Miyakogusa Predicted Gene

Lj3g3v2737370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2737370.1 Non Chatacterized Hit- tr|F6HZK7|F6HZK7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.07,0.000000000001,VHS,VHS; no description,ENTH/VHS,CUFF.44543.1
         (77 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06210.1 | Symbols:  | ENTH/VHS/GAT family protein | chr1:189...    65   1e-11
AT1G06210.2 | Symbols:  | ENTH/VHS/GAT family protein | chr1:189...    65   1e-11
AT5G16880.2 | Symbols:  | Target of Myb protein 1 | chr5:5549658...    54   3e-08
AT5G16880.1 | Symbols:  | Target of Myb protein 1 | chr5:5549658...    54   3e-08
AT5G16880.3 | Symbols:  | Target of Myb protein 1 | chr5:5549658...    54   3e-08

>AT1G06210.1 | Symbols:  | ENTH/VHS/GAT family protein |
           chr1:1897567-1898986 FORWARD LENGTH=383
          Length = 383

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 46/71 (64%)

Query: 2   QSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAESQE 61
           Q  +L LLE+   NC+  ++EVAS+K+ +++V L+ N  +D  NR+RAF+L+ AW +SQ+
Sbjct: 91  QRLSLELLEACAMNCEKVFSEVASEKVLDEMVWLIKNGEADSENRKRAFQLIRAWGQSQD 150

Query: 62  VARGGAFRHVY 72
           +     F   Y
Sbjct: 151 LTYLPVFHQTY 161


>AT1G06210.2 | Symbols:  | ENTH/VHS/GAT family protein |
           chr1:1897567-1898494 FORWARD LENGTH=279
          Length = 279

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 46/71 (64%)

Query: 2   QSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAESQE 61
           Q  +L LLE+   NC+  ++EVAS+K+ +++V L+ N  +D  NR+RAF+L+ AW +SQ+
Sbjct: 91  QRLSLELLEACAMNCEKVFSEVASEKVLDEMVWLIKNGEADSENRKRAFQLIRAWGQSQD 150

Query: 62  VARGGAFRHVY 72
           +     F   Y
Sbjct: 151 LTYLPVFHQTY 161


>AT5G16880.2 | Symbols:  | Target of Myb protein 1 |
           chr5:5549658-5551274 FORWARD LENGTH=407
          Length = 407

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 42/64 (65%)

Query: 1   MQSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAESQ 60
           +Q   L LLE+   NC+  ++EVA++++ +++V+L+D+P +  +NR +A  L+ AW ES 
Sbjct: 100 IQYLALVLLETCVKNCEKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST 159

Query: 61  EVAR 64
              R
Sbjct: 160 SELR 163


>AT5G16880.1 | Symbols:  | Target of Myb protein 1 |
           chr5:5549658-5551274 FORWARD LENGTH=407
          Length = 407

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 42/64 (65%)

Query: 1   MQSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAESQ 60
           +Q   L LLE+   NC+  ++EVA++++ +++V+L+D+P +  +NR +A  L+ AW ES 
Sbjct: 100 IQYLALVLLETCVKNCEKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST 159

Query: 61  EVAR 64
              R
Sbjct: 160 SELR 163


>AT5G16880.3 | Symbols:  | Target of Myb protein 1 |
           chr5:5549658-5551021 FORWARD LENGTH=297
          Length = 297

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 42/64 (65%)

Query: 1   MQSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAESQ 60
           +Q   L LLE+   NC+  ++EVA++++ +++V+L+D+P +  +NR +A  L+ AW ES 
Sbjct: 100 IQYLALVLLETCVKNCEKAFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGEST 159

Query: 61  EVAR 64
              R
Sbjct: 160 SELR 163