVERARFIYKFAL 290

Query: 639 TL-----------------SVFMQKKSI-------------------------WLKAAQL 656
                                +  K+ I                         W    +L
Sbjct: 291 DHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKSPSNYDSWFDYVRL 350

Query: 657 EKSHGTRESLDALLRTAVKYIPQAE---------VLWLMGA-KEKWLAGDVPAARAILQE 706
           E+S G ++ +  +   A+  +P AE          LW+  A  E+    D+   R + +E
Sbjct: 351 EESVGNKDRIREIYERAIANVPPAEEKRYWQRYIYLWINYALFEEIETEDIERTRDVYRE 410

Query: 707 AYAAIPNSE----EIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELG 762
               IP+S+    +IWL A + E        AR +L  A  +   ++++ K   +E +LG
Sbjct: 411 CLKLIPHSKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLG 470

Query: 763 NIEEERRLLDEGLKQFPSFFKLWLMLGQLEERLGENAKRLDQPEKRLDHLKEAKKVYESG 822
           N++  R+L +  L+  P     W    +LE  L E  +              A+ ++E  
Sbjct: 471 NMDRCRKLYERYLEWSPENCYAWSKYAELERSLVETER--------------ARAIFELA 516

Query: 823 LKNCPNCVP--LWLSLATLEEETNGLSKARAVLTMARKRNPQNPELWLAAVRAE 874
           +      +P  LW +    E     L + RA+      R  ++ ++W++  + E
Sbjct: 517 ISQPALDMPELLWKAYIDFEISEGELERTRALYERLLDRT-KHYKVWVSFAKFE 569


>AT3G17040.1 | Symbols: HCF107 | high chlorophyll fluorescent 107 |
           chr3:5809378-5812605 REVERSE LENGTH=652
          Length = 652

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 146/360 (40%), Gaps = 27/360 (7%)

Query: 362 FKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNEDVWLEAC 421
           +K A  +L+      P+    ++A  ++     KL  AR L EKGC+   + E+ ++  C
Sbjct: 184 YKDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQST-QGENSYIWQC 242

Query: 422 ------RLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLEHDDANRSR---VLRKGLEHIP 472
                 RL N   A+ +      +    V  W   A LE    N S+   +L KGL+   
Sbjct: 243 WAVLENRLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCG 302

Query: 473 DSVRLWKAVVEL----ANEHDASLLLHRAVECCPLHVELWLALARLET----YDNAKKVL 524
            +  +++ +  L         A  L  +A  C       WLA A+LE     Y  A+K+ 
Sbjct: 303 RNEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLF 362

Query: 525 NRARERLPKEPAIWITAAKLEEANGNTSMVGKIIERGIRALQREGVVIDREAWMKEAEAA 584
            +A +  PK    W      E   GN     K+++ G     R+ V++     ++   + 
Sbjct: 363 EKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHS- 421

Query: 585 ERAGSVATCQSIIQNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTLSVFM 644
               S    +++++    +   +   +  W+A      K G+  TAR +Y  AL++    
Sbjct: 422 ----SANLARALLRRASEL---DPRHQPVWIAWGWMEWKEGNTTTARELYQRALSIDANT 474

Query: 645 QKKSIWLKA-AQLEKSHGTRESLDALLRTAVKYIPQAEVLWLMGAKEKWLAGDVPAARAI 703
           +  S  L+A   LE+  G   +   L R+++    Q+ V W+  A+ +   GD   A  I
Sbjct: 475 ESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEI 534



 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 39/307 (12%)

Query: 359 ISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNEDVW- 417
           + + ++AR L  + T  + KH   W   A LE   G +  AR L+ KG + C +NE ++ 
Sbjct: 250 LGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQ 309

Query: 418 ----LEACRLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLEHDDANR---SRVLRKGLEH 470
               LEA +    E+A+ +  Q       S   WL  A+LE          ++  K ++ 
Sbjct: 310 TLALLEA-KAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQA 368

Query: 471 IPDSVRLWK--AVVE--LANEHDASLLLHRAVECCPLHVELWLALARLE----TYDNAKK 522
            P +   W    V E  + N      LL       P    L  +L  LE    + + A+ 
Sbjct: 369 SPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARA 428

Query: 523 VLNRARERLPKEPAIWITAAKLEEANGNTSMVGKIIERGI----------RALQREGVVI 572
           +L RA E  P+   +WI    +E   GNT+   ++ +R +          R LQ  GV+ 
Sbjct: 429 LLRRASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSIDANTESASRCLQAWGVL- 487

Query: 573 DREAWMKEAEAAERAGSVATCQSIIQNTIGIGVEEEDRKRTWVADAEECKKRGSIETARA 632
                       +RAG+++  + + ++++ I  +      TW    E+       E  R 
Sbjct: 488 -----------EQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEIRN 536

Query: 633 IYAHALT 639
           +Y    T
Sbjct: 537 LYFQQRT 543



 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 22/237 (9%)

Query: 356 DAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNED 415
           +A+   +++AR L K  T  N +    W+A A+LE    +   AR+L EK  +  PKN  
Sbjct: 315 EAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRF 374

Query: 416 VW-----LEACRLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLE--HDDANRSR-VLRKG 467
            W      EA  + N E  + ++  G    P    L      LE  H  AN +R +LR+ 
Sbjct: 375 AWHVWGVFEAG-VGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRA 433

Query: 468 LEHIPDSVRLWKAVVEL----ANEHDASLLLHRAV------ECCPLHVELWLALARLETY 517
            E  P    +W A   +     N   A  L  RA+      E     ++ W  L +    
Sbjct: 434 SELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGN 493

Query: 518 DNAKKVLNRARERLPKEPAI-WITAAKLEEANGNTSMVGKIIERGIRALQREGVVID 573
            +A + L R+   +  +  + W+T A+LEE  G+T    +I  R +   QR  VV D
Sbjct: 494 LSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEI--RNLYFQQRTEVVDD 548



 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 152/401 (37%), Gaps = 31/401 (7%)

Query: 502 PLHVELWLAL------ARLETYDNAKKVLNRARERLPKEPAIWITAAKLEEANGNTSMVG 555
           PL V L L+L      AR   Y +A+K+L +     P++   ++   K+       +   
Sbjct: 163 PLAVNLDLSLYKAKVLARNFRYKDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEAR 222

Query: 556 KIIERGIRALQREGVVIDREAWMKEAEAAERAGSVATCQSIIQNTIGIGVEEEDRKRTWV 615
            + E+G ++ Q E   I    W   A    R G+V   + +        V ++     W 
Sbjct: 223 ILYEKGCQSTQGENSYI----WQCWAVLENRLGNVRRARELFDAAT---VADKKHVAAWH 275

Query: 616 ADAEECKKRGSIETARAIYAHALTLSVFMQKKSIWLKAAQLEKSHGTRESLDALLRTAVK 675
             A    K+G+I  AR + A  L      + + I+   A LE   G  E    L + A  
Sbjct: 276 GWANLEIKQGNISKARNLLAKGLKFC--GRNEYIYQTLALLEAKAGRYEQARYLFKQATI 333

Query: 676 YIPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERAR 735
              ++   WL  A+ +      PAAR + ++A  A P +   W      E      ER R
Sbjct: 334 CNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGR 393

Query: 736 MLLAKARERGGTERVWMKS-AIVERELGNIEEERRLLDEGLKQFPSFFKLWLMLGQLEER 794
            LL         + V ++S  ++E +  +    R LL    +  P    +W+  G +E +
Sbjct: 394 KLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWK 453

Query: 795 LGEN--AKRLDQPEKRLDHLKEAKKVYESGLKNCPNCVPLWLSLATLEEETNGLSKARAV 852
            G    A+ L Q    +D          +  ++   C+  W     LE+    LS AR +
Sbjct: 454 EGNTTTARELYQRALSID----------ANTESASRCLQAW---GVLEQRAGNLSAARRL 500

Query: 853 LTMARKRNPQNPELWLAAVRAELKHASKKEADNLISKALQE 893
              +   N Q+   W+   + E      + A+ + +   Q+
Sbjct: 501 FRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEIRNLYFQQ 541



 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 15/210 (7%)

Query: 695 GDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGG-TERVWMK 753
           G+V  AR +   A  A       W     LE +     +AR LLAK  +  G  E ++  
Sbjct: 251 GNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQT 310

Query: 754 SAIVERELGNIEEERRLLDEGLKQFPSFFKLWLMLGQLEERLGENAKRLDQPEKRLDHLK 813
            A++E + G  E+ R L  +           WL   QLE         + Q     +   
Sbjct: 311 LALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLE---------IQQ-----ERYP 356

Query: 814 EAKKVYESGLKNCPNCVPLWLSLATLEEETNGLSKARAVLTMARKRNPQNPELWLAAVRA 873
            A+K++E  ++  P     W      E     + + R +L +    NP++P L  +    
Sbjct: 357 AARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLL 416

Query: 874 ELKHASKKEADNLISKALQECPNSGILWAA 903
           E KH+S   A  L+ +A +  P    +W A
Sbjct: 417 EYKHSSANLARALLRRASELDPRHQPVWIA 446


>AT3G17040.2 | Symbols: HCF107 | high chlorophyll fluorescent 107 |
           chr3:5809378-5812605 REVERSE LENGTH=618
          Length = 618

 Score = 64.3 bits (155), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 27/360 (7%)

Query: 362 FKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNEDVWLEAC 421
           +K A  +L+      P+    ++A  ++     KL  AR L EKGC+   + E+ ++  C
Sbjct: 150 YKDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQST-QGENSYIWQC 208

Query: 422 ------RLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLEHDDANRSR---VLRKGLEHIP 472
                 RL N   A+ +      +    V  W   A LE    N S+   +L KGL+   
Sbjct: 209 WAVLENRLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCG 268

Query: 473 DSVRLWKAVVEL----ANEHDASLLLHRAVECCPLHVELWLALARLET----YDNAKKVL 524
            +  +++ +  L         A  L  +A  C       WLA A+LE     Y  A+K+ 
Sbjct: 269 RNEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLF 328

Query: 525 NRARERLPKEPAIWITAAKLEEANGNTSMVGKIIERGIRALQREGVVIDREAWMKEAEAA 584
            +A +  PK    W      E   GN     K+++ G     R+ V++     ++   + 
Sbjct: 329 EKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHS- 387

Query: 585 ERAGSVATCQSIIQNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTLSVFM 644
               S    +++++    +    +     W+A      K G+  TAR +Y  AL++    
Sbjct: 388 ----SANLARALLRRASELDPRHQP---VWIAWGWMEWKEGNTTTARELYQRALSIDANT 440

Query: 645 QKKSIWLKA-AQLEKSHGTRESLDALLRTAVKYIPQAEVLWLMGAKEKWLAGDVPAARAI 703
           +  S  L+A   LE+  G   +   L R+++    Q+ V W+  A+ +   GD   A  I
Sbjct: 441 ESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEI 500



 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 39/307 (12%)

Query: 359 ISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNEDVW- 417
           + + ++AR L  + T  + KH   W   A LE   G +  AR L+ KG + C +NE ++ 
Sbjct: 216 LGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQ 275

Query: 418 ----LEACRLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLEHDDANR---SRVLRKGLEH 470
               LEA +    E+A+ +  Q       S   WL  A+LE          ++  K ++ 
Sbjct: 276 TLALLEA-KAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQA 334

Query: 471 IPDSVRLWK--AVVE--LANEHDASLLLHRAVECCPLHVELWLALARLE----TYDNAKK 522
            P +   W    V E  + N      LL       P    L  +L  LE    + + A+ 
Sbjct: 335 SPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARA 394

Query: 523 VLNRARERLPKEPAIWITAAKLEEANGNTSMVGKIIERGI----------RALQREGVVI 572
           +L RA E  P+   +WI    +E   GNT+   ++ +R +          R LQ  GV+ 
Sbjct: 395 LLRRASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSIDANTESASRCLQAWGVL- 453

Query: 573 DREAWMKEAEAAERAGSVATCQSIIQNTIGIGVEEEDRKRTWVADAEECKKRGSIETARA 632
                       +RAG+++  + + ++++ I  +      TW    E+       E  R 
Sbjct: 454 -----------EQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEIRN 502

Query: 633 IYAHALT 639
           +Y    T
Sbjct: 503 LYFQQRT 509



 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 22/237 (9%)

Query: 356 DAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEECPKNED 415
           +A+   +++AR L K  T  N +    W+A A+LE    +   AR+L EK  +  PKN  
Sbjct: 281 EAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRF 340

Query: 416 VW-----LEACRLANPEEAKAVIAQGVKSIPSSVKLWLQAAKLE--HDDANRSR-VLRKG 467
            W      EA  + N E  + ++  G    P    L      LE  H  AN +R +LR+ 
Sbjct: 341 AWHVWGVFEAG-VGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRA 399

Query: 468 LEHIPDSVRLWKAVVEL----ANEHDASLLLHRAV------ECCPLHVELWLALARLETY 517
            E  P    +W A   +     N   A  L  RA+      E     ++ W  L +    
Sbjct: 400 SELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGN 459

Query: 518 DNAKKVLNRARERLPKEPAI-WITAAKLEEANGNTSMVGKIIERGIRALQREGVVID 573
            +A + L R+   +  +  + W+T A+LEE  G+T    +I  R +   QR  VV D
Sbjct: 460 LSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEI--RNLYFQQRTEVVDD 514



 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 152/401 (37%), Gaps = 31/401 (7%)

Query: 502 PLHVELWLAL------ARLETYDNAKKVLNRARERLPKEPAIWITAAKLEEANGNTSMVG 555
           PL V L L+L      AR   Y +A+K+L +     P++   ++   K+       +   
Sbjct: 129 PLAVNLDLSLYKAKVLARNFRYKDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEAR 188

Query: 556 KIIERGIRALQREGVVIDREAWMKEAEAAERAGSVATCQSIIQNTIGIGVEEEDRKRTWV 615
            + E+G ++ Q E   I    W   A    R G+V   + +        V ++     W 
Sbjct: 189 ILYEKGCQSTQGENSYI----WQCWAVLENRLGNVRRARELFD---AATVADKKHVAAWH 241

Query: 616 ADAEECKKRGSIETARAIYAHALTLSVFMQKKSIWLKAAQLEKSHGTRESLDALLRTAVK 675
             A    K+G+I  AR + A  L      + + I+   A LE   G  E    L + A  
Sbjct: 242 GWANLEIKQGNISKARNLLAKGLKFC--GRNEYIYQTLALLEAKAGRYEQARYLFKQATI 299

Query: 676 YIPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERAR 735
              ++   WL  A+ +      PAAR + ++A  A P +   W      E      ER R
Sbjct: 300 CNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGR 359

Query: 736 MLLAKARERGGTERVWMKS-AIVERELGNIEEERRLLDEGLKQFPSFFKLWLMLGQLEER 794
            LL         + V ++S  ++E +  +    R LL    +  P    +W+  G +E +
Sbjct: 360 KLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWK 419

Query: 795 LGEN--AKRLDQPEKRLDHLKEAKKVYESGLKNCPNCVPLWLSLATLEEETNGLSKARAV 852
            G    A+ L Q    +D          +  ++   C+  W     LE+    LS AR +
Sbjct: 420 EGNTTTARELYQRALSID----------ANTESASRCLQAW---GVLEQRAGNLSAARRL 466

Query: 853 LTMARKRNPQNPELWLAAVRAELKHASKKEADNLISKALQE 893
              +   N Q+   W+   + E      + A+ + +   Q+
Sbjct: 467 FRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEIRNLYFQQ 507


>AT5G45990.1 | Symbols:  | crooked neck protein, putative / cell
           cycle protein, putative | chr5:18651324-18653892 FORWARD
           LENGTH=673
          Length = 673

 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 126/568 (22%), Positives = 216/568 (38%), Gaps = 102/568 (17%)

Query: 352 KITSDAEISDFK-KARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIEKGCEEC 410
           KIT   E+SD++ + R   +   +    +   W+  A+ EE       AR + E+  E  
Sbjct: 49  KITDSTELSDYRLRRRKEFEDQIRRARWNIQVWVKYAKWEESQMDYARARSVWERALEGE 108

Query: 411 PKNEDVWLEACRLANPEE----AKAVIAQGVKSIPSSVKLWLQAAKLEHDDANRSRVLRK 466
            +N  +W++        +    A+ V  + V  +P   +LW +   +E            
Sbjct: 109 YRNHTLWVKYAEFEMKNKFVNNARNVWDRSVTLLPRVDQLWEKYIYMEE----------- 157

Query: 467 GLEHIPDSVRLWKAVVELANEHDASLLLHRAVECCPLHVELWLALARLETYDNAKKVLNR 526
                           +L N   A  +  R +   P   + WL   + E   N    + R
Sbjct: 158 ----------------KLGNVTGARQIFERWMNWSPDQ-KAWLCFIKFELRYNE---IER 197

Query: 527 AR---ERL----PKEPAIWITAAKLE-EANGNTSMVGKIIERGIRALQREGVVIDREA-- 576
           AR   ER     PK  A  I  AK E +  G   +  ++ ER +  L       D EA  
Sbjct: 198 ARSIYERFVLCHPKVSAF-IRYAKFEMKRGGQVKLAREVYERAVDKLAN-----DEEAEI 251

Query: 577 -WMKEAEAAERAGSVATCQSIIQ---NTIGIGVEEEDRKRTWVADAEECKKRGSIETA-- 630
            ++  AE  ER   V   + I +   + I  G  EE  K+ +VA  ++   +  IE A  
Sbjct: 252 LFVSFAEFEERCKEVERARFIYKFALDHIRKGRAEELYKK-FVAFEKQYGDKEGIEDAIV 310

Query: 631 -RAIYAHALTLSVFMQKKSIWLKAAQLEKSHGTRESLDALLRTAVKYIPQAE-------- 681
            +  + +   +S        W    +LE+S G ++ +  +   A+  +P A+        
Sbjct: 311 GKKRFEYEDEVSKNPLNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAQEKRFWQRY 370

Query: 682 -VLWLMGA-KEKWLAGDVPAARAILQEAYAAIPNSE----EIWLAAFKLEFENHEPERAR 735
             LW+  A  E+    DV   R + +E    IP+++    +IWL A + E        AR
Sbjct: 371 IYLWINYALYEEIETKDVERTRDVYRECLKLIPHTKFSFAKIWLLAAEYEIRQLNLTGAR 430

Query: 736 MLLAKARERGGTERVWMKSAIVERELGNIEEERRLLDEGLKQFPSFFKLWLMLGQLEERL 795
            +L  A  +    +++ K   +E +L NI+  R+L +  L+  P     W    + E  L
Sbjct: 431 QILGNAIGKAPKVKIFKKYIEMELKLVNIDRCRKLYERFLEWSPENCYAWRNYAEFEISL 490

Query: 796 GENAK------------RLDQPE----KRLDH------LKEAKKVYESGLKNCPNCVPLW 833
            E  +             LD PE      +D        ++ + +YE  L    +C  +W
Sbjct: 491 AETERARAIFELAISQPALDMPELLWKTYIDFEISEGEFEKTRALYERLLDRTKHC-KVW 549

Query: 834 LSLATL-----EEETNGLSKARAVLTMA 856
           +S A       E + +G+  AR +   A
Sbjct: 550 ISFAKFEASASEHKEDGIKSARVIFDRA 577


>AT3G13210.1 | Symbols:  | crooked neck protein, putative / cell
           cycle protein, putative | chr3:4244921-4247697 FORWARD
           LENGTH=657
          Length = 657

 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 108/498 (21%), Positives = 187/498 (37%), Gaps = 91/498 (18%)

Query: 443 SVKLWLQAAKLE--HDDANRSR-VLRKGLEHIPDSVRLWKAVV----ELANEHDASLLLH 495
           + ++W++ A  E  +   N +R V  + +  +P   +LW   +    +L N   A  +L 
Sbjct: 90  NTQVWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILE 149

Query: 496 RAVECCPLHVELWLALARLETYDNAKKVLNRARERL----PKEPAIWITAAKLEEANGNT 551
           R + C P   + WL   + E   N  +      ER     PK  A +I  AK E  +G  
Sbjct: 150 RWIHCSPDQ-QAWLCFIKFELKYNEIECARSIYERFVLCHPKVSA-YIRYAKFEMKHGQV 207

Query: 552 SMVGKIIERGIRALQREGVVIDREAWMKEAEAAERAGSVATCQSII-----QNTIG--IG 604
            +  K+ ER  + L       D EA +     AE           I     +N     + 
Sbjct: 208 ELAMKVFERAKKEL-----ADDEEAEILFVAFAEFEEQYKFALDQIPKGRAENLYSKFVA 262

Query: 605 VEEEDRKRTWVADAEECKKRGSIETARAIYAHALTLSVFMQKKSIWLKAAQLEKSHGTRE 664
            E+++  +  + DA   K+R   E    +  + L           W    +LE++ G ++
Sbjct: 263 FEKQNGDKEGIEDAIIGKRRCQYEDE--VRKNPLNYDS-------WFDFVRLEETVGNKD 313

Query: 665 SLDALLRTAVKYIPQAE-----------VLWLMGAK-EKWLAGDVPAARAILQEAYAAIP 712
            +  +   AV  +P  E            LW+  A   + +  DV + R + +     IP
Sbjct: 314 RIREIYERAVANVPPPEAQEKRYWQRYIYLWINYAFFAEMVTEDVESTRDVYRACLKLIP 373

Query: 713 NSE----EIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEER 768
           +S+    +IWL A + E        AR +L  A  +   ++++ K   +E +L NI+  R
Sbjct: 374 HSKFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCR 433

Query: 769 RLLDEGLKQFPSFFKLWLMLGQLEERLGENAKR------------LDQPE----KRLDH- 811
           +L +  L+  P     W    + E  L E  +             LD PE      +D  
Sbjct: 434 KLYERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYIDFE 493

Query: 812 -----LKEAKKVYESGLKNCPNCVPLWLSLATLE-----------------EETNGLSKA 849
                L+  + +YE  L    +C  +W+  A  E                  + +G+ +A
Sbjct: 494 ISEGELERTRALYERLLDRTKHC-KVWVDFAKFEASAAEHKEDEEEEDAIERKKDGIKRA 552

Query: 850 RAVLTMARKRNPQN-PEL 866
           R +   A   N  + PEL
Sbjct: 553 REIFDRANTYNKDSTPEL 570