Miyakogusa Predicted Gene

Lj3g3v2735140.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2735140.2 Non Chatacterized Hit- tr|K3YFL4|K3YFL4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013032,67.21,2e-18,Sec1,Sec1-like protein; seg,NULL; PLANT
SEC1,NULL; VESICLE PROTEIN SORTING-ASSOCIATED,Sec1-like
prot,CUFF.44531.2
         (146 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02010.2 | Symbols: SEC1A | secretory 1A | chr1:348046-352197...   204   2e-53
AT1G02010.1 | Symbols: SEC1A | secretory 1A | chr1:348046-352197...   204   2e-53
AT1G12360.1 | Symbols: KEU | Sec1/munc18-like (SM) proteins supe...   159   5e-40
AT4G12120.1 | Symbols: SEC1B, ATSEC1B | Sec1/munc18-like (SM) pr...   151   2e-37

>AT1G02010.2 | Symbols: SEC1A | secretory 1A | chr1:348046-352197
           FORWARD LENGTH=660
          Length = 660

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 114/146 (78%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           +VQALPQY EQV+K+S HVE+AGKIN+IIRDT LR+LGQLEQDLVFGDAGAK+VI FLRT
Sbjct: 358 IVQALPQYGEQVDKLSTHVELAGKINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRT 417

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGGPXXXXX 120
            Q+T PE KLRLLMIYA+VYPEKFEGDK  KLMQLA+LSP DMKVISNMQL+ G      
Sbjct: 418 NQDTNPENKLRLLMIYATVYPEKFEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPENKA 477

Query: 121 XXXXXXXXXXXQKTKQGARKDRTEEE 146
                       KTKQ  RKDR+ EE
Sbjct: 478 KSGSFSLKFDAGKTKQANRKDRSGEE 503


>AT1G02010.1 | Symbols: SEC1A | secretory 1A | chr1:348046-352197
           FORWARD LENGTH=673
          Length = 673

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 114/146 (78%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           +VQALPQY EQV+K+S HVE+AGKIN+IIRDT LR+LGQLEQDLVFGDAGAK+VI FLRT
Sbjct: 358 IVQALPQYGEQVDKLSTHVELAGKINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRT 417

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGGPXXXXX 120
            Q+T PE KLRLLMIYA+VYPEKFEGDK  KLMQLA+LSP DMKVISNMQL+ G      
Sbjct: 418 NQDTNPENKLRLLMIYATVYPEKFEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPENKA 477

Query: 121 XXXXXXXXXXXQKTKQGARKDRTEEE 146
                       KTKQ  RKDR+ EE
Sbjct: 478 KSGSFSLKFDAGKTKQANRKDRSGEE 503


>AT1G12360.1 | Symbols: KEU | Sec1/munc18-like (SM) proteins
           superfamily | chr1:4201172-4206144 FORWARD LENGTH=666
          Length = 666

 Score =  159 bits (403), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 103/146 (70%), Gaps = 1/146 (0%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MVQALPQY+EQ++K+SLHVE+A K+N +IR+  LRELGQLEQDLVFGDAG K+VI +L T
Sbjct: 363 MVQALPQYSEQIDKLSLHVEIARKLNDLIREQGLRELGQLEQDLVFGDAGMKDVIKYLST 422

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGGPXXXXX 120
           ++  + E KLRLLMI A++YPEKFEG+K   LM+LAKLS DDM  ++NM LLG       
Sbjct: 423 QEEASREGKLRLLMILATIYPEKFEGEKGQNLMKLAKLSSDDMTAVNNMSLLGSAVDAKK 482

Query: 121 XX-XXXXXXXXXQKTKQGARKDRTEE 145
                        K K+  RK+R EE
Sbjct: 483 NTPGGFTLKFDLHKKKRAVRKERQEE 508


>AT4G12120.1 | Symbols: SEC1B, ATSEC1B | Sec1/munc18-like (SM)
           proteins superfamily | chr4:7256687-7260914 REVERSE
           LENGTH=662
          Length = 662

 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/147 (53%), Positives = 101/147 (68%), Gaps = 2/147 (1%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MV ALPQY+EQ++K+SLHVE+A  IN+ I +  LR+LGQLEQDLVFGDAG K+VI FL T
Sbjct: 364 MVHALPQYSEQIDKLSLHVEIARTINRTIMEQGLRDLGQLEQDLVFGDAGRKDVIKFLST 423

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGGPXXXXX 120
               + E KLRL+MI A++YP+KFEG+K  K+M+LAKLS DD+  ++NM+LLG       
Sbjct: 424 NHIISHESKLRLIMIVAAIYPKKFEGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHTECK 483

Query: 121 XXXXXXXXXXXQ--KTKQGARKDRTEE 145
                         KTK+ AR+DR  E
Sbjct: 484 KSTTGSFPLKFDVLKTKRAARRDRVGE 510