Miyakogusa Predicted Gene

Lj3g3v2769370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2769370.1 Non Chatacterized Hit- tr|B9RW76|B9RW76_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,47.83,0.0000000000002,DUF3774,Protein of unknown function
wound-induced,CUFF.44600.1
         (82 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28240.1 | Symbols:  | Wound-responsive family protein | chr4...    70   4e-13

>AT4G28240.1 | Symbols:  | Wound-responsive family protein |
          chr4:13997979-13998239 REVERSE LENGTH=86
          Length = 86

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 4/86 (4%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLFAGVVGSGVTGAMAGNPDAE 60
          MSYLN+VW+AA+    QG+ D G K K+ + S H+ + RL + +           +  +E
Sbjct: 1  MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSSDLRPLAAADLTGDSLPSE 60

Query: 61 DRLRQT----DESLRKVMYMNCWGQG 82
          +R R +    DESLR+VMY+NCW QG
Sbjct: 61 ERRRTSSSTPDESLRQVMYLNCWAQG 86