Miyakogusa Predicted Gene

Lj3g3v2736240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2736240.1 Non Chatacterized Hit- tr|I3T8Q2|I3T8Q2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.69,0,RIBOSOMAL
PROTEIN S15P/S13E,NULL; Ribosomal_S13_N,Ribosomal protein S13/S15,
N-terminal; Ribosomal_S,CUFF.44555.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00100.1 | Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosomal...   288   1e-78
AT3G60770.1 | Symbols:  | Ribosomal protein S13/S15 | chr3:22460...   285   1e-77

>AT4G00100.1 | Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosomal
           protein S13A | chr4:37172-38123 FORWARD LENGTH=151
          Length = 151

 Score =  288 bits (736), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 142/151 (94%), Positives = 146/151 (96%)

Query: 1   MGRMHSGGKGISSSALPYKRSPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHS GKGIS+SALPYKRS PSWLK  SQDV+E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>AT3G60770.1 | Symbols:  | Ribosomal protein S13/S15 |
           chr3:22460525-22461656 REVERSE LENGTH=151
          Length = 151

 Score =  285 bits (728), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/151 (93%), Positives = 145/151 (96%)

Query: 1   MGRMHSGGKGISSSALPYKRSPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHS GKGIS+SALPYKRS PSWLK   QDV+E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151