Miyakogusa Predicted Gene
- Lj3g3v2781610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2781610.1 tr|Q0IHG9|Q0IHG9_XENLA MGC154358 protein
OS=Xenopus laevis GN=MGC154358 PE=2 SV=1,30.1,7e-19,SUBFAMILY NOT
NAMED,NULL; PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17),Mpv17/PMP22;
seg,NULL; Mpv17,CUFF.44627.1
(276 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G03410.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 402 e-112
AT4G03410.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 400 e-112
AT1G52870.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 394 e-110
AT1G52870.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 305 2e-83
AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 76 3e-14
AT5G43140.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 69 3e-12
AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 69 3e-12
AT4G14305.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 57 2e-08
AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 52 6e-07
AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 50 1e-06
AT4G14305.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 49 3e-06
>AT4G03410.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:1501907-1503503 FORWARD LENGTH=361
Length = 361
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/232 (79%), Positives = 205/232 (88%)
Query: 26 STEVARDSDIVTSRAVNAIIVLGFGTFAVTKLLTIDHDYWHGWTFYEILRYAPEHNWIAY 85
S + D+D + SR +NA IVL GT AVTKLLTIDHDYW GWT YEILRYAPEHNW AY
Sbjct: 72 SEDKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAY 131
Query: 86 EEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSHY 145
E+ LK NPVLAKMAISG+VYS+GDWIAQCYEGKP+FEFDRTR+ RSGLVGFTLHGSLSHY
Sbjct: 132 EQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHY 191
Query: 146 YYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTFW 205
YYQ CEALFPF++WWVVPAKVAFDQTVW+AIWNSIYF LGLLRF+S +I+ E+K+TF
Sbjct: 192 YYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFL 251
Query: 206 PMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILSTYSNEKSETR 257
PMLTAGWKLWP AHLVTYGVIPV+QRLLWVD +ELIWVTILSTYSNEK+E +
Sbjct: 252 PMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 303
>AT4G03410.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:1501907-1503486 FORWARD LENGTH=317
Length = 317
Score = 400 bits (1027), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/232 (79%), Positives = 205/232 (88%)
Query: 26 STEVARDSDIVTSRAVNAIIVLGFGTFAVTKLLTIDHDYWHGWTFYEILRYAPEHNWIAY 85
S + D+D + SR +NA IVL GT AVTKLLTIDHDYW GWT YEILRYAPEHNW AY
Sbjct: 72 SEDKVEDTDRLMSRGINAAIVLAAGTVAVTKLLTIDHDYWQGWTLYEILRYAPEHNWFAY 131
Query: 86 EEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSHY 145
E+ LK NPVLAKMAISG+VYS+GDWIAQCYEGKP+FEFDRTR+ RSGLVGFTLHGSLSHY
Sbjct: 132 EQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSHY 191
Query: 146 YYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTFW 205
YYQ CEALFPF++WWVVPAKVAFDQTVW+AIWNSIYF LGLLRF+S +I+ E+K+TF
Sbjct: 192 YYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFL 251
Query: 206 PMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILSTYSNEKSETR 257
PMLTAGWKLWP AHLVTYGVIPV+QRLLWVD +ELIWVTILSTYSNEK+E +
Sbjct: 252 PMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQ 303
>AT1G52870.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr1:19685856-19687678 FORWARD
LENGTH=366
Length = 366
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 179/220 (81%), Positives = 197/220 (89%)
Query: 39 RAVNAIIVLGFGTFAVTKLLTIDHDYWHGWTFYEILRYAPEHNWIAYEEALKRNPVLAKM 98
R +NA IVL G++A+TKLLTIDHDYWHGWT +EILRYAP+HNWIAYEEALK+NPVLAKM
Sbjct: 127 RTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVLAKM 186
Query: 99 AISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSHYYYQVCEALFPFKQ 158
ISGVVYS+GDWIAQCYEGKP+FE DR R RSGLVGFTLHGSLSH+YYQ CE LFPF+
Sbjct: 187 VISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSHFYYQFCEELFPFQD 246
Query: 159 WWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTFWPMLTAGWKLWPFA 218
WWVVP KVAFDQTVW+AIWNSIYF LG LRFES +I+ ELK+TF PMLTAGWKLWPFA
Sbjct: 247 WWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTAGWKLWPFA 306
Query: 219 HLVTYGVIPVEQRLLWVDSVELIWVTILSTYSNEKSETRI 258
HL+TYG++PVEQRLLWVD VELIWVTILSTYSNEKSE RI
Sbjct: 307 HLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARI 346
>AT1G52870.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr1:19685856-19687310 FORWARD
LENGTH=306
Length = 306
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 155/183 (84%), Gaps = 4/183 (2%)
Query: 39 RAVNAIIVLGFGTFAVTKLLTIDHDYWHGWTFYEILRYAPEHNWIAYEEALKRNPVLAKM 98
R +NA IVL G++A+TKLLTIDHDYWHGWT +EILRYAP+HNWIAYEEALK+NPVLAKM
Sbjct: 127 RTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVLAKM 186
Query: 99 AISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSHYYYQVCEALFPFKQ 158
ISGVVYS+GDWIAQCYEGKP+FE DR R RSGLVGFTLHGSLSH+YYQ CE LFPF+
Sbjct: 187 VISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSHFYYQFCEELFPFQD 246
Query: 159 WWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTFWPMLTAGWKLWPFA 218
WWVVP KVAFDQTVW+AIWNSIYF LG LRFES +I+ ELK+TF PMLT G F
Sbjct: 247 WWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTVG----SFG 302
Query: 219 HLV 221
HL+
Sbjct: 303 HLL 305
>AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:16254065-16255592 REVERSE
LENGTH=261
Length = 261
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 85 YEEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSH 144
Y +K PVL K S ++Y D +Q + +D R R G G + G H
Sbjct: 86 YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145
Query: 145 YYYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTF 204
Y++ + +LFP + K+A QTV+ N ++F L+ E+ + I LK
Sbjct: 146 YWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDL 205
Query: 205 WPMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILSTYSNEKSETRI 258
P + G WP +T+ PV + L +S +W ++ ++ + T I
Sbjct: 206 LPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMASRATPTAI 259
>AT5G43140.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr5:17321570-17323224 FORWARD
LENGTH=254
Length = 254
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%)
Query: 85 YEEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSH 144
Y L+ +P + K + V+Y D +Q +P FD R R G G H
Sbjct: 82 YLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQH 141
Query: 145 YYYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTF 204
++ + P + K+ Q ++ + N++++ L+ E+ I LK
Sbjct: 142 LWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVARLKRDL 201
Query: 205 WPMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILSTYSNE 252
P L G WP VT+ +PV + L S IW L+ +N+
Sbjct: 202 LPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMANQ 249
>AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr2:6387820-6389563 REVERSE LENGTH=252
Length = 252
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%)
Query: 85 YEEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSH 144
Y +K +PV+ K S ++Y D +Q +D R R G G + G H
Sbjct: 77 YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136
Query: 145 YYYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTF 204
Y++ LFP + K+A QT++ I I+F L+ E + I LK
Sbjct: 137 YWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDL 196
Query: 205 WPMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILSTYSNEKSETRI 258
P L G WP +T+ PV + L +S +W ++ +N + I
Sbjct: 197 LPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREKPVAI 250
>AT4G14305.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:8235335-8236605 REVERSE LENGTH=185
Length = 185
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 82 WIAYEEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGS 141
W Y L+ +P+ K +GV+ D IAQ G +F R L L GF G
Sbjct: 9 WRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLM--LYGFAYGGP 66
Query: 142 LSHYYYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESL--TNIYGE 199
H+++++ + +F K+ AK + + ++ WN+ F++ L E + +
Sbjct: 67 FGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHK 126
Query: 200 LKSTFWPMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILS 247
L + + WK WP V Y +P++ R+L+ V W L+
Sbjct: 127 LGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLN 174
>AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr5:6677124-6679127 FORWARD LENGTH=288
Length = 288
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
Query: 85 YEEALKRNPVLAKMAISGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSH 144
Y+ L +PVL K + ++ +GD I Q K D+ R +G L G H
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINK-TSSLDKKRTLTFTFLGLGLVGPTLH 176
Query: 145 YYYQVCEALFPFKQWWVVPAKVAFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTF 204
++Y + ++ DQ V+A I+ ++ A+ L + +N+ +L+ +
Sbjct: 177 FWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKP-SNVIPKLQQEW 235
Query: 205 WPMLTAGWKLWPFAHLVTYGVIPVEQRLLWVDSVELIWVTILS 247
+ A W+LW + + +P ++L + V L W ILS
Sbjct: 236 TGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILS 278
>AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr3:8966675-8968530 REVERSE LENGTH=235
Length = 235
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 35/208 (16%)
Query: 82 WIAYEEALKRNPVLAKMAISGVVYSIGDWIAQ---------------------------- 113
W Y+ L +PV ++ SG ++ GD AQ
Sbjct: 5 WRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIK 64
Query: 114 -CYEGKPIFEFDRTRLFRSGLVGFTLHGSLSHYYYQVCEALFPFKQWWV------VPAKV 166
++ F+ + R+ + + GF G + H++Y+ + K +V V AKV
Sbjct: 65 VKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKV 124
Query: 167 AFDQTVWAAIWNSIYFVALGLLRFESLTNIYGELKSTFWPMLTAGWKLWPFAHLVTYGVI 226
A D ++ + ++F +G ++ + LK F P L WP + + +
Sbjct: 125 AMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYV 184
Query: 227 PVEQRLLWVDSVELIWVTILSTYSNEKS 254
PV+ +LL+V+ L+ LS +K
Sbjct: 185 PVQYQLLYVNIFCLVDSAFLSWVEQQKD 212
>AT4G14305.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:8235335-8236582 REVERSE LENGTH=173
Length = 173
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 101 SGVVYSIGDWIAQCYEGKPIFEFDRTRLFRSGLVGFTLHGSLSHYYYQVCEALFPFKQWW 160
GV+ D IAQ G +F R L L GF G H+++++ + +F K+
Sbjct: 16 QGVLAGCSDAIAQKISGVKRIQFRRLLLLM--LYGFAYGGPFGHFFHKLMDTIFKGKKGN 73
Query: 161 VVPAKVAFDQTVWAAIWNSIYFVALGLLRFESL--TNIYGELKSTFWPMLTAGWKLWPFA 218
AK + + ++ WN+ F++ L E + +L + + WK WP
Sbjct: 74 STVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIV 133
Query: 219 HLVTYGVIPVEQRLLWVDSVELIWVTILS 247
V Y +P++ R+L+ V W L+
Sbjct: 134 GWVNYQYVPLQFRVLFSSFVASCWSIFLN 162