Miyakogusa Predicted Gene

Lj3g3v2744030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2744030.1 Non Chatacterized Hit- tr|I1LUC9|I1LUC9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,62.5,2e-19,DUF3774,Protein of unknown function
wound-induced,CUFF.44582.1
         (89 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10265.1 | Symbols:  | Wound-responsive family protein | chr4...   106   3e-24
AT4G10270.1 | Symbols:  | Wound-responsive family protein | chr4...   101   1e-22
AT4G33560.1 | Symbols:  | Wound-responsive family protein | chr4...    54   2e-08

>AT4G10265.1 | Symbols:  | Wound-responsive family protein |
          chr4:6373226-6373477 REVERSE LENGTH=83
          Length = 83

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 7/88 (7%)

Query: 3  SAATKAWIVAASVGAVEALKDQ-GICRWNYVLKHAQQHLKNRVGSLYQTRNLSCSSSALF 61
          S+A+K W+VAAS+GAVEALKDQ G+CRWNYV++ A Q+L+N + S+ Q + LS SSS  +
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLS-SSSIDY 60

Query: 62 ANKLKGDKAKQAEESLRTVMYLSCWGPN 89
           NK      KQAEESLRTVMYLSCWGP+
Sbjct: 61 TNK-----TKQAEESLRTVMYLSCWGPS 83


>AT4G10270.1 | Symbols:  | Wound-responsive family protein |
          chr4:6374805-6375077 FORWARD LENGTH=90
          Length = 90

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 2/89 (2%)

Query: 3  SAATKAWIVAASVGAVEALKDQ-GICRWNYVLKHAQQHLKNRVGSLYQTRNLSCSSSALF 61
          S+ +KAW VA S+GAVEALKDQ G+CRWNY+L+   QHL+N V S+ Q +  S SS +  
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 62 ANKL-KGDKAKQAEESLRTVMYLSCWGPN 89
               + +KAK+AEESLRTVMYLSCWGPN
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90


>AT4G33560.1 | Symbols:  | Wound-responsive family protein |
          chr4:16135465-16135752 FORWARD LENGTH=95
          Length = 95

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 1  MNSAATKAWIVAASVGAVEALKDQGICRWNYVLK--HAQQHLKNRVGSLYQTRNLSCSSS 58
          MN+    +W VA ++ AVE LKDQG+ RWNY+ +  H +   + R  ++    +   SSS
Sbjct: 1  MNAGKQASWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSS 60

Query: 59 ALFANKLKGDKAKQAEESLRTVMYLSCWGPN 89
          +  + + K       E S    M LSC+GP 
Sbjct: 61 SATSIRSKPLSTTPFETSFEKAMGLSCFGPT 91