Miyakogusa Predicted Gene
- Lj3g3v2735080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2735080.1 Non Chatacterized Hit- tr|F6I576|F6I576_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.36,4e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; no description,Tetratricopeptide-like,CUFF.44524.1
(515 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 481 e-136
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 313 2e-85
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 302 4e-82
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 3e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 7e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 269 3e-72
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 268 5e-72
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 267 1e-71
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 263 2e-70
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 5e-69
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 7e-68
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 249 2e-66
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 8e-66
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 245 4e-65
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 241 9e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 240 2e-63
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 240 2e-63
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 239 3e-63
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 9e-63
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 236 2e-62
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 236 4e-62
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 233 2e-61
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 5e-61
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 7e-61
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 230 2e-60
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 227 2e-59
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 1e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 219 3e-57
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 2e-56
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 4e-56
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 216 4e-56
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 8e-56
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 214 1e-55
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 6e-55
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 210 2e-54
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 6e-54
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 207 1e-53
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 207 1e-53
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 7e-53
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 204 1e-52
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 8e-52
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 9e-52
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 200 2e-51
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 198 7e-51
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 196 2e-50
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 196 4e-50
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 9e-49
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 189 4e-48
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 3e-47
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 6e-47
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 185 7e-47
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 185 7e-47
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 7e-46
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 173 2e-43
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 8e-43
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 143 2e-34
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 100 4e-21
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 91 2e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 9e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 86 9e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 2e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 84 2e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 4e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 82 9e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 3e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 76 7e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 7e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 65 9e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 1e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 62 8e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 4e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 3e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 57 4e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 2e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 1e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/455 (52%), Positives = 321/455 (70%), Gaps = 17/455 (3%)
Query: 70 VHQVHSHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHF-----SIHTLNHS 124
+HQ+HSH TTSG S L LFN ++RCYSL P A +H L+
Sbjct: 53 IHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDH 112
Query: 125 STFFTYSSLDTFTFAFLSQACAYSNCTRF-----GIQLHALVFKVGFQFHVYVQTGLLQM 179
+ + D+FT+ FL +A S+ RF GI LH L K+GF+ HVYVQT L+ M
Sbjct: 113 NK--SLPPFDSFTYLFLLKA---SSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGM 167
Query: 180 YSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVI 239
Y +GG +++A +VFDEMP R+ VTWNV I GL G+ E AL ++M +R+VVSWT +I
Sbjct: 168 YLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTII 227
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
D Y R+++P +A+ LF +MV D I+P E+T+L I PA+ NLG +K+C SVH Y KRGF
Sbjct: 228 DGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF 287
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVEN 359
DIR+TN+LID YAKCGCI+SA +FF EIP+ RKNLVSW ++IS FA++GM +EAV
Sbjct: 288 VPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSM 347
Query: 360 FENMEKAGLRPNHVAFLSVLSACSHGGLVEEG-LKFFNKMVNDCQIVPDIRHYGCVVDML 418
F++ME+ GL+PN V +SVL+ACSHGGL EE L+FFN MVN+ +I PD++HYGC+VDML
Sbjct: 348 FKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDML 407
Query: 419 GRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDY 478
R GRLEEAEK+AL++P E V+WR LLGACSV+++ E+ +RVT K++E+E+ HGGDY
Sbjct: 408 RRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDY 466
Query: 479 VLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
VLMSNIF G GR+ DA+R R+ +D R K+PG+S
Sbjct: 467 VLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 267/426 (62%), Gaps = 10/426 (2%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
++ ++ L+N+IIR Y+ H +++ + + ++ D FTF F+ ++CA
Sbjct: 69 SNPNVFLYNSIIRAYT-----HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
G Q+H + K G +FHV + L+ MY LV+A +VFDEM R ++WN ++
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
G + G+++ A +F M D+++VSWT +I YT + ++A+ FR+M ++ GIEP E+
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEI 242
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
+L+++ P+ A LG ++L + +H YAE+RGF + + NALI++Y+KCG I A + F +
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
+ K+++SW+++ISG+A +G A A+E F M++A ++PN + FL +LSACSH G+ +
Sbjct: 302 MEG--KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 390 EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLG 449
EGL++F+ M D QI P I HYGC++D+L RAG+LE A ++ +P + + IW +LL
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGSLLS 418
Query: 450 ACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
+C N+++ + ++E+E G+YVL++NI+ +G+++D RLR++I K
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKT 478
Query: 510 PGYSLL 515
PG SL+
Sbjct: 479 PGGSLI 484
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 43/275 (15%)
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
+++ A +F+++ + +V + +I AYT + + ++++++ P T +F
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 276 PAIANLGYIKLCQSVHGYAEKRG--FNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
+ A+LG L + VHG+ K G F+V+ NALID+Y K + A + F E+ +
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVV---TENALIDMYMKFDDLVDAHKVFDEM--Y 171
Query: 334 RKNLVSWNSLISGFAMNGMAR-------------------------------EAVENFEN 362
++++SWNSL+SG+A G + EA++ F
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
M+ AG+ P+ ++ +SVL +C+ G +E G K+ + + +++M + G
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 423 RLEEAEKVALQVPHEVANDVI-WRTLLGACSVHNN 456
+ +A ++ Q+ DVI W T++ + H N
Sbjct: 291 VISQAIQLFGQME---GKDVISWSTMISGYAYHGN 322
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 265/433 (61%), Gaps = 22/433 (5%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQ 156
+N IIR +S S I ++ S F + FTF + +ACA + + G Q
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFV---EPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE---------MPHRST-----V 202
+H L K GF +V + L++MY + G + +A +F + M R V
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
WNV I+G ++ G+ + A +FD+MR RSVVSW +I Y+ A+ +FR+M + D
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
I P VTL+++ PAI+ LG ++L + +H YAE G + D+ + +ALID+Y+KCG IE
Sbjct: 270 -IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEK 327
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A F+ +P R+N+++W+++I+GFA++G A +A++ F M +AG+RP+ VA++++L+AC
Sbjct: 328 AIHVFERLP--RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
SHGGLVEEG ++F++MV+ + P I HYGC+VD+LGR+G L+EAE+ L +P + +DV
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK-PDDV 444
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVID 502
IW+ LLGAC + NVE+G+RV ++++ G YV +SN++ G + + +R +
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 503 ERIAIKIPGYSLL 515
E+ K PG SL+
Sbjct: 505 EKDIRKDPGCSLI 517
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 82/347 (23%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGL----LVEAAQVFDEMPHRSTVTWNVFINGL 211
Q+HA+ K G +L+ + L L A ++F++MP R+ +WN I G
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
+ E D++++ A+ LF +M+ + +EP T
Sbjct: 101 SESDE------------DKALI-----------------AITLFYEMMSDEFVEPNRFTF 131
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGF-----------------------------NVI 302
++ A A G I+ + +HG A K GF N+I
Sbjct: 132 PSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191
Query: 303 ---------------DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
+I + N +ID Y + G ++A F ++ ++++VSWN++ISG+
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR--QRSVVSWNTMISGY 249
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
++NG ++AVE F M+K +RPN+V +SVL A S G +E G ++ + D I D
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRID 308
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
++DM + G +E+A V ++P E N + W ++ ++H
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLPRE--NVITWSAMINGFAIH 353
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 245/423 (57%), Gaps = 11/423 (2%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+L +FN +IRC+S P +A F L S + D TF FL +A + C
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLK--SRIWP----DNITFPFLIKASSEMECVL 134
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G Q H+ + + GFQ VYV+ L+ MY+ G + A ++F +M R V+W + G
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
K G VE A +FD M R++ +W+++I+ Y + N KA+ LF M + +G+ E ++
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM-KREGVVANETVMV 253
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++ + A+LG ++ + + Y K V ++ + AL+D++ +CG IE A F+ +P+
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
+ +SW+S+I G A++G A +A+ F M G P V F +VLSACSHGGLVE+GL
Sbjct: 313 --TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ + M D I P + HYGC+VDMLGRAG+L EAE L++ H N I LLGAC
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM-HVKPNAPILGALLGACK 429
Query: 453 VHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGY 512
++ N E+ +RV +++++ H G YVL+SNI+ G++ E LR+++ E++ K PG+
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 513 SLL 515
SL+
Sbjct: 490 SLI 492
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 257/432 (59%), Gaps = 14/432 (3%)
Query: 84 HHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQ 143
H P NT L N +IR SL P+ SI + + + DTFTF F+ +
Sbjct: 72 HQPCPNT----YLHNTMIRALSLLDEPNA---HSIAITVYRKLWALCAKPDTFTFPFVLK 124
Query: 144 ACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
+ FG Q+H V GF V+V TGL+QMY G L +A ++FDEM +
Sbjct: 125 IAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNV 184
Query: 204 WNVFINGLVKWGEVELALSVFDRMR--DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV 261
WN + G K GE++ A S+ + M R+ VSWT VI Y + + +A+ +F++M+ +
Sbjct: 185 WNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRML-M 243
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
+ +EP EVTLL + A A+LG ++L + + Y + RG N + + NA+ID+YAK G I
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA-VSLNNAVIDMYAKSGNIT 302
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A F+ + + +N+V+W ++I+G A +G EA+ F M KAG+RPN V F+++LSA
Sbjct: 303 KALDVFECVNE--RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
CSH G V+ G + FN M + I P+I HYGC++D+LGRAG+L EA++V +P + AN
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFK-ANA 419
Query: 442 VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
IW +LL A +VH+++E+G+R +++++E + G+Y+L++N++ +GR+ ++ +R ++
Sbjct: 420 AIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMM 479
Query: 502 DERIAIKIPGYS 513
K+ G S
Sbjct: 480 KGIGVKKMAGES 491
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 243/421 (57%), Gaps = 11/421 (2%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
L+N +IR +S S P +++ L + + + + +TF L +AC+ +
Sbjct: 81 FLWNLMIRGFSCSDEPERSL------LLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
Q+HA + K+G++ VY L+ Y++ G A +FD +P V+WN I G VK
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G++++AL++F +M +++ +SWT +I Y + + +AL LF +M D +EP V+L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANA 253
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A A LG ++ + +H Y K +D + LID+YAKCG +E A F+ I +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIR-MDSVLGCVLIDMYAKCGEMEEALEVFKNIK--K 310
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
K++ +W +LISG+A +G REA+ F M+K G++PN + F +VL+ACS+ GLVEEG
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 395 FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
F M D + P I HYGC+VD+LGRAG L+EA++ ++P + N VIW LL AC +H
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK-PNAVIWGALLKACRIH 429
Query: 455 NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSL 514
N+E+G+ + E ++ I+ HGG YV +NI ++ A R ++ E+ K+PG S
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 515 L 515
+
Sbjct: 490 I 490
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 73/350 (20%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQM---YSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
Q+HA + K G Y T L + L A VFD T WN+ I G
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG-- 89
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
++ ++P ++L L+++M+ T
Sbjct: 90 -----------------------------FSCSDEPERSLLLYQRML-CSSAPHNAYTFP 119
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++ A +NL + +H K G+ D+ N+LI+ YA G + A F IP+
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYEN-DVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 333 -----W------------------------RKNLVSWNSLISGFAMNGMAREAVENFENM 363
W KN +SW ++ISG+ M +EA++ F M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCV-VDMLGRAG 422
+ + + P++V+ + LSAC+ G +E+G K+ + +N +I D GCV +DM + G
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMD-SVLGCVLIDMYAKCG 296
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK 472
+EEA +V + + W L+ + H + G+ K +E++K
Sbjct: 297 EMEEALEVFKNIKKKSVQ--AWTALISGYAYHGH---GREAISKFMEMQK 341
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 254/449 (56%), Gaps = 19/449 (4%)
Query: 72 QVHSHITTSGLFHHP---FHNT-STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTF 127
++H + G H FH T L LF I S++ QA + L+
Sbjct: 69 KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS----- 123
Query: 128 FTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLV 187
+ + + FTF+ L ++C+ T+ G +H V K G YV TGL+ +Y+ GG +V
Sbjct: 124 -SEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 188 EAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ 247
A +VFD MP RS V+ I K G VE A ++FD M +R +VSW ++ID Y +
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT 307
P AL LF+K++ +P E+T++ A + +G ++ + +H + + +++++
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIR-LNVKVC 297
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK-A 366
LID+Y+KCG +E A F + P RK++V+WN++I+G+AM+G +++A+ F M+
Sbjct: 298 TGLIDMYSKCGSLEEAVLVFNDTP--RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT 355
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
GL+P + F+ L AC+H GLV EG++ F M + I P I HYGC+V +LGRAG+L+
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFV 486
A + + + A+ V+W ++LG+C +H + +G+ + E ++ + + G YVL+SNI+
Sbjct: 416 AYETIKNMNMD-ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
Query: 487 GVGRYKDAERLREVIDERIAIKIPGYSLL 515
VG Y+ ++R ++ E+ +K PG S +
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 253/429 (58%), Gaps = 11/429 (2%)
Query: 88 HNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAY 147
H + ++L+FN +I+CYSL P +++ F SS D +T+A L ++C+
Sbjct: 61 HIQNPNVLVFNAMIKCYSLVGPPLESLSF------FSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 148 SNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVF 207
+ RFG +H + + GF ++ G++++Y+ GG + +A +VFDEM R+ V WN+
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
I G G+VE L +F +M +RS+VSW +I + ++ + +AL LF +M++ G +P
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID-QGFDPD 233
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
E T++T+ P A+LG + + +H AE G I + NAL+D Y K G +E+A+ F
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRPNHVAFLSVLSACSHGG 386
+++ R+N+VSWN+LISG A+NG ++ F+ M E+ + PN FL VL+ CS+ G
Sbjct: 294 RKMQ--RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRT 446
VE G + F M+ ++ HYG +VD++ R+GR+ EA K +P AN +W +
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN-ANAAMWGS 410
Query: 447 LLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIA 506
LL AC H +V++ + ++++IE G+ G+YVL+SN++ GR++D E++R ++ +
Sbjct: 411 LLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRL 470
Query: 507 IKIPGYSLL 515
K G S +
Sbjct: 471 RKSTGQSTI 479
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 268/471 (56%), Gaps = 33/471 (7%)
Query: 70 VHQVHSHITTSGLFHHPFHNTSTSLLLFNNIIRC--------YSLSPFPHQAIHFSIHTL 121
+ QV S + SGL H H LL F + C + FP+ ++ ++ T
Sbjct: 40 LKQVQSFMIVSGLSHS--HFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTA 97
Query: 122 N------HSSTFFTYSSL---------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGF 166
H+S+ F++ L + F + + ++ Y + +H +FK GF
Sbjct: 98 YSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF 157
Query: 167 QFHVYVQTGLLQMYSIG-GLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFD 225
+V VQT LL Y+ + A Q+FDEM R+ V+W ++G + G++ A+++F+
Sbjct: 158 HLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 226 RMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIK 285
M +R V SW ++ A T+ ++A++LFR+M+ I P EVT++ + A A G ++
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQ 277
Query: 286 LCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLIS 345
L + +H +A +R + D+ ++N+L+DLY KCG +E AS F+ +K+L +WNS+I+
Sbjct: 278 LAKGIHAFAYRRDLSS-DVFVSNSLVDLYGKCGNLEEASSVFKMAS--KKSLTAWNSMIN 334
Query: 346 GFAMNGMAREAVENFENMEKAG---LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
FA++G + EA+ FE M K ++P+H+ F+ +L+AC+HGGLV +G +F+ M N
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQR 462
I P I HYGC++D+LGRAGR +EA +V + + A++ IW +LL AC +H ++++ +
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK-ADEAIWGSLLNACKIHGHLDLAEV 453
Query: 463 VTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ ++ + +GG +M+N++ +G +++A R R++I + A K PG+S
Sbjct: 454 AVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 243/431 (56%), Gaps = 19/431 (4%)
Query: 88 HNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTF-----TFAFLS 142
H+ ++ L+N +I+ Y + PH++I + S D TF F+
Sbjct: 41 HHQNSCTFLYNKLIQAYYVHHQPHESI-----------VLYNLLSFDGLRPSHHTFNFIF 89
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
A A + R LH+ F+ GF+ + T L+ Y+ G L A +VFDEM R
Sbjct: 90 AASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP 149
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
WN I G + G+++ A+ +FD M ++V SWT VI +++ +AL +F M +
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
++P +T++++ PA ANLG +++ + + GYA + GF +I + NA I++Y+KCG I+
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDV 268
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A R F+E+ + R NL SWNS+I A +G EA+ F M + G +P+ V F+ +L AC
Sbjct: 269 AKRLFEELGNQR-NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
HGG+V +G + F M +I P + HYGC++D+LGR G+L+EA + +P + + V
Sbjct: 328 VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMK-PDAV 386
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVID 502
+W TLLGACS H NVEI + +E + ++E + G+ V+MSNI+ ++ R+R+++
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
Query: 503 ERIAIKIPGYS 513
+ K GYS
Sbjct: 447 KETMTKAAGYS 457
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 46/271 (16%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL-------- 271
A +FD ++ + +I AY +QP +++ L+ ++ DG+ P+ T
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASA 93
Query: 272 ---------------------------LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI 304
T+ A A LG + + V KR D+
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR-----DV 148
Query: 305 RITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENME 364
+ NA+I Y + G +++A F +P RKN+ SW ++ISGF+ NG EA++ F ME
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMP--RKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 365 K-AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
K ++PNH+ +SVL AC++ G +E G + + +I ++M + G
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRR-LEGYARENGFFDNIYVCNATIEMYSKCGM 265
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
++ A+++ ++ ++ N W +++G+ + H
Sbjct: 266 IDVAKRLFEELGNQ-RNLCSWNSMIGSLATH 295
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 247/453 (54%), Gaps = 46/453 (10%)
Query: 98 NNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQL 157
N+++R + S P + + S++T S D +TF F+ +AC+ G
Sbjct: 81 NHVLRGSAQSMKPEKTV--SLYTEMEKRGV----SPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 158 HALVFKVGFQFHVYVQTGLL-------------------------------QMYSIGGLL 186
H V + GF + YV+ L+ Y+ G +
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 187 VEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMN 246
EA ++FDEMP++ V WNV I G +K E++ A +FDR ++ VV+W +I Y
Sbjct: 195 DEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCG 254
Query: 247 QPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY----AEKRGFNVI 302
P +AL +F++M + G P VT+L++ A A LG ++ + +H Y A +
Sbjct: 255 YPKEALGIFKEMRDA-GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
I NALID+YAKCG I+ A F+ + D ++L +WN+LI G A++ A ++E FE
Sbjct: 314 GTPIWNALIDMYAKCGSIDRAIEVFRGVKD--RDLSTWNTLIVGLALH-HAEGSIEMFEE 370
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
M++ + PN V F+ V+ ACSH G V+EG K+F+ M + I P+I+HYGC+VDMLGRAG
Sbjct: 371 MQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAG 430
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMS 482
+LEEA + E N ++WRTLLGAC ++ NVE+G+ EK+L + K GDYVL+S
Sbjct: 431 QLEEAFMFVESMKIE-PNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLS 489
Query: 483 NIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
NI+ G++ +++R++ D+ K G SL+
Sbjct: 490 NIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 147/345 (42%), Gaps = 41/345 (11%)
Query: 147 YSNCT--RFGIQLHALVFKVGFQFHVYVQTGLL--QMYSIGGLLVEAAQVFDEMPHRSTV 202
+ NC R Q+HA + G ++ V L+ S+ G L A ++FDE+P
Sbjct: 19 WQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVS 78
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKM 258
N + G + + E +S++ M R V ++T V+ A +++ A K+
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 259 VEVDGI--EPTEVTLLTIFPAIANLG-------------YIKLCQSVHGYAEK------- 296
V + E + L+ +LG + GYA++
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 297 RGFNVI---DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
R F+ + D N +I KC ++SA F + K++V+WN++ISG+ G
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTE--KDVVTWNAMISGYVNCGYP 256
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRH--- 410
+EA+ F+ M AG P+ V LS+LSAC+ G +E G + ++ + I
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 411 -YGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ ++DM + G ++ A +V V + W TL+ ++H
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLS--TWNTLIVGLALH 359
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 246/452 (54%), Gaps = 40/452 (8%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+FN ++R YS S PH ++ + + F D+F+FAF+ +A R G
Sbjct: 71 FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVF-----PDSFSFAFVIKAVENFRSLRTG 125
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
Q+H K G + H++V T L+ MY G + A +VFDEM + V WN I +
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD------------ 262
+V A +FD+M R+ SW +++ Y + + A +F +M D
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 263 ------------------GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI 304
G+ P EV+L + A + G + + +HG+ EK G++ I +
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI-V 304
Query: 305 RITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENME 364
+ NALID+Y++CG + A F+ + + ++ +VSW S+I+G AM+G EAV F M
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQE-KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 365 KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRL 424
G+ P+ ++F+S+L ACSH GL+EEG +F++M I P+I HYGC+VD+ GR+G+L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 425 EEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNI 484
++A Q+P ++WRTLLGACS H N+E+ ++V +++ E++ + GD VL+SN
Sbjct: 424 QKAYDFICQMPIP-PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNA 482
Query: 485 FVGVGRYKDAERLRE-VIDERIAIKIPGYSLL 515
+ G++KD +R+ +I +RI K +SL+
Sbjct: 483 YATAGKWKDVASIRKSMIVQRIK-KTTAWSLV 513
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 254/469 (54%), Gaps = 77/469 (16%)
Query: 118 IHTLNHSSTFFTYSSL--------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFH 169
+ T + +F Y L D FTF L+++C+ S C G+QLH+ +++ GF
Sbjct: 53 LETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCAD 112
Query: 170 VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM-- 227
+YV TG++ MY+ G + A FDEMPHRS V+W I+G ++ GE++LA +FD+M
Sbjct: 113 MYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH 172
Query: 228 -RD-----------------------------RSVVSWTLVIDAYTRM------------ 245
+D ++V++WT +I Y +
Sbjct: 173 VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA 232
Query: 246 -------------------NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
QP + + LF++M ++P +VT+L++ PAI++ G + L
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ H + +++ + +++ A++D+Y+KCG IE A R F E+P+ K + SWN++I G
Sbjct: 293 GEWCHCFVQRKKLDK-KVKVCTAILDMYSKCGEIEKAKRIFDEMPE--KQVASWNAMIHG 349
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP 406
+A+NG AR A++ F M +P+ + L+V++AC+HGGLVEEG K+F+ M + +
Sbjct: 350 YALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNA 407
Query: 407 DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEK 466
I HYGC+VD+LGRAG L+EAE + +P E N +I + L AC + ++E +R+ +K
Sbjct: 408 KIEHYGCMVDLLGRAGSLKEAEDLITNMPFE-PNGIILSSFLSACGQYKDIERAERILKK 466
Query: 467 ILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+E+E + G+YVL+ N++ R+ D ++ V+ + A K G SL+
Sbjct: 467 AVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLI 515
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 89/241 (36%), Gaps = 43/241 (17%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN--C 150
+L+ +N +I Y + P + I +SLD LS A S+
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLF-------QEMQATTSLDPDDVTILSVLPAISDTGA 289
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
G H V + V V T +L MYS G + +A ++FDEMP + +WN I+G
Sbjct: 290 LSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHG 349
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
G AL +F M M+E +P E+T
Sbjct: 350 YALNGNARAALDLFVTM------------------------------MIEE---KPDEIT 376
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
+L + A + G ++ + + G N I ++DL + G ++ A +
Sbjct: 377 MLAVITACNHGGLVEEGRKWFHVMREMGLNA-KIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Query: 331 P 331
P
Sbjct: 436 P 436
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 228/382 (59%), Gaps = 9/382 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D + + +AC C ++HA V K+GF V ++++Y G LV A ++F
Sbjct: 126 DNYVITSVLKACDLKVCR----EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
DEMP R V V IN + G ++ AL +F ++ + V WT +ID R + KAL
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALE 241
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LFR+M +++ + E T + + A ++LG ++L + VH + E + + + + NALI++
Sbjct: 242 LFREM-QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF-VGNALINM 299
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y++CG I A R F+ + D K+++S+N++ISG AM+G + EA+ F +M G RPN V
Sbjct: 300 YSRCGDINEARRVFRVMRD--KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQV 357
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
+++L+ACSHGGL++ GL+ FN M + P I HYGC+VD+LGR GRLEEA +
Sbjct: 358 TLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIEN 417
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P E + ++ TLL AC +H N+E+G+++ +++ E E G YVL+SN++ G++K+
Sbjct: 418 IPIE-PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKE 476
Query: 494 AERLREVIDERIAIKIPGYSLL 515
+ +RE + + K PG S +
Sbjct: 477 STEIRESMRDSGIEKEPGCSTI 498
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 257/456 (56%), Gaps = 51/456 (11%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
++ ++N + + + P +++ + L S S ++T++ L +A +++ +R
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSV------SPSSYTYSSLVKASSFA--SR 886
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW-------- 204
FG L A ++K GF FHV +QT L+ YS G + EA +VFDEMP R + W
Sbjct: 887 FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 946
Query: 205 -----------------------NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDA 241
N ING + G +E A S+F++M + ++SWT +I
Sbjct: 947 RVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKG 1006
Query: 242 YTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV 301
Y++ + +A+A+F KM+E +GI P EVT+ T+ A A+LG +++ + VH Y + GF V
Sbjct: 1007 YSQNKRYREAIAVFYKMME-EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF-V 1064
Query: 302 IDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFE 361
+D+ I +AL+D+Y+KCG +E A F +P +KNL WNS+I G A +G A+EA++ F
Sbjct: 1065 LDVYIGSALVDMYSKCGSLERALLVFFNLP--KKNLFCWNSIIEGLAAHGFAQEALKMFA 1122
Query: 362 NMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRA 421
ME ++PN V F+SV +AC+H GLV+EG + + M++D IV ++ HYG +V + +A
Sbjct: 1123 KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKA 1182
Query: 422 GRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLM 481
G + EA ++ + E N VIW LL C +H N+ I + K++ +E + G Y L+
Sbjct: 1183 GLIYEALELIGNMEFE-PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLL 1241
Query: 482 SNIFVGVGRYKD-AE---RLREVIDERIAIKIPGYS 513
+++ R++D AE R+RE+ E+I PG S
Sbjct: 1242 VSMYAEQNRWRDVAEIRGRMRELGIEKIC---PGTS 1274
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 151/363 (41%), Gaps = 73/363 (20%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N FI + ++LA+S +M++ +V + + + + P+++L L+ +M+ D +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSV 867
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P+ T ++ A + + +S+ + K GF ++I LID Y+ G I A
Sbjct: 868 SPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFG-FHVKIQTTLIDFYSATGRIREAR 924
Query: 325 RFFQEIPDWRKNLVSWNSLISGF-------AMNGMAREAVENFE--------------NM 363
+ F E+P+ ++ ++W +++S + + N +A + E E N+
Sbjct: 925 KVFDEMPE--RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNL 982
Query: 364 EKA-----------------------------------------GLRPNHVAFLSVLSAC 382
E+A G+ P+ V +V+SAC
Sbjct: 983 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 1042
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
+H G++E G + + + V D+ +VDM + G LE A V +P + N
Sbjct: 1043 AHLGVLEIGKEVHMYTLQN-GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK--NLF 1099
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKI-LEIEKGHGGDYVLMSNIFVGVGRYKDAERL-REV 500
W +++ + H + ++ K+ +E K + +V + G + R+ R +
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 501 IDE 503
ID+
Sbjct: 1160 IDD 1162
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 227/381 (59%), Gaps = 9/381 (2%)
Query: 137 TFAFLSQACA--YSNCTRFGIQLHALVFKVGF-QFHVYVQTGLLQMYSIGGLLVEAAQVF 193
TF L C S G LH K+G + HV V T ++ MYS G +A VF
Sbjct: 73 TFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVF 132
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D M +++VTWN I+G ++ G+V+ A +FD+M +R ++SWT +I+ + + +AL
Sbjct: 133 DYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALL 192
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
FR+M ++ G++P V ++ A NLG + VH Y + F ++R++N+LIDL
Sbjct: 193 WFREM-QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKN-NVRVSNSLIDL 250
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y +CGC+E A + F + ++ +VSWNS+I GFA NG A E++ F M++ G +P+ V
Sbjct: 251 YCRCGCVEFARQVFYNME--KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F L+ACSH GLVEEGL++F M D +I P I HYGC+VD+ RAGRLE+A K+
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 434 VPHEVANDVIWRTLLGACSVH-NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+P + N+V+ +LL ACS H NN+ + +R+ + + ++ +YV++SN++ G+++
Sbjct: 369 MPMK-PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWE 427
Query: 493 DAERLREVIDERIAIKIPGYS 513
A ++R + K PG+S
Sbjct: 428 GASKMRRKMKGLGLKKQPGFS 448
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 338 VSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNK 397
VSW S I+ NG EA + F +M AG+ PNH+ F+++LS C G G +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGD 93
Query: 398 MVND--CQIVPDIRHY---GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+++ C++ D H ++ M + GR ++A V + E N V W T++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM--EDKNSVTWNTMIDGYM 151
Query: 453 VHNNVEIGQRVTEKILE 469
V+ ++ +K+ E
Sbjct: 152 RSGQVDNAAKMFDKMPE 168
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 242/424 (57%), Gaps = 42/424 (9%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
+ +++FN++ R YS P + + L D +TF L +ACA +
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL------PDNYTFPSLLKACAVAK 143
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
G QLH L K+G +VYV L+ MY+
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT---------------------------- 175
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
+ +V+ A VFDR+ + VV + +I Y R N+P +AL+LFR+M + ++P E+
Sbjct: 176 ---ECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-QGKYLKPNEI 231
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
TLL++ + A LG + L + +H YA+K F +++ ALID++AKCG ++ A F++
Sbjct: 232 TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY-VKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
+ K+ +W+++I +A +G A +++ FE M ++P+ + FL +L+ACSH G VE
Sbjct: 291 MR--YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 390 EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLG 449
EG K+F++MV+ IVP I+HYG +VD+L RAG LE+A + ++P ++WR LL
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS-PTPMLWRILLA 407
Query: 450 ACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
ACS HNN+++ ++V+E+I E++ HGGDYV++SN++ +++ + LR+V+ +R A+K+
Sbjct: 408 ACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV 467
Query: 510 PGYS 513
PG S
Sbjct: 468 PGCS 471
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 125/248 (50%), Gaps = 7/248 (2%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A +F+ M + +V + + Y+R P++ +LF +++E DGI P T ++ A A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKACA 140
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
++ + +H + K G + ++ + LI++Y +C ++SA F I + +V
Sbjct: 141 VAKALEEGRQLHCLSMKLGLD-DNVYVCPTLINMYTECEDVDSARCVFDRIVE--PCVVC 197
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
+N++I+G+A EA+ F M+ L+PN + LSVLS+C+ G ++ G K+ +K
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYA 256
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEI 459
++ ++DM + G L++A + ++ ++ + W ++ A + H E
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK--DTQAWSAMIVAYANHGKAEK 314
Query: 460 GQRVTEKI 467
+ E++
Sbjct: 315 SMLMFERM 322
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 201/325 (61%), Gaps = 7/325 (2%)
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
+G ++M G ++EA +FD+MP R ++WN + G G++E VFD M +R+V
Sbjct: 98 SGYIEM----GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
SW +I Y + + + L F++MV+ + P + T+ + A A LG + VH Y
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
E G+N +D+ + NALID+Y KCG IE A F+ I R++L+SWN++I+G A +G
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK--RRDLISWNTMINGLAAHGHG 271
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
EA+ F M+ +G+ P+ V F+ VL AC H GLVE+GL +FN M D I+P+I H GC
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 414 VVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKG 473
VVD+L RAG L +A + ++P + A+ VIW TLLGA V+ V+IG+ E+++++E
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVK-ADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR 390
Query: 474 HGGDYVLMSNIFVGVGRYKDAERLR 498
+ ++V++SNI+ GR+ DA RL+
Sbjct: 391 NPANFVMLSNIYGDAGRFDDAARLK 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 42/213 (19%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGF-QFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
T + ACA FG +H +G+ + V V+ L+ MY G + A +VF
Sbjct: 190 TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKA 251
+ R ++WN INGL G AL++F M++ + V++ V+ A M
Sbjct: 250 IKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
LA F M T +I P I + G + +
Sbjct: 310 LAYFNSM----------FTDFSIMPEIEHCGCV--------------------------V 333
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLI 344
DL ++ G + A F ++P + + V W +L+
Sbjct: 334 DLLSRAGFLTQAVEFINKMP-VKADAVIWATLL 365
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 224/417 (53%), Gaps = 42/417 (10%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D +TF + +AC+ S G ++H KVG ++V GL+ MY G L EA V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSV------------------------------ 223
DEM R V+WN + G + + AL V
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 224 -------FDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
F +M +S+VSW ++I Y + P++A+ L+ +M E DG EP V++ ++ P
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSVLP 317
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
A + + L + +HGY E++ + ++ + NALID+YAKCGC+E A F+ + ++
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKL-IPNLLLENALIDMYAKCGCLEKARDVFENMKS--RD 374
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+VSW ++IS + +G +AV F ++ +GL P+ +AF++ L+ACSH GL+EEG F
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK 434
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
M + +I P + H C+VD+LGRAG+++EA + + E N+ +W LLGAC VH++
Sbjct: 435 LMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME-PNERVWGALLGACRVHSD 493
Query: 457 VEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+IG +K+ ++ G YVL+SNI+ GR+++ +R ++ + K PG S
Sbjct: 494 TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
L+ YA + SA + F EIP+ +N++ N +I + NG E V+ F M +R
Sbjct: 80 LMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
P+H F VL ACS G + G K + + +V M G+ G L EA
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGS-ATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 430 VALQVPHEVANDVI-WRTLL 448
V ++ DV+ W +L+
Sbjct: 197 VLDEMSRR---DVVSWNSLV 213
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 220/383 (57%), Gaps = 37/383 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
DT T+ FL +A R G +H++V + GF +YVQ LL +Y+
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA------------ 167
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
G+V A VFD+M ++ +V+W VI+ + +P +ALA
Sbjct: 168 -------------------NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
L+ +M GI+P T++++ A A +G + L + VH Y K G ++ +N L+DL
Sbjct: 209 LYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDL 266
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLRPNH 372
YA+CG +E A F E+ D KN VSW SLI G A+NG +EA+E F+ ME GL P
Sbjct: 267 YARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ F+ +L ACSH G+V+EG ++F +M + +I P I H+GC+VD+L RAG++++A +
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 384
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+P + N VIWRTLLGAC+VH + ++ + +IL++E H GDYVL+SN++ R+
Sbjct: 385 SMPMQ-PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 493 DAERLREVIDERIAIKIPGYSLL 515
D +++R+ + K+PG+SL+
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLV 466
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 134/257 (52%), Gaps = 10/257 (3%)
Query: 220 ALSVFDRM-RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI 278
A VF ++ + +V W +I Y + + A +L+R+M +EP T + A+
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLV 338
+ ++L +++H + GF + I + N+L+ LYA CG + SA + F ++P+ K+LV
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLV 188
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
+WNS+I+GFA NG EA+ + M G++P+ +S+LSAC+ G + G + M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 399 VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+ + ++ ++D+ R GR+EEA+ + ++ + N V W +L+ +V+
Sbjct: 249 IK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK--NSVSWTSLIVGLAVNG--- 302
Query: 459 IGQRVTEKILEIEKGHG 475
G+ E +E G
Sbjct: 303 FGKEAIELFKYMESTEG 319
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 94 LLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRF 153
L+ +N++I ++ + P +A+ +++T +S D FT L ACA
Sbjct: 187 LVAWNSVINGFAENGKPEEAL--ALYTEMNSKGI----KPDGFTIVSLLSACAKIGALTL 240
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G ++H + KVG +++ LL +Y+ G + EA +FDEM +++V+W I G
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG--- 297
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
LA++ F + +A+ LF+ M +G+ P E+T +
Sbjct: 298 -----LAVNGFGK-----------------------EAIELFKYMESTEGLLPCEITFVG 329
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN--ALIDLYAKCGCIESASRFFQEIP 331
I A ++ G +K + + R I+ RI + ++DL A+ G ++ A + + +P
Sbjct: 330 ILYACSHCGMVK--EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ N+V W +L+ ++G + A F ++ L PNH +LS
Sbjct: 388 -MQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSGDYVLLS 433
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 221/388 (56%), Gaps = 10/388 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVG-FQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D T A + ACA + + G ++H V K + + + + MY+ + EA +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FD MP R+ + I+G + A +F +M +R+VVSW +I YT+ + +AL
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-----IDIRIT 307
+LF +++ + + PT + I A A+L + L H + K GF DI +
Sbjct: 372 SLF-CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
N+LID+Y KCGC+E F+++ + ++ VSWN++I GFA NG EA+E F M ++G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMME--RDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+P+H+ + VLSAC H G VEEG +F+ M D + P HY C+VD+LGRAG LEEA
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 428 EKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVG 487
+ + ++P + + VIW +LL AC VH N+ +G+ V EK+LE+E + G YVL+SN++
Sbjct: 549 KSMIEEMPMQ-PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAE 607
Query: 488 VGRYKDAERLREVIDERIAIKIPGYSLL 515
+G+++D +R+ + + K PG S +
Sbjct: 608 LGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 164/303 (54%), Gaps = 5/303 (1%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQ-LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D+ FA L +C S + ++ +HA V K GF +++Q L+ YS G L + QV
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FD+MP R+ TWN + GL K G ++ A S+F M +R +W ++ + + ++ +AL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
F M+ +G E + ++ A + L + VH K F + D+ I +AL+D
Sbjct: 138 CYF-AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVD 195
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y+KCG + A R F E+ D +N+VSWNSLI+ F NG A EA++ F+ M ++ + P+
Sbjct: 196 MYSKCGNVNDAQRVFDEMGD--RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
V SV+SAC+ ++ G + ++V + ++ DI VDM + R++EA +
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 433 QVP 435
+P
Sbjct: 314 SMP 316
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 230/425 (54%), Gaps = 16/425 (3%)
Query: 90 TSTSLLLFNNIIRCYSL-SPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYS 148
T+ S FN IIR +L P + F + S D TF F+ +ACA
Sbjct: 75 TNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSV------PPDFHTFPFVFKACAAK 128
Query: 149 NCTRFGI--QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNV 206
+ LH + G ++ L+++YS+ + A Q+FDE P R VT+NV
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNV 188
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
I+GLVK E+ A +FD M R +VSW +I Y +MN +A+ LF +MV + G++P
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL-GLKP 247
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
V +++ A A G + +++H Y +++ ID + L+D YAKCG I++A
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL-FIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F+ D K L +WN++I+G AM+G V+ F M +G++P+ V F+SVL CSH G
Sbjct: 307 FELCSD--KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND---VI 443
LV+E F++M + + +++HYGC+ D+LGRAG +EEA ++ Q+P + N +
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
W LLG C +H N+EI ++ ++ + GG Y +M ++ R+++ ++RE+ID
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Query: 504 RIAIK 508
+K
Sbjct: 485 DKKVK 489
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 233/423 (55%), Gaps = 9/423 (2%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+L N++IR + SP P ++ F L+ + D +T FL QAC
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDL----KPDNYTVNFLVQACTGLRMRE 125
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G+Q+H + + GF +VQTGL+ +Y+ G L +VF+ +P V +
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ G+V A +F+ M +R ++W +I Y ++ + +AL +F +++++G++ V ++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH-LMQLEGVKVNGVAMI 244
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++ A LG + + H Y E+ I +R+ L+DLYAKCG +E A F + +
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIK-ITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
KN+ +W+S ++G AMNG + +E F M++ G+ PN V F+SVL CS G V+EG
Sbjct: 304 --KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ F+ M N+ I P + HYGC+VD+ RAGRLE+A + Q+P + + +W +LL A
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK-PHAAVWSSLLHASR 420
Query: 453 VHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGY 512
++ N+E+G ++K+LE+E + G YVL+SNI+ + + +R+ + + K PG
Sbjct: 421 MYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 513 SLL 515
S++
Sbjct: 481 SVM 483
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 223/381 (58%), Gaps = 5/381 (1%)
Query: 135 TFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
+ T + AC+ ++H V + + + ++ L+ Y+ G + A ++F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
M R ++W + G V+ G ++LA + FD+M R +SWT++ID Y R ++L +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
FR+M + G+ P E T++++ A A+LG +++ + + Y +K D+ + NALID+Y
Sbjct: 356 FREM-QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN-DVVVGNALIDMY 413
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
KCGC E A + F ++ +++ +W +++ G A NG +EA++ F M+ ++P+ +
Sbjct: 414 FKCGCSEKAQKVFHDMD--QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
+L VLSAC+H G+V++ KFF KM +D +I P + HYGC+VDMLGRAG ++EA ++ ++
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDA 494
P N ++W LLGA +HN+ + + +KILE+E +G Y L+ NI+ G R+KD
Sbjct: 532 PMN-PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 495 ERLREVIDERIAIKIPGYSLL 515
+R I + K PG+SL+
Sbjct: 591 REVRRKIVDVAIKKTPGFSLI 611
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 70/368 (19%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN-CT 151
++++NN+I+ +S + + ++ L T D+ TF FL
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT------PDSHTFPFLLNGLKRDGGAL 151
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
G +LH V K G ++YVQ L++MYS+ GL+ A VFD +WN+ I+G
Sbjct: 152 ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG- 210
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
Y RM + +++ L +M E + + PT VTL
Sbjct: 211 ------------------------------YNRMKEYEESIELLVEM-ERNLVSPTSVTL 239
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF---- 327
L + A + + LC+ VH Y + +R+ NAL++ YA CG ++ A R F
Sbjct: 240 LLVLSACSKVKDKDLCKRVHEYVSECKTEP-SLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 328 -QEIPDW---------RKNL---------------VSWNSLISGFAMNGMAREAVENFEN 362
+++ W R NL +SW +I G+ G E++E F
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
M+ AG+ P+ +SVL+AC+H G +E G ++ ++ +I D+ ++DM + G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 423 RLEEAEKV 430
E+A+KV
Sbjct: 418 CSEKAQKV 425
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT + ACA+ G + + K + V V L+ MY G +A +VF
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPM 249
+M R TW + GL G+ + A+ VF +M+D S+ +++ V+ A
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIK 285
+A F KM IEP+ V + + G +K
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 214/380 (56%), Gaps = 5/380 (1%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D + AC + R+ ++ + + + ++ T L+ MY+ G + A + F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+M R+ ++G K G ++ A +FD+ + +V WT +I AY + P +AL
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+F +M GI+P V++ ++ A ANLG + + VH G ++ I NALI++
Sbjct: 331 VFEEMC-CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES-ELSINNALINM 388
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAKCG +++ F+++P R+N+VSW+S+I+ +M+G A +A+ F M++ + PN V
Sbjct: 389 YAKCGGLDATRDVFEKMP--RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F+ VL CSH GLVEEG K F M ++ I P + HYGC+VD+ GRA L EA +V
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P +N VIW +L+ AC +H +E+G+ ++ILE+E H G VLMSNI+ R++D
Sbjct: 507 MP-VASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWED 565
Query: 494 AERLREVIDERIAIKIPGYS 513
+R V++E+ K G S
Sbjct: 566 VRNIRRVMEEKNVFKEKGLS 585
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 182/364 (50%), Gaps = 21/364 (5%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
++FN +R S S P I F + H LD F+F + +A + + G
Sbjct: 77 IVFNPFLRDLSRSSEPRATILF-YQRIRHVG-----GRLDQFSFLPILKAVSKVSALFEG 130
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
++LH + FK+ +V+TG + MY+ G + A VFDEM HR VTWN I ++
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 215 GEVELALSVFDRMRDRSVVSWTL----VIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
G V+ A +F+ M+D +V+ + ++ A R A++ ++E D T +
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL- 249
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
L + A G + + + R +V ++ ++ A++ Y+KCG ++ A F +
Sbjct: 250 LTALVTMYAGAGCMDMAREFF-----RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
+K+LV W ++IS + + +EA+ FE M +G++P+ V+ SV+SAC++ G++++
Sbjct: 305 E--KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
K+ + ++ + ++ +++M + G L+ V ++P N V W +++ A
Sbjct: 363 A-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR--NVVSWSSMINA 419
Query: 451 CSVH 454
S+H
Sbjct: 420 LSMH 423
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 216/367 (58%), Gaps = 7/367 (1%)
Query: 141 LSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS 200
L A A S + G+QLH + K GF + ++Q ++ Y++ + A Q F+
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
+ N I G VK G VE A VFD+ D+ + SW +I Y + P AL LFR+M+
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI--DIRITNALIDLYAKCG 318
++P +T++++F AI++LG ++ + H Y F+ I + +T A+ID+YAKCG
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL---NFSTIPPNDNLTAAIIDMYAKCG 487
Query: 319 CIESASRFFQEIPDWRKNLVS-WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
IE+A F + + + +S WN++I G A +G A+ A++ + +++ ++PN + F+
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
VLSAC H GLVE G +F M +D I PDI+HYGC+VD+LG+AGRLEEA+++ ++P +
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVK 607
Query: 438 VANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERL 497
A+ +IW LL A H NVEI + ++ I+ HGG V++SN++ GR++D +
Sbjct: 608 -ADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALV 666
Query: 498 REVIDER 504
RE + R
Sbjct: 667 REEMRTR 673
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 41/340 (12%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
L+ T A + AC++ L +L K+ + V+V T LL MY + L +A ++
Sbjct: 171 LNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKL 230
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FDEMP R+ VTWNV +NG K G +E A +FD++ ++ +VSW +ID R NQ +AL
Sbjct: 231 FDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEAL 290
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIA-NLGYIKLCQSVHGYAEKRGFNVID-------- 303
+ +M+ G++P+EV ++ + A A ++G K Q +HG KRGF+ D
Sbjct: 291 VYYTEMLRC-GMKPSEVMMVDLLSASARSVGSSKGLQ-LHGTIVKRGFDCYDFLQATIIH 348
Query: 304 ----------------------IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN 341
I NALI + K G +E A F + D K++ SWN
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD--KDIFSWN 406
Query: 342 SLISGFAMNGMAREAVENFENM-EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN 400
++ISG+A + + A+ F M + ++P+ + +SV SA S G +EEG K + +N
Sbjct: 407 AMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG-KRAHDYLN 465
Query: 401 DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
I P+ ++DM + G +E AL + H+ N
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIE----TALNIFHQTKN 501
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 208/420 (49%), Gaps = 37/420 (8%)
Query: 94 LLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQA---CAYSNC 150
L+ F RC+ +S QA FS + H F +S + T L A CA SN
Sbjct: 4 LIRFFRSRRCWVISL---QARCFSAPSRTH----FDFSGESSDTERALVSALGSCASSND 56
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
G Q+H V K G + Y+ +L MY+ LL +A VF + + ++N+ ++G
Sbjct: 57 VTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDG 116
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
V+ + AL +FD M +RS VS+T +I Y + NQ +A+ LFR+M + GI EVT
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL-GIMLNEVT 175
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
L T+ A ++LG I C+ + A K + ++ L+ +Y C C++ A + F E+
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEG-RVFVSTNLLHMYCLCLCLKDARKLFDEM 234
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
P+ +NLV+WN +++G++ G+ +A E F+ + + + V++ +++ C ++E
Sbjct: 235 PE--RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDGCLRKNQLDE 288
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN------DVIW 444
L ++ +M+ C + P +VD+L + R + K LQ+ + D +
Sbjct: 289 ALVYYTEMLR-CGMKPS---EVMMVDLLSASARSVGSSK-GLQLHGTIVKRGFDCYDFLQ 343
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFV-GVGRYKDAERLREVIDE 503
T++ +V N++++ + E ++ D++ N + G + E+ REV D+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVK-------DHIASRNALIAGFVKNGMVEQAREVFDQ 396
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 214/382 (56%), Gaps = 35/382 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT+ L +AC R G Q+H VFK+G + V+VQ L+ MY
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYG------------ 178
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ GE+EL+ +VF+++ ++ SW+ ++ A M + L
Sbjct: 179 -------------------RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LFR M ++ E +++ A AN G + L S+HG+ R + ++I + +L+D+
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL-LRNISELNIIVQTSLVDM 278
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCGC++ A FQ++ ++N ++++++ISG A++G A+ F M K GL P+HV
Sbjct: 279 YVKCGCLDKALHIFQKME--KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
++SVL+ACSH GLV+EG + F +M+ + ++ P HYGC+VD+LGRAG LEEA +
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P E NDVIWRT L C V N+E+GQ +++L++ + GDY+L+SN++ + D
Sbjct: 397 IPIE-KNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDD 455
Query: 494 AERLREVIDERIAIKIPGYSLL 515
R R I + + PG+S++
Sbjct: 456 VARTRTEIAIKGLKQTPGFSIV 477
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 24/292 (8%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A S+F + D + +I Y + +AL + +M++ G EP T + A
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCLLKACT 143
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
L I+ + +HG K G D+ + N+LI++Y +CG +E +S F+++ K S
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEA-DVFVQNSLINMYGRCGEMELSSAVFEKLES--KTAAS 200
Query: 340 WNSLISGFAMNGMAREAVENFENM-EKAGLRPNHVAFLSVLSACSHGGLVEEGLK---FF 395
W+S++S A GM E + F M + L+ +S L AC++ G + G+ F
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHN 455
+ +++ I+ +VDM + G L++A + ++ E N++ + ++ ++H
Sbjct: 261 LRNISELNIIVQTS----LVDMYVKCGCLDKALHIFQKM--EKRNNLTYSAMISGLALHG 314
Query: 456 NVEIGQRVTEKILEIEKGHGGDYVLMSNI--------FVGVGRYKDAERLRE 499
E R+ K+ I++G D+V+ ++ V GR AE L+E
Sbjct: 315 EGESALRMFSKM--IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE 364
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 212/365 (58%), Gaps = 37/365 (10%)
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
R G +H++V + GF +YVQ LL +Y+
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYA------------------------------ 34
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
G+V A VFD+M ++ +V+W VI+ + +P +ALAL+ +M GI+P T+
Sbjct: 35 -NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTI 92
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
+++ A A +G + L + VH Y K G ++ +N L+DLYA+CG +E A F E+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLRPNHVAFLSVLSACSHGGLVEE 390
D KN VSW SLI G A+NG +EA+E F+ ME GL P + F+ +L ACSH G+V+E
Sbjct: 152 D--KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
G ++F +M + +I P I H+GC+VD+L RAG++++A + +P + N VIWRTLLGA
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGA 268
Query: 451 CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIP 510
C+VH + ++ + +IL++E H GDYVL+SN++ R+ D +++R+ + K+P
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 328
Query: 511 GYSLL 515
G+SL+
Sbjct: 329 GHSLV 333
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 99/171 (57%), Gaps = 6/171 (3%)
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSL 343
++L +++H + GF + I + N+L+ LYA CG + SA + F ++P+ K+LV+WNS+
Sbjct: 4 VRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSV 60
Query: 344 ISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ 403
I+GFA NG EA+ + M G++P+ +S+LSAC+ G + G + M+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 404 IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ ++ ++D+ R GR+EEA+ + ++ + N V W +L+ +V+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK--NSVSWTSLIVGLAVN 168
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 44/290 (15%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
L+ +N++I ++ + P +A+ +++T +S D FT L ACA
Sbjct: 53 DLVAWNSVINGFAENGKPEEAL--ALYTEMNSKGI----KPDGFTIVSLLSACAKIGALT 106
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G ++H + KVG +++ LL +Y+ G + EA +FDEM +++V+W I G
Sbjct: 107 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG-- 164
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
LA++ F + +A+ LF+ M +G+ P E+T +
Sbjct: 165 ------LAVNGFGK-----------------------EAIELFKYMESTEGLLPCEITFV 195
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN--ALIDLYAKCGCIESASRFFQEI 330
I A ++ G +K + + R I+ RI + ++DL A+ G ++ A + + +
Sbjct: 196 GILYACSHCGMVK--EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 253
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
P + N+V W +L+ ++G + A F ++ L PNH +LS
Sbjct: 254 P-MQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSGDYVLLS 300
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 227/423 (53%), Gaps = 17/423 (4%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTF----FTYSSLDTFTFAFLSQACAYSNC 150
++N IIR +S S FP AI I L S + TY S+ + L QA
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFK-AYGRLGQA------ 142
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
R G QLH +V K G + +++ +L MY G L+EA ++F M V WN I G
Sbjct: 143 -RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
K G ++ A ++FD M R+ VSW +I + R + AL +FR+M E D ++P T
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD-VKPDGFT 260
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
++++ A A LG + + +H Y + F + I +T ALID+Y KCGCIE F+
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVT-ALIDMYCKCGCIEEGLNVFECA 319
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
P +K L WNS+I G A NG A++ F +E++GL P+ V+F+ VL+AC+H G V
Sbjct: 320 P--KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHR 377
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
+FF M I P I+HY +V++LG AG LEEAE + +P E + VIW +LL A
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE-EDTVIWSSLLSA 436
Query: 451 CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIP 510
C NVE+ +R + + +++ YVL+SN + G +++A R ++ ER K
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Query: 511 GYS 513
G S
Sbjct: 497 GCS 499
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 171/387 (44%), Gaps = 57/387 (14%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIG-GLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
Q+HA + K G + +L + A VF + H++ WN I G +
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 215 GEVELALSVFDRMRDRSV------VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTE 268
E+A+S+F M S +++ V AY R+ Q L MV +G+E
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQL-HGMVIKEGLEDDS 161
Query: 269 VTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
T+ G L ++ + GF+V+ N++I +AKCG I+ A F
Sbjct: 162 FIRNTMLHMYVTCGC--LIEAWRIFLGMIGFDVV---AWNSMIMGFAKCGLIDQAQNLFD 216
Query: 329 EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
E+P ++N VSWNS+ISGF NG ++A++ F M++ ++P+ +S+L+AC++ G
Sbjct: 217 EMP--QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA--------------------- 427
E+G ++ ++ + + + ++DM + G +EE
Sbjct: 275 EQG-RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 428 ------EKVALQVPHEVA------NDVIWRTLLGACS----VHNNVEIGQRVTEK-ILEI 470
E+ A+ + E+ + V + +L AC+ VH E + + EK ++E
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP 393
Query: 471 EKGHGGDYVLMSNIFVGVGRYKDAERL 497
H Y LM N+ G G ++AE L
Sbjct: 394 SIKH---YTLMVNVLGGAGLLEEAEAL 417
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 216/383 (56%), Gaps = 40/383 (10%)
Query: 134 DTFTFAFLSQACAYSNCT----RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEA 189
D FT+ ++ +AC S CT G ++HA + + G+ HVY+ T L+ MY+
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA-------- 228
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
++G V+ A VF M R+VVSW+ +I Y + +
Sbjct: 229 -----------------------RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 250 KALALFRKMV-EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN 308
+AL FR+M+ E P VT++++ A A+L ++ + +HGY +RG + I + + +
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI-LPVIS 324
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
AL+ +Y +CG +E R F + D +++VSWNSLIS + ++G ++A++ FE M G
Sbjct: 325 ALVTMYGRCGKLEVGQRVFDRMHD--RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA 382
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
P V F+SVL ACSH GLVEEG + F M D I P I HY C+VD+LGRA RL+EA
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 429 KVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV 488
K+ + E V W +LLG+C +H NVE+ +R + ++ +E + G+YVL+++I+
Sbjct: 443 KMVQDMRTEPGPKV-WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 489 GRYKDAERLREVIDERIAIKIPG 511
+ + +R++++++ R K+PG
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPG 524
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 42/343 (12%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
SS T+ L C + + +++H + G ++ T L+ MYS G + A
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
+VFD+ R+ WN L G E L + Y +MN
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL------------------YWKMN---- 170
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
R VE D T V L + + ++ + +H + +RG++ + I L
Sbjct: 171 -----RIGVESDRFTYTYV-LKACVASECTVNHLMKGKEIHAHLTRRGYSS-HVYIMTTL 223
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGL 368
+D+YA+ GC++ AS F +P +N+VSW+++I+ +A NG A EA+ F M E
Sbjct: 224 VDMYARFGCVDYASYVFGGMP--VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC--QIVPDIRHYGCVVDMLGRAGRLEE 426
PN V +SVL AC+ +E+G ++ I+P I +V M GR G+LE
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEV 338
Query: 427 AEKVALQVPHEVANDVI-WRTLLGACSVHNNVEIGQRVTEKIL 468
++V ++ H+ DV+ W +L+ + VH + ++ E++L
Sbjct: 339 GQRVFDRM-HD--RDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 121/321 (37%), Gaps = 67/321 (20%)
Query: 72 QVHSHITTSGLFHHPFHNTS-----------------------TSLLLFNNIIRCYSLSP 108
++H+H+T G H + T+ +++ ++ +I CY+ +
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 109 FPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQF 168
+A+ + + SS ++ T + QACA G +H + + G
Sbjct: 263 KAFEALRTFREMMRETKD----SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR 228
+ V + L+ MY G L +VFD M R V+WN I+
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS------------------- 359
Query: 229 DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQ 288
+Y KA+ +F +M+ +G PT VT +++ A ++ G ++ +
Sbjct: 360 ------------SYGVHGYGKKAIQIFEEML-ANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 289 SVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFA 348
+ + I ++DL + ++ A++ Q++ V W SL+
Sbjct: 407 RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV-WGSLLGSCR 465
Query: 349 MNGMAREAVENFENMEKAGLR 369
++G N E E+A R
Sbjct: 466 IHG-------NVELAERASRR 479
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 254/473 (53%), Gaps = 69/473 (14%)
Query: 70 VHQVHSHITTSGLFHH--------------PFHNTSTSLLLF-----------NNIIRCY 104
+ Q+ SH T+G F PF + S ++ +F N IIR +
Sbjct: 19 IKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGF 78
Query: 105 SLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKV 164
+ S P A + L SS+ +D T +F +ACA + C+ QLH + +
Sbjct: 79 AGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRR 138
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVF 224
G + T LL YS G L+ A ++FDE
Sbjct: 139 GLSADSLLCTTLLDAYSKNGDLISAYKLFDE----------------------------- 169
Query: 225 DRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI 284
M R V SW +I N+ +A+ L+++M E +GI +EVT++ A ++LG +
Sbjct: 170 --MPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGIRRSEVTVVAALGACSHLGDV 226
Query: 285 KLCQSV-HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSL 343
K +++ HGY+ NVI ++NA ID+Y+KCG ++ A + F++ +K++V+WN++
Sbjct: 227 KEGENIFHGYSND---NVI---VSNAAIDMYSKCGFVDKAYQVFEQFTG-KKSVVTWNTM 279
Query: 344 ISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ 403
I+GFA++G A A+E F+ +E G++P+ V++L+ L+AC H GLVE GL FN M C+
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA--CK 337
Query: 404 IVP-DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQR 462
V +++HYGCVVD+L RAGRL EA + + + + V+W++LLGA ++++VE+ +
Sbjct: 338 GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSM-IPDPVLWQSLLGASEIYSDVEMAEI 396
Query: 463 VTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ +I E+ + GD+VL+SN++ GR+KD R+R+ ++ + KIPG S +
Sbjct: 397 ASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYI 449
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 241/488 (49%), Gaps = 95/488 (19%)
Query: 96 LFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSL-------DTFTFAFLSQACAYS 148
L N++IR ++ + P+QA FF +S + D FT+ FL +AC+
Sbjct: 84 LCNSLIRAHAQNSQPYQA-------------FFVFSEMQRFGLFADNFTYPFLLKACSGQ 130
Query: 149 NCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYS--------------------------- 181
+ +H + K+G +YV L+ YS
Sbjct: 131 SWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNS 190
Query: 182 -IGGL-----LVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
+GGL L +A ++FDEMP R ++WN ++G + E+ A +F++M +R+ VSW
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 236 TLVIDAYTRMNQPMKALALFRKM-----------------------VEVD---------G 263
+ ++ Y++ A +F KM E D G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
++ +++I A G + L +H ++ + + NAL+D+YAKCG ++ A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS-NAYVLNALLDMYAKCGNLKKA 369
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
F +IP +K+LVSWN+++ G ++G +EA+E F M + G+RP+ V F++VL +C+
Sbjct: 370 FDVFNDIP--KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
H GL++EG+ +F M +VP + HYGC+VD+LGR GRL+EA KV +P E N VI
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME-PNVVI 486
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
W LLGAC +HN V+I + V + +++++ G+Y L+SNI Y AE V D
Sbjct: 487 WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI------YAAAEDWEGVADI 540
Query: 504 RIAIKIPG 511
R +K G
Sbjct: 541 RSKMKSMG 548
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 128/264 (48%), Gaps = 15/264 (5%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
I+ L + LA+ VF+++++ +V +I A+ + +QP +A +F +M G+
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF-GLFA 115
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCG--CIESAS 324
T + A + ++ + + +H + EK G + DI + NALID Y++CG + A
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS-DIYVPNALIDCYSRCGGLGVRDAM 174
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+ F+++ + ++ VSWNS++ G G R+A F+ M + L +++ ++L +
Sbjct: 175 KLFEKMSE--RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYAR 228
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
+ + + F KM + + +V +AG +E A + ++P N V W
Sbjct: 229 CREMSKAFELFEKMPERNTV-----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 445 RTLLGACSVHNNVEIGQRVTEKIL 468
++ + ++ R+ ++++
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMV 307
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 237/435 (54%), Gaps = 53/435 (12%)
Query: 87 FHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACA 146
FH S L N+ ++ Y S P +A+ H S +F +D+F+ F + +
Sbjct: 24 FHTKS---LKSNHTLKQYLESGEPIKALLDFRHRFRQSPSF-----VDSFSVLFAIKVSS 75
Query: 147 YSNCTRF-GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWN 205
+ G Q+HALV K+GF + +QT L+ YS G + A QVFDE P +
Sbjct: 76 AQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK------ 129
Query: 206 VFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIE 265
+++V WT +I AYT ++A+ LF++M E + IE
Sbjct: 130 ------------------------QNIVLWTAMISAYTENENSVEAIELFKRM-EAEKIE 164
Query: 266 PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-IDIRITNALIDLYAKCGCIESAS 324
V + A A+LG +++ + ++ + KR + +D+ + N+L+++Y K G E A
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM------EKAGLRPNHVAFLSV 378
+ F E RK++ ++ S+I G+A+NG A+E++E F+ M + + PN V F+ V
Sbjct: 225 KLFDE--SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEV 438
L ACSH GLVEEG + F M+ D + P H+GC+VD+ R+G L++A + Q+P +
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIK- 341
Query: 439 ANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLR 498
N VIWRTLLGACS+H NVE+G+ V +I E+++ H GDYV +SNI+ G + + ++R
Sbjct: 342 PNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMR 401
Query: 499 EVIDERIAIKIPGYS 513
+ + +R ++PG S
Sbjct: 402 DRVRKR---RMPGKS 413
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 218/380 (57%), Gaps = 5/380 (1%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T L +C+ G + + V + G + + + L+ M+S G + EA ++F
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D + R+ V+W I+G + G ++++ +FD M ++ VV W +I + + ALA
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF++M + +P E+T++ A + LG + + +H Y EK + +++ + +L+D+
Sbjct: 376 LFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS-LNVALGTSLVDM 433
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAKCG I A F I +N +++ ++I G A++G A A+ F M AG+ P+ +
Sbjct: 434 YAKCGNISEALSVFHGIQT--RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F+ +LSAC HGG+++ G +F++M + + P ++HY +VD+LGRAG LEEA+++
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P E A+ +W LL C +H NVE+G++ +K+LE++ G YVL+ ++ ++D
Sbjct: 552 MPME-ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWED 610
Query: 494 AERLREVIDERIAIKIPGYS 513
A+R R +++ER KIPG S
Sbjct: 611 AKRARRMMNERGVEKIPGCS 630
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 173/394 (43%), Gaps = 76/394 (19%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQ 156
+N IR +S S P ++ L H S D FT+ L + CA + G
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCC---ESRPDHFTYPVLFKVCADLRLSSLGHM 177
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
+ V K+ + +V + M++ G + A +VFDE P R V+WN ING K GE
Sbjct: 178 ILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGE 237
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
E A+ V+ K++E +G++P +VT++ +
Sbjct: 238 AEKAIYVY--------------------------------KLMESEGVKPDDVTMIGLVS 265
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
+ + LG + + + Y ++ G + I + NAL+D+++KCG I A R F + ++
Sbjct: 266 SCSMLGDLNRGKEFYEYVKENGLRMT-IPLVNALMDMFSKCGDIHEARRIFDNLE--KRT 322
Query: 337 LVSWNSLISGFAMNGM-------------------------------AREAVENFENMEK 365
+VSW ++ISG+A G+ ++A+ F+ M+
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
+ +P+ + + LSACS G ++ G+ + ++ + + ++ +VDM + G +
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 426 EAEKVALQVPH--EVANDVIWRTLLGACSVHNNV 457
E AL V H + N + + ++G ++H +
Sbjct: 442 E----ALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 236/426 (55%), Gaps = 23/426 (5%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSL-DTFTFAFLSQACAYSNCTRFGI 155
+N +IR +S S P ++I I L + L D T+ FL ++ + + + G
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLR-------FGLLPDHMTYPFLMKSSSRLSNRKLGG 128
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
LH V K G ++ +++ L+ MY A ++FDEMPH++ VTWN ++ K G
Sbjct: 129 SLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSG 188
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
+V A VFD M +R VV+W+ +ID Y + + KAL +F +M+ + + EVT++++
Sbjct: 189 DVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVI 248
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIR------ITNALIDLYAKCGCIESASRFFQE 329
A A+LG + ++VH Y ++D+ + +LID+YAKCG I A F
Sbjct: 249 CACAHLGALNRGKTVHRY-------ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
+ + WN++I G A +G RE+++ F M ++ + P+ + FL +L+ACSHGGLV+
Sbjct: 302 ASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 361
Query: 390 EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLG 449
E FF K + + P HY C+VD+L RAG +++A ++P + ++ LL
Sbjct: 362 EAWHFF-KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML-GALLN 419
Query: 450 ACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
C H N+E+ + V +K++E++ + G YV ++N++ +++ A +RE ++++ KI
Sbjct: 420 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKI 479
Query: 510 PGYSLL 515
G+S+L
Sbjct: 480 AGHSIL 485
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 41/324 (12%)
Query: 178 QMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTL 237
++Y I LL+ + +E P V+ + + L G+V+ A ++ D W
Sbjct: 23 ELYKIHTLLITLG-LSEEEPF---VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 238 VIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKR 297
VI ++ P K+++++ +M+ G+ P +T + + + L KL S+H K
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRF-GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 298 GFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN---------------- 341
G D+ I N LI +Y SA + F E+P KNLV+WN
Sbjct: 138 GLE-WDLFICNTLIHMYGSFRDQASARKLFDEMP--HKNLVTWNSILDAYAKSGDVVSAR 194
Query: 342 ---------------SLISGFAMNGMAREAVENFENMEKAG-LRPNHVAFLSVLSACSHG 385
S+I G+ G +A+E F+ M + G + N V +SV+ AC+H
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWR 445
G + G K ++ + D + + ++DM + G + +A V + + + ++W
Sbjct: 255 GALNRG-KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 446 TLLGACSVHNNVEIGQRVTEKILE 469
++G + H + ++ K+ E
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRE 337
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 202/342 (59%), Gaps = 5/342 (1%)
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
+L Y G + A ++FD MP R+ TWN I G + G++ A ++FD+M R V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
SW +I Y++ +AL LF +M E +G + + A++ ++L + +HG
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQM-EREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
K G+ + NAL+ +Y KCG IE A+ F+E+ K++VSWN++I+G++ +G
Sbjct: 435 LVKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEMAG--KDIVSWNTMIAGYSRHGFG 491
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
A+ FE+M++ GL+P+ ++VLSACSH GLV++G ++F M D ++P+ +HY C
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 414 VVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKG 473
+VD+LGRAG LE+A + +P E + IW TLLGA VH N E+ + +KI +E
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFE-PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 610
Query: 474 HGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ G YVL+SN++ GR+ D +LR + ++ K+PGYS +
Sbjct: 611 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 132/284 (46%), Gaps = 23/284 (8%)
Query: 180 YSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVI 239
Y G EA +VF MP S+V++N I+G ++ GE ELA +FD M +R +VSW ++I
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
Y R KA LF M E D + T+ A G + +SV ++
Sbjct: 134 KGYVRNRNLGKARELFEIMPERD-----VCSWNTMLSGYAQNGCVDDARSVFDRMPEKN- 187
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVEN 359
D+ NAL+ Y + +E A F+ +W LVSWN L+ GF EA +
Sbjct: 188 ---DVSW-NALLSAYVQNSKMEEACMLFKSRENW--ALVSWNCLLGGFVKKKKIVEARQF 241
Query: 360 FENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLG 419
F++M + V++ ++++ + G ++E + F D V D+ + +V
Sbjct: 242 FDSMNVRDV----VSWNTIITGYAQSGKIDEARQLF-----DESPVQDVFTWTAMVSGYI 292
Query: 420 RAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRV 463
+ +EEA ++ ++P N+V W +L +E+ + +
Sbjct: 293 QNRMVEEARELFDKMPER--NEVSWNAMLAGYVQGERMEMAKEL 334
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 35/329 (10%)
Query: 146 AYSNCTRFGIQLHAL-VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW 204
A S+ R G AL VFK ++ G++ Y G A ++FDEMP R V+W
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
NV I G V+ + A +F+ M +R V SW ++ Y + A ++F +M E + +
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV 189
Query: 265 EPTEV-----------TLLTIFPAIANLGYIKLCQSVHGYAEKR----------GFNVID 303
+ +F + N + + G+ +K+ NV D
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 249
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
+ N +I YA+ G I+ A + F E P +++ +W +++SG+ N M EA E F+ M
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESP--VQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
+ N V++ ++L+ G +E + F+ M C+ ++ + ++ + G+
Sbjct: 308 PER----NEVSWNAMLAGYVQGERMEMAKELFDVM--PCR---NVSTWNTMITGYAQCGK 358
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ EA+ + ++P + V W ++ S
Sbjct: 359 ISEAKNLFDKMPKR--DPVSWAAMIAGYS 385
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 29/269 (10%)
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
WNV I+ ++ G AL VF RM S VS+ +I Y R + A LF +M E D
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI---DIRITNALIDLYAKCGCI 320
+ ++ + NLG + F ++ D+ N ++ YA+ GC+
Sbjct: 127 VSWN--VMIKGYVRNRNLGKAREL-----------FEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ A F +P+ KN VSWN+L+S + N EA F++ E L V++ +L
Sbjct: 174 DDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLG 227
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
+ E +FF+ M V D+ + ++ ++G+++EA ++ + P V +
Sbjct: 228 GFVKKKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESP--VQD 280
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILE 469
W ++ + VE + + +K+ E
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
L+ +F+ CA G QLH + K G++ +V LL MY G + EA +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F EM + V+WN I G + G E+AL F+ M+
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR----------------------- 503
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI-DIRITNALI 311
+G++P + T++ + A ++ G + + + Y + + V+ + + ++
Sbjct: 504 ---------EGLKPDDATMVAVLSACSHTGLVDKGRQ-YFYTMTQDYGVMPNSQHYACMV 553
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG---MAREAVENFENME 364
DL + G +E A + +P + + W +L+ ++G +A A + ME
Sbjct: 554 DLLGRAGLLEDAHNLMKNMP-FEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 221/419 (52%), Gaps = 43/419 (10%)
Query: 98 NNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQL 157
N +IR +SLS P + +L +S+ + + +F + C S G+Q+
Sbjct: 81 NTMIRAFSLSQTPCEGFRL-FRSLRRNSSL----PANPLSSSFALKCCIKSGDLLGGLQI 135
Query: 158 HALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEV 217
H +F GF + T L+ +YS +A +VFDE+P R
Sbjct: 136 HGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRD----------------- 178
Query: 218 ELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV-EVDG-IEPTEVTLLTIF 275
VSW ++ Y R + L LF KM +VDG ++P VT L
Sbjct: 179 --------------TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLAL 224
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
A ANLG + + VH + ++ G + + ++N L+ +Y++CG ++ A + F + + +
Sbjct: 225 QACANLGALDFGKQVHDFIDENGLSGA-LNLSNTLVSMYSRCGSMDKAYQVFYGMRE--R 281
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
N+VSW +LISG AMNG +EA+E F M K G+ P +LSACSH GLV EG+ FF
Sbjct: 282 NVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFF 341
Query: 396 NKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
++M + + +I P++ HYGCVVD+LGRA L++A + + + + IWRTLLGAC VH
Sbjct: 342 DRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMK-PDSTIWRTLLGACRVH 400
Query: 455 NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+VE+G+RV ++E++ GDYVL+ N + VG+++ LR ++ E+ PG S
Sbjct: 401 GDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCS 459
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 12/260 (4%)
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
++ + VF + + ++ +I A++ P + LFR + + ++
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
G + +HG GF + D + L+DLY+ C A + F EIP ++
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGF-LSDSLLMTTLMDLYSTCENSTDACKVFDEIP--KR 177
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEK---AGLRPNHVAFLSVLSACSHGGLVEEGL 392
+ VSWN L S + N R+ + F+ M+ ++P+ V L L AC++ G ++ G
Sbjct: 178 DTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG- 236
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
K + +++ + + +V M R G +++A +V + N V W L+ +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER--NVVSWTALISGLA 294
Query: 453 VHNNVEIGQRVTEKILEIEK 472
++ G+ E E+ K
Sbjct: 295 MNG---FGKEAIEAFNEMLK 311
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 217/378 (57%), Gaps = 9/378 (2%)
Query: 141 LSQACAYSNCTR-----FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
+S A S+C++ +G H V + GF+ + L+ MY A ++FD
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
M +++ VTWN + G V+ GEV+ A F+ M ++++VSW +I + + +A+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
M +G+ VT+++I A +LG + L + ++ Y EK G +D+R+ L+D+++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ-LDVRLGTTLVDMFS 516
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
+CG ESA F + + +++ +W + I AM G A A+E F++M + GL+P+ VAF
Sbjct: 517 RCGDPESAMSIFNSLTN--RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
+ L+ACSHGGLV++G + F M+ + P+ HYGC+VD+LGRAG LEEA ++ +P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 436 HEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAE 495
E NDVIW +LL AC V NVE+ EKI + G YVL+SN++ GR+ D
Sbjct: 635 ME-PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 496 RLREVIDERIAIKIPGYS 513
++R + E+ K PG S
Sbjct: 694 KVRLSMKEKGLRKPPGTS 711
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 158/327 (48%), Gaps = 53/327 (16%)
Query: 87 FHNTST--SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQA 144
F N+ + + ++N++IR Y+ S ++AI + +N S D +TF F A
Sbjct: 90 FENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGI------SPDKYTFPFGLSA 143
Query: 145 CAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW 204
CA S GIQ+H L+ K+G+ ++VQ L+ Y+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA----------------------- 180
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+ GE++ A VFD M +R+VVSWT +I Y R + A+ LF +MV + +
Sbjct: 181 --------ECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P VT++ + A A L ++ + V+ + G V D+ ++ AL+D+Y KC I+ A
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAK 291
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS- 383
R F E NL N++ S + G+ REA+ F M +G+RP+ ++ LS +S+CS
Sbjct: 292 RLFDEYG--ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 384 ----------HGGLVEEGLKFFNKMVN 400
HG ++ G + ++ + N
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICN 376
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 211/381 (55%), Gaps = 36/381 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + ACA S G Q+H + GF ++ + L+ +YS
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS------------ 312
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K GE+E A +F+R+ + V+SW +I YT MN +AL
Sbjct: 313 -------------------KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR-ITNALID 312
LF++M+ G P +VT+L+I PA A+LG I + + +H Y +KR V + + +LID
Sbjct: 354 LFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAKCG IE+A + F I K+L SWN++I GFAM+G A + + F M K G++P+
Sbjct: 413 MYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ F+ +LSACSH G+++ G F M D ++ P + HYGC++D+LG +G L + + +
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG-LFKEAEEMI 529
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+ + VIW +LL AC +H NVE+G+ E +++IE + G YVL+SNI+ GR+
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 493 DAERLREVIDERIAIKIPGYS 513
+ + R +++++ K+PG S
Sbjct: 590 EVAKTRALLNDKGMKKVPGCS 610
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 200/370 (54%), Gaps = 19/370 (5%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSL-DTFTFAFLSQACAYSNCT 151
+LL++N + R ++LS P A+ + + L +++TF F+ ++CA S
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYV-------CMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
+ G Q+H V K+G +YV T L+ MY G L +A +VFD+ PHR V++ I G
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
G +E A +FD + + VVSW +I Y +AL LF+ M++ + + P E T+
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTM 269
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
+T+ A A G I+L + VH + + GF +++I NALIDLY+KCG +E+A F+ +P
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGS-NLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
K+++SWN+LI G+ + +EA+ F+ M ++G PN V LS+L AC+H G ++ G
Sbjct: 329 --YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 392 L---KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
+ +K + +R ++DM + G +E A +V + H+ + W ++
Sbjct: 387 RWIHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSS--WNAMI 442
Query: 449 GACSVHNNVE 458
++H +
Sbjct: 443 FGFAMHGRAD 452
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 219/380 (57%), Gaps = 35/380 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D+FT L AC+ R G ++H + + + ++V +L +Y
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY------------- 541
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ GE+ ++FD M D+S+VSW VI Y + P +AL
Sbjct: 542 ------------------IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+FR+MV + GI+ ++++ +F A + L ++L + H YA K D I +LID+
Sbjct: 584 VFRQMV-LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE-DDAFIACSLIDM 641
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAK G I +S+ F + + K+ SWN++I G+ ++G+A+EA++ FE M++ G P+ +
Sbjct: 642 YAKNGSITQSSKVFNGLKE--KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 699
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
FL VL+AC+H GL+ EGL++ ++M + + P+++HY CV+DMLGRAG+L++A +V +
Sbjct: 700 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
E A+ IW++LL +C +H N+E+G++V K+ E+E +YVL+SN++ G+G+++D
Sbjct: 760 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED 819
Query: 494 AERLREVIDERIAIKIPGYS 513
++R+ ++E K G S
Sbjct: 820 VRKVRQRMNEMSLRKDAGCS 839
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 44/299 (14%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
S +L +N +I YS + + + I ++ + D FT+ + +ACA +
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLL-----PDHFTYPCVIKACAGMSD 202
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
G+ +H LV K G V+V L+ Y G + +A Q+F
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF----------------- 245
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG---IEPT 267
D M +R++VSW +I ++ ++ L +M+E +G P
Sbjct: 246 --------------DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
TL+T+ P A I L + VHG+A K + ++ + NAL+D+Y+KCGCI +A F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK-ELVLNNALMDMYSKCGCITNAQMIF 350
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG--LRPNHVAFLSVLSACSH 384
+ + KN+VSWN+++ GF+ G + M G ++ + V L+ + C H
Sbjct: 351 K--MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
VFD +R +++ W VI +Y+R + L F +M+ + P T + A A +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
+ + +VHG K G V D+ + NAL+ Y G + A + F +P+ +NLVSWNS
Sbjct: 202 DVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNS 258
Query: 343 LISGFAMNGMAREAV----ENFENMEKAGLRPNHVAFLSVLSACSHG---GLVEEGLKFF 395
+I F+ NG + E+ E E P+ ++VL C+ GL + +
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHN 455
K+ D ++V + ++DM + G + A+ + ++ N V W T++G S
Sbjct: 319 VKLRLDKELVLN----NALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAEG 372
Query: 456 NV 457
+
Sbjct: 373 DT 374
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
+L+ +N++IR +S + F ++ + N F D T + CA
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP----DVATLVTVLPVCARERE 307
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
G +H K+ + + L+ MYS G + A +F +N
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-------------MN- 353
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV-DGIEPTEV 269
+++VVSW ++ ++ + R+M+ + ++ EV
Sbjct: 354 -----------------NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
T+L P + ++ + +H Y+ K+ F V + + NA + YAKCG + A R F
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEF-VYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
I K + SWN+LI G A + R +++ M+ +GL P+ S+LSACS
Sbjct: 456 IRS--KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 213/372 (57%), Gaps = 4/372 (1%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+ F+FA L AC S + Q H V GF +V + ++ Y+ G + A +
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FDEM + W I+G K G++E A +F M +++ VSWT +I Y R +AL
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
LFRKM+ + G++P + T + A A++ ++ + +HGY + I I+ +LID
Sbjct: 297 DLFRKMIAL-GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS-SLID 354
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y+K G +E++ R F+ I D + + V WN++IS A +G+ +A+ ++M K ++PN
Sbjct: 355 MYSKSGSLEASERVFR-ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNR 413
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ +L+ACSH GLVEEGL++F M IVPD HY C++D+LGRAG +E +
Sbjct: 414 TTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIE 473
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
++P E + IW +LG C +H N E+G++ +++++++ Y+L+S+I+ G+++
Sbjct: 474 EMPFE-PDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWE 532
Query: 493 DAERLREVIDER 504
E+LR V+ +R
Sbjct: 533 LVEKLRGVMKKR 544
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 36/348 (10%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQF-HVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
A L Q C + + G +H + GF+ + + L+ MY G ++A +VFD+M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
R+ +WN ++G VK G + A VFD M +R VVSW ++ Y + +AL F
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEAL-WFY 167
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHG--------------------YAE- 295
K GI+ E + + A ++L + HG YA+
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 296 ------KRGFN---VIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
KR F+ V DI I LI YAK G +E+A + F E+P+ KN VSW +LI+G
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE--KNPVSWTALIAG 285
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP 406
+ G A++ F M G++P F S L A + + G + M+ + P
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRP 344
Query: 407 DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ ++DM ++G LE +E+V ++ + + V W T++ A + H
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERV-FRICDDKHDCVFWNTMISALAQH 391
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 217/378 (57%), Gaps = 9/378 (2%)
Query: 141 LSQACAYSNCTR-----FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
+S A S+C++ +G H V + GF+ + L+ MY A ++FD
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
M +++ VTWN + G V+ GEV+ A F+ M ++++VSW +I + + +A+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
M +G+ VT+++I A +LG + L + ++ Y EK G +D+R+ L+D+++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ-LDVRLGTTLVDMFS 516
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
+CG ESA F + + +++ +W + I AM G A A+E F++M + GL+P+ VAF
Sbjct: 517 RCGDPESAMSIFNSLTN--RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
+ L+ACSHGGLV++G + F M+ + P+ HYGC+VD+LGRAG LEEA ++ +P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 436 HEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAE 495
E NDVIW +LL AC V NVE+ EKI + G YVL+SN++ GR+ D
Sbjct: 635 ME-PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 496 RLREVIDERIAIKIPGYS 513
++R + E+ K PG S
Sbjct: 694 KVRLSMKEKGLRKPPGTS 711
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 158/327 (48%), Gaps = 53/327 (16%)
Query: 87 FHNTST--SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQA 144
F N+ + + ++N++IR Y+ S ++AI + +N S D +TF F A
Sbjct: 90 FENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGI------SPDKYTFPFGLSA 143
Query: 145 CAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW 204
CA S GIQ+H L+ K+G+ ++VQ L+ Y+
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA----------------------- 180
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+ GE++ A VFD M +R+VVSWT +I Y R + A+ LF +MV + +
Sbjct: 181 --------ECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P VT++ + A A L ++ + V+ + G V D+ ++ AL+D+Y KC I+ A
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAK 291
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS- 383
R F E NL N++ S + G+ REA+ F M +G+RP+ ++ LS +S+CS
Sbjct: 292 RLFDEYG--ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 384 ----------HGGLVEEGLKFFNKMVN 400
HG ++ G + ++ + N
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICN 376
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 90/235 (38%), Gaps = 44/235 (18%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T ++ AC + ++ + K G Q V + T L+ M+S G A +F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPM 249
+ + +R W I + G E A+ +FD M ++ + V++ + A +
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+ +F M+++ G+ P +V
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHY------------------------------------GC 612
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG---MAREAVENFE 361
++DL + G +E A + +++P N V WNSL++ + G MA A E +
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMP-MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 212/382 (55%), Gaps = 8/382 (2%)
Query: 135 TFTFAFLSQACAYSNCTRFGIQLHALVFKV-GFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+FTF+ L +AC G Q HA F++ GF F VYV ++ MY + A +VF
Sbjct: 149 SFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVF 207
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
DEMP R ++W I + G +E A +F+ + + +V+WT ++ + + +P +AL
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID-IRITNALID 312
F +M E GI EVT+ A A LG K A+K G++ D + I +ALID
Sbjct: 268 YFDRM-EKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALID 326
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRPN 371
+Y+KCG +E A F + + KN+ +++S+I G A +G A+EA+ F M + ++PN
Sbjct: 327 MYSKCGNVEEAVNVFMSMNN--KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPN 384
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
V F+ L ACSH GLV++G + F+ M + P HY C+VD+LGR GRL+EA ++
Sbjct: 385 TVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELI 444
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
+ E V W LLGAC +HNN EI + E + E+E G+Y+L+SN++ G +
Sbjct: 445 KTMSVEPHGGV-WGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDW 503
Query: 492 KDAERLREVIDERIAIKIPGYS 513
R+R++I E+ K P S
Sbjct: 504 GGVLRVRKLIKEKGLKKTPAVS 525
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 247/499 (49%), Gaps = 87/499 (17%)
Query: 70 VHQVHSHITTSGLFHHPFHNTSTSLLLF----------------------------NNII 101
+ Q H+ + +GLFH F +++ L+ F N++I
Sbjct: 55 IQQAHAFMLKTGLFHDTF--SASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVI 112
Query: 102 RCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSL-----DTFTFAFLSQACAYSNCTRFGIQ 156
R Y+ S P A+ T F L D ++F F+ +ACA G Q
Sbjct: 113 RAYANSSTPEVAL-----------TVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGG-------------------------------L 185
+H L K G V+V+ L+ +Y G L
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 186 LVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRM 245
+ EA +FDEM R+ +WN I+G G V+ A VFD M R VVSW ++ AY +
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
+ L +F KM++ +P TL+++ A A+LG + + VH Y +K G I+
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE-IEGF 340
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK 365
+ AL+D+Y+KCG I+ A F+ ++++ +WNS+IS +++G+ ++A+E F M
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATS--KRDVSTWNSIISDLSVHGLGKDALEIFSEMVY 398
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
G +PN + F+ VLSAC+H G++++ K F M + ++ P I HYGC+VD+LGR G++E
Sbjct: 399 EGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIE 458
Query: 426 EAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
EAE++ ++P + A+ ++ +LLGAC +E +R+ ++LE+ Y MSN++
Sbjct: 459 EAEELVNEIPADEAS-ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLY 517
Query: 486 VGVGRYKDAERLREVIDER 504
GR++ +VID R
Sbjct: 518 ASDGRWE------KVIDGR 530
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 218/428 (50%), Gaps = 49/428 (11%)
Query: 96 LFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGI 155
L+N +I YS + +A+ I + S+ S+ T A + AC S
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFI-GMEESAGLLANST----TMAGVVPACVRSGAFSRKE 425
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
+H V K G +VQ L+ MYS + G
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYS-------------------------------RLG 454
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD----------GIE 265
++++A+ +F +M DR +V+W +I Y AL L KM ++ ++
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 266 PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASR 325
P +TL+TI P+ A L + + +H YA K D+ + +AL+D+YAKCGC++ + +
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 326 FFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
F +IP +KN+++WN +I + M+G +EA++ M G++PN V F+SV +ACSH
Sbjct: 574 VFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWR 445
G+V+EGL+ F M D + P HY CVVD+LGRAGR++EA ++ +P + W
Sbjct: 632 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 446 TLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERI 505
+LLGA +HNN+EIG+ + ++++E YVL++NI+ G + A +R + E+
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 506 AIKIPGYS 513
K PG S
Sbjct: 752 VRKEPGCS 759
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 49/335 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVG-FQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D FT + + AC++ R G +LHA K G + +V + L+ MY QV
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY------CNCKQV 354
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
VFD M DR + W +I Y++ +AL
Sbjct: 355 LS-------------------------GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
LF M E G+ T+ + PA G +++HG+ KRG + D + N L+D
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR-DRFVQNTLMD 448
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREA---VENFENME----- 364
+Y++ G I+ A R F ++ D ++LV+WN++I+G+ + +A + +N+E
Sbjct: 449 MYSRLGKIDIAMRIFGKMED--RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 365 ---KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRA 421
+ L+PN + +++L +C+ + +G + + + + D+ +VDM +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKC 565
Query: 422 GRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
G L+ + KV Q+P + N + W ++ A +H N
Sbjct: 566 GCLQMSRKVFDQIPQK--NVITWNVIIMAYGMHGN 598
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 38/261 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D + F L +A A G Q+HA V+K G+
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD------------------------ 131
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
S N +N K G+ VFDR+ +R+ VSW +I + + AL
Sbjct: 132 ------SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGY---IKLCQSVHGYAEKRGFNVIDIRITNAL 310
FR M++ + +EP+ TL+++ A +NL + + + VH Y ++G ++ I N L
Sbjct: 186 AFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIINTL 242
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+ +Y K G + S+ ++LV+WN+++S N EA+E M G+ P
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGG--RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 371 NHVAFLSVLSACSHGGLVEEG 391
+ SVL ACSH ++ G
Sbjct: 301 DEFTISSVLPACSHLEMLRTG 321
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 33/258 (12%)
Query: 207 FINGLV----KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
IN LV K G++ + + R +V+W V+ + + Q ++AL R+MV ++
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV-LE 296
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
G+EP E T+ ++ PA ++L ++ + +H YA K G + + +AL+D+Y C + S
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK-AGLRPNHVAFLSVLSA 381
R F + D + L WN++I+G++ N +EA+ F ME+ AGL N V+ A
Sbjct: 357 GRRVFDGMFDRKIGL--WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 382 CS-----------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
C HG +V+ GL ++ V + ++DM R G+++ A ++
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLD-RDRFVQN-----------TLMDMYSRLGKIDIAMRI 462
Query: 431 ALQVPHEVANDVIWRTLL 448
++ E + V W T++
Sbjct: 463 FGKM--EDRDLVTWNTMI 478
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 9/245 (3%)
Query: 228 RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
+ RS W ++ + R N +A+ + M+ V GI+P + A+A+L ++L
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
+ +H + K G+ V + + N L++LY KCG + + F I + +N VSWNSLIS
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE--RNQVSWNSLISSL 174
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
A+E F M + P+ +SV++ACS+ + EGL ++ +
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGE 233
Query: 408 IRHY--GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA-CSVHNNVEIGQRVT 464
+ + +V M G+ G+L A L + V W T+L + C +E + +
Sbjct: 234 LNSFIINTLVAMYGKLGKL--ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 465 EKILE 469
E +LE
Sbjct: 292 EMVLE 296
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 233/485 (48%), Gaps = 71/485 (14%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
S L+N++I+ YS ++ + F ++ + D +TF + + C+ +
Sbjct: 71 SPGTYLWNHLIKGYS-----NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSI---------------------------- 182
R G +H LV ++GF V V T + Y
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 183 ---GGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVI 239
G L EA +FD MP R+ +WN ++GLVK G++ A +FD M R ++S+T +I
Sbjct: 186 YVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMI 245
Query: 240 DAYTR-------------------------------MNQPMKALALFRKMVEVDGIEPTE 268
D Y + QP +A +F +M ++P E
Sbjct: 246 DGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC-AKNVKPDE 304
Query: 269 VTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
++ + A + +G +LC+ V Y +R + ALID+ AKCG ++ A++ F+
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 329 EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
E+P +++LVS+ S++ G A++G EA+ FE M G+ P+ VAF +L C LV
Sbjct: 365 EMP--QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLV 422
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
EEGL++F M I+ HY C+V++L R G+L+EA ++ +P E A+ W +LL
Sbjct: 423 EEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFE-AHASAWGSLL 481
Query: 449 GACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIK 508
G CS+H N EI + V + E+E G YVL+SNI+ + R+ D LR+ ++E K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 509 IPGYS 513
I G S
Sbjct: 542 ICGRS 546
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
VF+R+ W +I Y+ + +++ +M+ P E T + +N G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
+++ SVHG + GF+ D+ + + +D Y KC + SA + F E+P+ +N VSW +
Sbjct: 125 QVRVGSSVHGLVLRIGFDK-DVVVGTSFVDFYGKCKDLFSARKVFGEMPE--RNAVSWTA 181
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
L+ + +G EA F+ M + L ++ +++ G + K F++M
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKR- 236
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
DI Y ++D + G + A +
Sbjct: 237 ----DIISYTSMIDGYAKGGDMVSARDL 260
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 246/475 (51%), Gaps = 44/475 (9%)
Query: 72 QVHSHITTSGLFHHPFHNTSTSLLLF----------------------NNIIRCYSLSPF 109
++H+ +TTSGL P S +L F +N+ LS F
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSF 86
Query: 110 PHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR-----FGIQLHALVFKV 164
+ L +S F +S C + C + F Q H + K+
Sbjct: 87 SRYGL------LVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVF 224
G V V L+ MY GL+ E ++F+E+ +S V+W V ++ +VKW +E VF
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 225 DRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI 284
M +R+ V+WT+++ Y + L L +MV G VTL ++ A A G +
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 285 KLCQSVHGYAEKRGF------NVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLV 338
+ + VH YA K+ + D+ + AL+D+YAKCG I+S+ F+ + ++N+V
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR--KRNVV 318
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
+WN+L SG AM+G R ++ F M + ++P+ + F +VLSACSH G+V+EG + F+ +
Sbjct: 319 TWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL 377
Query: 399 VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+ P + HY C+VD+LGRAG +EEAE + ++P N+V+ +LLG+CSVH VE
Sbjct: 378 -RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVP-PNEVVLGSLLGSCSVHGKVE 435
Query: 459 IGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
I +R+ +++++ G+ +LMSN++V GR A+ LR + +R KIPG S
Sbjct: 436 IAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 77/358 (21%)
Query: 140 FLSQACAYSNCTRFGIQLHALVFKVGFQF--HVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
L + CA+ + R G +LHA++ G + Y+ L Q Y+ G +V A ++FDE+P
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 198 --HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+ V W ++ ++G + ++ +F MR
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR--------------------------- 103
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
RK VE+D +V+++ +F A L + Q HG A K G + +++ NAL+D+Y
Sbjct: 104 RKRVEID-----DVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGV-LTSVKVCNALMDMYG 157
Query: 316 KCGCIESASRFFQEIPD-----W------------------------RKNLVSWNSLISG 346
KCG + R F+E+ + W +N V+W +++G
Sbjct: 158 KCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAG 217
Query: 347 FAMNGMAREAVENFENME-KAGLRPNHVAFLSVLSACSHGGLVEEG-------LKFFNKM 398
+ G RE +E M + G N V S+LSAC+ G + G LK M
Sbjct: 218 YLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALK-KEMM 276
Query: 399 VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
+ + D+ +VDM + G ++ + V + N V W L ++H
Sbjct: 277 MGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR--NVVTWNALFSGLAMHGK 332
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 216/372 (58%), Gaps = 8/372 (2%)
Query: 144 ACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
ACA FG Q+ + + + ++ + +L MY+ G + +A ++FD M + VT
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
W ++G + E A V + M + +V+W +I AY + +P +AL +F ++
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
++ ++TL++ A A +G ++L + +H Y +K G ++ +T+ALI +Y+KCG +E +
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR-MNFHVTSALIHMYSKCGDLEKS 419
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
F + ++++ W+++I G AM+G EAV+ F M++A ++PN V F +V ACS
Sbjct: 420 REVFNSVE--KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVAND 441
H GLV+E F++M ++ IVP+ +HY C+VD+LGR+G LE+A K A+ +P +
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS-- 535
Query: 442 VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
+W LLGAC +H N+ + + ++LE+E + G +VL+SNI+ +G++++ LR+ +
Sbjct: 536 -VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHM 594
Query: 502 DERIAIKIPGYS 513
K PG S
Sbjct: 595 RVTGLKKEPGCS 606
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 200/487 (41%), Gaps = 103/487 (21%)
Query: 70 VHQVHSHITTSGLFHHPFHNTS-------------------------TSLLLFNNIIRCY 104
+ Q H H+ +G F P+ + + +N +IR Y
Sbjct: 46 LKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 105 SLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKV 164
+ P P +I + ++ S + + +TF FL +A A + G LH + K
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCY-----PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVF 224
V+V L+ Y G L A +VF + + V+WN ING V+ G + AL +F
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 225 DRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI 284
+M E + ++ + VT++ + A A + +
Sbjct: 221 KKM--------------------------------ESEDVKASHVTMVGVLSACAKIRNL 248
Query: 285 KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD-----W------ 333
+ + V Y E+ NV ++ + NA++D+Y KCG IE A R F + + W
Sbjct: 249 EFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 334 ------------------RKNLVSWNSLISGFAMNGMAREAVENFENME-KAGLRPNHVA 374
+K++V+WN+LIS + NG EA+ F ++ + ++ N +
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
+S LSAC+ G +E G ++ + + I + ++ M + G LE++ +V V
Sbjct: 368 LVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGH-GGDYVLMSNIFVG---VGR 490
E + +W ++G ++H G + ++++ + + V +N+F G
Sbjct: 427 --EKRDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 491 YKDAERL 497
+AE L
Sbjct: 482 VDEAESL 488
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 94 LLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRF 153
++ +N +I Y + P++A+ H L L+ T ACA
Sbjct: 329 IVAWNALISAYEQNGKPNEAL-IVFHELQLQKNM----KLNQITLVSTLSACAQVGALEL 383
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G +H+ + K G + + +V + L+ MYS G L ++ +VF+ + R W+ I GL
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 214 WGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
G A+ +F +M++ +V V++T V A + +A +LF +M GI P E
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 270 TLLTIFPAIANLGYIK 285
I + GY++
Sbjct: 504 HYACIVDVLGRSGYLE 519
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 222/387 (57%), Gaps = 10/387 (2%)
Query: 134 DTFTFAFLSQAC-AYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D +TF+ L AC A S+ +G +HA++ K G+ V + +L Y+ G +A +
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
+ + + V+WN I+ +K GE E AL VF ++++V+WT +I Y R +AL
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQAL 322
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
F +M++ G++ + A + L + + +HG GF + NAL++
Sbjct: 323 RFFVEMMK-SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY-AYVGNALVN 380
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
LYAKCG I+ A R F +I + K+LVSWN+++ F ++G+A +A++ ++NM +G++P++
Sbjct: 381 LYAKCGDIKEADRAFGDIAN--KDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
V F+ +L+ CSH GLVEEG F MV D +I ++ H C++DM GR G L EA+ +A
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 433 QVPHEV---ANDVIWRTLLGACSVHNNVEIGQRVTEKILEI-EKGHGGDYVLMSNIFVGV 488
V +N+ W TLLGACS H + E+G+ V+ K+L+I E +VL+SN++
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTHWHTELGREVS-KVLKIAEPSEEMSFVLLSNLYCST 557
Query: 489 GRYKDAERLREVIDERIAIKIPGYSLL 515
GR+K+ E +R + ER K PG S +
Sbjct: 558 GRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 164/363 (45%), Gaps = 45/363 (12%)
Query: 128 FTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLV 187
F+ + D ++F + CA +FG ++ +LV + GF + V L+ MY +
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 188 EAAQVFDEM--PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRM 245
A +VF +M R+ VTW + + + E AL VF M R +W ++I +
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI-ANLGYIKLCQSVHGYAEKRGFNVIDI 304
+ L+LF++M+E + +P T ++ A A+ + + VH K G++ +
Sbjct: 183 GKLESCLSLFKEMLESE-FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSA-V 240
Query: 305 RITNALIDLYAKCGCIESASRFFQEIP-----DW------------------------RK 335
N+++ Y K G + A R + I W K
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
N+V+W ++I+G+ NG +A+ F M K+G+ +H A+ +VL ACS L+ G
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG---- 356
Query: 396 NKMVNDCQIVPDIRHYGCV----VDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
KM++ C I + Y V V++ + G ++EA++ + ++ + V W T+L A
Sbjct: 357 -KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK--DLVSWNTMLFAF 413
Query: 452 SVH 454
VH
Sbjct: 414 GVH 416
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 59/329 (17%)
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
I L K G + A VFD M + V+W ++ +Y+R+ +A+ALF ++ D +P
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA-KPD 69
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+ + I A+LG +K + + + GF + + N+LID+Y KC SA++ F
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGF-CASLPVNNSLIDMYGKCSDTLSANKVF 128
Query: 328 QEIPDWRKNLVSWNSL-------------------------------ISGFAMNGMAREA 356
+++ +N V+W SL ISG A G
Sbjct: 129 RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESC 188
Query: 357 VENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI----VPDIRHYG 412
+ F+ M ++ +P+ F S+++ACS + + +MV+ + +
Sbjct: 189 LSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 413 CVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEI-- 470
V+ + G ++A + + EV V W +++ AC ++IG+ TEK LE+
Sbjct: 245 SVLSFYTKLGSRDDAMRELESI--EVLTQVSWNSIIDAC-----MKIGE--TEKALEVFH 295
Query: 471 ---EKGHGGDYVLMSNIFVGVGRYKDAER 496
EK + V + + G GR D E+
Sbjct: 296 LAPEK----NIVTWTTMITGYGRNGDGEQ 320
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 8/149 (5%)
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
+R+T+ + L AK G I SA + F +P+ + V+WN++++ ++ G+ +EA+ F +
Sbjct: 5 VRLTSKIASL-AKSGRIASARQVFDGMPEL--DTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND--CQIVPDIRHYGCVVDMLGRA 421
+ +P+ +F ++LS C+ G V+ G K + ++ C +P ++DM G+
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLP---VNNSLIDMYGKC 118
Query: 422 GRLEEAEKVALQVPHEVANDVIWRTLLGA 450
A KV + + N+V W +LL A
Sbjct: 119 SDTLSANKVFRDMCCDSRNEVTWCSLLFA 147
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 227/426 (53%), Gaps = 44/426 (10%)
Query: 96 LFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGI 155
+++ +IR S S PH + + + + S L TF FL AC + G
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYL---TFHFLIVACLKACFFSVGK 136
Query: 156 QLHALVFKVG-FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
Q+H V K G F +VQTG+L++Y LL++A +VFDE+P
Sbjct: 137 QIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPD-------------- 182
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
VV W ++++ Y R + L +FR+M+ V G+EP E ++ T
Sbjct: 183 -----------------VVKWDVLMNGYVRCGLGSEGLEVFREML-VKGLEPDEFSVTTA 224
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A A +G + + +H + +K+ + D+ + AL+D+YAKCGCIE+A F+++ R
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT--R 282
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLRPNHVAFLSVLSACSHGGLVEEGLK 393
+N+ SW +LI G+A G A++A+ E +E+ G++P+ V L VL+AC+HGG +EEG
Sbjct: 283 RNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRS 342
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSV 453
M +I P HY C+VD++ RAGRL++A + ++P + V W LL C
Sbjct: 343 MLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV-WGALLNGCRT 401
Query: 454 HNNVEIGQRVTEKILEIEKGH----GGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
H NVE+G+ + +L++EKG+ V +SNI+ V R +A ++R +I++R K
Sbjct: 402 HKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461
Query: 510 PGYSLL 515
PG+S+L
Sbjct: 462 PGWSVL 467
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 10/293 (3%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV--EVDGIEPTEVTLLTIFPA 277
A S+FD + + + +I +R +QP L F MV E + I P+ +T + A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 278 IANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNL 337
+ + + +H + K G + D + ++ +Y + + A + F EIP + ++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIP--QPDV 183
Query: 338 VSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNK 397
V W+ L++G+ G+ E +E F M GL P+ + + L+AC+ G + +G
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEF 243
Query: 398 MVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNV 457
+ I D+ +VDM + G +E A +V ++ N W L+G + +
Sbjct: 244 VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR--NVFSWAALIGGYAAYGYA 301
Query: 458 EIGQRVTEKILEIEKGHGGDYVLMSNIFVGV---GRYKDAERLREVIDERIAI 507
+ E+ LE E G D V++ + G ++ + E ++ R I
Sbjct: 302 KKAMTCLER-LEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEI 353
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/472 (30%), Positives = 243/472 (51%), Gaps = 38/472 (8%)
Query: 70 VHQVHSHITTSGLFHHPFHNTSTSLLLFNNIIRCYS-----------LSPFPHQAIH-FS 117
V Q+H HI SG S L+N++++ Y + PH + F+
Sbjct: 149 VKQIHCHIIVSGCL-------SLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 118 IHTLNHSSTFFTYSSL-------------DTFTFAFLSQACAYSNCTRFGIQLHALVFKV 164
+ + ++ F+ +L D +T L C + + R G +H + +
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 165 G--FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALS 222
G + ++ + LL MY A + FD M + +WN + G V+ G++E A +
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKAL-ALFRKMVEVDGIEPTEVTLLTIFPAIANL 281
VFD+M R +VSW ++ Y++ + + LF +M V+ ++P VT++++ AN
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 282 GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN 341
G + + VHG + D +++ALID+Y KCG IE A F+ + K++ W
Sbjct: 382 GELSHGRWVHGLVIRLQLKG-DAFLSSALIDMYCKCGIIERAFMVFKTATE--KDVALWT 438
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND 401
S+I+G A +G ++A++ F M++ G+ PN+V L+VL+ACSH GLVEEGL FN M +
Sbjct: 439 SMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Query: 402 CQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQ 461
P+ HYG +VD+L RAGR+EEA+ + + + +W ++L AC ++E +
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Query: 462 RVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
++L++E G YVL+SNI+ VGR+ +++ RE ++ R K GYS
Sbjct: 559 LALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 198/338 (58%), Gaps = 4/338 (1%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
++ Y G + +A +FD MP R VTW I+G K G V A ++FD+M R VV++
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
++ Y + M+AL +F M + + P + TL+ + PAIA LG + +H Y
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
++ F + ++ ALID+Y+KCG I+ A F+ I + K++ WN++I G A++G+
Sbjct: 378 EKQF-YLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN--KSIDHWNAMIGGLAIHGLGES 434
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVV 415
A + +E+ L+P+ + F+ VL+ACSH GLV+EGL F M +I P ++HYGC+V
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 416 DMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHG 475
D+L R+G +E A+ + ++P E NDVIWRT L ACS H E G+ V + ++ +
Sbjct: 495 DILSRSGSIELAKNLIEEMPVE-PNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Query: 476 GDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
YVL+SN++ G +KD R+R ++ ER KIPG S
Sbjct: 554 SSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCS 591
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 191/405 (47%), Gaps = 48/405 (11%)
Query: 85 HPFHNTSTSL------LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTF 138
H +H S S L+N +I+ +S P QA+ L + S+D F+
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGV------SVDKFSL 124
Query: 139 AFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPH 198
+ + +AC+ + G+Q+H + K G +++Q L+ +Y G L + Q+FD MP
Sbjct: 125 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 184
Query: 199 RSTVTWNVFINGLVKWGEVELALSVFDR--MRDRSVVSWTLVIDAYTRMNQPMK-ALALF 255
R +V++N I+G VK G + A +FD M ++++SW +I Y + + + A LF
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLF 244
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE--KRGFNVI---DIRITNAL 310
M E D I + GY+K HG E K F+V+ D+ +
Sbjct: 245 ADMPEKDLISWNSMI----------DGYVK-----HGRIEDAKGLFDVMPRRDVVTWATM 289
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG-LR 369
ID YAK G + A F ++P +++V++NS+++G+ N EA+E F +MEK L
Sbjct: 290 IDGYAKLGFVHHAKTLFDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 347
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
P+ + VL A + G + + + +V Q + ++DM + G ++
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK-QFYLGGKLGVALIDMYSKCGSIQH--- 403
Query: 430 VALQVPHEVANDVI--WRTLLGACSVHNNVEIGQRVTEKILEIEK 472
A+ V + N I W ++G ++H +G+ + +L+IE+
Sbjct: 404 -AMLVFEGIENKSIDHWNAMIGGLAIHG---LGESAFDMLLQIER 444
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 218/384 (56%), Gaps = 6/384 (1%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S D FT A + ACA G Q+H+ + GF V L+ MYS G + A +
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 192 VFDEMPHRSTVT--WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
+ ++ + + ++G +K G++ A ++F ++DR VV+WT +I Y +
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+A+ LFR MV G P TL + ++L + + +HG A K G + + ++NA
Sbjct: 396 EAINLFRSMVG-GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG-EIYSVSVSNA 453
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
LI +YAK G I SASR F I ++ VSW S+I A +G A EA+E FE M GLR
Sbjct: 454 LITMYAKAGNITSASRAFDLIR-CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
P+H+ ++ V SAC+H GLV +G ++F+ M + +I+P + HY C+VD+ GRAG L+EA++
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 430 VALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVG 489
++P E + V W +LL AC VH N+++G+ E++L +E + G Y ++N++ G
Sbjct: 573 FIEKMPIE-PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 490 RYKDAERLREVIDERIAIKIPGYS 513
++++A ++R+ + + K G+S
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 161/337 (47%), Gaps = 35/337 (10%)
Query: 128 FTYSSLDTFTFAFLSQACAYSNCTRFGIQL-HALVFKVGFQFHVYVQTGLLQMYSIGGLL 186
+ S+L L ++ SN RF QL H V K G F VY+ L+ +YS G
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSN-GRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 187 VEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMN 246
+ A ++FDEMP R+ +WN ++ K G+++ FD++ R VSWT +I Y +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 247 QPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRI 306
Q KA+ + MV+ +GIEPT+ TL + ++A ++ + VH + K G ++ +
Sbjct: 126 QYHKAIRVMGDMVK-EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG-NVSV 183
Query: 307 TNALIDLYAKCGCIESASRFF-----QEIPDW------------------------RKNL 337
+N+L+++YAKCG A F ++I W +++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 338 VSWNSLISGFAMNGMAREAVENFENMEKAG-LRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
V+WNS+ISGF G A++ F M + L P+ SVLSAC++ + G + +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
+V + I ++ M R G +E A ++ Q
Sbjct: 304 HIVTTGFDISGIV-LNALISMYSRCGGVETARRLIEQ 339
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 34/364 (9%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
FT + + A + C G ++H+ + K+G + +V V LL MY+ G + A VFD
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
M R +WN I ++ G+++LA++ F++M +R +V+W +I + + ++AL +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
KM+ + P TL ++ A ANL + + + +H + GF++ I + NALI +Y+
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMYS 325
Query: 316 KCGCIESASRFFQE--IPDWR-----------------------------KNLVSWNSLI 344
+CG +E+A R ++ D + +++V+W ++I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 345 SGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI 404
G+ +G EA+ F +M G RPN ++LS S + G + V +I
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 405 VPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVT 464
+ ++ M +AG + A + A + + V W +++ A + H + E +
Sbjct: 446 YS-VSVSNALITMYAKAGNITSASR-AFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 465 EKIL 468
E +L
Sbjct: 504 ETML 507
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 219/385 (56%), Gaps = 11/385 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + + + S G +H V K G V + ++ MY G + +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS----VVSWTLVIDAYTRMNQPM 249
++ N +I GL + G V+ AL +F+ ++++ VVSWT +I + + +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID-IRITN 308
+AL LFR+M +V G++P VT+ ++ PA N+ + +S HG+A + +++D + + +
Sbjct: 371 EALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR--VHLLDNVHVGS 427
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
ALID+YAKCG I + F +P KNLV WNSL++GF+M+G A+E + FE++ + L
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMP--TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
+P+ ++F S+LSAC GL +EG K+F M + I P + HY C+V++LGRAG+L+EA
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 429 KVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV 488
+ ++P E + +W LL +C + NNV++ + EK+ +E + G YVL+SNI+
Sbjct: 546 DLIKEMPFE-PDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 489 GRYKDAERLREVIDERIAIKIPGYS 513
G + + + +R ++ K PG S
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 168/372 (45%), Gaps = 42/372 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D+ L + CA + + G Q+H + G +VQ + MY G + +A +VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPM 249
D M + VT + + + G +E + + M + ++VSW ++ + R
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+A+ +F+K+ + G P +VT+ ++ P++ + + + + +HGY K+G + D + +A
Sbjct: 235 EAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL-LKDKCVISA 292
Query: 310 LIDLYAKC-------------------------------GCIESASRFFQEIPD--WRKN 336
+ID+Y K G ++ A F+ + N
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+VSW S+I+G A NG EA+E F M+ AG++PNHV S+L AC + + G
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
V ++ ++ ++DM + GR+ ++ V +P N V W +L+ S+H
Sbjct: 413 FAVR-VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP--TKNLVCWNSLMNGFSMHGK 469
Query: 457 VEIGQRVTEKIL 468
+ + E ++
Sbjct: 470 AKEVMSIFESLM 481
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 117/272 (43%), Gaps = 11/272 (4%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
Q HA + K G Q Y+ L+ YS +A V +P + +++ I L K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKM---VEVDGIEPTEVTLL 272
++ VF RM ++ + V+ ++ + A + +++ V G++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++F G + + V + D+ +AL+ YA+ GC+E R E+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDK-----DVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 333 --WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
N+VSWN ++SGF +G +EAV F+ + G P+ V SVL + ++
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
G + + V ++ D ++DM G++G
Sbjct: 271 G-RLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 225/427 (52%), Gaps = 44/427 (10%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+++ +IR S S PH + + + + T S L TF FL AC + G
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYL---TFHFLIVACLKACFFSVG 135
Query: 155 IQLHALVFKVG-FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
Q+H V K G F +VQTG+L++Y LL +A +VFDE+P
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPD------------- 182
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
VV W ++++ Y R + L +F++M+ V GIEP E ++ T
Sbjct: 183 ------------------VVKWDVLMNGYVRCGLGSEGLEVFKEML-VRGIEPDEFSVTT 223
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
A A +G + + +H + +K+ + D+ + AL+D+YAKCGCIE+A F+++
Sbjct: 224 ALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT-- 281
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLRPNHVAFLSVLSACSHGGLVEEGL 392
R+N+ SW +LI G+A G A++A + +E+ G++P+ V L VL+AC+HGG +EEG
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
M I P HY C+VD++ RAGRL++A + ++P + V W LL C
Sbjct: 342 TMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASV-WGALLNGCR 400
Query: 453 VHNNVEIGQRVTEKILEIEKGH----GGDYVLMSNIFVGVGRYKDAERLREVIDERIAIK 508
H NVE+G+ + +L++EKG+ V +SNI+ V R +A ++R +I++R K
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 509 IPGYSLL 515
PG+SLL
Sbjct: 461 TPGWSLL 467
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV--EVDGIEPTEVTLLTIFPA 277
A S+FD + + + +I +R +QP L F MV E + I P+ +T + A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 278 IANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNL 337
+ + + +H + K G + D + ++ +Y + + A + F EIP + ++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIP--QPDV 183
Query: 338 VSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNK 397
V W+ L++G+ G+ E +E F+ M G+ P+ + + L+AC+ G + +G K+ ++
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG-KWIHE 242
Query: 398 MVNDCQ-IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
V + I D+ +VDM + G +E A +V ++ N W L+G + +
Sbjct: 243 FVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR--NVFSWAALIGGYAAYGY 300
Query: 457 VEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV---GRYKDAERLREVIDERIAI 507
+ ++I E E G D V++ + G ++ + E ++ R I
Sbjct: 301 AKKATTCLDRI-EREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGI 353
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 221/417 (52%), Gaps = 14/417 (3%)
Query: 89 NTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYS 148
+ + L+ +N +I Y F +A+ ++ LD FT+ + +ACA +
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI------ELDEFTYPSVIRACATA 299
Query: 149 NCTRFGIQLHALVFK-VGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVF 207
+ G Q+HA V + F FH L+ +Y G EA +F++MP + V+WN
Sbjct: 300 GLLQLGKQVHAYVLRREDFSFHF--DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
++G V G + A +F M++++++SW ++I + L LF M + +G EP
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM-KREGFEPC 416
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+ + A LG Q H K GF+ + NALI +YAKCG +E A + F
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS-SLSAGNALITMYAKCGVVEEARQVF 475
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGL 387
+ +P + VSWN+LI+ +G EAV+ +E M K G+RP+ + L+VL+ACSH GL
Sbjct: 476 RTMPCL--DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGL 533
Query: 388 VEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTL 447
V++G K+F+ M +I P HY ++D+L R+G+ +AE V +P + + IW L
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE-IWEAL 592
Query: 448 LGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDER 504
L C VH N+E+G +K+ + H G Y+L+SN+ G++++ R+R+++ +R
Sbjct: 593 LSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 54/418 (12%)
Query: 134 DTFTFA-FLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGG----LLVE 188
D FTFA L+ ++ + +Q HA K G + V L+ +YS LL
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 189 AAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR-SVVSWTLVIDAYTRMNQ 247
A +VFDE+ + +W + G VK G +L + + M D +V++ +I Y
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT 307
+AL + R+MV GIE E T ++ A A G ++L + VH Y +R
Sbjct: 267 YQEALEMVRRMVS-SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFD 323
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
N+L+ LY KCG + A F+++P K+LVSWN+L+SG+ +G EA F+ M++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMP--AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE-- 379
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKFFNKM---------------VNDCQIV------- 405
N ++++ ++S + G EEGLK F+ M + C ++
Sbjct: 380 --KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 406 ------------PDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSV 453
+ ++ M + G +EEA +V +P + V W L+ A
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP--CLDSVSWNALIAALGQ 495
Query: 454 HNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAI-KIP 510
H + V E++L +KG D + + + ++ R+ D + +IP
Sbjct: 496 HGHGAEAVDVYEEML--KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 49/332 (14%)
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
+H + GFQ ++ L+ +Y L A Q+FDE+ + ++G G+
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 217 VELALSVFDR----MRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ LA VF++ MRD V + +I ++ N A+ LF KM + +G +P T
Sbjct: 96 ITLARGVFEKAPVCMRD--TVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFKPDNFTFA 152
Query: 273 TIFPAIANLGYI-KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC----IESASRFF 327
++ +A + K C H A K G I ++NAL+ +Y+KC + SA + F
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYI-TSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 328 QEI--PDWR----------KN------------------LVSWNSLISGFAMNGMAREAV 357
EI D R KN LV++N++ISG+ G +EA+
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 358 ENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDM 417
E M +G+ + + SV+ AC+ GL++ G + ++ +V +
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSL 329
Query: 418 LGRAGRLEEAEKVALQVPHEVANDVI-WRTLL 448
+ G+ +EA + ++P A D++ W LL
Sbjct: 330 YYKCGKFDEARAIFEKMP---AKDLVSWNALL 358
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 239/450 (53%), Gaps = 17/450 (3%)
Query: 70 VHQVHSHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFT 129
+ Q+H+ + TS T ++N +IR Y + ++ H L +
Sbjct: 30 IKQIHTVLLTSNALVASRWKTKC---VYNTLIRSYLTTGEYKTSLALFTHMLA------S 80
Query: 130 YSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEA 189
+ + TF L +A S +G+ LH K GF + +VQT ++ Y G L +
Sbjct: 81 HVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESS 140
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
++FD++ + V N ++ + GE++ A F RM VVSWT VI+ +++
Sbjct: 141 RKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 250 KALALFRKMVEVDG--IEPTEVTLLTIFPAIANL--GYIKLCQSVHGYAEKRGFNVIDIR 305
KAL +F +M++ + I P E T +++ + AN G I+L + +HGY + ++
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI-ILTTT 259
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK 365
+ AL+D+Y K G +E A F +I D K + +WN++IS A NG ++A+E FE M+
Sbjct: 260 LGTALLDMYGKAGDLEMALTIFDQIRD--KKVCAWNAIISALASNGRPKQALEMFEMMKS 317
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
+ + PN + L++L+AC+ LV+ G++ F+ + ++ +I+P HYGCVVD++GRAG L
Sbjct: 318 SYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLV 377
Query: 426 EAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
+A +P E V+ LLGAC +H N E+G V ++++ ++ H G YV +S
Sbjct: 378 DAANFIQSLPFEPDASVL-GALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFN 436
Query: 486 VGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ +AE++R+ + E KIP YS+L
Sbjct: 437 ALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 244/488 (50%), Gaps = 51/488 (10%)
Query: 28 ISHKTLHPIEYPKATLPPFSPNXXXXXXXXXXXXXXXXXXXAVHQVHSHITTSGLF-HHP 86
I H+ H + +++ P SP V ++H I S + +P
Sbjct: 23 IFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLAR--VRRIHGDIFRSRILDQYP 80
Query: 87 FHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACA 146
L+NNI+R Y P AI + + ST D ++ + +A
Sbjct: 81 I------AFLWNNIMRSYIRHESPLDAIQVYLGMVR--STVLP----DRYSLPIVIKAAV 128
Query: 147 YSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNV 206
+ G +LH++ ++GF + ++G + +Y
Sbjct: 129 QIHDFTLGKELHSVAVRLGFVGDEFCESGFITLY-------------------------- 162
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
K GE E A VFD +R + SW +I + +A+ +F M + G+EP
Sbjct: 163 -----CKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDM-KRSGLEP 216
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYA-EKRGFNVIDIRITNALIDLYAKCGCIESASR 325
+ T++++ + LG + L +H + + DI + N+LID+Y KCG ++ AS
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 326 FFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
F+E+ ++N+VSW+S+I G+A NG EA+E F M + G+RPN + F+ VLSAC HG
Sbjct: 277 IFEEMR--QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWR 445
GLVEEG +F M ++ ++ P + HYGC+VD+L R G+L+EA+KV ++P + N ++W
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMK-PNVMVWG 393
Query: 446 TLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERI 505
L+G C +VE+ + V ++E+E + G YV+++N++ G +KD ER+R+++ +
Sbjct: 394 CLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKK 453
Query: 506 AIKIPGYS 513
KIP YS
Sbjct: 454 VAKIPAYS 461
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 204/384 (53%), Gaps = 35/384 (9%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S D +T + CA G ++H + + F ++V L+ MY+ G + EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
VF E MR + ++SW +I Y++ +A
Sbjct: 454 VFSE-------------------------------MRVKDIISWNTIIGGYSKNCYANEA 482
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
L+LF ++E P E T+ + PA A+L + +HGY + G+ D + N+L+
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRHVANSLV 541
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
D+YAKCG + A F +I K+LVSW +I+G+ M+G +EA+ F M +AG+ +
Sbjct: 542 DMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
++F+S+L ACSH GLV+EG +FFN M ++C+I P + HY C+VDML R G L +A +
Sbjct: 600 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
+P + IW LL C +H++V++ ++V EK+ E+E + G YVLM+NI+ ++
Sbjct: 660 ENMPIP-PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKW 718
Query: 492 KDAERLREVIDERIAIKIPGYSLL 515
+ +RLR+ I +R K PG S +
Sbjct: 719 EQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 164/320 (51%), Gaps = 38/320 (11%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D++TF+ +S++ + G QLH + K GF V L+ Y
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY------------ 240
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
+K V+ A VFD M +R V+SW +I+ Y K L
Sbjct: 241 -------------------LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
++F +M+ V GIE T++++F A+ I L ++VH K F+ D R N L+D
Sbjct: 282 SVFVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLD 339
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y+KCG ++SA F+E+ D +++VS+ S+I+G+A G+A EAV+ FE ME+ G+ P+
Sbjct: 340 MYSKCGDLDSAKAVFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+VL+ C+ L++EG K ++ + + + DI ++DM + G ++EAE V
Sbjct: 398 YTVTAVLNCCARYRLLDEG-KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 433 QVPHEVANDVIWRTLLGACS 452
++ V + + W T++G S
Sbjct: 457 EM--RVKDIISWNTIIGGYS 474
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 36/299 (12%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
+D T + Q CA S + G ++ + GF + + L MY+ G L EA++
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
VFDE+ + WN+ +N L K G+ +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFS-------------------------------GS 179
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
+ LF+KM+ G+E T + + ++L + + +HG+ K GF + + N+L+
Sbjct: 180 IGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN-SVGNSLV 237
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
Y K ++SA + F E+ + ++++SWNS+I+G+ NG+A + + F M +G+ +
Sbjct: 238 AFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+SV + C+ L+ G + V C D R ++DM + G L+ A+ V
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLDMYSKCGDLDSAKAV 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 54/262 (20%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
++ +N II YS + + ++A+ + L F S D T A + ACA +
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSL-FNLLLEEKRF----SPDERTVACVLPACASLSAFD 516
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G ++H + + G+ +V L+ MY+ G L+ A +FD++ + V+W V I G
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
G + A+++F++MR GIE E++ +
Sbjct: 577 MHGFGKEAIALFNQMRQA--------------------------------GIEADEISFV 604
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVI--DIRIT------NALIDLYAKCGCIESAS 324
++ A ++ G + G+ R FN++ + +I ++D+ A+ G + A
Sbjct: 605 SLLYACSHSGLVD-----EGW---RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAY 656
Query: 325 RFFQEIPDWRKNLVSWNSLISG 346
RF + +P + W +L+ G
Sbjct: 657 RFIENMP-IPPDATIWGALLCG 677
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 224/427 (52%), Gaps = 17/427 (3%)
Query: 95 LLFNNIIRCYS---LSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCT 151
L+N IIR SP H I + NH S D TF FL +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRV------SPDFHTFPFLLPSFHNPLHL 78
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
G + HA + G +V+T LL MYS G L A +VFD+ + WN +N
Sbjct: 79 PLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAY 138
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG----IEPT 267
K G ++ A +FD M +R+V+SW+ +I+ Y + +AL LFR+M + P
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN 198
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
E T+ T+ A LG ++ + VH Y +K IDI + ALID+YAKCG +E A R F
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE-IDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLRPNHVAFLSVLSACSHGG 386
+ +K++ +++++I AM G+ E + F M + + PN V F+ +L AC H G
Sbjct: 258 NALGS-KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRT 446
L+ EG +F M+ + I P I+HYGC+VD+ GR+G ++EAE +P E + +IW +
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME-PDVLIWGS 375
Query: 447 LLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIA 506
LL + +++ + ++++E++ + G YVL+SN++ GR+ + + +R ++ +
Sbjct: 376 LLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
Query: 507 IKIPGYS 513
K+PG S
Sbjct: 436 NKVPGCS 442
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 216/421 (51%), Gaps = 43/421 (10%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+ + +I YS P A+ F L F YS + FT + + +A A
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLR-----FGYSP-NEFTLSSVIKAAAAERRGC 178
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G QLH K GF +V+V + LL +Y+ GL+ +A VFD
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA----------------- 221
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ R+ VSW +I + R + KAL LF+ M+ DG P+ +
Sbjct: 222 --------------LESRNDVSWNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYA 266
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++F A ++ G+++ + VH Y K G ++ N L+D+YAK G I A + F +
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF-AGNTLLDMYAKSGSIHDARKIFDRLA- 324
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
++++VSWNSL++ +A +G +EAV FE M + G+RPN ++FLSVL+ACSH GL++EG
Sbjct: 325 -KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
++ M D IVP+ HY VVD+LGRAG L A + ++P E IW+ LL AC
Sbjct: 384 HYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE-PTAAIWKALLNACR 441
Query: 453 VHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGY 512
+H N E+G E + E++ G +V++ NI+ GR+ DA R+R+ + E K P
Sbjct: 442 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 501
Query: 513 S 513
S
Sbjct: 502 S 502
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 144/284 (50%), Gaps = 13/284 (4%)
Query: 176 LLQMYSIGGLLVEA----AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
LL+ ++ LL++ A + + V N +N K G +E A VF++M R
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 232 VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVH 291
V+WT +I Y++ ++P AL F +M+ G P E TL ++ A A +H
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 292 GYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
G+ K GF+ ++ + +AL+DLY + G ++ A F + +N VSWN+LI+G A
Sbjct: 185 GFCVKCGFDS-NVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNALIAGHARRS 241
Query: 352 MAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY 411
+A+E F+ M + G RP+H ++ S+ ACS G +E+G M+ + +
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG- 300
Query: 412 GCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLGACSVH 454
++DM ++G + +A K+ ++ DV+ W +LL A + H
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRL---AKRDVVSWNSLLTAYAQH 341
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 211/388 (54%), Gaps = 10/388 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF + + S + G QLH K+G +V+V + +L Y L +A + F
Sbjct: 92 NEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCF 151
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D+ + V+ I+G +K E E ALS+F M +RSVV+W VI +++ + +A+
Sbjct: 152 DDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVN 211
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEK---RGFNVIDIRITNAL 310
F M+ + P E T AI+N+ +S+H A K + FNV + N+L
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVF---VWNSL 268
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK-AGLR 369
I Y+KCG +E + F ++ + ++N+VSWNS+I G+A NG EAV FE M K LR
Sbjct: 269 ISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI--VPDIRHYGCVVDMLGRAGRLEEA 427
PN+V L VL AC+H GL++EG +FNK VND + ++ HY C+VDML R+GR +EA
Sbjct: 329 PNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEA 388
Query: 428 EKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVG 487
E++ +P + W+ LLG C +H+N + + KILE++ YV++SN +
Sbjct: 389 EELIKSMPLDPGIG-FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSA 447
Query: 488 VGRYKDAERLREVIDERIAIKIPGYSLL 515
+ +++ +R + E + G S +
Sbjct: 448 MENWQNVSLIRRKMKETGLKRFTGCSWI 475
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A VFD + + V+S T VI + + ++ ++A F++++ + GI P E T T+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL-GIRPNEFTFGTVIGSST 104
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
+KL + +H YA K G ++ + +A+++ Y K + A R F + D N+VS
Sbjct: 105 TSRDVKLGKQLHCYALKMGL-ASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD--PNVVS 161
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
+LISG+ EA+ F M + + V + +V+ S G EE + F M+
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 400 NDCQIVPDIRHYGCVVDMLGRA---GRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
+ ++P+ + C + + G + A++ + N +W +L+ S N
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 457 VE 458
+E
Sbjct: 278 ME 279
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 211/395 (53%), Gaps = 48/395 (12%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
SS D TF F+ +ACAY G Q+H + K GF VYV GL+ +Y G L A
Sbjct: 147 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 206
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
+VFDEMP RS V+WN I+ LV++GE +
Sbjct: 207 KVFDEMPERSLVSWNSMIDALVRFGEYD-------------------------------S 235
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY-AEKRGFNV-IDIRITN 308
AL LFR+M EP T+ ++ A A LG + L H + K +V +D+ + N
Sbjct: 236 ALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN 293
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKA 366
+LI++Y KCG + A + FQ + +++L SWN++I GFA +G A EA+ F+ M ++
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQ--KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
+RPN V F+ +L AC+H G V +G ++F+ MV D I P + HYGC+VD++ RAG + E
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHN-NVEIGQRVTEKIL----EIEKGHG---GDY 478
A + + +P + + VIWR+LL AC +VE+ + + I+ + E +G G Y
Sbjct: 412 AIDMVMSMPMK-PDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 470
Query: 479 VLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
VL+S ++ R+ D +R+++ E K PG S
Sbjct: 471 VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTR-MNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ +V A VFD + + S W +I A +++ +A L+RKM+E P + T
Sbjct: 96 FSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFP 155
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
+ A A + + VH K GF D+ + N LI LY CGC++ A + F E+P+
Sbjct: 156 FVLKACAYIFGFSEGKQVHCQIVKHGFGG-DVYVNNGLIHLYGSCGCLDLARKVFDEMPE 214
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
++LVSWNS+I G A++ F M+++ P+ SVLSAC+ G + G
Sbjct: 215 --RSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 393 KFFNKMVNDC--QIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
++ C + D+ +++M + G L AE+V
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 225/423 (53%), Gaps = 33/423 (7%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+++ + ++IR Y L+ A+ L + LD+ + AC+
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
+H+ V K GF V V LL Y+ GG
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG---------------------------- 232
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
G V +A +FD++ D+ VS+ ++ Y + +A +FR++V+ + +TL
Sbjct: 233 -EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLS 291
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
T+ A+++ G +++ + +H + G D+ + ++ID+Y KCG +E+A + F + +
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLE-DDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
KN+ SW ++I+G+ M+G A +A+E F M +G+RPN++ F+SVL+ACSH GL EG
Sbjct: 351 --KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
++FN M + P + HYGC+VD+LGRAG L++A + +Q + +IW +LL AC
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL-IQRMKMKPDSIIWSSLLAACR 467
Query: 453 VHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGY 512
+H NVE+ + ++ E++ + G Y+L+S+I+ GR+KD ER+R ++ R +K PG+
Sbjct: 468 IHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGF 527
Query: 513 SLL 515
SLL
Sbjct: 528 SLL 530
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 148/323 (45%), Gaps = 50/323 (15%)
Query: 145 CAYSNCTRF-----GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR 199
CA C+ G Q H F G+Q ++V + L+ MYS
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST----------------- 123
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV 259
G++E A VFD + R++VSWT +I Y + A++LF+ ++
Sbjct: 124 --------------CGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 260 -----EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
+ D + + L+++ A + + L +S+H + KRGF+ + + N L+D Y
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR-GVSVGNTLLDAY 228
Query: 315 AKC--GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP-N 371
AK G + A + F +I D K+ VS+NS++S +A +GM+ EA E F + K + N
Sbjct: 229 AKGGEGGVAVARKIFDQIVD--KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFN 286
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
+ +VL A SH G + G K + V + D+ ++DM + GR+E A K
Sbjct: 287 AITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 432 LQVPHEVANDVIWRTLLGACSVH 454
++ ++ N W ++ +H
Sbjct: 346 DRMKNK--NVRSWTAMIAGYGMH 366
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 222 SVFDRMRDRS-VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIAN 280
++F+R D++ V SW VI R +AL F M ++ + PT + A ++
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSS 88
Query: 281 LGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSW 340
L I + H A G+ DI +++ALI +Y+ CG +E A + F EIP ++N+VSW
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQS-DIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSW 145
Query: 341 NSLISGFAMNGMAREAVENF------ENMEKAGLRPNHVAFLSVLSACSH---GGLVE 389
S+I G+ +NG A +AV F EN + + + + +SV+SACS GL E
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 200/341 (58%), Gaps = 6/341 (1%)
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
T +L Y G + +A ++F+ MP + + N I+GL + GE+ A VFD M++R+
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
SW VI + R ++AL LF +++ G+ PT TL++I A+L + + VH
Sbjct: 298 SWQTVIKIHERNGFELEALDLF-ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
+ F+V D+ + + L+ +Y KCG + + F P K+++ WNS+ISG+A +G+
Sbjct: 357 LVRCQFDV-DVYVASVLMTMYIKCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHGLG 413
Query: 354 REAVENFENMEKAG-LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYG 412
EA++ F M +G +PN V F++ LSACS+ G+VEEGLK + M + + P HY
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 413 CVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK 472
C+VDMLGRAGR EA ++ + E + +W +LLGAC H+ +++ + +K++EIE
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVE-PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 473 GHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ G Y+L+SN++ GR+ D LR+++ R+ K PG S
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 167/412 (40%), Gaps = 89/412 (21%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNV-------------- 206
VF + + +V T L++ Y G + A +F +MP ++ V+W V
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 207 -----------------FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
I+GL K G V+ A +FD M +RSV++WT ++ Y + N+
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD 220
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR---I 306
A +F M E TEV+ ++ G I+ + + F V+ ++
Sbjct: 221 DARKIFDVMP-----EKTEVSWTSMLMGYVQNGRIEDAEEL--------FEVMPVKPVIA 267
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
NA+I + G I A R F + + +N SW ++I NG EA++ F M+K
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKE--RNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRL-- 424
G+RP +S+LS C+ + G + ++V CQ D+ ++ M + G L
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVR-CQFDVDVYVASVLMTMYIKCGELVK 384
Query: 425 -----------------------------EEAEKVALQVP---HEVANDVIWRTLLGACS 452
EEA KV ++P N+V + L ACS
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 453 VHNNVEIGQRVTEKILEI--EKGHGGDYVLMSNIFVGVGRYKDAERLREVID 502
VE G ++ E + + K Y M ++ GR+ +A E+ID
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA---MEMID 493
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 25/262 (9%)
Query: 188 EAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ 247
+A ++FDEMP R+ ++WN ++G +K GE++ A VFD M +R+VVSWT ++ Y +
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI-KLCQSVHGYAEKRGFNVIDIRI 306
A +LF KM E +V+ + G I C+ +K D
Sbjct: 126 VDVAESLFWKMP-----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK------DNIA 174
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
++I K G ++ A F E+ + +++++W ++++G+ N +A + F+ M +
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSE--RSVITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
V++ S+L G +E+ + F M V + ++ LG+ G + +
Sbjct: 233 ----TEVSWTSMLMGYVQNGRIEDAEELFEVMP-----VKPVIACNAMISGLGQKGEIAK 283
Query: 427 AEKVALQVPHEVANDVIWRTLL 448
A +V + ND W+T++
Sbjct: 284 ARRVFDSMKER--NDASWQTVI 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
T NV I L + G++ A +FD +S+ SW ++ Y P A LF +M +
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD-- 76
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
N+I N L+ Y K G I+
Sbjct: 77 ------------------------------------RNIIS---WNGLVSGYMKNGEIDE 97
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A + F +P+ +N+VSW +L+ G+ NG A F M + N V++ +L
Sbjct: 98 ARKVFDLMPE--RNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGF 151
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYG--CVVDMLGRAGRLEEAEKVALQVPHEVAN 440
G +++ K + +++PD + ++ L + GR++EA ++ ++
Sbjct: 152 LQDGRIDDACKLY-------EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV- 203
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREV 500
+ W T++ +N V+ +++ + + E + + M +V GR +DAE L EV
Sbjct: 204 -ITWTTMVTGYGQNNRVDDARKIFDVMPEKTE---VSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 501 I 501
+
Sbjct: 260 M 260
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 18/162 (11%)
Query: 123 HSSTFFTYSSLDTF-------------TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFH 169
H F +LD F T + CA G Q+HA + + F
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365
Query: 170 VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM-- 227
VYV + L+ MY G LV++ +FD P + + WN I+G G E AL VF M
Sbjct: 366 VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPL 425
Query: 228 ---RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
+ V++ + A + + L ++ M V G++P
Sbjct: 426 SGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 194/325 (59%), Gaps = 6/325 (1%)
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
AQV RS+ ++ VK G+VE A VF + D+ +V+W+ ++ Y + +
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANL-GYIKLCQSVHGYAEKRGFNVIDIRITN 308
A+ +F ++ + GI+P E T +I A + + HG+A K + + +++
Sbjct: 477 AAIKMFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS-SLCVSS 534
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
AL+ +YAK G IESA F+ + K+LVSWNS+ISG+A +G A +A++ F+ M+K +
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQRE--KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
+ + V F+ V +AC+H GLVEEG K+F+ MV DC+I P H C+VD+ RAG+LE+A
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 429 KVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV 488
KV +P+ A IWRT+L AC VH E+G+ EKI+ ++ YVL+SN++
Sbjct: 653 KVIENMPNP-AGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Query: 489 GRYKDAERLREVIDERIAIKIPGYS 513
G +++ ++R++++ER K PGYS
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYS 736
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 35/232 (15%)
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
FG QLH K GF V V T L+ Y G + +VFDEM
Sbjct: 111 FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM---------------- 154
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
++R+VV+WT +I Y R + + L LF +M + +G +P T
Sbjct: 155 ---------------KERNVVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFA 198
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
+A G VH K G + I ++N+LI+LY KCG + A F +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKT-IPVSNSLINLYLKCGNVRKARILFDKTE- 256
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
K++V+WNS+ISG+A NG+ EA+ F +M +R + +F SV+ C++
Sbjct: 257 -VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 34/248 (13%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
++FTFA A G+Q+H +V K G + V L+ +Y
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY------------- 239
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+K G V A +FD+ +SVV+W +I Y ++AL
Sbjct: 240 ------------------LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+F M ++ + +E + ++ ANL ++ + +H K GF + D I AL+
Sbjct: 282 MFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVA 339
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+KC + A R F+EI N+VSW ++ISGF N EAV+ F M++ G+RPN
Sbjct: 340 YSKCTAMLDALRLFKEIG-CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 374 AFLSVLSA 381
+ +L+A
Sbjct: 399 TYSVILTA 406
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 206 VFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIE 265
++ G V + A ++FD+ R S+ ++ ++R + +A LF + + G+E
Sbjct: 32 IYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL-GME 90
Query: 266 PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASR 325
++ A L + +H K GF + D+ + +L+D Y K + +
Sbjct: 91 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 326 FFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
F E+ + +N+V+W +LISG+A N M E + F M+ G +PN F + L +
Sbjct: 150 VFDEMKE--RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 386 GLVEEGLK 393
G+ GL+
Sbjct: 208 GVGGRGLQ 215
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 55/221 (24%)
Query: 134 DTFTFAFLSQACAYSNCTRF-GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+ FTF+ + CA +N + G Q H K + V + LL MY+ G + A +V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F + V+WN I+G + G+ AL VF M+ R
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK--------------------- 591
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI--DIRI---- 306
V++DG VT + +F A + G ++ ++ F+++ D +I
Sbjct: 592 ------VKMDG-----VTFIGVFAACTHAGLVE--------EGEKYFDIMVRDCKIAPTK 632
Query: 307 --TNALIDLYAKCGCIESASRFFQEIPD------WRKNLVS 339
+ ++DLY++ G +E A + + +P+ WR L +
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 231/467 (49%), Gaps = 33/467 (7%)
Query: 72 QVHSHITTSGLFHHP------------FHNTSTSLLLFNNIIRCYSLSPF---------P 110
QVH+ + TSG F F ++S ++ ++ +I + Y +P P
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLVSSSP 99
Query: 111 HQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHV 170
QA+ F L F + D++TF L + C G H K G +
Sbjct: 100 KQALGFYFDILR-----FGFVP-DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVL 153
Query: 171 YVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR 230
VQ L+ MY+ G L A ++F E+P R V+WN I G+V+ G+V A +FD M D+
Sbjct: 154 PVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK 213
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
+++SW ++I AY N P +++LFR+MV G + E TL+ + A +K +SV
Sbjct: 214 NIISWNIMISAYLGANNPGVSISLFREMVRA-GFQGNESTLVLLLNACGRSARLKEGRSV 272
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMN 350
H + R F + I ALID+Y KC + A R F + +N V+WN +I ++
Sbjct: 273 HA-SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS--IRNKVTWNVMILAHCLH 329
Query: 351 GMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRH 410
G +E FE M LRP+ V F+ VL C+ GLV +G +++ MV++ QI P+ H
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 411 YGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGACSVHNNVEIGQRVTEKIL 468
C+ ++ AG EEAE+ +P E W LL + N +G+ + + ++
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLI 449
Query: 469 EIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
E + + Y L+ NI+ GR++D R+RE++ ER +IPG L+
Sbjct: 450 ETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 232/435 (53%), Gaps = 15/435 (3%)
Query: 79 TSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTF 138
+ GLF ++ ++L+N++I Y + +A+ N + D+ T
Sbjct: 272 SRGLFDRK---SNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-------DSRTL 321
Query: 139 AFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPH 198
A + AC G Q+H K G + V + LL MYS G +EA ++F E+
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 199 RSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKM 258
T+ N I G ++ A VF+R+ ++S++SW + + +++ ++ L F +M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 259 VEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCG 318
++D + EV+L ++ A A++ ++L + V A G + D ++++LIDLY KCG
Sbjct: 442 HKLD-LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS-DQVVSSSLIDLYCKCG 499
Query: 319 CIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSV 378
+E R F + + + V WNS+ISG+A NG EA++ F+ M AG+RP + F+ V
Sbjct: 500 FVEHGRRVFDTMV--KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVV 557
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEV 438
L+AC++ GLVEEG K F M D VPD H+ C+VD+L RAG +EEA + ++P +V
Sbjct: 558 LTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDV 617
Query: 439 ANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLR 498
+ +W ++L C + +G++ EKI+E+E + YV +S IF G ++ + +R
Sbjct: 618 -DGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVR 676
Query: 499 EVIDERIAIKIPGYS 513
+++ E K PG S
Sbjct: 677 KLMRENNVTKNPGSS 691
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 176/390 (45%), Gaps = 52/390 (13%)
Query: 94 LLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRF 153
++ N+++ Y L+ + +A+ LN S+ D T + +ACA +
Sbjct: 155 VVTLNSLLHGYILNGYAEEALRL-FKELNFSA--------DAITLTTVLKACAELEALKC 205
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G Q+HA + G + + + L+ +Y+ G L A+ + +++ + + I+G
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
G V + +FDR +R V+ W +I Y N M+AL LF +M + TL
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM--RNETREDSRTLAA 323
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
+ A LG+++ + +H +A K G + DI + + L+D+Y+KCG A + F E+ +
Sbjct: 324 VINACIGLGFLETGKQMHCHACKFGL-IDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 334 -----------------------------RKNLVSWNSLISGFAMNGMAREAVENFENME 364
K+L+SWNS+ +GF+ NG E +E F M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 365 KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM----VNDCQIVPDIRHYGCVVDMLGR 420
K L + V+ SV+SAC+ +E G + F + ++ Q+V ++D+ +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS-----SSLIDLYCK 497
Query: 421 AGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
G +E +V + +++V W +++
Sbjct: 498 CGFVEHGRRVFDTMVK--SDEVPWNSMISG 525
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 171/404 (42%), Gaps = 67/404 (16%)
Query: 124 SSTFFTYSSLDTFTFAF-LSQACAYSNCTRFGIQLHALVFKVGFQFH-VYVQTGLLQMYS 181
SS+F +D + L Q+C+ N Q + L+ K GF V V LLQMYS
Sbjct: 14 SSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYS 73
Query: 182 IGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDA 241
G + A +FDEMP R+ +WN I G + GE +L FD M +R SW +V+
Sbjct: 74 RSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSG 133
Query: 242 YTRMNQPMKALALFRKMVEVD---------------------------GIEPTEVTLLTI 274
+ + + A LF M E D +TL T+
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTV 193
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PD 332
A A L +K + +H G D ++ ++L+++YAKCG + AS ++I PD
Sbjct: 194 LKACAELEALKCGKQIHAQILIGGVEC-DSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 333 ------------------------WRKN---LVSWNSLISGFAMNGMAREAVENFENMEK 365
RK+ ++ WNS+ISG+ N M EA+ F M
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN 312
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ--IVPDIRHYGCVVDMLGRAGR 423
R + +V++AC G +E G + + C+ ++ DI ++DM + G
Sbjct: 313 E-TREDSRTLAAVINACIGLGFLETGKQMH---CHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKI 467
EA K+ +V E + ++ +++ ++ +RV E+I
Sbjct: 369 PMEACKLFSEV--ESYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 196/343 (57%), Gaps = 6/343 (1%)
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR-DRSV 232
++ Y G L +A+ F P R V W I G +K +VELA ++F M ++++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 233 VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHG 292
V+W +I Y ++P L LFR M+E +GI P L + + L ++L + +H
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 293 YAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGM 352
K D+ +LI +Y KCG + A + F+ + +K++V+WN++ISG+A +G
Sbjct: 309 IVSKSTL-CNDVTALTSLISMYCKCGELGDAWKLFEVMK--KKDVVAWNAMISGYAQHGN 365
Query: 353 AREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYG 412
A +A+ F M +RP+ + F++VL AC+H GLV G+ +F MV D ++ P HY
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 413 CVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK 472
C+VD+LGRAG+LEEA K+ +P + ++ TLLGAC VH NVE+ + EK+L++
Sbjct: 426 CMVDLLGRAGKLEEALKLIRSMPFR-PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 473 GHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ YV ++NI+ R++D R+R+ + E +K+PGYS +
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 186 LVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRM 245
++EA Q+FDE+P T ++N+ ++ V+ E A S FDRM + SW +I Y R
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
+ KA LF M +E EV+ + G ++ A RG +
Sbjct: 169 GEMEKARELFYSM-----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG-----VV 218
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK 365
A+I Y K +E A F+++ KNLV+WN++ISG+ N + ++ F M +
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTV-NKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
G+RPN S L CS ++ G + +++V+ + D+ ++ M + G L
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 426 EAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+A K+ +V + + V W ++ + H N +
Sbjct: 337 DAWKL-FEVMKK-KDVVAWNAMISGYAQHGNAD 367
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 144 ACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
C+ + + G Q+H +V K V T L+ MY G L +A ++F+ M + V
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMV 259
WN I+G + G + AL +F M D + +++ V+ A +A F MV
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 260 EVDGIEP 266
+EP
Sbjct: 413 RDYKVEP 419
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 179/312 (57%), Gaps = 6/312 (1%)
Query: 205 NVFINGLVKWGEVELALSVFDRM--RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
N I+ K +V+ A ++FD + ++R VV+WT++I Y++ KAL L +M E D
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 263 -GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
P T+ A A+L +++ + +H YA + N + + ++N LID+YAKCG I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A F + KN V+W SL++G+ M+G EA+ F+ M + G + + V L VL A
Sbjct: 531 DARLVFDNM--MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
CSH G++++G+++FN+M + P HY C+VD+LGRAGRL A ++ ++P E
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME-PPP 647
Query: 442 VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
V+W L C +H VE+G+ EKI E+ H G Y L+SN++ GR+KD R+R ++
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 502 DERIAIKIPGYS 513
+ K PG S
Sbjct: 708 RHKGVKKRPGCS 719
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 21/340 (6%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + CA G QLH +++V L+ MY+ G++ EA VF
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPM 249
M + V+WN + G + G E A+ +F++M++ VV+W+ I Y +
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR---- 305
+AL + R+M+ GI+P EVTL+++ A++G + + +H YA K ID+R
Sbjct: 348 EALGVCRQMLS-SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY---PIDLRKNGH 403
Query: 306 -----ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENF 360
+ N LID+YAKC +++A F + +++V+W +I G++ +G A +A+E
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 361 ENM--EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
M E RPN L AC+ + G + + + Q + C++DM
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 419 GRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+ G + +A V + N+V W +L+ +H E
Sbjct: 524 AKCGSISDARLVFDNM--MAKNEVTWTSLMTGYGMHGYGE 561
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 197/446 (44%), Gaps = 88/446 (19%)
Query: 71 HQVHSHITTSGLFH-----HPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSS 125
H + ++I+ L H F + + +N++IR Y + ++ ++ + L HS
Sbjct: 64 HLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLY--LFGLMHSL 121
Query: 126 TFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGL 185
++ + D +TF F+ +AC + R G HAL GF +V+V L+ MYS
Sbjct: 122 SW----TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 186 LVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRM 245
L +A +VFDEM SV+D VVSW +I++Y ++
Sbjct: 178 LSDARKVFDEM-------------------------SVWD------VVSWNSIIESYAKL 206
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
+P AL +F +M G P +TL+ + P A+LG L + +H +A + ++
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNMF 265
Query: 306 ITNALIDLYAKCGCIESASRFF-----QEIPDW--------------------------- 333
+ N L+D+YAKCG ++ A+ F +++ W
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 334 -RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
+ ++V+W++ ISG+A G+ EA+ M +G++PN V +SVLS C+ G + G
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 393 KFFNKMVNDCQIVPDIRHYG---------CVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
+ + + D+R G ++DM + +++ A + + + + V
Sbjct: 386 EIHCYAI---KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILE 469
W ++G S H + + ++ E
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFE 468
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFK-VGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+ FT + ACA R G Q+HA + ++V L+ MY+ G + +A V
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQP 248
FD M ++ VTW + G G E AL +FD MR V+ +V+ A +
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 249 MKALALFRKMVEVDGIEP 266
+ + F +M V G+ P
Sbjct: 596 DQGMEYFNRMKTVFGVSP 613
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 227/436 (52%), Gaps = 46/436 (10%)
Query: 78 TTSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFT 137
+ S +H P+ N + +N II +S S F ++I + S D FT
Sbjct: 86 SLSVFWHMPYRN----IFSWNIIIGEFSRSGFASKSIDLFLRMWRESCV-----RPDDFT 136
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+ +AC+ S + G +H L K+GF ++V + L+ MY G L+ A ++FD+MP
Sbjct: 137 LPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMP 196
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
R + V +T + Y + + M LA+FR+
Sbjct: 197 VRDS-------------------------------VLYTAMFGGYVQQGEAMLGLAMFRE 225
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
M G V ++++ A LG +K +SVHG+ +R + + + + NA+ D+Y KC
Sbjct: 226 M-GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC-SCLGLNLGNAITDMYVKC 283
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
++ A F + R++++SW+SLI G+ ++G + + F+ M K G+ PN V FL
Sbjct: 284 SILDYAHTVFVNMS--RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLG 341
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
VLSAC+HGGLVE+ +F +++ + IVP+++HY V D + RAG LEEAEK +P +
Sbjct: 342 VLSACAHGGLVEKSWLYF-RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVK 400
Query: 438 VANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERL 497
++ + +L C V+ NVE+G+RV ++++++ YV ++ ++ GR+ +AE L
Sbjct: 401 -PDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESL 459
Query: 498 REVIDERIAIKIPGYS 513
R+ + E+ K+PG S
Sbjct: 460 RQWMKEKQISKVPGCS 475
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 207/381 (54%), Gaps = 18/381 (4%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FTF + +AC +G+++H+ + K G + V L+ MYS G++ EA ++
Sbjct: 482 DEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
R+ V+ G +E + ++ VSW +I Y Q A
Sbjct: 541 SRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF +M+E+ GI P + T T+ ANL L + +H K+ D+ I + L+D+
Sbjct: 590 LFTRMMEM-GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS-DVYICSTLVDM 647
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+KCG + + F++ R++ V+WN++I G+A +G EA++ FE M ++PNHV
Sbjct: 648 YSKCGDLHDSRLMFEK--SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 705
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F+S+L AC+H GL+++GL++F M D + P + HY +VD+LG++G+++ A ++ +
Sbjct: 706 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE 765
Query: 434 VPHEVANDVIWRTLLGACSVH-NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+P E A+DVIWRTLLG C++H NNVE+ + T +L ++ Y L+SN++ G ++
Sbjct: 766 MPFE-ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 493 DAERLREVIDERIAIKIPGYS 513
LR + K PG S
Sbjct: 825 KVSDLRRNMRGFKLKKEPGCS 845
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 131/253 (51%), Gaps = 4/253 (1%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
+S+ T F+F+ + CA G Q HA + GF+ +V LLQ+Y+ V A+
Sbjct: 44 NSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
VFD+MP R V+WN ING K ++ A S F+ M R VVSW ++ Y + + +K
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
++ +F M +GIE T I + L L +HG + G + D+ +AL
Sbjct: 164 SIEVFVDMGR-EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT-DVVAASAL 221
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D+YAK + R FQ IP+ KN VSW+++I+G N + A++ F+ M+K
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 371 NHVAFLSVLSACS 383
+ + SVL +C+
Sbjct: 280 SQSIYASVLRSCA 292
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 39/294 (13%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+A + ++CA + R G QLHA K F V+T L MY+ + +A +FD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
+ + ++N I G Y++ KAL LF +
Sbjct: 344 NLNRQSYNAMITG-------------------------------YSQEEHGFKALLLFHR 372
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
++ G+ E++L +F A A + + ++G A K + +D+ + NA ID+Y KC
Sbjct: 373 LMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS-LDVCVANAAIDMYGKC 430
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
+ A R F E+ R++ VSWN++I+ NG E + F +M ++ + P+ F S
Sbjct: 431 QALAEAFRVFDEMR--RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC-VVDMLGRAGRLEEAEKV 430
+L AC+ GG + G++ + +V + GC ++DM + G +EEAEK+
Sbjct: 489 ILKACT-GGSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 38/318 (11%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D TFA + + C++ T G+Q+H +V +VG V + LL MY+ G VE+ +V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F +P +++V SW+ +I + N AL
Sbjct: 238 FQGIPEKNSV-------------------------------SWSAIIAGCVQNNLLSLAL 266
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
F++M +V+ ++ ++ + A L ++L +H +A K F I + A +D
Sbjct: 267 KFFKEMQKVNA-GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLD 324
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAKC ++ A F + + S+N++I+G++ +A+ F + +GL +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
++ V AC+ + EGL+ + + + D+ +DM G+ L EA +V
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 433 QVPHEVANDVIWRTLLGA 450
++ A V W ++ A
Sbjct: 442 EMRRRDA--VSWNAIIAA 457
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 242/477 (50%), Gaps = 81/477 (16%)
Query: 70 VHQVHSHITTSGLFHHP--------------FHNTSTSLLLF------------NNIIRC 103
+ ++HSH+ +GL HHP + S + LLF N +IR
Sbjct: 21 LRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRG 80
Query: 104 YSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFK 163
+S S P +I F L + S D FTF F ++C +++H V +
Sbjct: 81 FSNSSSPLNSILFYNRML-----LSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 164 VGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSV 223
GF V T L++ YS G VE+A V
Sbjct: 136 SGFLDDAIVATSLVRCYSANG-------------------------------SVEIASKV 164
Query: 224 FDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY 283
FD M R +VSW ++I ++ + +AL+++++M +G+ TL+ + + A++
Sbjct: 165 FDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN-EGVCGDSYTLVALLSSCAHVSA 223
Query: 284 IKLCQSVHGYAEKRGFNVIDIR------ITNALIDLYAKCGCIESASRFFQEIPDWRKNL 337
+ + +H A DIR ++NALID+YAKCG +E+A F + ++++
Sbjct: 224 LNMGVMLHRIA-------CDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR--KRDV 274
Query: 338 VSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNK 397
++WNS+I G+ ++G EA+ F M +G+RPN + FL +L CSH GLV+EG++ F
Sbjct: 275 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI 334
Query: 398 MVNDCQIVPDIRHYGCVVDMLGRAGRLEEA-EKVALQVPHEVANDVIWRTLLGACSVHNN 456
M + + P+++HYGC+VD+ GRAG+LE + E + HE + V+WRTLLG+C +H N
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE--DPVLWRTLLGSCKIHRN 392
Query: 457 VEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+E+G+ +K++++E + GDYVLM++I+ + +R++I +PG+S
Sbjct: 393 LELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWS 449
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 198/364 (54%), Gaps = 40/364 (10%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
+T + AC+ G QLH+ + K+GF+ H++ T L+ MY+ G L +A + FD
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD- 381
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+++R V WT +I Y + + +AL L+
Sbjct: 382 ------------------------------CLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
R+M + GI P + T+ ++ A ++L ++L + VHG+ K GF +++ I +AL +Y+
Sbjct: 412 RRM-KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFG-LEVPIGSALSTMYS 469
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
KCG +E + F+ P+ K++VSWN++ISG + NG EA+E FE M G+ P+ V F
Sbjct: 470 KCGSLEDGNLVFRRTPN--KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQ 433
++++SACSH G VE G +FN M + + P + HY C+VD+L RAG+L+EA++ +
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+ H + +WR LL AC H E+G EK++ + YV +S I+ +GR +D
Sbjct: 588 IDHGLC---LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 494 AERL 497
ER+
Sbjct: 645 VERV 648
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 46/302 (15%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +T A + +A + + G Q HALV K+ +YV T L+ MY GL
Sbjct: 117 NAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL-------- 168
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT---RMNQPMK 250
VE L VF M +R+ +W+ ++ Y R+ + +K
Sbjct: 169 -----------------------VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
LF + E + ++ + ++A Y+ L + +H K G + + ++NAL
Sbjct: 206 VFNLFLR--EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNAL 262
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+ +Y+KC + A + F D +N ++W+++++G++ NG + EAV+ F M AG++P
Sbjct: 263 VTMYSKCESLNEACKMFDSSGD--RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY---GCVVDMLGRAGRLEEA 427
+ + VL+ACS +EEG + + ++ + RH +VDM +AG L +A
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLK----LGFERHLFATTALVDMYAKAGCLADA 376
Query: 428 EK 429
K
Sbjct: 377 RK 378
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTR---MNQPMKALALFRKMVEV 261
NV +N K G++ A S+F+ + + VVSW +I Y++ ++ + LFR+M
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
D I P TL IF A ++L + + H K + DI + +L+ +Y K G +E
Sbjct: 113 D-ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS-SFGDIYVDTSLVGMYCKAGLVE 170
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFE---NMEKAGLRPNHV--AFL 376
+ F +P+ +N +W++++SG+A G EA++ F ++ G ++V A L
Sbjct: 171 DGLKVFAYMPE--RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
Query: 377 SVLSACSHGGL 387
S L+A + GL
Sbjct: 229 SSLAATIYVGL 239
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
++VHG + G + I+ N L++ YAKCG + A F I K++VSWNSLI+G+
Sbjct: 34 RAVHGQIIRTGASTC-IQHANVLVNFYAKCGKLAKAHSIFNAII--CKDVVSWNSLITGY 90
Query: 348 AMNG---MAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI 404
+ NG + ++ F M + PN + A S G + + +V
Sbjct: 91 SQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG-RQAHALVVKMSS 149
Query: 405 VPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVT 464
DI +V M +AG +E+ KV +P N W T++ + VE +V
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER--NTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 465 EKIL-EIEKGHGGDYV-------LMSNIFVGVGR 490
L E E+G DYV L + I+VG+GR
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 211/382 (55%), Gaps = 38/382 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTFA + +C ++ G Q+H L+ K + H++V + LL MY+ G + EA ++F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ +P +R VVS T +I Y ++ +AL
Sbjct: 212 ECLP-------------------------------ERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+F ++ +G+ P VT ++ A++ L + + H + +R + + N+LID+
Sbjct: 241 MFHRL-HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDM 298
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRPNH 372
Y+KCG + A R F +P+ + +SWN+++ G++ +G+ RE +E F M ++ ++P+
Sbjct: 299 YSKCGNLSYARRLFDNMPE--RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMV-NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
V L+VLS CSHG + + GL F+ MV + P HYGC+VDMLGRAGR++EA +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
++P + V+ +LLGAC VH +V+IG+ V +++EIE + G+YV++SN++ GR+
Sbjct: 417 KRMPSKPTAGVLG-SLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 492 KDAERLREVIDERIAIKIPGYS 513
D +R ++ ++ K PG S
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRS 497
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 67/371 (18%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+ L AC R G ++HA + K + Y++T LL Y L +A +V DEMP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
+++VVSWT +I Y++ +AL +F +
Sbjct: 115 -------------------------------EKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
M+ DG +P E T T+ + + L + +HG K ++ I + ++L+D+YAK
Sbjct: 144 MMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS-HIFVGSSLLDMYAKA 201
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G I+ A F+ +P+ +++VS ++I+G+A G+ EA+E F + G+ PN+V + S
Sbjct: 202 GQIKEAREIFECLPE--RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYAS 259
Query: 378 VLSACSHGGLVEEG-----------LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
+L+A S L++ G L F+ + N ++DM + G L
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS------------LIDMYSKCGNLSY 307
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTE--KILEIEKGHGGDYVLMSNI 484
A ++ +P A + W +L S H +G+ V E +++ EK D V + +
Sbjct: 308 ARRLFDNMPERTA--ISWNAMLVGYSKHG---LGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 485 FVGV--GRYKD 493
G GR +D
Sbjct: 363 LSGCSHGRMED 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 91/248 (36%), Gaps = 68/248 (27%)
Query: 100 IIRCYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTF--TFAFLSQACAYSNCTRFGI 155
II Y+ +A+ +H+ S + TY+SL T A L G
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH----------GK 274
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
Q H V + F+ +Q L+ MYS G L A ++FD MP R+ ++WN + G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG----- 329
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
Y++ + L LFR M + ++P VTLL +
Sbjct: 330 --------------------------YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT------------NALIDLYAKCGCIESA 323
+ HG E G N+ D + ++D+ + G I+ A
Sbjct: 364 SGCS-----------HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 324 SRFFQEIP 331
F + +P
Sbjct: 413 FEFIKRMP 420
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 197/360 (54%), Gaps = 37/360 (10%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
+A A + G Q+HA V K GFQ ++ V +L +Y G L EA F EM
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM------ 274
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
D+ +++W +I R + +AL +F++ E
Sbjct: 275 -------------------------EDKDLITWNTLISELERSDSS-EALLMFQRF-ESQ 307
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
G P T ++ A AN+ + Q +HG +RGFN ++ + NALID+YAKCG I
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK-NVELANALIDMYAKCGNIPD 366
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
+ R F EI D R+NLVSW S++ G+ +G EAVE F+ M +G+RP+ + F++VLSAC
Sbjct: 367 SQRVFGEIVD-RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
H GLVE+GLK+FN M ++ I PD Y CVVD+LGRAG++ EA ++ ++P + ++
Sbjct: 426 RHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK-PDES 484
Query: 443 IWRTLLGACSVHN-NVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
W +LGAC H N I + K++E++ G YV++S I+ G++ D R+R+++
Sbjct: 485 TWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMM 544
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 39/280 (13%)
Query: 187 VEAAQVFDEMPHRSTVTWNVFINGLVKW---GEVELALSVFDRMRDRSVVSWTLVIDAYT 243
VE++Q + P++ + N +V + G VE A S+FD M DR VV+WT +I Y
Sbjct: 28 VESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYA 87
Query: 244 RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID 303
N +A F +MV+ G P E TL ++ + N+ + VHG K G
Sbjct: 88 SSNYNARAWECFHEMVK-QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEG-S 145
Query: 304 IRITNALIDLYAKCG-CIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
+ + NA++++YA C +E+A F++I KN V+W +LI+GF G ++ ++
Sbjct: 146 LYVDNAMMNMYATCSVTMEAACLIFRDIK--VKNDVTWTTLITGFTHLGDGIGGLKMYKQ 203
Query: 363 M--EKAGLRPNHVAFLSVLSACS----------HGGLVEEGLKFFNKMVNDCQIVPDIRH 410
M E A + P + ++V ++ S H +++ G + ++N
Sbjct: 204 MLLENAEVTP-YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNS--------- 253
Query: 411 YGCVVDMLGRAGRLEEAEKVALQVPHEVAND--VIWRTLL 448
++D+ R G L EA+ HE+ + + W TL+
Sbjct: 254 ---ILDLYCRCGYLSEAK----HYFHEMEDKDLITWNTLI 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +TF L ACA G QLH +F+ GF +V + L+ MY+ G + ++ +VF
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
E+ R R++VSWT ++ Y +A+
Sbjct: 372 GEIVDR------------------------------RNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKR-GFNVIDIRITNALID 312
LF KMV GI P + + + A + G ++ E G N D I N ++D
Sbjct: 402 LFDKMVS-SGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINP-DRDIYNCVVD 459
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLI 344
L + G I A + +P ++ + +W +++
Sbjct: 460 LLGRAGKIGEAYELVERMP-FKPDESTWGAIL 490
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 229/459 (49%), Gaps = 66/459 (14%)
Query: 75 SHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLD 134
+H+ F HP LFN +++C P +I + + SS + L+
Sbjct: 62 AHLLVFPRFGHP------DKFLFNTLLKCSK----PEDSIRIFANYASKSSLLY----LN 107
Query: 135 TFTFAFL---SQACAYSNCTRFGIQLHALVFKVGFQFHV-YVQTGLLQMYSIGGLLVEAA 190
TF F+ A S+ R G +H +V K+GF + + T LL Y+
Sbjct: 108 ERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYA--------- 158
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQP-- 248
K G++ A VFD M +R+ V+W +I Y
Sbjct: 159 ----------------------KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGN 196
Query: 249 ---MKALALFRKMVEV-DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-ID 303
KA+ LFR+ G+ PT+ T++ + AI+ G +++ VHGY EK GF +D
Sbjct: 197 HNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVD 256
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
+ I AL+D+Y+KCGC+ +A F+ + KN+ +W S+ +G A+NG E M
Sbjct: 257 VFIGTALVDMYSKCGCLNNAFSVFELMK--VKNVFTWTSMATGLALNGRGNETPNLLNRM 314
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
++G++PN + F S+LSA H GLVEEG++ F M + P I HYGC+VD+LG+AGR
Sbjct: 315 AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGR 374
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK-------GHGG 476
++EA + L +P + + ++ R+L ACS++ +G+ + + +LEIE+
Sbjct: 375 IQEAYQFILAMPIK-PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECE 433
Query: 477 DYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
DYV +SN+ G++ + E+LR+ + ER PGYS +
Sbjct: 434 DYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 198/365 (54%), Gaps = 41/365 (11%)
Query: 152 RFGIQLHALVFKVG-FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
RFG +H L + G + V++ + L+ MY +A +VFDEMP
Sbjct: 221 RFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP------------- 267
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
R+VV+WT +I Y + K + +F +M++ D + P E T
Sbjct: 268 ------------------SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD-VAPNEKT 308
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT--NALIDLYAKCGCIESASRFFQ 328
L ++ A A++G + + VH Y K N I+I T LIDLY KCGC+E A F+
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIK---NSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 329 EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
+ + KN+ +W ++I+GFA +G AR+A + F M + + PN V F++VLSAC+HGGLV
Sbjct: 366 RLHE--KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
EEG + F M + P HY C+VD+ GR G LEEA+ + ++P E N V+W L
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTN-VVWGALF 482
Query: 449 GACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIK 508
G+C +H + E+G+ ++++++ H G Y L++N++ + + R+R+ + ++ +K
Sbjct: 483 GSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVK 542
Query: 509 IPGYS 513
PG+S
Sbjct: 543 SPGFS 547
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 6/251 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N I+G G + A +FD D+ VV+WT +ID + R +A+ F +M + G+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT-GV 200
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
E+T++++ A + ++ +SVHG + G D+ I ++L+D+Y KC C + A
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+ F E+P +N+V+W +LI+G+ + + + FE M K+ + PN SVLSAC+H
Sbjct: 261 KVFDEMPS--RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
G + G + M+ + I + ++D+ + G LEEA V + HE N W
Sbjct: 319 VGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILV-FERLHE-KNVYTW 375
Query: 445 RTLLGACSVHN 455
++ + H
Sbjct: 376 TAMINGFAAHG 386
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 11/242 (4%)
Query: 231 SVVSWTLVIDAYT---RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
S+ W +I ++ +N+ + LA +R M +G+ P+ T + A+ L
Sbjct: 66 SIQLWDSLIGHFSGGITLNRRLSFLA-YRHMRR-NGVIPSRHTFPPLLKAVFKLRDSNPF 123
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
Q H + K G + D + N+LI Y+ G + ASR F D K++V+W ++I GF
Sbjct: 124 Q-FHAHIVKFGLDS-DPFVRNSLISGYSSSGLFDFASRLFDGAED--KDVVTWTAMIDGF 179
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
NG A EA+ F M+K G+ N + +SVL A V G + ++ D
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKI 467
+ +VDM G+ ++A+KV ++P N V W L+ + G V E++
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSR--NVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 468 LE 469
L+
Sbjct: 298 LK 299
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 200/342 (58%), Gaps = 12/342 (3%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIH-FSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
S S +N +IR S++ P +A+ F + ++H S F D FTF F+ +AC S+
Sbjct: 80 SPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF------DKFTFPFVIKACLASS 133
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
R G Q+H L K GF V+ Q L+ +Y G +VFD+MP RS V+W +
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
GLV +++ A VF++M R+VVSWT +I AY + +P +A LFR+M +VD ++P E
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPNEF 252
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
T++ + A LG + + + VH YA K GF V+D + ALID+Y+KCG ++ A + F
Sbjct: 253 TIVNLLQASTQLGSLSMGRWVHDYAHKNGF-VLDCFLGTALIDMYSKCGSLQDARKVFDV 311
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENF-ENMEKAGLRPNHVAFLSVLSACSHGGLV 388
+ K+L +WNS+I+ ++G EA+ F E E+A + P+ + F+ VLSAC++ G V
Sbjct: 312 MQG--KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
++GL++F +M+ I P H C++ +L +A +E+A +
Sbjct: 370 KDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNL 411
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
+GE + A VF++++ S +W L+I + + ++P +AL LF M+ + + T
Sbjct: 65 FGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPF 124
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP-- 331
+ A I+L VHG A K GF D+ N L+DLY KCG +S + F ++P
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR 183
Query: 332 ---DWR------------------------KNLVSWNSLISGFAMNGMAREAVENFENME 364
W +N+VSW ++I+ + N EA + F M+
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Query: 365 KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRL 424
++PN +++L A + G + G ++ + + V D ++DM + G L
Sbjct: 244 VDDVKPNEFTIVNLLQASTQLGSLSMG-RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Query: 425 EEAEKV 430
++A KV
Sbjct: 303 QDARKV 308
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 203/380 (53%), Gaps = 36/380 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FT + + CA C+ G QLH LV KVGF +YV L+ +Y+
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYA------------ 394
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K +++ A+ +F + ++ VSW VI Y + + KA +
Sbjct: 395 -------------------KCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+FR+ + + + TEVT + A A+L + L VHG A K N + ++N+LID+
Sbjct: 436 MFREALR-NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN-NAKKVAVSNSLIDM 493
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAKCG I+ A F E+ ++ SWN+LISG++ +G+ R+A+ + M+ +PN +
Sbjct: 494 YAKCGDIKFAQSVFNEME--TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL 551
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
FL VLS CS+ GL+++G + F M+ D I P + HY C+V +LGR+G+L++A K+
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P+E + +IWR +L A NN E +R E+IL+I YVL+SN++ G ++ +
Sbjct: 612 IPYE-PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 494 AERLREVIDERIAIKIPGYS 513
+R+ + E K PG S
Sbjct: 671 VASIRKSMKEMGVKKEPGLS 690
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 44/295 (14%)
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
LH+ + K+G+ + +V L+ YS+ G + A VF+ + + V W ++ V+ G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
E +L + MR + G P T T
Sbjct: 228 FEDSLKLLSCMR--------------------------------MAGFMPNNYTFDTALK 255
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
A LG + VHG K + V+D R+ L+ LY + G + A + F E+P + +
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCY-VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP--KND 312
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG---GLVEEGLK 393
+V W+ +I+ F NG EAV+ F M +A + PN S+L+ C+ G GL E+
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ--- 369
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
+ +V DI ++D+ + +++ A K+ ++ + N+V W T++
Sbjct: 370 -LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK--NEVSWNTVI 421
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 12/239 (5%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N+ +N VK G + AL++FD M +R+ VS+ + Y + + L+ ++ +G
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRL-HREGH 142
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
E + +L ++C +H K G++ + + ALI+ Y+ CG ++SA
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS-NAFVGAALINAYSVCGSVDSAR 201
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F+ I K++V W ++S + NG ++++ M AG PN+ F + L A
Sbjct: 202 TVFEGI--LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
G + +++ C ++ D R ++ + + G + +A KV ++P NDV+
Sbjct: 260 LGAFDFAKGVHGQILKTCYVL-DPRVGVGLLQLYTQLGDMSDAFKVFNEMPK---NDVV 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S+ TF+ ACA G+Q+H L K V V L+ MY+ G + A
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQ 247
VF+EM +WN I+G G AL + D M+DR +++ V+ +
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGL 565
Query: 248 PMKALALFRKMVEVDGIEP 266
+ F M+ GIEP
Sbjct: 566 IDQGQECFESMIRDHGIEP 584
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 200/380 (52%), Gaps = 38/380 (10%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +T+A + +C G +H L+ K GF+ + QT LL MY L+ ++ +VF
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ + + V+W I+GLV+ G E+ AL
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEM-------------------------------ALI 354
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
FRKM+ D I+P TL + +NL + + +HG K GF+ D + LIDL
Sbjct: 355 EFRKMMR-DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR-DKYAGSGLIDL 412
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCGC + A F + + +++S N++I +A NG REA++ FE M GL+PN V
Sbjct: 413 YGKCGCSDMARLVFDTLSEV--DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDV 470
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
LSVL AC++ LVEEG + F+ D +I+ HY C+VD+LGRAGRLEEAE + +
Sbjct: 471 TVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTE 529
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
V + + V+WRTLL AC VH VE+ +R+T KILEIE G G +LMSN++ G++
Sbjct: 530 VIN--PDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNR 587
Query: 494 AERLREVIDERIAIKIPGYS 513
++ + + K P S
Sbjct: 588 VIEMKSKMKDMKLKKNPAMS 607
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 22/234 (9%)
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV 259
+ ++ + ++ +K G+++ A VFD M +R +V+W +I + + +A+ ++R M+
Sbjct: 98 AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI 157
Query: 260 EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC 319
+ + P E TL ++F A ++L K Q HG A G V ++ + +AL+D+Y K G
Sbjct: 158 -TNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 320 IESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVL 379
A + + K++V +LI G++ G EAV+ F++M ++PN + SVL
Sbjct: 217 TREAKLVLDRVEE--KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 380 SACS-----------HGGLVEEGLK-------FFNKMVNDCQIVPD-IRHYGCV 414
+C HG +V+ G + M C +V D +R + C+
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 220/471 (46%), Gaps = 78/471 (16%)
Query: 116 FSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR--FGIQLHALVFKVGFQFHVYVQ 173
F L+H ++ + F S A S+ R +G Q+H L K +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFI-----NG------------------ 210
L MY+ G L A +VFD++ T +WNV I NG
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 211 ----------------------------LVKWG-------------------EVELALSV 223
++KWG ++ ++
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 224 FDRMRDRS-VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
F+ R+ + VSW ++ A + QP++ L LF+ M+ V EP +T+ + +
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLML-VSECEPDHITMGNLLRGCVEIS 487
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
+KL VH Y+ K G + I N LID+YAKCG + A R F + + +++VSW++
Sbjct: 488 SLKLGSQVHCYSLKTGL-APEQFIKNGLIDMYAKCGSLGQARRIFDSMDN--RDVVSWST 544
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
LI G+A +G EA+ F+ M+ AG+ PNHV F+ VL+ACSH GLVEEGLK + M +
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQR 462
I P H CVVD+L RAGRL EAE+ ++ E + V+W+TLL AC NV + Q+
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE-PDVVVWKTLLSACKTQGNVHLAQK 663
Query: 463 VTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
E IL+I+ + +VL+ ++ G +++A LR + + KIPG S
Sbjct: 664 AAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 155/358 (43%), Gaps = 46/358 (12%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D F F + +ACA S+ G QLHA V K+ H+ Q L+ MY + +A++VF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+P M+D ++SW+ +I ++++ +AL+
Sbjct: 227 YGIP-----------------------------MKD--LISWSSIIAGFSQLGFEFEALS 255
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF--NVIDIRITNALI 311
++M+ P E + A ++L +HG K N I +L
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI---AGCSLC 312
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
D+YA+CG + SA R F +I R + SWN +I+G A NG A EAV F M +G P+
Sbjct: 313 DMYARCGFLNSARRVFDQIE--RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
++ S+L A + + +G++ + ++ + D+ ++ M L +
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNL- 428
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKIL--EIEKGHGGDYVLMSNIFVG 487
+ A+ V W T+L AC H R+ + +L E E D++ M N+ G
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP----DHITMGNLLRG 482
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 22/258 (8%)
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
T+ N ++ K G + A VFD M +R++VS+T VI Y++ Q +A+ L+ KM++
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
D + P + +I A A+ + L + +H K + + NALI +Y + +
Sbjct: 162 EDLV-PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQNALIAMYVRFNQM 219
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL-RPNHVAFLSVL 379
ASR F IP K+L+SW+S+I+GF+ G EA+ + + M G+ PN F S L
Sbjct: 220 SDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 380 SACS------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGC-VVDMLGRAGRLEEAEKVAL 432
ACS +G + GL +++ + GC + DM R G L A +V
Sbjct: 278 KACSSLLRPDYGSQI-HGLCIKSELAGNAIA-------GCSLCDMYARCGFLNSARRVFD 329
Query: 433 QVPHEVANDVIWRTLLGA 450
Q+ E + W ++
Sbjct: 330 QI--ERPDTASWNVIIAG 345
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
D + N ++ +Y KCG + A F +P+ +NLVS+ S+I+G++ NG EA+ +
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
M + L P+ AF S++ AC+ V G K + V + + ++ M R
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLG-KQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACS 452
++ +A +V +P + + + W +++ S
Sbjct: 218 QMSDASRVFYGIP--MKDLISWSSIIAGFS 245
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 193/340 (56%), Gaps = 2/340 (0%)
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
++ Y+ + EA Q+F MP R +WN I G ++ E+ A +FDRM +++V+
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
SWT +I Y + +AL +F KM+ ++P T ++I A ++L + Q +H
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
K +I +T+AL+++Y+K G + +A + F +++L+SWNS+I+ +A +G
Sbjct: 357 ISKSVHQKNEI-VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
+EA+E + M K G +P+ V +L++L ACSH GLVE+G++FF +V D + HY C
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 414 VVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKG 473
+VD+ GRAGRL++ + + + +L AC+VHN V I + V +K+LE
Sbjct: 476 LVDLCGRAGRLKDVTNF-INCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSD 534
Query: 474 HGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
G YVLMSNI+ G+ ++A +R + E+ K PG S
Sbjct: 535 DAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCS 574
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 175/394 (44%), Gaps = 31/394 (7%)
Query: 69 AVHQVHSHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLS-----PFPHQAIH--FSIHTL 121
A+ ++ S+ S +F P + S+ LFN + YS S P P I + +
Sbjct: 5 ALSRLRSYYKRSSVF--PSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKI 62
Query: 122 NHSSTFFT-YSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMY 180
+ F D T+ + R + L +V + +V T ++ Y
Sbjct: 63 AEARKLFDGLPERDVVTWTHVITGYIKLGDMR---EARELFDRVDSRKNVVTWTAMVSGY 119
Query: 181 SIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVID 240
L A +F EMP R+ V+WN I+G + G ++ AL +FD M +R++VSW ++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 241 AYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN 300
A + + +A+ LF +M D + T + +A G + + + +R N
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWT-----AMVDGLAKNGKVDEARRLFDCMPER--N 232
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENF 360
+I NA+I YA+ I+ A + FQ +P+ ++ SWN++I+GF N +A F
Sbjct: 233 IISW---NAMITGYAQNNRIDEADQLFQVMPE--RDFASWNTMITGFIRNREMNKACGLF 287
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGR 420
+ M + N +++ ++++ EE L F+KM+ D + P++ Y ++
Sbjct: 288 DRMPE----KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 421 AGRLEEAEKVALQVPHEV--ANDVIWRTLLGACS 452
L E +++ + V N+++ LL S
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYS 377
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 219/424 (51%), Gaps = 52/424 (12%)
Query: 97 FNNIIRCYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+N II Y+ S A+ + T + FT SS+ L Y + + G
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV-------LPIFSEYVDVIK-G 261
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
++H V + G VY+ + L+ MY+ K
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYA-------------------------------KS 290
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
+E + VF R+ R +SW ++ Y + + +AL LFR+MV ++P V ++
Sbjct: 291 ARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-VKPGAVAFSSV 349
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
PA A+L + L + +HGY + GF +I I +AL+D+Y+KCG I++A + F R
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGS-NIFIASALVDMYSKCGNIKAARKIFD-----R 403
Query: 335 KNL---VSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
N+ VSW ++I G A++G EAV FE M++ G++PN VAF++VL+ACSH GLV+E
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
+FN M + ++ HY V D+LGRAG+LEEA ++ E V W TLL +C
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV-WSTLLSSC 522
Query: 452 SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPG 511
SVH N+E+ ++V EKI ++ + G YVLM N++ GR+K+ +LR + ++ K P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 512 YSLL 515
S +
Sbjct: 583 CSWI 586
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 182/370 (49%), Gaps = 20/370 (5%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
S +L + ++IRC F Q++ FS + + D F + ++C
Sbjct: 67 SPPVLAWKSVIRC-----FTDQSL-FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYS--IG-GLLVEAAQVFDEMPHRSTVTWNVF 207
RFG +H + ++G +Y L+ MY+ +G G + VFDEMP R++ + +
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 208 ING---LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+ ++ +G ++ VF+ M + VVS+ +I Y + AL + R+M D +
Sbjct: 181 VKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-L 238
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+P TL ++ P + + + +HGY ++G + D+ I ++L+D+YAK IE +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS-DVYIGSSLVDMYAKSARIEDSE 297
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
R F + + ++ +SWNSL++G+ NG EA+ F M A ++P VAF SV+ AC+H
Sbjct: 298 RVFSRL--YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
+ G K + V +I +VDM + G ++ A K+ ++ V ++V W
Sbjct: 356 LATLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM--NVLDEVSW 412
Query: 445 RTLLGACSVH 454
++ ++H
Sbjct: 413 TAIIMGHALH 422
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 41/243 (16%)
Query: 224 FDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY 283
F ++ V++W VI +T + KALA F +M G P ++ + +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMD 120
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC-------------------------- 317
++ +SVHG+ + G + D+ NAL+++YAK
Sbjct: 121 LRFGESVHGFIVRLGMDC-DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 318 -----GC-----IESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
C I+S R F+ +P RK++VS+N++I+G+A +GM +A+ M
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMP--RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
L+P+ SVL S V +G + ++ I D+ +VDM ++ R+E++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 428 EKV 430
E+V
Sbjct: 297 ERV 299
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 199/383 (51%), Gaps = 36/383 (9%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D + F + AC G Q+HA + + FQ H+YV + L+ MY
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY------------ 315
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
K + A +VFDRM+ ++VVSWT ++ Y + + +A+
Sbjct: 316 -------------------CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+F M + GI+P TL A AN+ ++ HG A G + + ++N+L+
Sbjct: 357 KIFLDM-QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVT 414
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
LY KCG I+ ++R F E+ ++ VSW +++S +A G A E ++ F+ M + GL+P+
Sbjct: 415 LYGKCGDIDDSTRLFNEMN--VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
V V+SACS GLVE+G ++F M ++ IVP I HY C++D+ R+GRLEEA +
Sbjct: 473 VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFIN 532
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+P + + W TLL AC N+EIG+ E ++E++ H Y L+S+I+ G++
Sbjct: 533 GMPFP-PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWD 591
Query: 493 DAERLREVIDERIAIKIPGYSLL 515
+LR + E+ K PG S +
Sbjct: 592 SVAQLRRGMREKNVKKEPGQSWI 614
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 206/441 (46%), Gaps = 56/441 (12%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQ 156
+N +I YSLS A+ + S T +L T LS + + G Q
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL--MTMLKLSSSNGH---VSLGKQ 160
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
+H V K+GF+ ++ V + LL MY+ G + +A +VF + R+TV +N + GL+ G
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+E AL +F M ++ VSW +I + +A+ FR+M +V G++ + ++ P
Sbjct: 221 IEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLP 278
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
A LG I + +H + F I + +ALID+Y KC C+ A F + +KN
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQ-DHIYVGSALIDMYCKCKCLHYAKTVFDRMK--QKN 335
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+VSW +++ G+ G A EAV+ F +M+++G+ P+H +SAC++ +EEG +F
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 397 KMVNDCQIVPDIRHY----GCVVDMLGRAGRLEEA------------------------- 427
K + I HY +V + G+ G ++++
Sbjct: 396 KAITSGLI-----HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 428 ----EKVAL---QVPHEVANDVIWRT-LLGACSVHNNVEIGQRVTEKILEIEKG---HGG 476
E + L V H + D + T ++ ACS VE GQR K++ E G G
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF-KLMTSEYGIVPSIG 509
Query: 477 DYVLMSNIFVGVGRYKDAERL 497
Y M ++F GR ++A R
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRF 530
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 177/424 (41%), Gaps = 70/424 (16%)
Query: 149 NCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFI 208
N +R+ +H + + ++ ++ Y++ A +VFD +P + +WN +
Sbjct: 20 NQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLL 79
Query: 209 NGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTE 268
K G + S F+++ DR V+W ++I+ Y+ A+ + M+ T
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 269 VTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
VTL+T+ ++ G++ L + +HG K GF + + + L+ +YA GCI A + F
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESY-LLVGSPLLYMYANVGCISDAKKVFY 198
Query: 329 EIPD----------------------------WRKNLVSWNSLISGFAMNGMAREAVENF 360
+ D K+ VSW ++I G A NG+A+EA+E F
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF-------------------------- 394
M+ GL+ + F SVL AC G + EG +
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 395 ----FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTL--- 447
+ K V D ++ + +V G+ GR EEA K+ L + D TL
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQA 377
Query: 448 LGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV----GRYKDAERLREVIDE 503
+ AC+ +++E G + K + H YV +SN V + G D+ RL ++
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIH---YVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 504 RIAI 507
R A+
Sbjct: 435 RDAV 438
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 38/382 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT+ F+ +A + G LHA V K GF V T L+ MY
Sbjct: 108 DEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMY------------- 154
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+K+GE+ A +F+ M+ + +V+W + + AL
Sbjct: 155 ------------------MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
F KM D ++ T++++ A LG +++ + ++ A K + +I + NA +D+
Sbjct: 197 YFNKMC-ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC-NIIVENARLDM 254
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
+ KCG E+A F+E+ ++N+VSW+++I G+AMNG +REA+ F M+ GLRPN+V
Sbjct: 255 HLKCGNTEAARVLFEEMK--QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYV 312
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMV--NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
FL VLSACSH GLV EG ++F+ MV ND + P HY C+VD+LGR+G LEEA +
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
++P E + IW LLGAC+VH ++ +GQ+V + ++E G +VL+SNI+ G++
Sbjct: 373 KKMPVE-PDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKW 431
Query: 492 KDAERLREVIDERIAIKIPGYS 513
+++R + + K+ YS
Sbjct: 432 DCVDKVRSKMRKLGTKKVAAYS 453
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
+ LV G++ A VFD M + W + Y R P ++L L++KM ++ G+ P
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL-GVRP 107
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
E T + AI+ LG ++H + K GF + I + L+ +Y K G + SA
Sbjct: 108 DEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI-VATELVMMYMKFGELSSAEFL 166
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F+ + K+LV+WN+ ++ G + A+E F M ++ + +S+LSAC G
Sbjct: 167 FESMQ--VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLG 224
Query: 387 LVEEGLKFFNKMVN---DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
+E G + +++ DC I+ + +DM + G E A + ++ N V
Sbjct: 225 SLEIGEEIYDRARKEEIDCNIIVE----NARLDMHLKCGNTEAARVLFEEMKQR--NVVS 278
Query: 444 WRTLL 448
W T++
Sbjct: 279 WSTMI 283
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 174/303 (57%), Gaps = 5/303 (1%)
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
K E+E A +FD ++S+ SW +I YT+ A++LFR+M + + P VT+
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTIT 424
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
I A A LG + L + VH F I ++ ALI +YAKCG I A R F +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFES-SIYVSTALIGMYAKCGSIAEARRLFDLMT- 482
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
+KN V+WN++ISG+ ++G +EA+ F M +G+ P V FL VL ACSH GLV+EG
Sbjct: 483 -KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ FN M++ P ++HY C+VD+LGRAG L+ A + + E + V W TLLGAC
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV-WETLLGACR 600
Query: 453 VHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGY 512
+H + + + V+EK+ E++ + G +VL+SNI Y A +R+ +R K PGY
Sbjct: 601 IHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY 660
Query: 513 SLL 515
+L+
Sbjct: 661 TLI 663
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 46/362 (12%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+L+N +I Y + ++I +N S T LDT T + A A R G
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCT-----RLDTTTLLDILPAVAELQELRLG 240
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
+Q+H+L K G H YV TG + +YS K
Sbjct: 241 MQIHSLATKTGCYSHDYVLTGFISLYS-------------------------------KC 269
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G++++ ++F R +V++ +I YT + +L+LF++++ + G TL+++
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSL 328
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
P G++ L ++HGY K F + ++ AL +Y+K IESA + F E P+
Sbjct: 329 VPVS---GHLMLIYAIHGYCLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDESPE-- 382
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
K+L SWN++ISG+ NG+ +A+ F M+K+ PN V +LSAC+ G + G K+
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KW 441
Query: 395 FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ +V I ++ M + G + EA ++ + + N+V W T++ +H
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK--NEVTWNTMISGYGLH 499
Query: 455 NN 456
Sbjct: 500 GQ 501
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 41/296 (13%)
Query: 94 LLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRF 153
+ LFN ++R +S++ PH ++ H L S+ SS T+AF A + R
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAH-LRKSTDLKPNSS----TYAFAISAASGFRDDRA 137
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G +H G + + + +++MY + +A +VFD MP + T+ WN I+G
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG--- 194
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
Y + ++++ +FR ++ TLL
Sbjct: 195 ----------------------------YRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
I PA+A L ++L +H A K G D +T I LY+KCG I+ S F+E +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT-GFISLYSKCGKIKMGSALFRE---F 282
Query: 334 RK-NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
RK ++V++N++I G+ NG ++ F+ + +G R +S++ H L+
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 51/293 (17%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
SL +N +I Y+ + AI S+ S F S + T + ACA
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAI--SLFREMQKSEF----SPNPVTITCILSACAQLGALS 437
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G +H LV F+ +YV T L+ MY+ G + EA ++FD M ++ VTWN I+G
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
G+ + AL++F Y +N GI PT VT L
Sbjct: 498 LHGQGQEALNIF-----------------YEMLNS---------------GITPTPVTFL 525
Query: 273 TIFPAIANLGYIKLCQSV-HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
+ A ++ G +K + + + GF ++ ++D+ + G ++ A +F + +
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEP-SVKHYACMVDILGRAGHLQRALQFIEAMS 584
Query: 332 DWRKNLVSWNSLISGFAM---NGMAREAVEN-FENMEKAGLRPNHVAFLSVLS 380
+ V W +L+ + +AR E FE L P++V + +LS
Sbjct: 585 IEPGSSV-WETLLGACRIHKDTNLARTVSEKLFE------LDPDNVGYHVLLS 630
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 204/383 (53%), Gaps = 38/383 (9%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D+ + + +C++ G LH V K + V L+ +Y G L
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL------ 484
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
TV W +F D +V++W +I +Y Q KA+
Sbjct: 485 --------TVAWRMFCEA------------------DTNVITWNAMIASYVHCEQSEKAI 518
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
ALF +MV + +P+ +TL+T+ A N G ++ Q +H Y + +++ ++ ALID
Sbjct: 519 ALFDRMVS-ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHE-MNLSLSAALID 576
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAKCG +E + F +K+ V WN +ISG+ M+G A+ F+ ME++ ++P
Sbjct: 577 MYAKCGHLEKSRELFD--AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
FL++LSAC+H GLVE+G K F KM + + P+++HY C+VD+L R+G LEEAE +
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+P + VIW TLL +C H E+G R+ E+ + + + G Y++++N++ G+++
Sbjct: 694 SMPFS-PDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWE 752
Query: 493 DAERLREVIDERIAIKIPGYSLL 515
+AER RE++ E K G+S++
Sbjct: 753 EAERAREMMRESGVGKRAGHSVV 775
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 134/260 (51%), Gaps = 10/260 (3%)
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDR-SVVSWTLVIDAYTRMNQPMKALALFRKM 258
STV N ++ K+ + +A +F R+ + + +W ++ Y +M +K + LFRK+
Sbjct: 366 STVC-NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 259 VEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCG 318
+ GIE + ++ + +++G + L +S+H Y K + + I + N+LIDLY K G
Sbjct: 425 QNL-GIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD-LTISVVNSLIDLYGKMG 482
Query: 319 CIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSV 378
+ A R F E N+++WN++I+ + + +A+ F+ M +P+ + +++
Sbjct: 483 DLTVAWRMFCEAD---TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTL 539
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEV 438
L AC + G +E G + ++ + + + ++ ++DM + G LE++ ++ +
Sbjct: 540 LMACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598
Query: 439 ANDVIWRTLLGACSVHNNVE 458
A V W ++ +H +VE
Sbjct: 599 A--VCWNVMISGYGMHGDVE 616
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 159/394 (40%), Gaps = 59/394 (14%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFF-----TYSSLDTFTFAFLSQA 144
T + L+N+II+ HFS S FF + S D FT + A
Sbjct: 86 TRRDIFLWNSIIKA-----------HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSA 134
Query: 145 CAYSNCTRFGIQLHALVFK-VGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
CA G +H LV K GF + V + YS G L +A VF
Sbjct: 135 CAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF---------- 184
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKM--VEV 261
D M DR VV+WT +I + + + L KM
Sbjct: 185 ---------------------DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
D +P TL F A +NLG +K + +HG+A K G + +++ Y+K G
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF-VQSSMFSFYSKSGNPS 282
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A F+E+ D +++ SW S+I+ A +G E+ + F M+ G+ P+ V +++
Sbjct: 283 EAYLSFRELGD--EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINE 340
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
LV +G F ++ C D ++ M + L AEK+ ++ E N
Sbjct: 341 LGKMMLVPQGKAFHGFVIRHC-FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE-GNK 398
Query: 442 VIWRTLL---GACSVH-NNVEIGQRVTEKILEIE 471
W T+L G H +E+ +++ +EI+
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 227/433 (52%), Gaps = 20/433 (4%)
Query: 87 FHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACA 146
+ ++ T L+ + Y+ QA++ + HSS LD F+ ++CA
Sbjct: 5 YASSCTKLISLTKQLSSYANQGNHEQALNLFLQM--HSSFALP---LDAHVFSLALKSCA 59
Query: 147 YSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNV 206
+ G +HA K F + +V LL MY + A ++FDE+P R+ V WN
Sbjct: 60 AAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNA 119
Query: 207 FINGLVKWGEVELALSVF---DRMRDRSVVSWTLVIDAYTRM-NQPMKALALFRKMVEVD 262
I+ G+V+ A+ ++ D M + S S+ +I + +A+ +RKM+E
Sbjct: 120 MISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYRAIEFYRKMIEFR 177
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI--RITNALIDLYAKCGCI 320
+P +TLL + A + +G +L + +H YA + N+I+ ++ + L++ Y +CG I
Sbjct: 178 -FKPNLITLLALVSACSAIGAFRLIKEIHSYAFR---NLIEPHPQLKSGLVEAYGRCGSI 233
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
F + D +++V+W+SLIS +A++G A A++ F+ ME A + P+ +AFL+VL
Sbjct: 234 VYVQLVFDSMED--RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLK 291
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
ACSH GL +E L +F +M D + HY C+VD+L R GR EEA KV +P E
Sbjct: 292 ACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP-EKPT 350
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREV 500
W LLGAC + +E+ + ++L +E + +YVL+ I++ VGR ++AERLR
Sbjct: 351 AKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLK 410
Query: 501 IDERIAIKIPGYS 513
+ E PG S
Sbjct: 411 MKESGVKVSPGSS 423
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 205/383 (53%), Gaps = 7/383 (1%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D T AC+ G +++ V F+ V + L+ M+ G L +A V
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FD M ++ W + G V G ++ A +F+R + VV WT +++ Y + N+ +AL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
LFR M + GI P L+++ A G ++ + +HGY + V D + AL+D
Sbjct: 265 ELFRCM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV-DKVVGTALVD 322
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAKCGCIE+A F EI + ++ SW SLI G AMNGM+ A++ + ME G+R +
Sbjct: 323 MYAKCGCIETALEVFYEIKE--RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ F++VL+AC+HGG V EG K F+ M + P H C++D+L RAG L+EAE++
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 433 QVPHEVANDV--IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
++ E + ++ +LL A + NV+I +RV EK+ ++E + L+++++ R
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Query: 491 YKDAERLREVIDERIAIKIPGYS 513
++D +R + + K PG S
Sbjct: 501 WEDVTNVRRKMKDLGIRKFPGCS 523
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT + ++ G ++H K G +F YV L+ MY+ G + +VF
Sbjct: 45 DNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVF 104
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
DEMP R V+WN I+ V G E A+ VF RM S + +
Sbjct: 105 DEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD----------------- 147
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
E T V+ L+ A+ NL ++ + ++ + F + +RI NAL+D+
Sbjct: 148 -----------EGTIVSTLSACSALKNL---EIGERIYRFVVTE-FE-MSVRIGNALVDM 191
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFA------------------------- 348
+ KCGC++ A F + D KN+ W S++ G+
Sbjct: 192 FCKCGCLDKARAVFDSMRD--KNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 349 -MNGMAR-----EAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
MNG + EA+E F M+ AG+RP++ +S+L+ C+ G +E+G K+ + +N+
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINEN 308
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVA--NDVIWRTLL 448
++ D +VDM + G +E AL+V +E+ + W +L+
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIE----TALEVFYEIKERDTASWTSLI 352
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 18/252 (7%)
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
K LALF ++ G+ P TL + +I L + + VHGYA K G D ++N+
Sbjct: 29 KVLALFGEL-RGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLE-FDSYVSNS 86
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGL 368
L+ +YA G IE + F E+P ++++VSWN LIS + NG +A+ F+ M +++ L
Sbjct: 87 LMGMYASLGKIEITHKVFDEMP--QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
+ + +S LSACS +E G + + +V + ++ +R +VDM + G L++A
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDMFCKCGCLDKAR 202
Query: 429 KVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVL---MSNIF 485
V + + N W ++ V V G R+ E + E+ D VL M N +
Sbjct: 203 AVFDSMRDK--NVKCWTSM-----VFGYVSTG-RIDEARVLFERSPVKDVVLWTAMMNGY 254
Query: 486 VGVGRYKDAERL 497
V R+ +A L
Sbjct: 255 VQFNRFDEALEL 266
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/321 (38%), Positives = 189/321 (58%), Gaps = 11/321 (3%)
Query: 199 RSTVTWNV-----FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+S V +NV I+ K G++ A +FD M +R++VSW +I Y++ +AL
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+F M+++ GI P +VT L++ A G +L QS+H Y K GF V D I AL+++
Sbjct: 304 MFLDMLDL-GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF-VKDAAIVCALVNM 361
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRPNH 372
YAK G ESA + F+++ +K+ ++W +I G A +G EA+ F+ M EK P+
Sbjct: 362 YAKTGDAESAKKAFEDLE--KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ +L VL ACSH GLVEEG ++F +M + + P + HYGC+VD+L RAGR EEAE++
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+P + N IW LL C +H N+E+ R+ + E E+ G YVL+SNI+ GR+
Sbjct: 480 TMPVK-PNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWA 538
Query: 493 DAERLREVIDERIAIKIPGYS 513
D + +RE + + K+ G+S
Sbjct: 539 DVKLIRESMKSKRVDKVLGHS 559
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 211/467 (45%), Gaps = 94/467 (20%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
S+ ++N++IR YS SP P +A+ F L S D FTF ++ +AC+ +
Sbjct: 71 SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGY------SPDYFTFPYVLKACSGLRDIQ 124
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
FG +H V K GF+ ++YV T LL MY G + +VF+++P WNV V
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ-----WNV-----V 174
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
WG +I + N+ A+ FR+M + +G++ E ++
Sbjct: 175 AWGS---------------------LISGFVNNNRFSDAIEAFREM-QSNGVKANETIMV 212
Query: 273 TIFPAIANLGYIKLCQSVHGYAE----------KRGFNVIDIRITNALIDLYAKCGCIES 322
+ A I + HG+ + K GFNVI + +LID+YAKCG + +
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVI---LATSLIDMYAKCGDLRT 269
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A F +P+ + LVSWNS+I+G++ NG A EA+ F +M G+ P+ V FLSV+ A
Sbjct: 270 ARYLFDGMPE--RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRAS 327
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
G + G + + V+ V D +V+M + G E A+K + E + +
Sbjct: 328 MIQGCSQLG-QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL--EKKDTI 384
Query: 443 IWRTLLGACSVHNN----VEIGQRVTEK-------------------ILEIEKG------ 473
W ++ + H + + I QR+ EK I +E+G
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 474 ----HGGD-----YVLMSNIFVGVGRYKDAERLREVIDERIAIKIPG 511
HG + Y M +I GR+++AERL + + + + I G
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
L+++ + GL+++++ + + +P + F + + A SVF+ + SV W
Sbjct: 19 LVELNQLHGLMIKSSVIRNVIPLSRLID---FCTTCPETMNLSYARSVFESIDCPSVYIW 75
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
+I Y+ P KAL +++M+ G P T + A + L I+ VHG+
Sbjct: 76 NSMIRGYSNSPNPDKALIFYQEMLR-KGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
K GF V ++ ++ L+ +Y CG + R F++IP W N+V+W SLISGF N +
Sbjct: 135 KTGFEV-NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW--NVVAWGSLISGFVNNNRFSD 191
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP--------D 407
A+E F M+ G++ N + +L AC + G K+F+ + P +
Sbjct: 192 AIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFN 250
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+ ++DM + G L A + +P V W +++ S + + E
Sbjct: 251 VILATSLIDMYAKCGDLRTARYLFDGMPERTL--VSWNSIITGYSQNGDAE 299
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 214/392 (54%), Gaps = 9/392 (2%)
Query: 128 FTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLV 187
F+ + TF ACA ++G QLH LV K FQF V T L+ MYS
Sbjct: 224 FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 188 EAAQVFDEMPH-RSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAY 242
A VF E+ R+ ++WN I+G++ G+ E A+ +F+++ + +W +I +
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 243 TRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI 302
+++ + ++A F +M+ V + P+ L ++ A +++ +K + +HG+ K
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAER- 401
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
DI + +LID+Y KCG A R F K+ V WN +ISG+ +G A+E FE
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFEL 461
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
+ + + P+ F +VLSACSH G VE+G + F M + P H GC++D+LGR+G
Sbjct: 462 LREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSG 521
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMS 482
RL EA++V Q+ ++ +LLG+C H + +G+ K+ E+E + +V++S
Sbjct: 522 RLREAKEVIDQMSEPSSSVYS--SLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILS 579
Query: 483 NIFVGVGRYKDAERLREVIDERIAIKIPGYSL 514
+I+ + R++D E +R+VID++ +K+PG SL
Sbjct: 580 SIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 144/265 (54%), Gaps = 37/265 (13%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G+QLH L K GF+ VYV T L+ MYS G V AA++F+++PH+S VT+N FI+GL++
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
G + L SVF+ MR S EP +VT +
Sbjct: 208 NGVMNLVPSVFNLMRKFS-------------------------------SEEPNDVTFVN 236
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
A A+L ++ + +HG K+ F + + ALID+Y+KC C +SA F E+ D
Sbjct: 237 AITACASLLNLQYGRQLHGLVMKKEFQ-FETMVGTALIDMYSKCRCWKSAYIVFTELKDT 295
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
R NL+SWNS+ISG +NG AVE FE ++ GL+P+ + S++S S G V E K
Sbjct: 296 R-NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFK 354
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDML 418
FF +M++ +VP ++ C+ +L
Sbjct: 355 FFERMLS-VVMVPSLK---CLTSLL 375
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 266 PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASR 325
P + T + + A LG + + +H K GF +D+ AL+ +Y K + A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGF-FVDVFTATALVSMYMKVKQVTDALK 87
Query: 326 FFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
E+P+ + + S N+ +SG NG R+A F + +G N V SVL C
Sbjct: 88 VLDEMPE--RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC--- 142
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
G +E G++ + + ++ +V M R G A ++ +VPH+
Sbjct: 143 GDIEGGMQ-LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 199/380 (52%), Gaps = 36/380 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D+ ++ ACA RFG+Q+H + K G +V+V + L+ +YS
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYS------------ 522
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G E+AL VF M ++V+W +I Y+R N P ++
Sbjct: 523 -------------------KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF M+ GI P V++ ++ AI++ + +S+HGY + G D + NALID+
Sbjct: 564 LFNLMLS-QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS-DTHLKNALIDM 621
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCG + A F+++ K+L++WN +I G+ +G A+ F+ M+KAG P+ V
Sbjct: 622 YVKCGFSKYAENIFKKMQ--HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
FLS++SAC+H G VEEG F M D I P++ HY +VD+LGRAG LEEA
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKA 739
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P E A+ IW LL A H+NVE+G EK+L +E G YV + N+++ G +
Sbjct: 740 MPIE-ADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNE 798
Query: 494 AERLREVIDERIAIKIPGYS 513
A +L ++ E+ K PG S
Sbjct: 799 AAKLLGLMKEKGLHKQPGCS 818
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 162/368 (44%), Gaps = 47/368 (12%)
Query: 92 TSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCT 151
++++L+N +I + S ++ + N+S + S FT A AC+ S +
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS----FTGAL--GACSQSENS 288
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
FG Q+H V K+G YV T LL MYS G++ EA VF + + WN +
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
+ AL +F MR +SV+ P TL
Sbjct: 349 AENDYGYSALDLFGFMRQKSVL--------------------------------PDSFTL 376
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
+ + LG +SVH KR I +AL+ LY+KCGC A F+ +
Sbjct: 377 SNVISCCSVLGLYNYGKSVHAELFKRPIQSTST-IESALLTLYSKCGCDPDAYLVFKSME 435
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGLRPNHVAFLSVLSACSHGGLVE 389
+ K++V+W SLISG NG +EA++ F +M + L+P+ SV +AC+ +
Sbjct: 436 E--KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 390 EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLG 449
GL+ M+ +V ++ ++D+ + G E A KV + E N V W +++
Sbjct: 494 FGLQVHGSMIK-TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE--NMVAWNSMI- 549
Query: 450 ACSVHNNV 457
+C NN+
Sbjct: 550 SCYSRNNL 557
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 47/327 (14%)
Query: 112 QAIH-FSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHV 170
QA+H +S H + SS F+T FTF L +AC+ +G +H V +G+++
Sbjct: 42 QALHLYSKH--DGSSPFWT----SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDP 95
Query: 171 YVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR 230
++ T L+ MY G L A QVFD W + + +S R
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFD------------------GWSQSQSGVSA------R 131
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL--CQ 288
V W +ID Y + + + + FR+M+ V G+ P +L + + G + +
Sbjct: 132 DVTVWNSMIDGYFKFRRFKEGVGCFRRML-VFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 289 SVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFA 348
+HG+ + + D + ALID+Y K G A R F EI D + N+V WN +I GF
Sbjct: 191 QIHGFMLRNSLDT-DSFLKTALIDMYFKFGLSIDAWRVFVEIED-KSNVVLWNVMIVGFG 248
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+G+ +++ + + ++ +F L ACS E F ++ C +V
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ----SENSGFGRQI--HCDVVKMG 302
Query: 409 RH---YGC--VVDMLGRAGRLEEAEKV 430
H Y C ++ M + G + EAE V
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETV 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 239 IDAYTRMNQPMKALALFRKMVEVDGIEP------TEVTLLTIFPAIANLGYIKLCQSVHG 292
I A + + ++AL L+ K DG P T +LL A+ NL Y K ++HG
Sbjct: 31 IRALIQKGEYLQALHLYSKH---DGSSPFWTSVFTFPSLLKACSALTNLSYGK---TIHG 84
Query: 293 YAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR-----KNLVSWNSLISGF 347
G+ D I +L+++Y KCG ++ A + F + +++ WNS+I G+
Sbjct: 85 SVVVLGWRY-DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA-CSHGGL-VEEGLKFFNKMVNDCQIV 405
+E V F M G+RP+ + V+S C G EEG + M+ + +
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLD 202
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTL------------------ 447
D ++DM + G +A +V +++ + +N V+W +
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEI-EDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 448 -----------------LGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMS--NIFVGV 488
LGACS N G+++ ++++ H YV S +++
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGL-HNDPYVCTSLLSMYSKC 320
Query: 489 GRYKDAERLRE-VIDERIAI 507
G +AE + V+D+R+ I
Sbjct: 321 GMVGEAETVFSCVVDKRLEI 340
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 34/413 (8%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+++ T A + +AC R G Q+H LV ++ +F +++ L+ MYS G + EA V
Sbjct: 273 VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAV 332
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F M ++ +V+WN I GLV+ ++ A +F++M + +VSWT +I ++ + K +
Sbjct: 333 FGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 253 ALFRKMVEVDGIE------------------------------PTEVTLLTIFPAIANLG 282
LF M E D I P T ++ A A+L
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
+ +HG K V D+ + N+L+ +Y KCG A + F I + N+VS+N+
Sbjct: 453 DLIEGLQIHGRVVKMNI-VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE--PNIVSYNT 509
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
+ISG++ NG ++A++ F +E +G PN V FL++LSAC H G V+ G K+F M +
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSY 569
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQR 462
I P HY C+VD+LGR+G L++A + +P + + V W +LL A H V++ +
Sbjct: 570 NIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGV-WGSLLSASKTHLRVDLAEL 628
Query: 463 VTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+K++E+E YV++S ++ +G+ +D +R+ + + K PG S +
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 32/295 (10%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
LL Y G EA +VF M + V+ + ++G K G + A S+FDRM +R+V++W
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
T +ID Y + LF +M + ++ TL +F A + + +HG
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVS 302
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
+ D+ + N+L+ +Y+K G + A F + + K+ VSWNSLI+G E
Sbjct: 303 RMPLE-FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN--KDSVSWNSLITGLVQRKQISE 359
Query: 356 AVENFENM-------------------------EKAGLRP--NHVAFLSVLSACSHGGLV 388
A E FE M E G+ P +++ + +++SA G
Sbjct: 360 AYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV-ALQVPHEVANDV 442
EE L +F+KM+ ++ P+ + V+ L E ++ V + ND+
Sbjct: 420 EEALCWFHKMLQK-EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 140/317 (44%), Gaps = 25/317 (7%)
Query: 175 GLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVEL--ALSVFDRMRDRSV 232
++ Y+ G + +A QVFDEMP R T ++N I ++K + +L A +F + +++
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIK-NKCDLGKAYELFCDIPEKNA 144
Query: 233 VSWTLVIDAYTRMNQPMKALALFRKM-VEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVH 291
VS+ +I + R + +A L+ + V+ + V L GY++ +
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLL---------SGYLRAGKWNE 195
Query: 292 GYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
+G V ++ ++++ Y K G I A F + + +N+++W ++I G+ G
Sbjct: 196 AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE--RNVITWTAMIDGYFKAG 253
Query: 352 MAREAVENFENMEKAG-LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRH 410
+ F M + G ++ N + AC EG + + +V+ + D+
Sbjct: 254 FFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ-IHGLVSRMPLEFDLFL 312
Query: 411 YGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEI 470
++ M + G + EA+ V + ++ + V W +L+ ++++E
Sbjct: 313 GNSLMSMYSKLGYMGEAKAVFGVMKNK--DSVSWNSLITGLVQR------KQISEAYELF 364
Query: 471 EKGHGGDYVLMSNIFVG 487
EK G D V +++ G
Sbjct: 365 EKMPGKDMVSWTDMIKG 381
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 184 GLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT 243
G L EA +F +M +RS V+W I+ + G++ A VFD M R S+ +I A
Sbjct: 64 GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMI 123
Query: 244 RMNQPM-KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI 302
+ + KA LF D E V+ T+ G + ++ YAE
Sbjct: 124 KNKCDLGKAYELF-----CDIPEKNAVSYATMITGFVRAG--RFDEAEFLYAETP-VKFR 175
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
D +N L+ Y + G A R FQ + K +VS +S++ G+ G +A F+
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMA--VKEVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
M + N + + +++ G E+G F +M
Sbjct: 234 MTER----NVITWTAMIDGYFKAGFFEDGFGLFLRM 265
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 192/363 (52%), Gaps = 37/363 (10%)
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
+ G +LH + K GF + ++ MY+
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYA------------------------------ 487
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
K G + LA +F+R+ R +VSW +I + + P A+ +FR+M V GI V++
Sbjct: 488 -KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM-GVSGICYDCVSI 545
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
A ANL +++HG+ K D+ + LID+YAKCG +++A F+ +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRPNHVAFLSVLSACSHGGLVEE 390
+ KN+VSWNS+I+ +G ++++ F M EK+G+RP+ + FL ++S+C H G V+E
Sbjct: 605 E--KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
G++FF M D I P HY CVVD+ GRAGRL EA + +P + +W TLLGA
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP-PDAGVWGTLLGA 721
Query: 451 CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIP 510
C +H NVE+ + + K+++++ + G YVL+SN ++ ++R ++ ER KIP
Sbjct: 722 CRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIP 781
Query: 511 GYS 513
GYS
Sbjct: 782 GYS 784
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 62/337 (18%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S + TF + CA G+QLH LV G F ++ LL MYS G +A++
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
+F M TVTWN I+G V+ G +E ++
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLME-------------------------------ES 324
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
L F +M+ G+ P +T ++ P+++ ++ C+ +H Y + + +DI +T+ALI
Sbjct: 325 LTFFYEMIS-SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS-LDIFLTSALI 382
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
D Y KC + A F + ++V + ++ISG+ NG+ +++E F + K + PN
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNS--VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 372 HVAFLSVLSACS-----------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGC-VVDMLG 419
+ +S+L HG ++++G N C I GC V+DM
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFD------NRCNI-------GCAVIDMYA 487
Query: 420 RAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
+ GR+ A ++ ++ + V W +++ C+ +N
Sbjct: 488 KCGRMNLAYEIFERLSKR--DIVSWNSMITRCAQSDN 522
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 166/351 (47%), Gaps = 31/351 (8%)
Query: 122 NHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYS 181
+ S F S DT T+ C S + G+ +L F F+ + +G+L
Sbjct: 292 DASKLFRMMSRADTVTWN-----CMISGYVQSGLMEESLTF-----FYEMISSGVLPDAI 341
Query: 182 IGGLLVEAAQVFDEMPH---------RSTVTWNVF-----INGLVKWGEVELALSVFDRM 227
L+ + F+ + + R +++ ++F I+ K V +A ++F +
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 228 RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
VV +T +I Y + +L +FR +V+V I P E+TL++I P I L +KL
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLG 460
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
+ +HG+ K+GF+ I A+ID+YAKCG + A F+ + ++++VSWNS+I+
Sbjct: 461 RELHGFIIKKGFDN-RCNIGCAVIDMYAKCGRMNLAYEIFERLS--KRDIVSWNSMITRC 517
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
A + A++ F M +G+ + V+ + LSAC++ G M+ + D
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH-SLASD 576
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+ ++DM + G L+ A V + + N V W +++ AC H ++
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEK--NIVSWNSIIAACGNHGKLK 625
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 149/370 (40%), Gaps = 52/370 (14%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+ L QAC+ N R G Q+HA + Y +L MY++ G + ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
+R S+ W +I ++ R +ALA + K
Sbjct: 98 -----------------------------LRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
M+ G+ P T + A L K + G + + + ++LI Y +
Sbjct: 129 MLCF-GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF-VASSLIKAYLEY 186
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G I+ S+ F + +K+ V WN +++G+A G ++ F M + PN V F
Sbjct: 187 GKIDVPSKLFDRV--LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDC 244
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCV----VDMLGRAGRLEEAEKVALQ 433
VLS C+ L++ G++ +V V + G + + M + GR ++A K+
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVV-----VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRM 299
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIG---QRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+ A+ V W C + V+ G + +T I G D + S++ V +
Sbjct: 300 MSR--ADTVTWN-----CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 491 YKDAERLREV 500
+++ E +++
Sbjct: 353 FENLEYCKQI 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D + + ACA FG +H + K VY ++ L+ MY+ G L A VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS-----VVSWTLVIDAYTRMNQP 248
M ++ V+WN I G+++ +L +F M ++S +++ +I + +
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 249 MKALALFRKMVEVDGIEPTE 268
+ + FR M E GI+P +
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQ 680
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 241/476 (50%), Gaps = 71/476 (14%)
Query: 70 VHQVHSHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLS---PFPHQAIHFSIHTL----- 121
+ Q+H+ I T GL HH + S L L + + Y+LS P+ ++ F +TL
Sbjct: 25 LKQIHAQIITIGLSHHTY-PLSKLLHLSSTVCLSYALSILRQIPNPSV-FLYNTLISSIV 82
Query: 122 -NHSST-----FFTYSSL----------DTFTFAFLSQACAY-SNCTRFGIQLHALVFKV 164
NH+ST F Y + + FT+ L +A + + R G LHA V K
Sbjct: 83 SNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKF 142
Query: 165 --GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALS 222
+VQ L+ Y+ G L EA S
Sbjct: 143 LEPVNHDRFVQAALVGFYANCGKLREAR-------------------------------S 171
Query: 223 VFDRMRDRSVVSWTLVIDAYT---RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
+F+R+R+ + +W ++ AY ++ + L LF +M + P E++L+ + + A
Sbjct: 172 LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCA 227
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
NLG H Y K ++ + +LIDLY+KCGC+ A + F E+ ++++
Sbjct: 228 NLGEFVRGVWAHVYVLKNNL-TLNQFVGTSLIDLYSKCGCLSFARKVFDEMS--QRDVSC 284
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
+N++I G A++G +E +E ++++ GL P+ F+ +SACSH GLV+EGL+ FN M
Sbjct: 285 YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMK 344
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEI 459
I P + HYGC+VD+LGR+GRLEEAE+ ++P + N +WR+ LG+ H + E
Sbjct: 345 AVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK-PNATLWRSFLGSSQTHGDFER 403
Query: 460 GQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
G+ + +L +E + G+YVL+SNI+ GV R+ D E+ RE++ + K PG S L
Sbjct: 404 GEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 200/377 (53%), Gaps = 36/377 (9%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TF+ + +AC+ + +G Q+HAL+ K FQ ++ + L+++Y++
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL-------------- 405
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
G E + F + + SWT +ID + + Q A LFR
Sbjct: 406 -----------------MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
++ I P E T+ + A A+ + + + GYA K G + + + I +YAK
Sbjct: 449 QLFS-SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAF-TSVKTSSISMYAK 506
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
G + A++ F E+ + ++ +++++IS A +G A EA+ FE+M+ G++PN AFL
Sbjct: 507 SGNMPLANQVFIEVQN--PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
VL AC HGGLV +GLK+F M ND +I P+ +H+ C+VD+LGR GRL +AE + L
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 437 EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAER 496
+ + V WR LL +C V+ + IG+RV E+++E+E G YVL+ NI+ G AE
Sbjct: 625 Q-DHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEE 683
Query: 497 LREVIDERIAIKIPGYS 513
+RE++ +R K P S
Sbjct: 684 VRELMRDRGVKKEPALS 700
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 136/307 (44%), Gaps = 49/307 (15%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+++ FN++I Y+ F QA+ + + LD FT+A C
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANL------KLDKFTYAGALGFCGERCDLD 165
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G LH LV G V++ L+ MYS G L +A +FD R V+WN I+G V
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ G E +P+ LA + DG+ T L
Sbjct: 226 RVGAAE----------------------------EPLNLLAKMHR----DGLNLTTYALG 253
Query: 273 TIFPAIA---NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
++ A N G+I+ ++H Y K G DI + AL+D+YAK G ++ A + F
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGME-FDIVVRTALLDMYAKNGSLKEAIKLFSL 312
Query: 330 IPDWRKNLVSWNSLISGFAM-----NGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+P KN+V++N++ISGF + + EA + F +M++ GL P+ F VL ACS
Sbjct: 313 MPS--KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA 370
Query: 385 GGLVEEG 391
+E G
Sbjct: 371 AKTLEYG 377
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 133/312 (42%), Gaps = 42/312 (13%)
Query: 132 SLDTFTFAFLSQACAYSNCTRF---GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVE 188
+L T+ + +AC + F G+ +H K+G +F + V+T LL MY+ G L E
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 189 AAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQP 248
A ++F MP ++ VT+N I+G ++ E+ + S ++ L +D R
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEI---------TDEASSEAFKLFMDMQRR---- 352
Query: 249 MKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN 308
G+EP+ T + A + ++ + +H K F D I +
Sbjct: 353 --------------GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS-DEFIGS 397
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
ALI+LYA G E + F ++++ SW S+I N A + F + + +
Sbjct: 398 ALIELYALMGSTEDGMQCFASTS--KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCV----VDMLGRAGRL 424
RP ++SAC+ + G + + I I + V + M ++G +
Sbjct: 456 RPEEYTVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 425 EEAEKVALQVPH 436
A +V ++V +
Sbjct: 511 PLANQVFIEVQN 522
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 215/424 (50%), Gaps = 44/424 (10%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
LFN++I+ S P + + L+ + S +TF + ++CA + R G
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNV------SPSNYTFTSVIKSCADLSALRIG 126
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
+H GF YVQ L+ YS K
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYS-------------------------------KC 155
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G++E A VFDRM ++S+V+W ++ + + +A+ +F +M E G EP T +++
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE-SGFEPDSATFVSL 214
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A A G + L VH Y G + +++++ ALI+LY++CG + A F ++ +
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLD-LNVKLGTALINLYSRCGDVGKAREVFDKMKE-- 271
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEK-AGLRPNHVAFLSVLSACSHGGLVEEGLK 393
N+ +W ++IS + +G ++AVE F ME G PN+V F++VLSAC+H GLVEEG
Sbjct: 272 TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGAC 451
+ +M +++P + H+ C+VDMLGRAG L+EA K L + +W +LGAC
Sbjct: 332 VYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGAC 391
Query: 452 SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPG 511
+H N ++G + ++++ +E + G +V++SNI+ G+ + +R+ + K G
Sbjct: 392 KMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVG 451
Query: 512 YSLL 515
YS++
Sbjct: 452 YSVI 455
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 202/378 (53%), Gaps = 36/378 (9%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
FTF+ +AC + R G Q+ FK G + V ++ M+ + +A + F+
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+ ++ V++N F++G + E A + + +R L + A+
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE-----LGVSAF------------- 475
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
T ++ +AN+G I+ + +H K G + + + NALI +Y+
Sbjct: 476 --------------TFASLLSGVANVGSIRKGEQIHSQVVKLGLSC-NQPVCNALISMYS 520
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
KCG I++ASR F + + +N++SW S+I+GFA +G A +E F M + G++PN V +
Sbjct: 521 KCGSIDTASRVFNFMEN--RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
+++LSACSH GLV EG + FN M D +I P + HY C+VD+L RAG L +A + +P
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 436 HEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAE 495
+ A+ ++WRT LGAC VH+N E+G+ KILE++ Y+ +SNI+ G+++++
Sbjct: 639 FQ-ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEEST 697
Query: 496 RLREVIDERIAIKIPGYS 513
+R + ER +K G S
Sbjct: 698 EMRRKMKERNLVKEGGCS 715
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 14/261 (5%)
Query: 218 ELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPA 277
E A VFD+M + +VV+WTL+I +M P +A+ F MV + G E + TL ++F A
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSA 278
Query: 278 IANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC---GCIESASRFFQEIPDWR 334
A L + L + +H +A + G V D+ + L+D+YAKC G ++ + F + D
Sbjct: 279 CAELENLSLGKQLHSWAIRSGL-VDDVECS--LVDMYAKCSADGSVDDCRKVFDRMED-- 333
Query: 335 KNLVSWNSLISGFAMN-GMAREAVENFENMEKAG-LRPNHVAFLSVLSACSHGGLVEEGL 392
+++SW +LI+G+ N +A EA+ F M G + PNH F S AC + G
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ + + + V+ M ++ R+E+A++ + + N V + T L
Sbjct: 394 QVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK--NLVSYNTFLDGTC 450
Query: 453 VHNNVEIGQRVTEKILEIEKG 473
+ N E ++ +I E E G
Sbjct: 451 RNLNFEQAFKLLSEITERELG 471
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 132/301 (43%), Gaps = 41/301 (13%)
Query: 100 IIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHA 159
I RC + FP +AI F + + + D FT + + ACA G QLH+
Sbjct: 241 ITRCMQMG-FPREAIRFFLDMV------LSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 160 LVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVEL 219
+ G V + L+ MY+ G V+
Sbjct: 294 WAIRSGLVDDV--ECSLVDMYA----------------------------KCSADGSVDD 323
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTR-MNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI 278
VFDRM D SV+SWT +I Y + N +A+ LF +M+ +EP T + F A
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLV 338
NL ++ + V G A KRG + + N++I ++ K +E A R F+ + + KNLV
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGL-ASNSSVANSVISMFVKSDRMEDAQRAFESLSE--KNLV 440
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
S+N+ + G N +A + + + L + F S+LS ++ G + +G + +++
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 399 V 399
V
Sbjct: 501 V 501
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 32/253 (12%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D+ TF+ L ++C + R G +HA + + + + L+ +YS G +A V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F+ M R R VVSW+ ++ Y + + A+
Sbjct: 120 FETMR----------------------------RFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+F + +E+ G+ P + + A +N ++ + + G+ K G D+ + +LID
Sbjct: 152 KVFVEFLEL-GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 313 LYAKC-GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
++ K E+A + F ++ + N+V+W +I+ G REA+ F +M +G +
Sbjct: 211 MFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 372 HVAFLSVLSACSH 384
SV SAC+
Sbjct: 269 KFTLSSVFSACAE 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 49/220 (22%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+ FTFA L A R G Q+H+ V K+G + V L+ MYS G + A++V
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F+ M +R+ ++W I G K G ++ L
Sbjct: 532 FNFMENRNVISWTSMITGFAKHG-------------------------------FAIRVL 560
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI--DIRIT--- 307
F +M+E +G++P EVT + I A +++G + G+ R FN + D +I
Sbjct: 561 ETFNQMIE-EGVKPNEVTYVAILSACSHVGLVS-----EGW---RHFNSMYEDHKIKPKM 611
Query: 308 ---NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLI 344
++DL + G + A F +P ++ +++ W + +
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMP-FQADVLVWRTFL 650
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 262 DGIEPTE-VTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-IDIRITNALIDLYAKCGC 319
DGI P + VT ++ + +L + VH A F++ D + N+LI LY+K G
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRLGKLVH--ARLIEFDIEPDSVLYNSLISLYSKSGD 112
Query: 320 IESASRFFQEIPDW-RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSV 378
A F+ + + ++++VSW+++++ + NG +A++ F + GL PN + +V
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC-VVDMLGRA-GRLEEAEKVALQVPH 436
+ ACS+ V G ++ D+ GC ++DM + E A KV ++
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 437 EVANDVIWRTLLGAC 451
N V W ++ C
Sbjct: 232 --LNVVTWTLMITRC 244
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 193/381 (50%), Gaps = 38/381 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT A + + C + G Q+HA K G+ ++V +G+L MY G + A F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D +P V W I+G ++ GE E A VF +MR
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR------------------------- 610
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI-DIRITNALID 312
+ G+ P E T+ T+ A + L ++ + +H A K N D + +L+D
Sbjct: 611 -------LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK--LNCTNDPFVGTSLVD 661
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAKCG I+ A F+ I N+ +WN+++ G A +G +E ++ F+ M+ G++P+
Sbjct: 662 MYAKCGSIDDAYCLFKRIE--MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
V F+ VLSACSH GLV E K M D I P+I HY C+ D LGRAG +++AE +
Sbjct: 720 VTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
+ E A+ ++RTLL AC V + E G+RV K+LE+E YVL+SN++ ++
Sbjct: 780 SMSME-ASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWD 838
Query: 493 DAERLREVIDERIAIKIPGYS 513
+ + R ++ K PG+S
Sbjct: 839 EMKLARTMMKGHKVKKDPGFS 859
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 153/353 (43%), Gaps = 51/353 (14%)
Query: 109 FPHQAIHFSIHTLNHSSTFFTYSSL-------DTFTFAFLSQACAYSNCTRFGIQLHALV 161
F ++ + +H+ +S+ ++ + D TF + + G Q+H +
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 162 FKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELAL 221
K+G + V L+ MY L K+G A
Sbjct: 342 LKLGLDLMLTVSNSLINMYC----------------------------KLRKFG---FAR 370
Query: 222 SVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANL 281
+VFD M +R ++SW VI + ++A+ LF +++ G++P + T+ ++ A ++L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAASSL 429
Query: 282 GY-IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN--LV 338
+ L + VH +A K NV D ++ ALID Y++ C++ A F+ R N LV
Sbjct: 430 PEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAYSRNRCMKEAEILFE-----RHNFDLV 483
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
+WN++++G+ + + ++ F M K G R + +V C + +G +
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 399 VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
+ + D+ ++DM + G + A+ +P V +DV W T++ C
Sbjct: 544 IKSGYDL-DLWVSSGILDMYVKCGDMSAAQFAFDSIP--VPDDVAWTTMISGC 593
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM-- 249
F+E P R + N I+ K G + A VFD+M DR +VSW ++ AY + ++ +
Sbjct: 67 TFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVE 124
Query: 250 ---KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRI 306
+A LFR ++ D + + +TL + + GY+ +S HGYA K G + D +
Sbjct: 125 NIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG-DEFV 182
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
AL+++Y K G ++ F+E+P +++V WN ++ + G EA++ +
Sbjct: 183 AGALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 367 GLRPNHVAF 375
GL PN +
Sbjct: 241 GLNPNEITL 249
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 206/384 (53%), Gaps = 47/384 (12%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D TF + AC + G ++H + G +V V++ LL MY G + EA QVF
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF 323
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
NG+ K ++ VSW+ ++ Y + + KA+
Sbjct: 324 ---------------NGMSK----------------KNSVSWSALLGGYCQNGEHEKAIE 352
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF--NVIDIRITNALI 311
+FR+M E D T+ A A L ++L + +HG +RG NVI + +ALI
Sbjct: 353 IFREMEEKD-----LYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI---VESALI 404
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
DLY K GCI+SASR + ++ +N+++WN+++S A NG EAV F +M K G++P+
Sbjct: 405 DLYGKSGCIDSASRVYSKMSI--RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
+++F+++L+AC H G+V+EG +F M I P HY C++D+LGRAG EEAE +
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Query: 432 LQVPHEVANDV-IWRTLLGACSVHNNV-EIGQRVTEKILEIEKGHGGDYVLMSNIFVGVG 489
+ E ND +W LLG C+ + + + +R+ ++++E+E + YVL+SN++ +G
Sbjct: 523 ERA--ECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIG 580
Query: 490 RYKDAERLREVIDERIAIKIPGYS 513
R+ DA +R+++ R K G S
Sbjct: 581 RHGDALNIRKLMVRRGVAKTVGQS 604
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 157/356 (44%), Gaps = 43/356 (12%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FT + +AC+ R G H +V GF+++ ++ + L +Y + V+A +VF
Sbjct: 162 NEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVF 221
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
DEMP + W T V+ A+++ + +AL
Sbjct: 222 DEMPEPDVICW-------------------------------TAVLSAFSKNDLYEEALG 250
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF M G+ P T T+ A NL +K + +HG G ++ + ++L+D+
Sbjct: 251 LFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS-NVVVESSLLDM 309
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCG + A + F + +KN VSW++L+ G+ NG +A+E F ME+ L
Sbjct: 310 YGKCGSVREARQVFNGMS--KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----Y 363
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F +VL AC+ V G + + V ++ ++D+ G++G ++ A +V +
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVG 489
+ + N + W +L A + + E + ++KG DY+ I G
Sbjct: 423 MS--IRNMITWNAMLSALAQNGRGEEAVSFFNDM--VKKGIKPDYISFIAILTACG 474
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 44/337 (13%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMY-SIGGLLVEAAQVFDEM 196
+A L Q C GIQ HA V K G + V LL +Y +G + E +VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD-- 121
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
F+ + +SWT ++ Y + +KAL +F
Sbjct: 122 --------GRFV---------------------KDAISWTSMMSGYVTGKEHVKALEVFV 152
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
+MV G++ E TL + A + LG ++L + HG GF I++ L LY
Sbjct: 153 EMVSF-GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF-ISSTLAYLYGV 210
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLRPNHVAF 375
A R F E+P+ +++ W +++S F+ N + EA+ F M + GL P+ F
Sbjct: 211 NREPVDARRVFDEMPE--PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 268
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
+VL+AC + +++G + K++ + I ++ ++DM G+ G + EA +V +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS 327
Query: 436 HEVANDVIWRTLLGACSVHNN----VEIGQRVTEKIL 468
+ N V W LLG + +EI + + EK L
Sbjct: 328 KK--NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 362
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 197/363 (54%), Gaps = 36/363 (9%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
QACA ++ G + H L + G + V V T L+ MY
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY---------------------- 309
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
+K E A +VF R+ + VVSW +I +T +++ F M+ +
Sbjct: 310 ---------MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
P + ++ + + + LG+++ + H Y K GF+ + I +L++LY++CG + +
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS-NPFIGASLVELYSRCGSLGN 419
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG-LRPNHVAFLSVLSA 381
AS+ F I K+ V W SLI+G+ ++G +A+E F +M K+ ++PN V FLS+LSA
Sbjct: 420 ASKVFNGIA--LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
CSH GL+ EGL+ F MVND ++ P++ HY +VD+LGR G L+ A ++ ++P
Sbjct: 478 CSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ 537
Query: 442 VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
++ TLLGAC +H N E+ + V +K+ E+E H G Y+LMSN++ G +++ E+LR +
Sbjct: 538 ILG-TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSV 596
Query: 502 DER 504
+R
Sbjct: 597 KQR 599
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 44/363 (12%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
++ +++++ + + P+QA+ F + S + D T L AC + +R
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV-----TPDRVTLITLVSACTKLSNSR 180
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G +H V + GF + + LL Y+ ++ F E
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYA-------KSRAFKE----------------- 216
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
A+++F + ++ V+SW+ VI Y + +AL +F M++ DG EP T+L
Sbjct: 217 -------AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD-DGTEPNVATVL 268
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
+ A A ++ + H A ++G +++++ AL+D+Y KC E A F IP
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLET-EVKVSTALVDMYMKCFSPEEAYAVFSRIP- 326
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRPNHVAFLSVLSACSHGGLVEEG 391
RK++VSW +LISGF +NGMA ++E F M + RP+ + + VL +CS G +E+
Sbjct: 327 -RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
K F+ V + +V++ R G L A KV + + + V+W +L+
Sbjct: 386 -KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA--LKDTVVWTSLITGY 442
Query: 452 SVH 454
+H
Sbjct: 443 GIH 445
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 53/401 (13%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAI-HFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYS 148
T SL +N +++ S + + HFS F D FT +AC
Sbjct: 21 TKRSLYQWNTLLKSLSREKQWEEVLYHFS-------HMFRDEEKPDNFTLPVALKACGEL 73
Query: 149 NCTRFGIQLHALVFK-VGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVF 207
+G +H V K V +YV + L+ MY G ++EA
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEA------------------ 115
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
L +FD + +V+W+ ++ + + P +A+ FR+MV + P
Sbjct: 116 -------------LRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
VTL+T+ A L +L + VHG+ +RGF+ D+ + N+L++ YAK + A F
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN-DLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGL 387
+ I + K+++SW+++I+ + NG A EA+ F +M G PN L VL AC+
Sbjct: 222 KMIAE--KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 388 VEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRT 446
+E+G K + + +++ +VDM + EEA V ++P + DV+ W
Sbjct: 280 LEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK---DVVSWVA 335
Query: 447 LLGACSVHNNVEIGQRVTEK--ILEIEKGHGGDYVLMSNIF 485
L+ +++ + R E+ I+ +E D +LM +
Sbjct: 336 LISGFTLNG---MAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 32/249 (12%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A +F M RS+ W ++ + +R Q + L F M D +P TL A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLPVALKACG 71
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
L + + +HG+ +K D+ + ++LI +Y KCG + A R F E+ + ++V+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE--KPDIVT 129
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAG-LRPNHVAFLSVLSACS-----------HGGL 387
W+S++SGF NG +AVE F M A + P+ V ++++SAC+ HG +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 388 VEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRT 446
+ G ND +V + ++ ++ +EA + + + DVI W T
Sbjct: 190 IRRGFS------NDLSLVNSL------LNCYAKSRAFKEAVNLFKMIAEK---DVISWST 234
Query: 447 LLGACSVHN 455
++ AC V N
Sbjct: 235 VI-ACYVQN 242
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 204/381 (53%), Gaps = 40/381 (10%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TF + AC Y G +H LV K G ++E +V
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFG--------------------VLEEVKVV--- 172
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
N FIN K G++ + +F+ + +++VSW +I + + K LA F
Sbjct: 173 --------NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF- 223
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
M G EP + T L + + ++G ++L Q +HG GF+ IT AL+DLY+K
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC-ITTALLDLYSK 282
Query: 317 CGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
G +E +S F EI PD ++W ++++ +A +G R+A+++FE M G+ P+HV
Sbjct: 283 LGRLEDSSTVFHEITSPD----SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
F +L+ACSH GLVEEG +F M +I P + HY C+VD+LGR+G L++A + ++
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDA 494
P E ++ V W LLGAC V+ + ++G + E++ E+E G +YV++SNI+ G +KDA
Sbjct: 399 PMEPSSGV-WGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDA 457
Query: 495 ERLREVIDERIAIKIPGYSLL 515
R+R ++ ++ ++ G S +
Sbjct: 458 SRIRNLMKQKGLVRASGCSYI 478
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 21/274 (7%)
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
+V + +R + + ++ G A +FD M +R +VSW +I Y+
Sbjct: 55 CKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLG 114
Query: 250 KAL-ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN 308
K L R M+ G P EVT L++ A G + + +HG K G + ++++ N
Sbjct: 115 KCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV-LEEVKVVN 173
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
A I+ Y K G + S+ + F+++ KNLVSWN++I NG+A + + F + G
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSI--KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH 231
Query: 369 RPNHVAFLSVLSACSHGGLVE-----EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
P+ FL+VL +C G+V GL F + I ++D+ + GR
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT------ALLDLYSKLGR 285
Query: 424 LEEAEKVALQVPHEVA--NDVIWRTLLGACSVHN 455
LE++ V HE+ + + W +L A + H
Sbjct: 286 LEDSSTVF----HEITSPDSMAWTAMLAAYATHG 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVH-----GYAEKRGFNVIDIRITNALIDLYAKCG 318
+ + + ++ A+ + I+LC+ +H + + GF I + L+ Y + G
Sbjct: 27 VHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGF------IGDQLVGCYLRLG 80
Query: 319 CIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGLRPNHVAFL 376
A + F E+P+ ++LVSWNSLISG++ G + E M + G RPN V FL
Sbjct: 81 HDVCAEKLFDEMPE--RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
S++SAC +GG EEG + + +V ++ +++ ++ G+ G L + K+ +
Sbjct: 139 SMISACVYGGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS- 196
Query: 437 EVANDVIWRTLL 448
+ N V W T++
Sbjct: 197 -IKNLVSWNTMI 207
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 192/379 (50%), Gaps = 37/379 (9%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
F FA + A + + G QLH ++V L+ MY+ + EA +F
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+P R+TV SWT +I Y + L LF
Sbjct: 412 LPQRTTV-------------------------------SWTALISGYVQKGLHGAGLKLF 440
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
KM + + T T+ A A+ + L + +H + + G N+ ++ + L+D+YA
Sbjct: 441 TKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYA 498
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
KCG I+ A + F+E+PD +N VSWN+LIS A NG A+ F M ++GL+P+ V+
Sbjct: 499 KCGSIKDAVQVFEEMPD--RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
L VL+ACSH G VE+G ++F M I P +HY C++D+LGR GR EAEK+ ++P
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 436 HEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK-GHGGDYVLMSNIFVGVGRYKDA 494
E ++++W ++L AC +H N + +R EK+ +EK YV MSNI+ G ++
Sbjct: 617 FE-PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKV 675
Query: 495 ERLREVIDERIAIKIPGYS 513
+++ + ER K+P YS
Sbjct: 676 RDVKKAMRERGIKKVPAYS 694
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 123/228 (53%), Gaps = 4/228 (1%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
++ A + K GF +++ G + A +V+DEMPH++TV+ N I+G VK G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIE-PTEVTLLTI 274
+V A +FD M DR+VV+WT+++ Y R + +A LFR+M P VT T+
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVID-IRITNALIDLYAKCGCIESASRFFQEIPDW 333
P + VH +A K GF+ + ++N L+ Y + ++ A F+EIP+
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE- 212
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
K+ V++N+LI+G+ +G+ E++ F M ++G +P+ F VL A
Sbjct: 213 -KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 170/428 (39%), Gaps = 73/428 (17%)
Query: 69 AVHQVHSHITTSGLFHHPFHNTSTSLL-------------------------LFNNIIRC 103
AV QVH+ G +PF S LL FN +I
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 104 YSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALV 161
Y ++IH + H + FT+S + A G QLHAL
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA--------LGQQLHALS 276
Query: 162 FKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELAL 221
GF V +L YS ++E +FDEMP
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP------------------------ 312
Query: 222 SVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANL 281
+ VS+ +VI +Y++ +Q +L FR+M + G + T+ ANL
Sbjct: 313 -------ELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANL 364
Query: 282 GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN 341
+++ + +H A + I + + N+L+D+YAKC E A F+ +P ++ VSW
Sbjct: 365 SSLQMGRQLHCQALLATADSI-LHVGNSLVDMYAKCEMFEEAELIFKSLP--QRTTVSWT 421
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND 401
+LISG+ G+ ++ F M + LR + F +VL A + + G + ++
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS 481
Query: 402 CQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQ 461
+ G +VDM + G +++A +V ++P N V W L+ A + + + E
Sbjct: 482 GNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR--NAVSWNALISAHADNGDGEAAI 538
Query: 462 RVTEKILE 469
K++E
Sbjct: 539 GAFAKMIE 546
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 50/258 (19%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D TFA + +A A G QLHA + + G +V+ +GL+ MY+ G + +A QVF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+EMP R+ V+WN I+ G+ E A+
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGA------------------------------ 540
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLG-------YIKLCQSVHGYAEKRGFNVIDIRI 306
F KM+E G++P V++L + A ++ G Y + ++G K+ +
Sbjct: 541 -FAKMIE-SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK-------KH 591
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAM---NGMAREAVENFENM 363
++DL + G A + E+P + + + W+S+++ + +A A E +M
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMP-FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSM 650
Query: 364 EKAGLRPNHVAFLSVLSA 381
EK +V+ ++ +A
Sbjct: 651 EKLRDAAAYVSMSNIYAA 668
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 205/383 (53%), Gaps = 9/383 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D F F+ L +ACA G Q+H + V++ L+ MY+ GLL A VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D + ++T++W ++G K G E AL +F + +++ SWT +I + + + ++A +
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 254 LFRKMVE--VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
+F +M VD ++P + L +I A ANL + VHG GF+ + I+NALI
Sbjct: 224 VFTEMRRERVDILDP--LVLSSIVGACANLAASIAGRQVHGLVIALGFDSC-VFISNALI 280
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
D+YAKC + +A F + +++VSW SLI G A +G A +A+ +++M G++PN
Sbjct: 281 DMYAKCSDVIAAKDIFSRMR--HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
V F+ ++ ACSH G VE+G + F M D I P ++HY C++D+LGR+G L+EAE +
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK-GHGGDYVLMSNIFVGVGR 490
+P ++ W LL AC ++G R+ + ++ K Y+L+SNI+
Sbjct: 399 HTMPFP-PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
Query: 491 YKDAERLREVIDERIAIKIPGYS 513
+ R + E K PG+S
Sbjct: 458 WGKVSEARRKLGEMEVRKDPGHS 480
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 38/256 (14%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
Q CA + LHA + K+G + L+ +Y G A QVFDEMPHR
Sbjct: 11 QLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH- 69
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
++W V+ A + N K L++F +
Sbjct: 70 ------------------------------IAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
G+ P + + A ANLG I + VH + + ++ + ++L+D+YAKCG + S
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNS 158
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A F I KN +SW +++SG+A +G EA+E F + L ++ +++S
Sbjct: 159 AKAVFDSIR--VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGF 212
Query: 383 SHGGLVEEGLKFFNKM 398
G E F +M
Sbjct: 213 VQSGKGLEAFSVFTEM 228
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
LD + + ACA + G Q+H LV +GF V++ L+ MY+ ++ A +
Sbjct: 236 LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDI 295
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F M HR V+W I G+ + G+ E KAL
Sbjct: 296 FSRMRHRDVVSWTSLIVGMAQHGQAE-------------------------------KAL 324
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
AL+ MV G++P EVT + + A +++G+++ + + K ++ L+D
Sbjct: 325 ALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAV 357
L + G ++ A +P + + +W +L+S G + +
Sbjct: 384 LLGRSGLLDEAENLIHTMP-FPPDEPTWAALLSACKRQGRGQMGI 427
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 216/462 (46%), Gaps = 55/462 (11%)
Query: 71 HQVHSHITTSGLFHHPFHNTSTSLL-----LFNNIIRCYSLSPFPHQA-----IHFSIHT 120
Q+H H+T G PF T+ + L + + + +P Q S +T
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 121 LNHSSTFFTYS---------SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVY 171
N T Y S+D+ T L C G LH K G V
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 172 VQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
V + MY +K G VE +FD M +
Sbjct: 193 VLNSFITMY-------------------------------MKCGSVEAGRRLFDEMPVKG 221
Query: 232 VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVH 291
+++W VI Y++ L L+ +M + G+ P TL+++ + A+LG K+ V
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQM-KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVG 280
Query: 292 GYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
E GF V ++ ++NA I +YA+CG + A F +P K+LVSW ++I + M+G
Sbjct: 281 KLVESNGF-VPNVFVSNASISMYARCGNLAKARAVFDIMP--VKSLVSWTAMIGCYGMHG 337
Query: 352 MAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY 411
M + F++M K G+RP+ F+ VLSACSH GL ++GL+ F M + ++ P HY
Sbjct: 338 MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 412 GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIE 471
C+VD+LGRAGRL+EA + +P E + +W LLGAC +H NV++ + K++E E
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVE-PDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 456
Query: 472 KGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ G YVLMSNI+ + R+R ++ ER K PGYS
Sbjct: 457 PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 177/357 (49%), Gaps = 41/357 (11%)
Query: 106 LSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVG 165
L +Q++ FS + S + SS D F+F F+ ++CA + G QLH V K G
Sbjct: 25 LRELAYQSL-FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGG 83
Query: 166 FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS--TVTWNVFINGLVKWGEVELALSV 223
+ +V T L+ MY GL+ +A +VF+E P S +V +N I+G
Sbjct: 84 CETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISG------------- 130
Query: 224 FDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY 283
YT ++ A +FR+M E G+ VT+L + P Y
Sbjct: 131 ------------------YTANSKVTDAAYMFRRMKET-GVSVDSVTMLGLVPLCTVPEY 171
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSL 343
+ L +S+HG K G + ++ + N+ I +Y KCG +E+ R F E+P K L++WN++
Sbjct: 172 LWLGRSLHGQCVKGGLDS-EVAVLNSFITMYMKCGSVEAGRRLFDEMP--VKGLITWNAV 228
Query: 344 ISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ 403
ISG++ NG+A + +E +E M+ +G+ P+ +SVLS+C+H G + G + K+V
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKLVESNG 287
Query: 404 IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIG 460
VP++ + M R G L +A V +P V + V W ++G +H EIG
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMP--VKSLVSWTAMIGCYGMHGMGEIG 342
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 176/311 (56%), Gaps = 4/311 (1%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N FI+ K + A +FD M R+ VSWT++I Y +ALALF M++ G
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK-SGE 353
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+P VTLL++ G ++ + + A+ G ++ I NALID+Y+KCG I A
Sbjct: 354 KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEAR 413
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F P+ K +V+W ++I+G+A+NG+ EA++ F M +PNH+ FL+VL AC+H
Sbjct: 414 DIFDNTPE--KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAH 471
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
G +E+G ++F+ M I P + HY C+VD+LGR G+LEEA ++ + + + IW
Sbjct: 472 SGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK-PDAGIW 530
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDER 504
LL AC +H NV+I ++ E + +E YV M+NI+ G + R+R ++ +R
Sbjct: 531 GALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQR 590
Query: 505 IAIKIPGYSLL 515
K PG S++
Sbjct: 591 NIKKYPGESVI 601
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 33/258 (12%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF F+++ACA +HA + K F V+V T + M+
Sbjct: 51 NNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF------------- 97
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
VK V+ A VF+RM +R +W ++ + + KA +
Sbjct: 98 ------------------VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LFR+M ++ I P VT++T+ + + +KL +++H + G +V + + N I
Sbjct: 140 LFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV-QVTVANTWIST 197
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCG ++SA F+ I + +VSWNS+ +++ G A +A + M + +P+
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 374 AFLSVLSACSHGGLVEEG 391
F+++ ++C + + +G
Sbjct: 258 TFINLAASCQNPETLTQG 275
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
SV +W L I N P+++L LFR+M + G EP T + A A L + C+ V
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMN 350
H + K F D+ + A +D++ KC ++ A++ F+ +P+ ++ +WN+++SGF +
Sbjct: 75 HAHLIKSPF-WSDVFVGTATVDMFVKCNSVDYAAKVFERMPE--RDATTWNAMLSGFCQS 131
Query: 351 GMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM-VNDCQIVPDIR 409
G +A F M + P+ V ++++ + S E+ LK M ++ D++
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 410 HY--GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSV 453
+ G+ G L+ A+ V + V W ++ A SV
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV 233
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 196/377 (51%), Gaps = 36/377 (9%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T+A L Q C G ++HA +F VGF + Y++ LL +Y++ G L A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
R + WN I+G V+ G + L ++ MR +V
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV----------------------- 206
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
P + T ++F A + L ++ + H KR +I + +AL+D+Y K
Sbjct: 207 ---------PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS-NIIVDSALVDMYFK 256
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
C R F ++ +N+++W SLISG+ +G E ++ FE M++ G RPN V FL
Sbjct: 257 CSSFSDGHRVFDQLST--RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFL 314
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
VL+AC+HGGLV++G + F M D I P+ +HY +VD LGRAGRL+EA + ++ P
Sbjct: 315 VVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPC 374
Query: 437 EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAER 496
+ + +W +LLGAC +H NV++ + K LE++ +GG+YV+ +N + G + A +
Sbjct: 375 K-EHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASK 433
Query: 497 LREVIDERIAIKIPGYS 513
+R ++ K PGYS
Sbjct: 434 VRRKMENAGVKKDPGYS 450
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D +TFA + +AC+ + G + HA++ K + ++ V + L+ MY + +VF
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D++ R+ +TW I+G G+V L F++M++
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE------------------------ 303
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-IDIRITNALID 312
+G P VT L + A + G + H Y+ KR + + + + A++D
Sbjct: 304 --------EGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVD 354
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG---MAREAVENFENMEKAGLR 369
+ G ++ A F + P +++ W SL+ ++G + A F ++
Sbjct: 355 TLGRAGRLQEAYEFVMKSP-CKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN-G 412
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVN 400
N+V F + ++C GL E K KM N
Sbjct: 413 GNYVVFANGYASC---GLREAASKVRRKMEN 440
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 232/480 (48%), Gaps = 84/480 (17%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQ 156
+N IIR YS + HF L +S+ S D+FTF L +AC+ + + G
Sbjct: 87 WNAIIRGYSRNN------HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 157 LHALVFKVGFQFHVYVQTG---------------------------------LLQMYSIG 183
+HA VF++GF V+VQ G ++ Y+
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 184 GLLVEAAQVFDEMP------------------------------HRSTVTWNVFING--- 210
G +EA ++F +M H S V + I
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 211 ------LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
K G+V A +FD+M+ +++ W +I Y + +A+ +F +M+ D +
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-V 319
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P +++ + A A +G ++ +S++ Y + + D+ I++ALID++AKCG +E A
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR-DDVFISSALIDMFAKCGSVEGAR 378
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F D +++V W+++I G+ ++G AREA+ + ME+ G+ PN V FL +L AC+H
Sbjct: 379 LVFDRTLD--RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
G+V EG FFN+M D +I P +HY CV+D+LGRAG L++A +V +P + +W
Sbjct: 437 SGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGVTVW 494
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDER 504
LL AC H +VE+G+ +++ I+ + G YV +SN++ + +R + E+
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
I+ +G++ A VFD + + W +I Y+R N AL ++ M ++ + P
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSP 117
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
T + A + L ++++ + VH + GF+ D+ + N LI LYAKC + SA
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA-DVFVQNGLIALYAKCRRLGSARTV 176
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F+ +P + +VSW +++S +A NG EA+E F M K ++P+ VA +SVL+A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 387 LVEEGLKFFNKMVN-DCQIVPDI 408
+++G +V +I PD+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDL 259
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 194/332 (58%), Gaps = 11/332 (3%)
Query: 182 IGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDA 241
I G +V A DE V W+ ++ K G ++ A ++FD++ ++ VVSWT +ID
Sbjct: 240 IHGHIVRAGLDSDE------VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 242 YTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV 301
Y + ++ + +LF ++V P E T + A A+L +L + VHGY + GF+
Sbjct: 294 YFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 302 IDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFE 361
+++L+D+Y KCG IESA P + +LVSW SLI G A NG EA++ F+
Sbjct: 353 YSF-ASSSLVDMYTKCGNIESAKHVVDGCP--KPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 362 NMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRA 421
+ K+G +P+HV F++VLSAC+H GLVE+GL+FF + ++ HY C+VD+L R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 422 GRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLM 481
GR E+ + V ++P + + +W ++LG CS + N+++ + +++ +IE + YV M
Sbjct: 470 GRFEQLKSVISEMPMK-PSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTM 528
Query: 482 SNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+NI+ G++++ ++R+ + E K PG S
Sbjct: 529 ANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 8/349 (2%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T+ L Q C+ + G ++H + GF + + LL+MY+ G LV+A +VFDEM
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
P+R +WNV +NG + G +E A +FD M ++ SWT ++ Y + +QP +AL L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
M V P T+ A A + I+ + +HG+ + G + ++ + ++L+D+Y K
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LWSSLMDMYGK 265
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
CGCI+ A F +I + K++VSW S+I + + RE F + + RPN F
Sbjct: 266 CGCIDEARNIFDKIVE--KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA 323
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
VL+AC+ E G + M P +VDM + G +E A+ V P
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 437 EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
+ V W +L+G C+ + + + + +L + G D+V N+
Sbjct: 383 --PDLVSWTSLIGGCAQNGQPDEALKYFDLLL--KSGTKPDHVTFVNVL 427
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 42/269 (15%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +TFA + ACA G Q+H + +VGF + + + L+ MY+ G + A V
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D P V+W I G + G+ + AL FD
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD---------------------------- 409
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYI-KLCQSVHGYAEKRGFNVIDIRITNALID 312
++ G +P VT + + A + G + K + + EK + T L+D
Sbjct: 410 ----LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT-CLVD 464
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG---MAREAVENFENMEKAGLR 369
L A+ G E E+P + + W S++ G + G +A EA + +E
Sbjct: 465 LLARSGRFEQLKSVISEMP-MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE--- 520
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
N V ++++ + + G EE K +M
Sbjct: 521 -NPVTYVTMANIYAAAGKWEEEGKMRKRM 548
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 206/385 (53%), Gaps = 13/385 (3%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
A CA ++H V K GF+ ++ + L+ +Y G + +A +F ++
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS--------VVSWTLVIDAYTRMNQP 248
++ +WN I V G+++ ALS+F + + + VV+WT VI +
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 249 MKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN 308
+L FR+M + + VT+ I A L + L + +HG+ + + +I + N
Sbjct: 416 DDSLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE-NILVQN 473
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
AL+++YAKCG + S F+ I D K+L+SWNS+I G+ M+G A +A+ F+ M +G
Sbjct: 474 ALVNMYAKCGLLSEGSLVFEAIRD--KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGF 531
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
P+ +A ++VLSACSH GLVE+G + F M + P HY C+VD+LGR G L+EA
Sbjct: 532 HPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEAS 591
Query: 429 KVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV 488
++ +P E V+ LL +C +H NV+I + + ++ +E G Y+L+SNI+
Sbjct: 592 EIVKNMPMEPKVCVL-GALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAG 650
Query: 489 GRYKDAERLREVIDERIAIKIPGYS 513
GR++++ +R + ++ K+ G S
Sbjct: 651 GRWEESANVRALAKKKDLKKVSGSS 675
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 31/388 (7%)
Query: 134 DTFTFAFLSQACAYSNCTRFGI--QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
D + + +AC Y RFG+ H V ++G + +++V LL +Y G + +A
Sbjct: 157 DGYILPLILRACRY--LGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQ 247
+F EMP R+ ++WNV I G + + E A+ +F+ M+ V+WT V+ +++ +
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK 274
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT 307
L F M + G + L F A L + + + VHGY K GF +
Sbjct: 275 FEDVLKYFHLM-RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY-LPSR 332
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK-- 365
NALI +Y K G ++ A F++I + K + SWNSLI+ F G EA+ F +E+
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRN--KGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 366 --AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
++ N V + SV+ C+ G ++ L++F +M +++ + C++ +
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM-QFSKVLANSVTICCILSIC----- 444
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQR-----VTEKILEIEKGHGGDY 478
AE AL + E+ VI RT + + N + ++E L E D
Sbjct: 445 ---AELPALNLGREIHGHVI-RTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
Query: 479 VLMSNIFVGVGRYKDAERLREVIDERIA 506
+ ++I G G + AE+ + D I+
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFDRMIS 528
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 40/300 (13%)
Query: 103 CYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVF 162
C+ S P+ +I S T++ SS + S+ D F + + Q+HA V
Sbjct: 22 CFLTSQCPYTSIS-SPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVL 80
Query: 163 KVGFQFHV-YVQTGLLQMYSIGGLLVEAAQVFDEMPH---RSTVTWNVFINGLVKWGEVE 218
F F + L+ +Y+ GLL++A VF+ + WN + V G E
Sbjct: 81 LSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYE 140
Query: 219 LALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI 278
AL ++ MR R + D Y L I A
Sbjct: 141 NALELYRGMRQRGLTG-----DGYI---------------------------LPLILRAC 168
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLV 338
LG LC++ H + G ++ + N L+ LY K G + A F E+P +N +
Sbjct: 169 RYLGRFGLCRAFHTQVIQIGLKE-NLHVVNELLTLYPKAGRMGDAYNLFVEMP--VRNRM 225
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
SWN +I GF+ AV+ FE M++ +P+ V + SVLS S G E+ LK+F+ M
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
++ T + CA G ++H V + ++ VQ L+ MY+ GLL E + VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPM 249
+ + + ++WN I G G E ALS+FDRM ++ V+ A +
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIK 285
K +F M + G+EP + I + +G++K
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLK 588
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 174/311 (55%), Gaps = 5/311 (1%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
I+ K V+L VF W+ +I + AL LF++M D +EP
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED-VEP 418
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
TL ++ PA A L ++ ++H Y K GF + + L+ +Y+KCG +ESA +
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGF-MSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 327 FQEIPDW--RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F I + K++V W +LISG+ M+G A++ F M ++G+ PN + F S L+ACSH
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
GLVEEGL F M+ + + HY C+VD+LGRAGRL+EA + +P E +W
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE-PTSTVW 596
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDER 504
LL AC H NV++G+ K+ E+E + G+YVL++NI+ +GR+KD E++R +++
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENV 656
Query: 505 IAIKIPGYSLL 515
K PG+S +
Sbjct: 657 GLRKKPGHSTI 667
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 153/334 (45%), Gaps = 40/334 (11%)
Query: 92 TSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCT 151
+SLL +N +IR Y H AI I ++ D +T+ F+++A
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVP----DGYTYPFVAKAAGELKSM 133
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
+ G+ +H + + F YVQ LL MY
Sbjct: 134 KLGLVVHGRILRSWFGRDKYVQNALLAMY------------------------------- 162
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
+ +G+VE+A VFD M++R V+SW +I Y R AL +F MV + ++ T+
Sbjct: 163 MNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN-ESVDLDHATI 221
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
+++ P +L +++ ++VH E++ I + NAL+++Y KCG ++ A F +
Sbjct: 222 VSMLPVCGHLKDLEMGRNVHKLVEEKRLG-DKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
R+++++W +I+G+ +G A+E M+ G+RPN V S++S C V +G
Sbjct: 281 --RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
K + Q+ DI ++ M + R++
Sbjct: 339 -KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIE--PTEVTLL 272
G + A +F+ M S++S+ +VI Y R A+++F +MV +G++ P T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS-EGVKCVPDGYTYP 121
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
+ A L +KL VHG + F D + NAL+ +Y G +E A F + +
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWFGR-DKYVQNALLAMYMNFGKVEMARDVFDVMKN 180
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
++++SWN++ISG+ NG +A+ F+ M + +H +S+L C H +E G
Sbjct: 181 --RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG- 237
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ +K+V + ++ I +V+M + GR++EA V ++ E + + W ++ +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM--ERRDVITWTCMINGYT 295
Query: 453 VHNNVE 458
+VE
Sbjct: 296 EDGDVE 301
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 218/422 (51%), Gaps = 44/422 (10%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
SL+ +N +I Y+ + +A+ + N F FT + + AC NC
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF------SEFTISSVLSACGV-NCDA 178
Query: 153 FGIQ-LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
+ LH L K ++YV T LL +Y+ G++ +A QVF
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF------------------ 220
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
+ M+D+S V+W+ ++ Y + +AL L+R+ + +E + TL
Sbjct: 221 -------------ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM-SLEQNQFTL 266
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
++ A +NL + + +H K GF ++ + ++ +D+YAKCG + + F E+
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGS-NVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
+ KNL WN++ISGFA + +E + FE M++ G+ PN V F S+LS C H GLVEEG
Sbjct: 326 E--KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 383
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
+FF M + P++ HY C+VD+LGRAG L EA ++ +P + IW +LL +C
Sbjct: 384 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS-IWGSLLASC 442
Query: 452 SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPG 511
V+ N+E+ + EK+ E+E + G++VL+SNI+ ++++ + R+++ + K+ G
Sbjct: 443 RVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRG 502
Query: 512 YS 513
S
Sbjct: 503 KS 504
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 7/250 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
NV IN K G VELA VFD M +RS+VSW +I YTR +AL +F +M +G
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRN-EGF 158
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+ +E T+ ++ A C+ +H + K + +++ + AL+DLYAKCG I+ A
Sbjct: 159 KFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID-LNLYVGTALLDLYAKCGMIKDAV 217
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+ F+ + D K+ V+W+S+++G+ N EA+ + ++ L N SV+ ACS+
Sbjct: 218 QVFESMQD--KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
+ EG K + ++ ++ VDM + G L E+ + +V + N +W
Sbjct: 276 LAALIEG-KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK--NLELW 332
Query: 445 RTLLGACSVH 454
T++ + H
Sbjct: 333 NTIISGFAKH 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
D+ + N LI+ Y+KCG +E A + F + + ++LVSWN++I + N M EA++ F
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLE--RSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY--GCVVDMLGR 420
M G + + SVLSAC E K V C D+ Y ++D+ +
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC---IDLNLYVGTALLDLYAK 209
Query: 421 AGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
G +++A +V + + + V W +++ + N E
Sbjct: 210 CGMIKDAVQVFESMQDK--SSVTWSSMVAGYVQNKNYE 245
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 191/362 (52%), Gaps = 36/362 (9%)
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
+FG LH+ K G + V L+ MY+ G + ++ ++F M TVTWN I+
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
V++G+ L V +MR VV P T
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVV--------------------------------PDMATF 512
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
L P A+L +L + +H + G+ +++I NALI++Y+KCGC+E++SR F+ +
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYES-ELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
R+++V+W +I + M G +A+E F +MEK+G+ P+ V F++++ ACSH GLV+EG
Sbjct: 572 --RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
L F KM +I P I HY CVVD+L R+ ++ +AE+ +P + + IW ++L AC
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIK-PDASIWASVLRAC 688
Query: 452 SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPG 511
++E +RV+ +I+E+ G +L SN + + ++ +R+ + ++ K PG
Sbjct: 689 RTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPG 748
Query: 512 YS 513
YS
Sbjct: 749 YS 750
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 195/449 (43%), Gaps = 80/449 (17%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
+ ++ L+N+IIR +S + +A+ F L S S D +TF + +ACA
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEF-YGKLRESKV-----SPDKYTFPSVIKACAGLFD 121
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
G ++ + +GF+ ++V L+ MYS GLL A QVFDEMP R V+WN I+G
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDA----------------------------- 241
G E AL ++ +++ +V + + +
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 242 ----------YTRMNQPMKALALFRKMVEVDGI--------------------------- 264
Y + +P A +F +M D +
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 265 --EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
+P +T+ ++ A +L + L + ++ Y K GF V++ + N LID+YAKCG + +
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF-VLESTVRNILIDVYAKCGDMIT 360
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A F + K+ VSWNS+ISG+ +G EA++ F+ M + +H+ +L ++S
Sbjct: 361 ARDVFNSME--CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
+ ++ G + + I D+ ++DM + G + ++ K+ + + V
Sbjct: 419 TRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG--TGDTV 475
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKILEIE 471
W T++ AC + G +VT ++ + E
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N+ I+ K G++ A VF+ M + VSW +I Y + M+A+ LF+ M+ ++
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE- 404
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+ +T L + L +K + +H K G ID+ ++NALID+YAKCG + +
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI-CIDLSVSNALIDMYAKCGEVGDSL 463
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+ F + + V+WN++IS G ++ M K+ + P+ FL L C+
Sbjct: 464 KIFSSMG--TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA- 520
Query: 385 GGLVEEGLKFFNKMVNDCQI----VPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
K K ++ C + +++ +++M + G LE + +V ++ +
Sbjct: 521 ----SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR--D 574
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILEIEK 472
V W ++ A ++ G++ E ++EK
Sbjct: 575 VVTWTGMIYAYGMYGE---GEKALETFADMEK 603
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D TF CA R G ++H + + G++ + + L++MYS G L +++VF
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLV----IDAYTRMNQPM 249
+ M R VTW I +GE E AL F M +V ++V I A +
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 250 KALALFRKMVEVDGIEP 266
+ LA F KM I+P
Sbjct: 628 EGLACFEKMKTHYKIDP 644
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
T V+ I A+++ + + +H G + D + LID Y+ S+
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDF-FSGKLIDKYSHFREPASSLSV 61
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F+ + KN+ WNS+I F+ NG+ EA+E + + ++ + P+ F SV+ AC+
Sbjct: 62 FRRVSP-AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRT 446
E G + +++ D D+ +VDM R G L A +V ++P V + V W +
Sbjct: 121 DAEMGDLVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP--VRDLVSWNS 177
Query: 447 LLGACSVHNNVE 458
L+ S H E
Sbjct: 178 LISGYSSHGYYE 189
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 175/309 (56%), Gaps = 4/309 (1%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N + K G V+ A +VF+ + + V+SW +I Y + +A+ ++ M E I
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+ T +++ PA + G ++ +HG K G +D+ + +L D+Y KCG +E A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL-YLDVFVVTSLADMYGKCGRLEDAL 506
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F +IP R N V WN+LI+ +G +AV F+ M G++P+H+ F+++LSACSH
Sbjct: 507 SLFYQIP--RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
GLV+EG F M D I P ++HYGC+VDM GRAG+LE A K + + + IW
Sbjct: 565 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ-PDASIW 623
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDER 504
LL AC VH NV++G+ +E + E+E H G +VL+SN++ G+++ + +R + +
Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGK 683
Query: 505 IAIKIPGYS 513
K PG+S
Sbjct: 684 GLRKTPGWS 692
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 211/466 (45%), Gaps = 82/466 (17%)
Query: 72 QVHSHITTSGLFHHPF-HNTSTSLLLFNNIIRCYSLSPFPHQAIH-FSIHTLNHSSTFFT 129
++ ++ L H F H + + +N +I Y + + I FS+ L+ T
Sbjct: 94 NLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT--- 150
Query: 130 YSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEA 189
D TF + +AC G ++H L K GF + VYV L+ +YS + A
Sbjct: 151 ---PDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR--------------------D 229
+FDEMP R +WN I+G + G + AL++ + +R +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 230 RSVV--SWTL-------------VIDAYTRMNQPMKALALFRKMVEVDGI---------- 264
R V S+++ +ID Y + +F +M D I
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 265 ---EP-------TEVTLLTIFPAIANL----------GYIKLCQSVHGYAEKRGFNVIDI 304
+P E+ L I P L G I+ C+SV G+ ++G+ + DI
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 305 RITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENME 364
I NA++ +YAK G ++SA F +P+ +++SWN++ISG+A NG A EA+E + ME
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPN--TDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 365 KAG-LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
+ G + N ++SVL ACS G + +G+K +++ + + D+ + DM G+ GR
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGR 501
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILE 469
LE+A + Q+P N V W TL+ H + E + +++L+
Sbjct: 502 LEDALSLFYQIPR--VNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 129/295 (43%), Gaps = 50/295 (16%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
+T ++ +N II Y+ + F +AI + + + + T+ + AC+ +
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEM-YNIMEEEGEI----AANQGTWVSVLPACSQAGA 466
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFI-- 208
R G++LH + K G V+V T L MY G L +A +F ++P ++V WN I
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 209 NGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTE 268
+G GE KA+ LF++M++ +G++P
Sbjct: 527 HGFHGHGE---------------------------------KAVMLFKEMLD-EGVKPDH 552
Query: 269 VTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
+T +T+ A ++ G + Q + ++ ++D+Y + G +E+A +F +
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 329 EIPDWRKNLVSWNSLISGFAMNG---MAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ + + W +L+S ++G + + A E+ +E P HV + +LS
Sbjct: 613 SMS-LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE-----PEHVGYHVLLS 661
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 206/406 (50%), Gaps = 44/406 (10%)
Query: 135 TFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
T + + L QA A + G +H + + + VYV+T L+ MY G L A VFD
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 195 EMPHRSTVTWNVFINGL-------------------------VKW----------GEVEL 219
M ++ V WN ++GL + W G+ E
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 220 ALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
AL V +M+++ +VVSWT + ++ AL +F KM E +G+ P T+ T+
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLL 403
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
+ L + + VHG+ ++ + D + AL+D+Y K G ++SA F I + K
Sbjct: 404 KILGCLSLLHSGKEVHGFCLRKNL-ICDAYVATALVDMYGKSGDLQSAIEIFWGIKN--K 460
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
+L SWN ++ G+AM G E + F M +AG+ P+ + F SVLS C + GLV+EG K+F
Sbjct: 461 SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYF 520
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHN 455
+ M + I+P I H C+VD+LGR+G L+EA +Q + IW L +C +H
Sbjct: 521 DLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF-IQTMSLKPDATIWGAFLSSCKIHR 579
Query: 456 NVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
++E+ + +++ +E + +Y++M N++ + R++D ER+R ++
Sbjct: 580 DLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 153/305 (50%), Gaps = 9/305 (2%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T L Q C+ G Q+H V ++G + +V + L+ MYS G L + +VF+ M
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKAL 252
R+ +WN ++ K G V+ A+ + D M +V+W ++ Y A+
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
A+ ++M ++ G++P+ ++ ++ A+A G++KL +++HGY + D+ + LID
Sbjct: 211 AVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL-WYDVYVETTLID 268
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y K G + A F + KN+V+WNSL+SG + + ++A MEK G++P+
Sbjct: 269 MYIKTGYLPYARMVFDMMD--AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ + S+ S + G E+ L KM + + P++ + + + G A KV +
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 433 QVPHE 437
++ E
Sbjct: 386 KMQEE 390
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 153 FGIQLHALVFKVGFQ-FHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
G+ +H + K G V + + Y L A ++FDEMP R + WN +
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
++ G E KA+ LFR+M + G + + T+
Sbjct: 65 LRSGNWE-------------------------------KAVELFREM-QFSGAKAYDSTM 92
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
+ + +N + +HGY + G ++ + N+LI +Y++ G +E + + F +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLES-NVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
D +NL SWNS++S + G +A+ + ME GL+P+ V + S+LS + GL ++
Sbjct: 152 D--RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 392 LKFFNKM 398
+ +M
Sbjct: 210 IAVLKRM 216
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 289 SVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFA 348
++HG KRG + D R+ +A + Y +C + A++ F E+P +++ ++WN ++
Sbjct: 8 TIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMP--KRDDLAWNEIVMVNL 65
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+G +AVE F M+ +G + + +L CS+ EG + ++ + ++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESNV 124
Query: 409 RHYGCVVDMLGRAGRLEEAEKV 430
++ M R G+LE + KV
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKV 146
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 204/371 (54%), Gaps = 10/371 (2%)
Query: 146 AYSNCT--RFGIQLHALVFKVGFQFHVYVQTGLLQMYS-IGGLLVEAAQVFDEMPHRSTV 202
AYS C + ++L L+ + + +VY + +L+ + + + + + E
Sbjct: 136 AYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVF 195
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
+ I+ K GE E ALSVFD M + W +I + + ++ AL LF++M
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA- 254
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
G + TL ++ A L ++L H + K ++I + NAL+D+Y KCG +E
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI---LNNALVDMYCKCGSLED 311
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A R F ++ + +++++W+++ISG A NG ++EA++ FE M+ +G +PN++ + VL AC
Sbjct: 312 ALRVFNQMKE--RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
SH GL+E+G +F M I P HYGC++D+LG+AG+L++A K+ ++ E + V
Sbjct: 370 SHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAV 428
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVID 502
WRTLLGAC V N+ + + +K++ ++ G Y L+SNI+ ++ E +R +
Sbjct: 429 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 488
Query: 503 ERIAIKIPGYS 513
+R K PG S
Sbjct: 489 DRGIKKEPGCS 499
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 14/247 (5%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
NV IN VK+ + A +FD+M R+V+SWT +I AY++ KAL L M+ D +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNV 158
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P T ++ + + +++ +H K G D+ + +ALID++AK G E A
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLES-DVFVRSALIDVFAKLGEPEDAL 214
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F E+ + + WNS+I GFA N + A+E F+ M++AG SVL AC+
Sbjct: 215 SVFDEMVT--GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI- 443
L+E G++ +V Q D+ +VDM + G LE+A +V Q+ DVI
Sbjct: 273 LALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKER---DVIT 326
Query: 444 WRTLLGA 450
W T++
Sbjct: 327 WSTMISG 333
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 197/384 (51%), Gaps = 39/384 (10%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S D +T + A G Q+H K G + + V + L MY G L +
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
V MP R+ V WN I G + G E L ++
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY--------------------------- 180
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
KM+++ G P ++T +T+ + ++L Q +H A K G + + + + ++LI
Sbjct: 181 -----KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV-VAVVSSLI 234
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRP 370
+Y+KCGC+ A++ F E D ++ V W+S+IS + +G EA+E F M E+ +
Sbjct: 235 SMYSKCGCLGDAAKAFSERED--EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI 292
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N VAFL++L ACSH GL ++GL+ F+ MV P ++HY CVVD+LGRAG L++AE +
Sbjct: 293 NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAI 352
Query: 431 ALQVPHEVAND-VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVG 489
+P + D VIW+TLL AC++H N E+ QRV ++IL+I+ YVL++N+
Sbjct: 353 IRSMP--IKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 410
Query: 490 RYKDAERLREVIDERIAIKIPGYS 513
R++D +R+ + ++ K G S
Sbjct: 411 RWRDVSEVRKSMRDKNVKKEAGIS 434
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 7/278 (2%)
Query: 177 LQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWT 236
+ MYS G A V+ M ++ ++ N+ ING V+ G++ A VFD M DR + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 237 LVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEK 296
+I + + L+LFR+M + G P E TL ++F A L + + Q +HGY K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 297 RGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREA 356
G +D+ + ++L +Y + G ++ + +P +NLV+WN+LI G A NG
Sbjct: 120 YGLE-LDLVVNSSLAHMYMRNGKLQDGEIVIRSMP--VRNLVAWNTLIMGNAQNGCPETV 176
Query: 357 VENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVD 416
+ ++ M+ +G RPN + F++VLS+CS + +G + + + + ++
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLIS 235
Query: 417 MLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
M + G L +A K + E ++V+W +++ A H
Sbjct: 236 MYSKCGCLGDAAKAFSEREDE--DEVMWSSMISAYGFH 271
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 221/440 (50%), Gaps = 62/440 (14%)
Query: 87 FHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSL-------DTFTFA 139
H++ ++ +N + R YS S P ++I + YS + + TF
Sbjct: 71 LHSSDSTPSTWNMLSRGYSSSDSPVESI-------------WVYSEMKRRGIKPNKLTFP 117
Query: 140 FLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR 199
FL +ACA G Q+ V K GF F VYV L+ +Y +A +VFDE
Sbjct: 118 FLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE---- 173
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV 259
M +R+VVSW ++ A + F +M+
Sbjct: 174 ---------------------------MTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 260 EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC 319
P E T++ + A G + L + VH R ++ R+ AL+D+YAK G
Sbjct: 207 G-KRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELE-LNCRLGTALVDMYAKSGG 262
Query: 320 IESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK-AGLRPNHVAFLSV 378
+E A F+ + D KN+ +W+++I G A G A EA++ F M K + +RPN+V FL V
Sbjct: 263 LEYARLVFERMVD--KNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGV 320
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEV 438
L ACSH GLV++G K+F++M +I P + HYG +VD+LGRAGRL EA ++P E
Sbjct: 321 LCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE- 379
Query: 439 ANDVIWRTLLGACSVHNNVE---IGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAE 495
+ V+WRTLL ACS+H++ + IG++V ++++E+E G+ V+++N F + +A
Sbjct: 380 PDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAA 439
Query: 496 RLREVIDERIAIKIPGYSLL 515
+R V+ E KI G S L
Sbjct: 440 EVRRVMKETKMKKIAGESCL 459
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 191/372 (51%), Gaps = 36/372 (9%)
Query: 144 ACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
ACA + G Q+HA GF + Q L+ +YS G + E+ F++ +
Sbjct: 600 ACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA 659
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
WN ++G + G E AL VF RMN+ +G
Sbjct: 660 WNALVSGFQQSGNNEEALRVF------------------VRMNR--------------EG 687
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
I+ T + A + +K + VH K G++ + + NALI +YAKCG I A
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS-ETEVCNALISMYAKCGSISDA 746
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
+ F E+ KN VSWN++I+ ++ +G EA+++F+ M + +RPNHV + VLSACS
Sbjct: 747 EKQFLEVS--TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
H GLV++G+ +F M ++ + P HY CVVDML RAG L A++ ++P + + ++
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK-PDALV 863
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
WRTLL AC VH N+EIG+ +LE+E YVL+SN++ ++ + R+ + E
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 504 RIAIKIPGYSLL 515
+ K PG S +
Sbjct: 924 KGVKKEPGQSWI 935
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 38/321 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +T+ + + C G Q+H+ + K FQ + YV + L+ MY+ G L A +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ V+W I G ++ + AL+ F +M DR
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR----------------------- 585
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
GI EV L A A L +K Q +H A GF+ D+ NAL+ L
Sbjct: 586 ---------GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS-DLPFQNALVTL 635
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y++CG IE + F++ + ++WN+L+SGF +G EA+ F M + G+ N+
Sbjct: 636 YSRCGKIEESYLAFEQTE--AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F S + A S +++G K + ++ + ++ M + G + +AEK L+
Sbjct: 694 TFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 434 VPHEVANDVIWRTLLGACSVH 454
V N+V W ++ A S H
Sbjct: 753 VS--TKNEVSWNAIINAYSKH 771
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 145/323 (44%), Gaps = 44/323 (13%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
+ F+ + AC G QLH LV K+GF YV L+ +Y G L+ A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
M R V ++ +I+ ++ KA+ LF
Sbjct: 349 MSQRDAV-------------------------------TYNTLINGLSQCGYGEKAMELF 377
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
++M +DG+EP TL ++ A + G + Q +H Y K GF + +I AL++LYA
Sbjct: 378 KRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF-ASNNKIEGALLNLYA 435
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
KC IE+A +F E +N+V WN ++ + + R + F M+ + PN +
Sbjct: 436 KCADIETALDYFLETE--VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC--VVDMLGRAGRLEEAEKVALQ 433
S+L C G +E G + ++++ + + Y C ++DM + G+L+ A + ++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQII---KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 434 VPHEVANDVI-WRTLLGACSVHN 455
DV+ W T++ + +N
Sbjct: 551 F---AGKDVVSWTTMIAGYTQYN 570
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 138/283 (48%), Gaps = 8/283 (2%)
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
A++ + STV N I+ + G V+LA VFD +R + SW +I ++
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+A+ LF M V GI PT ++ A + +++ + +HG K GF+ D + NA
Sbjct: 271 EAIRLFCDMY-VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS-DTYVCNA 328
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
L+ LY G + SA F + +++ V++N+LI+G + G +A+E F+ M GL
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMS--QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
P+ S++ ACS G + G + + + + G ++++ + +E A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 430 VALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK 472
L+ EV N V+W +L A + +++ R+ + ++IE+
Sbjct: 446 YFLET--EVENVVLWNVMLVAYGLLDDLRNSFRIFRQ-MQIEE 485
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 137 TFAFLSQACAYSNCT-RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
T +L + C +N + G +LH+ + K+G + + L Y G L A +VFDE
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
MP R+ TWN I ELA R+++ + LF
Sbjct: 146 MPERTIFTWNKMIK--------ELA--------SRNLIG---------------EVFGLF 174
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGY-IKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
+MV + + P E T + A + + +H +G + + N LIDLY
Sbjct: 175 VRMVS-ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLY 232
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
++ G ++ A R F + K+ SW ++ISG + N EA+ F +M G+ P A
Sbjct: 233 SRNGFVDLARRVFDGLR--LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 375 FLSVLSAC 382
F SVLSAC
Sbjct: 291 FSSVLSAC 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 47/220 (21%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF +A + + + G Q+HA++ K G+ V L+ MY+ G + +A + F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
E+ ++ V+WN IN K G AL FD+M +V
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV--------------------- 789
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLG-------YIKLCQSVHGYAEKRGFNVIDIRI 306
P VTL+ + A +++G Y + S +G + K V
Sbjct: 790 -----------RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV----- 833
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
++D+ + G + A F QE+P + + + W +L+S
Sbjct: 834 --CVVDMLTRAGLLSRAKEFIQEMP-IKPDALVWRTLLSA 870
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 195/342 (57%), Gaps = 7/342 (2%)
Query: 175 GLLQMYSIGGLLVEAAQVFDEMPHRST-VTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
LL Y+ G + A ++F + R T V++N ++G V G + A +F M +
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT 534
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
+W+L++ Y P +A+ +FR+ ++ G+ P VT++ + P A L + L + HGY
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFRE-IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
+ G DIR+ L+D+YAKCG ++ A FQ D R++LV + ++++G+A++G
Sbjct: 594 IIRGGLG--DIRLKGTLLDVYAKCGSLKHAYSVFQS--DARRDLVMFTAMVAGYAVHGRG 649
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
+EA+ + +M ++ ++P+HV ++L+AC H GL+++GL+ ++ + + P + Y C
Sbjct: 650 KEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 414 VVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKG 473
VD++ R GRL++A Q+P E N IW TLL AC+ +N +++G V +L+ E
Sbjct: 710 AVDLIARGGRLDDAYSFVTQMPVE-PNANIWGTLLRACTTYNRMDLGHSVANHLLQAESD 768
Query: 474 HGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
G++VL+SN++ +++ LR ++ ++ K G S L
Sbjct: 769 DTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 123/302 (40%), Gaps = 41/302 (13%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D F + +ACA + G LH VFK+G V +L MY+ + + ++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 194 DEMPHRSTVTWNVFINGL-VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
+M V WN+ + GL V G + +
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGR---------------------------------ETM 106
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
F+ M D +P+ VT + P LG +S+H Y K G D + NAL+
Sbjct: 107 RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEK-DTLVGNALVS 165
Query: 313 LYAKCGCI-ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
+YAK G I A F I D K++VSWN++I+GF+ N M +A +F M K PN
Sbjct: 166 MYAKFGFIFPDAYTAFDGIAD--KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPN 223
Query: 372 HVAFLSVLSACSHGG---LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
+ +VL C+ G + + +V + + +V R GR+EEA
Sbjct: 224 YATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAA 283
Query: 429 KV 430
+
Sbjct: 284 SL 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 37/297 (12%)
Query: 135 TFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
+ TFA + C + G +H+ + K G + V L+ MY+ G +F
Sbjct: 122 SVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGF------IFP 175
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
+ A + FD + D+ VVSW +I ++ N A
Sbjct: 176 D------------------------AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRS 211
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQS---VHGYAEKRGFNVIDIRITNALI 311
F M++ + EP T+ + P A++ C+S +H Y +R + + + N+L+
Sbjct: 212 FCLMLK-EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLV 270
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRP 370
Y + G IE A+ F + K+LVSWN +I+G+A N +A + F N+ K + P
Sbjct: 271 SFYLRVGRIEEAASLFTRMGS--KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ V +S+L C+ + G + + ++ ++ D ++ R G A
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAA 385
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 191 QVFDEMPHRSTVTWNVFI-NGLVKW----GEVELALSVFDRMRDRSVVSWTLVIDAYTRM 245
Q+ + RS + +VF+ N LV + G +E A S+F RM + +VSW +VI Y
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
+ KA LF +V + P VT+++I P A L + + +H Y + + + D
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK 365
+ NALI YA+ G +A F + K+++SWN+++ FA + + + ++
Sbjct: 368 VGNALISFYARFGDTSAAYWAFSLMS--TKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 366 AGLRPNHVAFLSVLSAC 382
+ + V LS+L C
Sbjct: 426 EAITLDSVTILSLLKFC 442
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 211/418 (50%), Gaps = 42/418 (10%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D TF F+ ++ + G LHA K +V+ L+ MY+ G L A QVF
Sbjct: 125 DRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVF 184
Query: 194 DEMPHR----STVTWNVFINGLVK---------------------W----------GEVE 218
+E P R S + WNV ING + W GE+
Sbjct: 185 EESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELN 244
Query: 219 LALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI 278
A +F+ M +++VVSWT +I+ +++ A++ + +M+E G++P E T+ + A
Sbjct: 245 RAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE-KGLKPNEYTIAAVLSAC 303
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLV 338
+ G + +HGY G +D I AL+D+YAKCG ++ A+ F + K+++
Sbjct: 304 SKSGALGSGIRIHGYILDNGIK-LDRAIGTALVDMYAKCGELDCAATVFSNMN--HKDIL 360
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
SW ++I G+A++G +A++ F M +G +P+ V FL+VL+AC + V+ GL FF+ M
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Query: 399 VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV-IWRTLLGACSVHNNV 457
D I P ++HY VVD+LGRAG+L EA ++ +P + D+ W L AC H
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP--INPDLTTWAALYRACKAHKGY 478
Query: 458 EIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ V++ +LE++ G Y+ + G +D E+ R + +RI + G+S +
Sbjct: 479 RRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYI 536
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 71/302 (23%)
Query: 218 ELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPA 277
+ +LS+F +R+ +I T + ++ F M+ + G++P +T + +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRL-GVKPDRLTFPFVLKS 135
Query: 278 IANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD----- 332
+ LG+ L +++H A + F D + +L+D+YAK G ++ A + F+E PD
Sbjct: 136 NSKLGFRWLGRALHA-ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKE 194
Query: 333 ----W------------------------RKNLVSWNSLISGFAMNGMAREAVENFE--- 361
W +N SW++LI G+ +G A + FE
Sbjct: 195 SILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 362 ----------------------------NMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
M + GL+PN +VLSACS G + G++
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLGACS 452
++ D I D +VDM + G L+ A V + H+ D++ W ++ +
Sbjct: 315 IHGYIL-DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK---DILSWTAMIQGWA 370
Query: 453 VH 454
VH
Sbjct: 371 VH 372
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 150/489 (30%), Positives = 230/489 (47%), Gaps = 81/489 (16%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQ 156
+N ++ Y++ P I F+ T S+ F S D FTF + +AC + R G Q
Sbjct: 74 YNTLLSSYAVCDKPRVTI-FAYKTFV-SNGF----SPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSI-------------------------------GGL 185
+H +V K+GF +YVQ L+ Y + GL
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 186 LVEAAQVFDEM---PHRSTV---------------------------------TWNVFIN 209
EA F +M P+ +T T N I+
Sbjct: 188 YKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
VK ++ A+ VF + + VSW +I + +A+ LF M GI+P
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
L ++ A A+LG + + VH Y G D I A++D+YAKCG IE+A F
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIK-WDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
I KN+ +WN+L+ G A++G E++ FE M K G +PN V FL+ L+AC H GLV+
Sbjct: 367 IRS--KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 390 EGLKFFNKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV-IWRTL 447
EG ++F+KM + + + P + HYGC++D+L RAG L+EA ++ +P V DV I +
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP--VKPDVRICGAI 482
Query: 448 LGACSVHNNV-EIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIA 506
L AC + E+ + + + L+IE G YVL+SNIF R+ D R+R ++ +
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGI 542
Query: 507 IKIPGYSLL 515
K+PG S +
Sbjct: 543 SKVPGSSYI 551
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
S S+ ++ +Y ++P + ++ V +G P T +F A I+ + +
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVS-NGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMN 350
HG K GF DI + N+L+ Y CG +A + F E+P +++VSW +I+GF
Sbjct: 129 HGIVTKMGF-YDDIYVQNSLVHFYGVCGESRNACKVFGEMP--VRDVVSWTGIITGFTRT 185
Query: 351 GMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRH 410
G+ +EA++ F M+ + PN ++ VL + G + G ++ ++ +
Sbjct: 186 GLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS-LET 241
Query: 411 YGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
++DM + +L +A +V ++ E + V W +++
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGEL--EKKDKVSWNSMISG 279
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 36/377 (9%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TFA + ACA + +G QLH V +G + V +++MYS G LV A+ +F M
Sbjct: 312 TFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM 371
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
R R ++SW+ +I Y + + F
Sbjct: 372 -------------------------------RCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
M + G +PT+ L ++ N+ I+ + VH A G + + ++LI++Y+K
Sbjct: 401 WMRQ-SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ-NSTVRSSLINMYSK 458
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
CG I+ AS F E R ++VS ++I+G+A +G ++EA++ FE K G RP+ V F+
Sbjct: 459 CGSIKEASMIFGETD--RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
SVL+AC+H G ++ G +FN M + P HYGC+VD+L RAGRL +AEK+ ++
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSW 576
Query: 437 EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAER 496
+ +DV+W TLL AC ++E G+R E+ILE++ V ++NI+ G ++A
Sbjct: 577 K-KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAAN 635
Query: 497 LREVIDERIAIKIPGYS 513
+R+ + + IK PG+S
Sbjct: 636 VRKNMKAKGVIKEPGWS 652
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
DT+TFA +ACA ++G +H V GF + V L MY+
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT------------ 255
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ GE++ L +F+ M +R VVSWT +I AY R+ Q +KA+
Sbjct: 256 -------------------ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
F KM + P E T ++F A A+L + + +H G N + ++N+++ +
Sbjct: 297 TFIKMRNSQ-VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN-DSLSVSNSMMKM 354
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+ CG + SAS FQ + ++++SW+++I G+ G E + F M ++G +P
Sbjct: 355 YSTCGNLVSASVLFQGMRC--RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 374 AFLSVLSACSHGGLVEEG 391
A S+LS + ++E G
Sbjct: 413 ALASLLSVSGNMAVIEGG 430
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S DT + + +AC S+ +G LHA K VYV + LL MY G + ++ +
Sbjct: 105 SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCR 164
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
VF EMP R+ VTW I GLV G + L+ F M +S D YT A
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-----DTYTF------A 213
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
+AL A A L +K +++H + RGF V + + N+L
Sbjct: 214 IAL---------------------KACAGLRQVKYGKAIHTHVIVRGF-VTTLCVANSLA 251
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
+Y +CG ++ F+ + + +++VSW SLI + G +AVE F M + + PN
Sbjct: 252 TMYTECGEMQDGLCLFENMSE--RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPN 309
Query: 372 HVAFLSVLSACS 383
F S+ SAC+
Sbjct: 310 EQTFASMFSACA 321
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD-G 263
N + L+ G + A VFD+M +VSWT +I Y N +AL LF M VD
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
+ P L + A I +S+H YA K + + + ++L+D+Y + G I+ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKS 162
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
R F E+P +N V+W ++I+G G +E + F M ++ + F L AC+
Sbjct: 163 CRVFSEMP--FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 190/342 (55%), Gaps = 5/342 (1%)
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
T +L Y++ G + +A + F+ MP + + N I G + GE+ A VFD M DR
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
+W +I AY R ++AL LF +M + G+ P+ +L++I A L ++ + VH +
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQM-QKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
+ F+ D+ + + L+ +Y KCG + A F K+++ WNS+ISG+A +G+
Sbjct: 357 LVRCQFD-DDVYVASVLMTMYVKCGELVKAKLVFDRFSS--KDIIMWNSIISGYASHGLG 413
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
EA++ F M +G PN V +++L+ACS+ G +EEGL+ F M + + P + HY C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 414 VVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKG 473
VDMLGRAG++++A ++ + + + +W LLGAC H+ +++ + +K+ E E
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIK-PDATVWGALLGACKTHSRLDLAEVAAKKLFENEPD 532
Query: 474 HGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ G YVL+S+I ++ D +R+ + K PG S +
Sbjct: 533 NAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 151/330 (45%), Gaps = 56/330 (16%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNV-------------- 206
VF++ + +V T +++ Y G++ EA +F MP R+ V+W V
Sbjct: 101 VFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKA 160
Query: 207 -----------------FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
I GL + G V+ A +FD MR+R+VV+WT +I Y + N+
Sbjct: 161 RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE--KRGFNVIDIR-- 305
A LF M E TEV+ ++ LGY ++ G E + F V+ ++
Sbjct: 221 VARKLFEVMP-----EKTEVSWTSML-----LGY-----TLSGRIEDAEEFFEVMPMKPV 265
Query: 306 -ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENME 364
NA+I + + G I A R F + D ++ +W +I + G EA++ F M+
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMED--RDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 365 KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRL 424
K G+RP+ + +S+LS C+ ++ G + +V CQ D+ ++ M + G L
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGEL 382
Query: 425 EEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+A+ V + + + ++W +++ + H
Sbjct: 383 VKAKLVFDRFSSK--DIIMWNSIISGYASH 410
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 145 CAY--SNCTRFGIQLHALVFKVGFQFH-VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST 201
C++ S +R G A F QF + ++ Y GL EA Q+FDEM R+
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV 261
V+WN ++G +K + A +VF+ M +R+VVSWT ++ Y + +A +LF +M E
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
+ EV+ +F + + G I + ++ V D+ + +I + G ++
Sbjct: 140 N-----EVSWTVMFGGLIDDGRIDKARKLYDM-----MPVKDVVASTNMIGGLCREGRVD 189
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A F E+ + +N+V+W ++I+G+ N A + FE M + V++ S+L
Sbjct: 190 EARLIFDEMRE--RNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLG 243
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
+ G +E+ +FF M + P I +V G G + +A +V + E ++
Sbjct: 244 YTLSGRIEDAEEFFEVM----PMKPVIACNAMIVG-FGEVGEISKARRVFDLM--EDRDN 296
Query: 442 VIWRTLLGA 450
WR ++ A
Sbjct: 297 ATWRGMIKA 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 145 CAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW 204
CA ++G Q+HA + + F VYV + L+ MY G LV+A VFD + + W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 205 NVFINGLVKWGEVELALSVFDRM 227
N I+G G E AL +F M
Sbjct: 401 NSIISGYASHGLGEEALKIFHEM 423
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 198/381 (51%), Gaps = 36/381 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + + +CA G Q+H +V + + ++ +GL+ +YS
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS------------ 462
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDR-MRDRSVVSWTLVIDAYTRMNQPMKAL 252
+ ++E++ +FD + + + W +I + KAL
Sbjct: 463 -------------------ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
LFR+M + + P E + T+ + + L + + HG K G+ V D + AL D
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDSFVETALTD 562
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y KCG I+SA +FF + RKN V WN +I G+ NG EAV + M +G +P+
Sbjct: 563 MYCKCGEIDSARQFFDAV--LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
+ F+SVL+ACSH GLVE GL+ + M I P++ HY C+VD LGRAGRLE+AEK+A
Sbjct: 621 ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAE 680
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
P++ ++ V+W LL +C VH +V + +RV EK++ ++ YVL+SN + + ++
Sbjct: 681 ATPYK-SSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWD 739
Query: 493 DAERLREVIDERIAIKIPGYS 513
D+ L+ ++++ K PG S
Sbjct: 740 DSAALQGLMNKNRVHKTPGQS 760
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
C G +H + ++G + Y+ LL +Y G A +VFDEM R +WN F+
Sbjct: 21 CKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT 80
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
K G++ A VFD M +R VVSW +I R KAL ++++MV DG P+
Sbjct: 81 FRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV-CDGFLPSRF 139
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI-ESASRFFQ 328
TL ++ A + + HG A K G + +I + NAL+ +YAKCG I + R F+
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDK-NIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 329 EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ + N VS+ ++I G A EAV+ F M + G++ + V ++LS
Sbjct: 199 SLS--QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 43/272 (15%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
FT A + AC+ FG++ H + K G +++V LL MY+ G +V+
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD------- 191
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+ VF+ + + VS+T VI R N+ ++A+ +F
Sbjct: 192 -----------------------YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 256 RKMVEVDGIEPTEVTLLTIFP---------AIANLGYIKLCQSVHGYAEKRGFNVIDIRI 306
R M E G++ V L I +++ + +L + +H A + GF D+ +
Sbjct: 229 RLMCE-KGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGG-DLHL 286
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
N+L+++YAK + A F E+P+ N+VSWN +I GF + ++VE M +
Sbjct: 287 NNSLLEIYAKNKDMNGAELIFAEMPE--VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
G +PN V +SVL AC G VE G + F+ +
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 182/420 (43%), Gaps = 79/420 (18%)
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL- 211
G Q+H L ++GF +++ LL++Y+ + A +F EMP + V+WN+ I G
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 212 ----------------------------------VKWGEVELALSVFDRMRDRSVVSWTL 237
+ G+VE +F + SV +W
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNA 386
Query: 238 VIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKR 297
++ Y+ +A++ FR+M + ++P + TL I + A L +++ + +HG +
Sbjct: 387 MLSGYSNYEHYEEAISNFRQM-QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 445
Query: 298 GFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAV 357
+ + I + LI +Y++C +E + F + + ++ WNS+ISGF N + +A+
Sbjct: 446 EISK-NSHIVSGLIAVYSECEKMEISECIFDDCIN-ELDIACWNSMISGFRHNMLDTKAL 503
Query: 358 ENFENM-EKAGLRPNHVAFLSVLSACS-----------HGGLVEEGL---KFFNKMVND- 401
F M + A L PN +F +VLS+CS HG +V+ G F + D
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 402 ---CQIVPDIRHYGCVV---------DML---GRAGRLEEAEKVALQV--PHEVANDVIW 444
C + R + V +M+ G GR +EA + ++ E + + +
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIEKGHGGD-----YVLMSNIFVGVGRYKDAERLRE 499
++L ACS VE G + + I HG + Y+ + + GR +DAE+L E
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRI---HGIEPELDHYICIVDCLGRAGRLEDAEKLAE 680
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 183/317 (57%), Gaps = 5/317 (1%)
Query: 199 RSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKM 258
R+ N I+ K EV+ A S+F +++ R++VSW +I + + +P+ AL F +M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 259 VEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCG 318
++P T +++ AIA L + +HG + + ++ +T AL+D+YAKCG
Sbjct: 430 -RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK-NVFVTTALVDMYAKCG 487
Query: 319 CIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSV 378
I A F + + +++ +WN++I G+ +G + A+E FE M+K ++PN V FLSV
Sbjct: 488 AIMIARLIFDMMSE--RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEV 438
+SACSH GLVE GLK F M + I + HYG +VD+LGRAGRL EA +Q+P +
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 439 ANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLR 498
A +V + +LGAC +H NV ++ E++ E+ GG +VL++NI+ ++ ++R
Sbjct: 606 AVNV-YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR 664
Query: 499 EVIDERIAIKIPGYSLL 515
+ + K PG S++
Sbjct: 665 VSMLRQGLRKTPGCSMV 681
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 146/286 (51%), Gaps = 41/286 (14%)
Query: 118 IHTLNHSSTFFTYSSLD-----TFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYV 172
+ L+ + FF D + F +L + C R G ++H L+ K GF ++
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 173 QTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV 232
TGL MY+ K +V A VFDRM +R +
Sbjct: 173 MTGLENMYA-------------------------------KCRQVNEARKVFDRMPERDL 201
Query: 233 VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHG 292
VSW ++ Y++ AL + + M E + ++P+ +T++++ PA++ L I + + +HG
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 293 YAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGM 352
YA + GF+ + + I+ AL+D+YAKCG +E+A + F + + +N+VSWNS+I + N
Sbjct: 261 YAMRSGFDSL-VNISTALVDMYAKCGSLETARQLFDGMLE--RNVVSWNSMIDAYVQNEN 317
Query: 353 AREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
+EA+ F+ M G++P V+ + L AC+ G +E G +F +K+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKL 362
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 155/320 (48%), Gaps = 41/320 (12%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G ++H + GF V + T L+ MY+ K
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYA-------------------------------K 283
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
G +E A +FD M +R+VVSW +IDAY + P +A+ +F+KM++ +G++PT+V+++
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMG 342
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
A A+LG ++ + +H + + G + ++ + N+LI +Y KC +++A+ F ++
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDR-NVSVVNSLISMYCKCKEVDTAASMFGKLQS- 400
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
+ LVSWN++I GFA NG +A+ F M ++P+ ++SV++A + + K
Sbjct: 401 -RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-K 458
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSV 453
+ + +V + ++ +VDM + G + A + + + W ++
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER--HVTTWNAMIDGYGT 516
Query: 454 HNNVEIGQRVTEKILEIEKG 473
H G+ E E++KG
Sbjct: 517 HG---FGKAALELFEEMQKG 533
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 148/322 (45%), Gaps = 54/322 (16%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
Q+ LVFK G + QT L+ ++ G + EAA+VF+ + + V ++ + G K
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
+++ AL F RMR D +EP +
Sbjct: 115 DLDKALQFFVRMR--------------------------------YDDVEPVVYNFTYLL 142
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
+ +++ + +HG K GF+ +D+ L ++YAKC + A + F +P+ +
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFS-LDLFAMTGLENMYAKCRQVNEARKVFDRMPE--R 199
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF- 394
+LVSWN++++G++ NGMAR A+E ++M + L+P+ + +SVL A S L+ G +
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 395 -------FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTL 447
F+ +VN +VDM + G LE A ++ + N V W ++
Sbjct: 260 GYAMRSGFDSLVNIST---------ALVDMYAKCGSLETARQLFDGMLER--NVVSWNSM 308
Query: 448 LGACSVHNNVEIGQRVTEKILE 469
+ A + N + + +K+L+
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLD 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYS-SLDTFTFAFLSQACAYSN 149
S +L+ +N +I ++ + P I LN+ S + + DTFT+ + A A +
Sbjct: 400 SRTLVSWNAMILGFAQNGRP-------IDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
T +H +V + +V+V T L+ MY+ G ++ A +FD M R TWN I+
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
G G + AL +F+ M+ + I+P V
Sbjct: 513 GYGTHGFGKAALELFEEMQKGT--------------------------------IKPNGV 540
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-IDIRITNALIDLYAKCGCIESASRFFQ 328
T L++ A ++ G ++ Y K +++ + + A++DL + G + A F
Sbjct: 541 TFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 329 EIP 331
++P
Sbjct: 600 QMP 602
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 204/385 (52%), Gaps = 38/385 (9%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S D + + ++C + R G H L K GF VY+ + L+ +Y
Sbjct: 117 SFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY----------- 165
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
R + GEVE A VF+ M +R+VVSWT +I + + +
Sbjct: 166 -------RDS-------------GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDIC 205
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
L L+ KM + +P + T + A G + +SVH G + I+N+LI
Sbjct: 206 LKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSY-LHISNSLI 263
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFE-NMEKAGLRP 370
+Y KCG ++ A R F + + K++VSWNS+I+G+A +G+A +A+E FE M K+G +P
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSN--KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ + +L VLS+C H GLV+EG KFFN M + P++ HY C+VD+LGR G L+EA ++
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALEL 380
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+P + N VIW +LL +C VH +V G R E+ L +E +V ++N++ VG
Sbjct: 381 IENMPMK-PNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGY 439
Query: 491 YKDAERLREVIDERIAIKIPGYSLL 515
+K+A +R+++ ++ PG S +
Sbjct: 440 WKEAATVRKLMKDKGLKTNPGCSWI 464
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 35/244 (14%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
S + +TF L AC S G +H +G + ++++ L+ MY G L +A
Sbjct: 217 SDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
++FD+ ++ V+WN I G Y + M+
Sbjct: 277 RIFDQFSNKDVVSWNSMIAG-------------------------------YAQHGLAMQ 305
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
A+ LF M+ G +P +T L + + + G +K + + G ++ + L
Sbjct: 306 AIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP-ELNHYSCL 364
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+DL + G ++ A + +P + N V W SL+ ++G + E E+ L P
Sbjct: 365 VDLLGRFGLLQEALELIENMP-MKPNSVIWGSLLFSCRVHGDVWTGIRAAE--ERLMLEP 421
Query: 371 NHVA 374
+ A
Sbjct: 422 DCAA 425
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 202/375 (53%), Gaps = 9/375 (2%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS-- 200
++C + ++ +Q HA +FK+G+ + + + Y A ++ S
Sbjct: 38 ESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPG 97
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
N+ I L+K GE LA V D++V++W L+I Y R Q +AL + M+
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
I+P + + + A A LG + + VH G + I +++AL+D+YAKCG I
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDI 216
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
++ F + R ++ WN++I+GFA +G+A EA+ F ME + P+ + FL +L+
Sbjct: 217 GTSREVFYSVK--RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLT 274
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
CSH GL+EEG ++F M I P + HYG +VD+LGRAGR++EA ++ +P E +
Sbjct: 275 TCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE-PD 333
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREV 500
VIWR+LL + + N E+G+ I + K GDYVL+SNI+ +++ A+++RE+
Sbjct: 334 VVIWRSLLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVREL 390
Query: 501 IDERIAIKIPGYSLL 515
+ + K G S L
Sbjct: 391 MSKEGIRKAKGKSWL 405
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 211/424 (49%), Gaps = 40/424 (9%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
+ ++LFN +I YS +H +++ SL TF L +A A
Sbjct: 412 AAADVVLFNAMIEGYS-RLGTQWELHEALNIFRDMRFRLIRPSL--LTFVSLLRASASLT 468
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
Q+H L+FK G ++ + L+ +YS L ++ VFDEM
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM------------- 515
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV 269
+ + +V W + Y + ++ +AL LF ++ ++ P E
Sbjct: 516 ------------------KVKDLVIWNSMFAGYVQQSENEEALNLFLEL-QLSRERPDEF 556
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
T + A NL ++L Q H KRG + ITNAL+D+YAKCG E A + F
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLEC-NPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
+++V WNS+IS +A +G ++A++ E M G+ PN++ F+ VLSACSH GLVE
Sbjct: 616 AAS--RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 390 EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLG 449
+GLK F M+ I P+ HY C+V +LGRAGRL +A ++ ++P + A ++WR+LL
Sbjct: 674 DGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA-IVWRSLLS 731
Query: 450 ACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
C+ NVE+ + E + + G + ++SNI+ G + +A+++RE + +K
Sbjct: 732 GCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
Query: 510 PGYS 513
PG S
Sbjct: 792 PGRS 795
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 35/228 (15%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
QL + + K GF VYV T L+ Y +K G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFY-------------------------------LKDG 197
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
++ A VFD + ++S V+WT +I +M + +L LF +++E D + P L T+
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME-DNVVPDGYILSTVL 256
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
A + L +++ + +H + + G +D + N LID Y KCG + +A + F +P+ K
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLE-MDASLMNVLIDSYVKCGRVIAAHKLFNGMPN--K 313
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
N++SW +L+SG+ N + +EA+E F +M K GL+P+ A S+L++C+
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 174/390 (44%), Gaps = 56/390 (14%)
Query: 106 LSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVG 165
LS + A+H L S + F D + + + +CA + FG Q+HA K
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKP-DMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
Query: 166 FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG---EVELALS 222
YV L+ MY+ L +A +VFD V +N I G + G E+ AL+
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
+F MR R I P+ +T +++ A A+L
Sbjct: 441 IFRDMRFRL--------------------------------IRPSLLTFVSLLRASASLT 468
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
+ L + +HG K G N +DI +ALID+Y+ C C++ + F E+ K+LV WNS
Sbjct: 469 SLGLSKQIHGLMFKYGLN-LDIFAGSALIDVYSNCYCLKDSRLVFDEMK--VKDLVIWNS 525
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN-- 400
+ +G+ EA+ F ++ + RP+ F ++++A + V+ G +F +++
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 401 -DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLGACSVHNNVE 458
+C P I + ++DM + G E+A K + DV+ W +++ + + H +
Sbjct: 586 LECN--PYITN--ALLDMYAKCGSPEDAHKA---FDSAASRDVVCWNSVISSYANHGEGK 638
Query: 459 IGQRVTEKILEIEKGHGGDYVLMSNIFVGV 488
++ EK++ +G +Y+ FVGV
Sbjct: 639 KALQMLEKMM--SEGIEPNYI----TFVGV 662
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 10/249 (4%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N+ IN + G + A VF++M +R++VSW+ ++ A ++L +F +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 265 EPTEVTLLTIFPAIANL---GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
P E L + A + L G + Q + + K GF+ D+ + LID Y K G I+
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQ-LQSFLVKSGFDR-DVYVGTLLIDFYLKDGNID 200
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A F +P+ K+ V+W ++ISG G + +++ F + + + P+ +VLSA
Sbjct: 201 YARLVFDALPE--KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
CS +E G K + + + D ++D + GR+ A K+ +P++ N
Sbjct: 259 CSILPFLEGG-KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NI 315
Query: 442 VIWRTLLGA 450
+ W TLL
Sbjct: 316 ISWTTLLSG 324
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 81/496 (16%)
Query: 88 HNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAY 147
H ++ L+N++I + + H+ + + H L FTF + +AC
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY------LHGFTFPLVLKACTR 123
Query: 148 SNCTRFGIQLHALVFKVGFQFHVYVQ-------------------------------TGL 176
++ + GI LH+LV K GF V T L
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 177 LQMYSIGGLLVEAAQVFDEMP--------------------------------------- 197
Y+ G EA +F +M
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
+++ +N K G++E A SVFD M ++ +V+W+ +I Y + P + + LF +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
M++ + ++P + +++ + A+LG + L + ++ F + ++ + NALID+YAKC
Sbjct: 304 MLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF-LTNLFMANALIDMYAKC 361
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G + F+E+ + K++V N+ ISG A NG + + F EK G+ P+ FL
Sbjct: 362 GAMARGFEVFKEMKE--KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
+L C H GL+++GL+FFN + + + HYGC+VD+ GRAG L++A ++ +P
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 438 VANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERL 497
N ++W LL C + + ++ + V ++++ +E + G+YV +SNI+ GR+ +A +
Sbjct: 480 -PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEV 538
Query: 498 REVIDERIAIKIPGYS 513
R++++++ KIPGYS
Sbjct: 539 RDMMNKKGMKKIPGYS 554
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 189/362 (52%), Gaps = 37/362 (10%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGF-QFHVYVQTGLLQMYSIGGLLVEAA 190
+LD T L +AC + G +H + + F Y+Q ++ MY
Sbjct: 207 ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY---------- 256
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
VK ++ A +F+ DR+VV WT +I + + + ++
Sbjct: 257 ---------------------VKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
A LFR+M+ + I P + TL I + ++LG ++ +SVHGY + G + + T +
Sbjct: 296 AFDLFRQMLR-ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT-SF 353
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
ID+YA+CG I+ A F +P+ +N++SW+S+I+ F +NG+ EA++ F M+ + P
Sbjct: 354 IDMYARCGNIQMARTVFDMMPE--RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVP 411
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N V F+S+LSACSH G V+EG K F M D +VP+ HY C+VD+LGRAG + EA+
Sbjct: 412 NSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSF 471
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+P + W LL AC +H V++ + EK+L +E YVL+SNI+ G
Sbjct: 472 IDNMPVKPMASA-WGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGM 530
Query: 491 YK 492
++
Sbjct: 531 WE 532
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 145/318 (45%), Gaps = 37/318 (11%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D+F F +AC GI +H L K G YV L++MY+ G + A +V
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FDE+P R++V W V + G +K+ + +F MRD L +DA
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG-----LALDA----------- 210
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+TL+ + A N+ K+ + VHG + +R F + ++ID
Sbjct: 211 ----------------LTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y KC +++A + F+ D +N+V W +LISGFA A EA + F M + + PN
Sbjct: 255 MYVKCRLLDNARKLFETSVD--RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
++L +CS G + G M+ + I D ++ +DM R G ++ A V
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 433 QVPHEVANDVIWRTLLGA 450
+P N + W +++ A
Sbjct: 372 MMPER--NVISWSSMINA 387
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 35/231 (15%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP--HRSTVTWNVFINGLVK 213
Q+HA V GF+ V + + L Y L A F+ +P R+ +WN ++G K
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
++ V+ Y RM + DG++ L+
Sbjct: 85 ----------------SKTCCYSDVLLLYNRMRR------------HCDGVDS--FNLVF 114
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
A LG ++ +HG A K G + D + +L+++YA+ G +ESA + F EIP
Sbjct: 115 AIKACVGLGLLENGILIHGLAMKNGLDKDDY-VAPSLVEMYAQLGTMESAQKVFDEIP-- 171
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+N V W L+ G+ E F M GL + + + ++ AC +
Sbjct: 172 VRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
LLTI L + Q VH GF ++ + ++L + Y + ++ A+ F
Sbjct: 9 ALLTILSQAKTLNHT---QQVHAKVIIHGFE-DEVVLGSSLTNAYIQSNRLDFATSSFNR 64
Query: 330 IPDWRKNLVSWNSLISGFAMNGMA--REAVENFENMEKAGLRPNHVAFLSVLSACSHGGL 387
IP W++N SWN+++SG++ + + + + M + + + + AC GL
Sbjct: 65 IPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 388 VEE-----GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
+E GL N + D + P + V+M + G +E A+KV ++P V N V
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSL------VEMYAQLGTMESAQKVFDEIP--VRNSV 176
Query: 443 IWRTLL 448
+W L+
Sbjct: 177 LWGVLM 182
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 180/326 (55%), Gaps = 6/326 (1%)
Query: 189 AAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQP 248
A FD MP ++ V+W I+G K G+V+ A +F M + + + +I YT+ +P
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 249 MKALALFRKMVEVDG-IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT 307
AL LF +M+E + I+P E+TL ++ A + LG V Y + G + D+ ++
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL-LS 369
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
+LIDLY K G A + F + +K+ VS++++I G +NGMA EA F M +
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLN--KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ PN V F +LSA SH GLV+EG K FN M D + P HYG +VDMLGRAGRLEEA
Sbjct: 428 IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEA 486
Query: 428 EKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVG 487
++ +P + N +W LL A +HNNVE G+ +++E G ++ I+
Sbjct: 487 YELIKSMPMQ-PNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSS 545
Query: 488 VGRYKDAERLREVIDERIAIKIPGYS 513
VGR+ DA +R+ I E+ K G S
Sbjct: 546 VGRWDDARTVRDSIKEKKLCKTLGCS 571
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 16/247 (6%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
+AC G +HA K G VYVQTGL+ +YS G + A + FD++ ++TV
Sbjct: 112 RACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTV 171
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
+WN ++G ++ GE++ A VFD++ ++ VSW L+I +Y + A +LF M
Sbjct: 172 SWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK- 230
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQS-VHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
P +L N +KL ++ +K G + I +I Y K G ++
Sbjct: 231 --SPASWNIL--IGGYVNCREMKLARTYFDAMPQKNGVSWI------TMISGYTKLGDVQ 280
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGLRPNHVAFLSVL 379
SA F+ + +K+ + ++++I+ + NG ++A++ F M + ++P+ + SV+
Sbjct: 281 SAEELFRLMS--KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVV 338
Query: 380 SACSHGG 386
SA S G
Sbjct: 339 SANSQLG 345
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 190/370 (51%), Gaps = 43/370 (11%)
Query: 150 CTRFGIQ-----LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW 204
C RFG +H K GF + VQ ++ Y+ G L +A + F E+ + +++
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISY 377
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N I G V E + +F MR GI
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMR--------------------------------TSGI 405
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P TLL + A ++L + S HGY G+ ++ I NAL+D+Y KCG ++ A
Sbjct: 406 RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY-AVNTSICNALMDMYTKCGKLDVAK 464
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
R F + ++++VSWN+++ GF ++G+ +EA+ F +M++ G+ P+ V L++LSACSH
Sbjct: 465 RVFDTMH--KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Query: 385 GGLVEEGLKFFNKMV-NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
GLV+EG + FN M D ++P I HY C+ D+L RAG L+EA ++P E V+
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
TLL AC + N E+G V++K+ + + VL+SN + R++DA R+R + +
Sbjct: 583 G-TLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKK 640
Query: 504 RIAIKIPGYS 513
R +K PGYS
Sbjct: 641 RGLLKTPGYS 650
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 50/298 (16%)
Query: 100 IIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHA 159
+IR Y+ + F +A+ LN Y T+ F+ +ACA G +H+
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKY------TYPFVLKACAGLRAIDDGKLIHS 127
Query: 160 LVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVEL 219
V F +YV T L+ Y+ K GE+E+
Sbjct: 128 HVNCSDFATDMYVCTALVDFYA-------------------------------KCGELEM 156
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A+ VFD M R +V+W +I ++ + LF M +DG+ P T++ +FPA+
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALG 216
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
G ++ ++VHGY + GF+ D+ + ++D+YAK CI A R F D++KN V+
Sbjct: 217 RAGALREGKAVHGYCTRMGFSN-DLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVT 273
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS------VLSACSHGGLVEEG 391
W+++I G+ N M +EA E F M L ++VA ++ +L C+ G + G
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 54/312 (17%)
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
R G +H ++GF + V+TG+L +Y+ ++ A +VFD ++ VT
Sbjct: 222 REGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT-------- 273
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIE-PTEVT 270
W+ +I Y +A +F +M+ D + T V
Sbjct: 274 -----------------------WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
+ I A G + + VH YA K GF ++D+ + N +I YAK G + A R F EI
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGF-ILDLTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
K+++S+NSLI+G +N E+ F M +G+RP+ L VL+ACSH +
Sbjct: 370 G--LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Query: 391 GLKFFNKMVNDCQIVPDIRHYG-------CVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
G + C + Y ++DM + G+L+ A++V H+ D++
Sbjct: 428 G--------SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV-FDTMHK--RDIV 476
Query: 444 -WRTLLGACSVH 454
W T+L +H
Sbjct: 477 SWNTMLFGFGIH 488
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 216 EVELALSVFDRMRDRSV--VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
EVELA VFD + + ++W L+I AY + KAL L+ KM+ G+ PT+ T
Sbjct: 50 EVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLN-SGVRPTKYTYPF 108
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
+ A A L I + +H + F D+ + AL+D YAKCG +E A + F E+P
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDF-ATDMYVCTALVDFYAKCGELEMAIKVFDEMP-- 165
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEK-AGLRPNHVAFLSVLSACSHGGLVEEG 391
++++V+WN++ISGF+++ + + F +M + GL PN + + A G + EG
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 286 LCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLIS 345
L Q +H + KR + + L LYA C +E A F EIP R N ++W+ +I
Sbjct: 17 LGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIR 76
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIV 405
+A N A +A++ + M +G+RP + VL AC+ +++G K + VN
Sbjct: 77 AYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG-KLIHSHVNCSDFA 135
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
D+ +VD + G LE A KV ++P + V W ++ S+H
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMPKR--DMVAWNAMISGFSLH 182
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 187/358 (52%), Gaps = 5/358 (1%)
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
+HA + K + + T L+ Y G L A VF+ M + V I+G + G
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
VE A +F+ + + +V + +++ ++R + K ++ G P T ++
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
A + L ++ Q VH K G I++ ++L+D+YAKCG I A R F ++ + KN
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGV-YTHIKMGSSLLDMYAKCGGINDARRVFDQMQE--KN 338
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+ SW S+I G+ NG EA+E F M++ + PN+V FL LSACSH GLV++G + F
Sbjct: 339 VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFE 398
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
M D + P + HY C+VD++GRAG L +A + A +P +D IW LL +C++H N
Sbjct: 399 SMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD-IWAALLSSCNLHGN 457
Query: 457 VEIGQRVTEKILEIE-KGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
VE+ ++ ++ G Y+ +SN++ ++ + ++REV+ R K G S
Sbjct: 458 VELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 164/390 (42%), Gaps = 67/390 (17%)
Query: 100 IIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTF-AFLSQACAYSNCTRFGIQLH 158
I R S+SP + H+S L + SSL + A Q S + G ++H
Sbjct: 3 IFRFTSISPRILPSNHYSTFPLKQN-----VSSLSPAKYIAGALQEHINSPAPKAGKKIH 57
Query: 159 ALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVE 218
A + K GFQ + + LL ++ G L A QVFDE+P + +N I+G +K G V+
Sbjct: 58 ADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVK 117
Query: 219 LALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI 278
L + RM + D YT L++ K G I P
Sbjct: 118 ELLLLVQRMSYSGEKA-----DGYT--------LSMVLKASNSRGS-------TMILPR- 156
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR---- 334
LC+ VH K + D+ IT AL+D Y K G +ESA F+ + D
Sbjct: 157 ------SLCRLVHARIIKCDVELDDVLIT-ALVDTYVKSGKLESARTVFETMKDENVVCC 209
Query: 335 -------------------------KNLVSWNSLISGFAMNG-MAREAVENFENMEKAGL 368
K++V +N+++ GF+ +G A+ +V+ + +M++AG
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
PN F SV+ ACS E G + +++ + I+ ++DM + G + +A
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 429 KVALQVPHEVANDVIWRTLLGACSVHNNVE 458
+V Q+ + N W +++ + N E
Sbjct: 329 RVFDQMQEK--NVFSWTSMIDGYGKNGNPE 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TFA + AC+ G Q+HA + K G H+ + + LL MY+ G + +A +VFD+M
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
++ +W I+G K G E AL +F RM++ FR
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE-------------------------FR 369
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
IEP VT L A ++ G + + ++ + ++DL +
Sbjct: 370 -------IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGR 422
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
G + A F + +P+ R + W +L+S ++G
Sbjct: 423 AGDLNKAFEFARAMPE-RPDSDIWAALLSSCNLHG 456
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 179/320 (55%), Gaps = 9/320 (2%)
Query: 199 RSTVTWNVFINGLV-----KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
RS V ++++N + K GE LA +VF + + SW ++I +Y + KA+
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
++ +MV V G++P VT ++ PA + L ++ + +H + D + +AL+D+
Sbjct: 397 VYDQMVSV-GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET-DELLLSALLDM 454
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+KCG + A R F IP +K++VSW +IS + +G REA+ F+ M+K GL+P+ V
Sbjct: 455 YSKCGNEKEAFRIFNSIP--KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGV 512
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
L+VLSAC H GL++EGLKFF++M + I P I HY C++D+LGRAGRL EA ++ Q
Sbjct: 513 TLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
P N + TL AC +H +G R+ ++E Y+++ N++ +
Sbjct: 573 TPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDA 632
Query: 494 AERLREVIDERIAIKIPGYS 513
A R+R + E K PG S
Sbjct: 633 ARRVRLKMKEMGLRKKPGCS 652
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 167/369 (45%), Gaps = 45/369 (12%)
Query: 84 HHPFHN--TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFL 141
H F N + + ++N+++ YS + H + LN S D+FTF +
Sbjct: 59 RHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICV-----PDSFTFPNV 113
Query: 142 SQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST 201
+A G +H LV K G+ V V + L+ MY+
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYA-------------------- 153
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV 261
+N+F N +L VFD M +R V SW VI + + + KAL LF +M E
Sbjct: 154 -KFNLFEN----------SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM-ES 201
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
G EP V+L A + L +++ + +H K+GF +D + +AL+D+Y KC C+E
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE-LDEYVNSALVDMYGKCDCLE 260
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A FQ++P RK+LV+WNS+I G+ G ++ VE M G RP+ S+L A
Sbjct: 261 VAREVFQKMP--RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
CS + G KF + V + DI ++D+ + G AE V + +VA
Sbjct: 319 CSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 442 VIWRTLLGA 450
W ++ +
Sbjct: 378 --WNVMISS 384
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 43/238 (18%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D TF + AC+ G Q+H + + + + + LL MYS G EA ++F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ +P + V+W V I+ AY QP +AL
Sbjct: 469 NSIPKKDVVSWTVMIS-------------------------------AYGSHGQPREALY 497
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID--IRITNALI 311
F +M + G++P VTLL + A + G I + + +++ R I+ I + +I
Sbjct: 498 QFDEMQKF-GLKPDGVTLLAVLSACGHAGLID--EGLKFFSQMRSKYGIEPIIEHYSCMI 554
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAM-------NGMAREAVENFEN 362
D+ + G + A Q+ P+ N ++L S + + +AR VEN+ +
Sbjct: 555 DILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPD 612
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 199/378 (52%), Gaps = 35/378 (9%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFH-VYVQTGLLQMYSIGGLLVEAAQVFDE 195
TFA + +AC G Q H + K GF Y+ LL MY + EA +F E
Sbjct: 631 TFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSE 690
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+ +S+V WT ++ +++ +AL +
Sbjct: 691 LSS------------------------------PKSIVLWTGMMSGHSQNGFYEEALKFY 720
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
++M DG+ P + T +T+ + L ++ +++H + +D +N LID+YA
Sbjct: 721 KEMRH-DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD-LDELTSNTLIDMYA 778
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
KCG ++ +S+ F E+ R N+VSWNSLI+G+A NG A +A++ F++M ++ + P+ + F
Sbjct: 779 KCGDMKGSSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
L VL+ACSH G V +G K F M+ I + H C+VD+LGR G L+EA+ ++
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF-IEAQ 896
Query: 436 HEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAE 495
+ + +W +LLGAC +H + G+ EK++E+E + YVL+SNI+ G ++ A
Sbjct: 897 NLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKAN 956
Query: 496 RLREVIDERIAIKIPGYS 513
LR+V+ +R K+PGYS
Sbjct: 957 ALRKVMRDRGVKKVPGYS 974
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 173/351 (49%), Gaps = 40/351 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF+ + CA FG Q+H + K+G + + Y L+ MY+ + +A +VF
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPM 249
+ + +TV W +G VK G E A+ VF+RMRD +++ VI+ Y R+ +
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK 278
Query: 250 KALALFRKMVEVD------------------------------GIEPTEVTLLTIFPAIA 279
A LF +M D ++ T TL ++ AI
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
+ + L VH A K G +I + ++L+ +Y+KC +E+A++ F+ + + KN V
Sbjct: 339 IVANLDLGLVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE--KNDVF 395
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
WN++I G+A NG + + +E F +M+ +G + F S+LS C+ +E G +F + ++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
++ ++ +VDM + G LE+A ++ ++ ++V W T++G+
Sbjct: 456 KK-KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR--DNVTWNTIIGS 503
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 193/443 (43%), Gaps = 78/443 (17%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+ +N +IR Y+ + H+ + + SS + ++D FTF L CA S+ G
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDM--KSSGY----NIDDFTFTSLLSTCAASHDLEMG 447
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
Q H+++ K +++V L+ MY+ K
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYA-------------------------------KC 476
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G +E A +F+RM DR V+W +I +Y + +A LF++M + GI L +
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM-NLCGIVSDGACLAST 535
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A ++ + + VH + K G + D+ ++LID+Y+KCG I+ A + F +P+W
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDR-DLHTGSSLIDMYSKCGIIKDARKVFSSLPEW- 593
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS----------- 383
++VS N+LI+G++ N + EAV F+ M G+ P+ + F +++ AC
Sbjct: 594 -SVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 384 HGGLVEEGLK-------------FFNK--MVNDCQIVPDIRHYGCVVDMLG------RAG 422
HG + + G + N M C + ++ +V G + G
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 423 RLEEAEKVALQVPHE--VANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVL 480
EEA K ++ H+ + + + T+L CSV +++ G+ + I + H D +
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL--AHDLDELT 769
Query: 481 MSNIFVGVGRYKDAERLREVIDE 503
+ + + D + +V DE
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDE 792
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 53/343 (15%)
Query: 186 LVEAAQVFDEMPHRSTVTW----------------------NVFINGLVKWGEVELALSV 223
L ++ +VFDEMP R + N ++ K +V A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 224 FDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY 283
FD + ++ V +W ++ Y+ + +P K L F + E + I P + T + A
Sbjct: 118 FDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETN 175
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSL 343
++ + +H K G + AL+D+YAKC I A R F+ I D N V W L
Sbjct: 176 VEFGRQIHCSMIKMGLER-NSYCGGALVDMYAKCDRISDARRVFEWIVD--PNTVCWTCL 232
Query: 344 ISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ 403
SG+ G+ EAV FE M G RP+H+AF++V++ G +++ F +M +
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS--- 289
Query: 404 IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRT------LLGACSVHNNV 457
PD+ + ++ G+ G E VA++ + + T +L A + N+
Sbjct: 290 --PDVVAWNVMISGHGKRG----CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 458 EIGQRVTEKILEIEKGHGGDYVLMSNIFVG---VGRYKDAERL 497
++G V + +++ L SNI+VG V Y E++
Sbjct: 344 DLGLVVHAEAIKLG--------LASNIYVGSSLVSMYSKCEKM 378
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 44/266 (16%)
Query: 89 NTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYS 148
++ S++L+ ++ +S + F +A+ F + H D TF + + C+
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKF-YKEMRHDGVL-----PDQATFVTVLRVCSVL 745
Query: 149 NCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST-VTWNVF 207
+ R G +H+L+F + L+ MY+ G + ++QVFDEM RS V+WN
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
ING K G E AL +FD MR ++ P
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIM--------------------------------PD 833
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN--ALIDLYAKCGCIESASR 325
E+T L + A ++ G + + + + G I+ R+ + ++DL + G ++ A
Sbjct: 834 EITFLGVLTACSHAGKVSDGRKI--FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 326 FFQEIPDWRKNLVSWNSLISGFAMNG 351
F E + + + W+SL+ ++G
Sbjct: 892 FI-EAQNLKPDARLWSSLLGACRIHG 916
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 200/345 (57%), Gaps = 12/345 (3%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
+L +Y + +A + F+++P ++ W++ ++G + G+V A ++F R+ R +V W
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
+I Y + A+ F M + +G EP VT+ +I A A G + + + VH
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNM-QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
RG ++ ++NALID+YAKCG +E+A+ F+ I +++ NS+IS A++G +E
Sbjct: 302 HRGIE-LNQFVSNALIDMYAKCGDLENATSVFESIS--VRSVACCNSMISCLAIHGKGKE 358
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVV 415
A+E F ME L+P+ + F++VL+AC HGG + EGLK F++M + P+++H+GC++
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLI 417
Query: 416 DMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHG 475
+LGR+G+L+EA ++ ++ H ND + LLGAC VH + E+ ++V KI+E
Sbjct: 418 HLLGRSGKLKEAYRLVKEM-HVKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSIT 475
Query: 476 GDY-----VLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
Y +SN++ R++ AE LR +++R K PG S L
Sbjct: 476 NSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 14/280 (5%)
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G LH+ K G V V + L+ MY G +V A +VFDEMP R+ TWN I G +
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 213 KWGEVELALSVFDRMR-DRSVVSWTLVIDAYTRMNQPMKALALFRKM-VEVDGIEPTEVT 270
G+ LA +F+ + R+ V+W +I Y + + KA LF +M E+ ++ V
Sbjct: 124 SNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV- 182
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
+L ++ + N + EK F + + ++ Y + G + A F +
Sbjct: 183 MLGVY--VNNRKMEDARKFFEDIPEKNAF------VWSLMMSGYFRIGDVHEARAIFYRV 234
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
+ ++LV WN+LI+G+A NG + +A++ F NM+ G P+ V S+LSAC+ G ++
Sbjct: 235 --FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDV 292
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
G + + ++N I + ++DM + G LE A V
Sbjct: 293 G-REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSV 331
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 82 LFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSL----DTFT 137
+F+ F + L+++N +I Y+ + + AI FF D T
Sbjct: 230 IFYRVF---ARDLVIWNTLIAGYAQNGYSDDAI----------DAFFNMQGEGYEPDAVT 276
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+ + ACA S G ++H+L+ G + + +V L+ MY+ G L A VF+ +
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS 336
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
RS N I+ L G + +AL +F
Sbjct: 337 VRSVACCNSMISCLAIHG-------------------------------KGKEALEMFST 365
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI-DIRITNALIDLYAK 316
M +D ++P E+T + + A + G+ L + + ++E + +V +++ LI L +
Sbjct: 366 MESLD-LKPDEITFIAVLTACVHGGF--LMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGR 422
Query: 317 CGCIESASRFFQEI 330
G ++ A R +E+
Sbjct: 423 SGKLKEAYRLVKEM 436
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 197/388 (50%), Gaps = 53/388 (13%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D L QA T+ G +H +++ G +V V+T L+ MY+
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA------------ 263
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G +E+A VF RM ++ VSW +I + + KA
Sbjct: 264 -------------------KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA-- 302
Query: 254 LFRKMVEVD--GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
F +VE+ G +P VTL+ + A + +G +K + VH Y KR +V+D AL+
Sbjct: 303 -FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR--HVLDRVTATALM 359
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
D+Y+KCG + S+ F+ + RK+LV WN++IS + ++G +E V F M ++ + P+
Sbjct: 360 DMYSKCGALSSSREIFEHVG--RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD 417
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA---- 427
H F S+LSA SH GLVE+G +F+ M+N +I P +HY C++D+L RAGR+EEA
Sbjct: 418 HATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMI 477
Query: 428 --EKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
EK+ +P IW LL C H N+ +G KIL++ G L+SN F
Sbjct: 478 NSEKLDNALP-------IWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 486 VGVGRYKDAERLREVIDERIAIKIPGYS 513
++K+ ++R+++ K+PGYS
Sbjct: 531 ATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 19/271 (7%)
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
+N +K G+++ A +F +M R V+ WT ++ + + + +KA+ +R+M + +G
Sbjct: 158 LNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM-QNEGFGRD 216
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
V +L + A +LG K+ +SVHGY + G +++ + +L+D+YAK G IE ASR F
Sbjct: 217 RVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLP-MNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGL 387
+ K VSW SLISGFA NG+A +A E M+ G +P+ V + VL ACS G
Sbjct: 276 SRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 388 VEEGLKFFNKMVNDCQI----VPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
++ G ++V+ C I V D ++DM + G L + ++ V + + V
Sbjct: 334 LKTG-----RLVH-CYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRK--DLVC 385
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILEIEKGH 474
W T++ +H N GQ V L++ + +
Sbjct: 386 WNTMISCYGIHGN---GQEVVSLFLKMTESN 413
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL-LT 273
GE+ A VFD + R V + +I Y+R P + L L+ +M+ + I+P T +T
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI-AEKIQPDSSTFTMT 122
Query: 274 IFPAIANL----GYIKLCQSVH-GYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
I ++ L G C++V GY D+ + +++++LY KCG ++ A F
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKN-------DVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 329 EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
++ +++++ W ++++GFA G + +AVE + M+ G + V L +L A G
Sbjct: 176 KMA--KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT 233
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
+ G + + + + ++ +VDM + G +E A +V ++ + A V W +L+
Sbjct: 234 KMG-RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTA--VSWGSLI 290
Query: 449 GACSVHNNVEIGQRVTEKILEIEK-GHGGDYVLMSNIFVG 487
+ + + + E ++E++ G D V + + V
Sbjct: 291 SGFAQNG---LANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 195/381 (51%), Gaps = 38/381 (9%)
Query: 137 TFAFLSQACAYSNCT--RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
+LS +SN +Q+H+ + + GF V L+ MY G ++ A +VFD
Sbjct: 237 NLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD 296
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
+ T N+F+N T ++DAY + +AL L
Sbjct: 297 D-----THAQNIFLN--------------------------TTIMDAYFQDKSFEEALNL 325
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
F KM + + P E T + +IA L +K +HG K G+ + + NAL+++Y
Sbjct: 326 FSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN-HVMVGNALVNMY 383
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
AK G IE A + F + +++V+WN++ISG + +G+ REA+E F+ M G PN +
Sbjct: 384 AKSGSIEDARKAFSGMT--FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRIT 441
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
F+ VL ACSH G VE+GL +FN+++ + PDI+HY C+V +L +AG ++AE
Sbjct: 442 FIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTA 501
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDA 494
P E + V WRTLL AC V N +G++V E +E G YVL+SNI ++
Sbjct: 502 PIE-WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGV 560
Query: 495 ERLREVIDERIAIKIPGYSLL 515
++R +++ R K PG S +
Sbjct: 561 AKVRSLMNNRGVKKEPGVSWI 581
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 38/352 (10%)
Query: 103 CYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVF 162
C + + + F + L S F S + F + ++C+ S G Q H
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFL 163
Query: 163 KVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALS 222
K G H +V+ L+ MYS+ EA +V D++P+ ++ ++G ++ G + L
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
V + + V W +T L+ +NL
Sbjct: 224 VLRKTANEDFV-W-------------------------------NNLTYLSSLRLFSNLR 251
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
+ L VH + GFN ++ ALI++Y KCG + A R F + +N+ +
Sbjct: 252 DLNLALQVHSRMVRFGFNA-EVEACGALINMYGKCGKVLYAQRVFDDTH--AQNIFLNTT 308
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
++ + + EA+ F M+ + PN F +L++ + L+++G + +V
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKS 367
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ +V+M ++G +E+A K + + V W T++ CS H
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR--DIVTWNTMISGCSHH 417
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 130 YSSLDT-------FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSI 182
+S +DT +TFA L + A + + G LH LV K G++ HV V L+ MY+
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 183 GGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAY 242
G + +A + F M R VTWN I+G G AL FDRM
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM--------------- 430
Query: 243 TRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE-KRGFNV 301
+F G P +T + + A +++G+++ Q +H + + + F+V
Sbjct: 431 -----------IF------TGEIPNRITFIGVLQACSHIGFVE--QGLHYFNQLMKKFDV 471
Query: 302 I-DIRITNALIDLYAKCGCIESASRFFQEIP-DWRKNLVSWNSLISG 346
DI+ ++ L +K G + A F + P +W ++V+W +L++
Sbjct: 472 QPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW--DVVAWRTLLNA 516
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 4/226 (1%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N IN VK E A +FD M +R+VVSW ++ Y + L LF+ M
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P E +F + +N G I+ + HG K G + + N L+ +Y+ C A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAI 191
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
R ++P +L ++S +SG+ G +E ++ N++ +LS L S+
Sbjct: 192 RVLDDLP--YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ L+ ++MV ++ G +++M G+ G++ A++V
Sbjct: 250 LRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGKCGKVLYAQRV 294
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 204/392 (52%), Gaps = 48/392 (12%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D T L A + G Q HA + + G QF + + L+ MYS GL+ + ++
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKL 475
Query: 193 FDEMPH--RSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
F+ + R TWN I+G YT+ K
Sbjct: 476 FEGSGYAERDQATWNSMISG-------------------------------YTQNGHTEK 504
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
+FRKM+E I P VT+ +I PA + +G + L + +HG++ ++ + ++ + +AL
Sbjct: 505 TFLVFRKMLE-QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ-NVFVASAL 562
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D+Y+K G I+ A F + + +N V++ ++I G+ +GM A+ F +M+++G++P
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKE--RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ + F++VLSACS+ GL++EGLK F +M I P HY C+ DMLGR GR+ EA +
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEF 680
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGH--GGDYVLMSNIFVGV 488
+ E +W +LLG+C +H +E+ + V+E++ + +KG G VL+SN++
Sbjct: 681 VKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEE 740
Query: 489 GRYKDAERLREVIDE--------RIAIKIPGY 512
++K +++R + E R I+I GY
Sbjct: 741 QKWKSVDKVRRGMREKGLKKEVGRSGIEIAGY 772
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 29/310 (9%)
Query: 163 KVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALS 222
++G QFH +V ++ F E+P V N + + G V +
Sbjct: 335 ELGRQFHGFV-----------------SKNFRELP---IVIVNSLMVMYSRCGSVHKSFG 374
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
VF MR+R VVSW +I A+ + + L L +M + G + +T+ + A +NL
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGFKIDYITVTALLSAASNLR 433
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNS 342
++ + H + ++G + + LID+Y+K G I + + F+ ++ +WNS
Sbjct: 434 NKEIGKQTHAFLIRQGIQFEGM--NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
+ISG+ NG + F M + +RPN V S+L ACS G V+ G + +
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ- 550
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQR 462
+ ++ +VDM +AG ++ AE + Q N V + T++ H +G+R
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER--NSVTYTTMILGYGQHG---MGER 605
Query: 463 VTEKILEIEK 472
L +++
Sbjct: 606 AISLFLSMQE 615
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 130/266 (48%), Gaps = 27/266 (10%)
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G++E + VFD +R++ W +I Y + + ++++ LF + + I EVT L
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A++ L ++L + HG+ K F + I I N+L+ +Y++CG + + F + +
Sbjct: 325 ASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-- 381
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS----------- 383
+++VSWN++IS F NG+ E + M+K G + +++ ++LSA S
Sbjct: 382 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT 441
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
H L+ +G++F + Y ++DM ++G + ++K+ + +
Sbjct: 442 HAFLIRQGIQF-----------EGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQAT 488
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILE 469
W +++ + + + E V K+LE
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 53/368 (14%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+ +L+N II + + PH+A+ F + ++ F ++ D +T++ +ACA + +
Sbjct: 69 TTVLWNTIIIGFICNNLPHEALLF-YSRMKKTAPF---TNCDAYTYSSTLKACAETKNLK 124
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA-------QVFDEMPHRSTVTWN 205
G +H + + V L+ MY + L +VFD M ++ V WN
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMY-VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWN 183
Query: 206 VFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIE 265
I SW Y + + +A F M+ ++ ++
Sbjct: 184 TLI-------------------------SW------YVKTGRNAEACRQFGIMMRME-VK 211
Query: 266 PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN-VIDIRITNALIDLYAKCGCIESAS 324
P+ V+ + +FPA++ IK +G K G V D+ + ++ I +YA+ G IES+
Sbjct: 212 PSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSR 271
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENF-ENMEKAGLRPNHVAFLSVLSACS 383
R F + +N+ WN++I + N E++E F E + + + V +L SA S
Sbjct: 272 RVFDSCVE--RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
VE G +F + + + +P + +V M R G + ++ V L + DV+
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRER---DVV 385
Query: 444 -WRTLLGA 450
W T++ A
Sbjct: 386 SWNTMISA 393
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEV-TLLT 273
G +LA +FD + + V W +I + N P +AL + +M + + T +
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC----GCIES--ASRFF 327
A A +K ++VH + + N + + N+L+++Y C C E + F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGL 387
+ RKN+V+WN+LIS + G EA F M + ++P+ V+F++V A S
Sbjct: 172 DNMR--RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 388 VEEGLKFFNKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRT 446
+++ F+ M+ + V D+ + M G +E + +V N +W T
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVER--NIEVWNT 287
Query: 447 LLG 449
++G
Sbjct: 288 MIG 290
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 234/467 (50%), Gaps = 70/467 (14%)
Query: 72 QVHSHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFP---HQAIHFSIHTLNHSSTF- 127
Q+H ++ SGL P L+ NN+I YS S P +A S + + +
Sbjct: 36 QLHGYVVKSGLSLIP--------LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSI 87
Query: 128 ---FTYSSLDTFTFAFL------------------SQACAYSNCTRFGIQLHALVFKVGF 166
F + L + FL +++CA + G +H L K G+
Sbjct: 88 ISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY 147
Query: 167 QFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDR 226
V+V + L+ MY+ K GE+ A +FD
Sbjct: 148 DADVFVGSSLVDMYA-------------------------------KCGEIVYARKMFDE 176
Query: 227 MRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
M R+VV+W+ ++ Y +M + +AL LF++ + + + + + ++ AN ++L
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL-FENLAVNDYSFSSVISVCANSTLLEL 235
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ +HG + K F+ + ++L+ LY+KCG E A + F E+P KNL WN+++
Sbjct: 236 GRQIHGLSIKSSFDSS-SFVGSSLVSLYSKCGVPEGAYQVFNEVP--VKNLGIWNAMLKA 292
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP 406
+A + ++ +E F+ M+ +G++PN + FL+VL+ACSH GLV+EG +F++M + +I P
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEP 351
Query: 407 DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEK 466
+HY +VDMLGRAGRL+EA +V +P + + +W LL +C+VH N E+ +K
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPID-PTESVWGALLTSCTVHKNTELAAFAADK 410
Query: 467 ILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ E+ G ++ +SN + GR++DA + R+++ +R K G S
Sbjct: 411 VFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLS 457
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 203/404 (50%), Gaps = 54/404 (13%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
LD F L +A FG +H LV K ++ ++ + L+ MYS G + A +V
Sbjct: 115 LDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKV 174
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSV----------------------FDRMRDR 230
F ++ + V +N I+G + + AL++ F MR+
Sbjct: 175 FSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNE 234
Query: 231 -----------------SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
VVSWT +I Q KA F++M+ G+ P T++T
Sbjct: 235 EKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML-THGLYPNSATIIT 293
Query: 274 IFPAIANLGYIKLCQSVHGYA-----EKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
+ PA L Y+K + +HGY+ E GF + +AL+D+Y KCG I A F+
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGF------VRSALLDMYGKCGFISEAMILFR 347
Query: 329 EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
+ P +K V++NS+I +A +G+A +AVE F+ ME G + +H+ F ++L+ACSH GL
Sbjct: 348 KTP--KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLT 405
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
+ G F M N +IVP + HY C+VD+LGRAG+L EA ++ + E + +W LL
Sbjct: 406 DLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME-PDLFVWGALL 464
Query: 449 GACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYK 492
AC H N+E+ + + + E+E + G+ +L+++++ G ++
Sbjct: 465 AACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWE 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
V+ G+V A VFD M R + ++I A R ++L FR+M + DG++ +
Sbjct: 62 VECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYK-DGLKLDAFIV 120
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
++ A NL + + +H K + D I ++LID+Y+K G + +A + F ++
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYES-DAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+ ++LV +N++ISG+A N A EA+ ++M+ G++P+ + + +++S SH
Sbjct: 180 E--QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 99/266 (37%), Gaps = 50/266 (18%)
Query: 118 IHTLNHSSTFFTYSSL-------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHV 170
+H + F + + ++ T L AC + G ++H G + H
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 171 YVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR 230
+V++ LL MY G + EA +F + P ++TVT+N I G + A+ +FD+M
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM--- 380
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
E G + +T I A ++ G L Q++
Sbjct: 381 -----------------------------EATGEKLDHLTFTAILTACSHAGLTDLGQNL 411
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMN 350
+ + V + ++DL + G + A + + +L W +L++
Sbjct: 412 FLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR-MEPDLFVWGALLA----- 465
Query: 351 GMAREAVENFENMEKAGLRPNHVAFL 376
A N NME A + H+A L
Sbjct: 466 -----ACRNHGNMELARIAAKHLAEL 486
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 182/363 (50%), Gaps = 38/363 (10%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G +H L K G + V L+ MY G K
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMY-----------------------------GKSK 311
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
W +E A S+F+ M +R + +W V+ + LALF +M+ GI P VTL T
Sbjct: 312 W--LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML-CSGIRPDIVTLTT 368
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGF---NVIDIRITNALIDLYAKCGCIESASRFFQEI 330
+ P L ++ + +HGY G + I N+L+D+Y KCG + A F +
Sbjct: 369 VLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSM 428
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
K+ SWN +I+G+ + A++ F M +AG++P+ + F+ +L ACSH G + E
Sbjct: 429 R--VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNE 486
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
G F +M I+P HY CV+DMLGRA +LEEA ++A+ P N V+WR++L +
Sbjct: 487 GRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI-CDNPVVWRSILSS 545
Query: 451 CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIP 510
C +H N ++ +++ E+E H G YVLMSN++V G+Y++ +R+ + ++ K P
Sbjct: 546 CRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTP 605
Query: 511 GYS 513
G S
Sbjct: 606 GCS 608
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 38/289 (13%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGF-QFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST 201
Q CA G Q+H + + GF T L+ MY+ GL+ A VF R
Sbjct: 68 QRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDV 126
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV 261
+N I+G V G P+ A+ +R+M
Sbjct: 127 FGYNALISGFVVNG-------------------------------SPLDAMETYREM-RA 154
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
+GI P + T ++ ++ + + VHG A K GF+ D + + L+ Y+K +E
Sbjct: 155 NGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDS-DCYVGSGLVTSYSKFMSVE 212
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A + F E+PD R + V WN+L++G++ +A+ F M + G+ + SVLSA
Sbjct: 213 DAQKVFDELPD-RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSA 271
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ G ++ G V DI ++DM G++ LEEA +
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGS-GSDIVVSNALIDMYGKSKWLEEANSI 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
Q +HG+ ++GF R +L+++YAKCG + A F +++ +N+LISGF
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG---GSERDVFGYNALISGF 136
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE----EGLKFFNKMVNDCQ 403
+NG +A+E + M G+ P+ F S+L L + GL F +DC
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCY 196
Query: 404 IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ + V + +E+A+KV ++P + + V+W L+ S
Sbjct: 197 VGSGL------VTSYSKFMSVEDAQKVFDELP-DRDDSVLWNALVNGYS 238
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 192/382 (50%), Gaps = 38/382 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
++ TF AC+ G+QLH LV + GF V V GL+ Y
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG------------ 255
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K ++ + +F M ++ VSW ++ AY + ++ KA
Sbjct: 256 -------------------KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
L+ + + D +E ++ + ++ A A + ++L +S+H +A K I + +AL+D+
Sbjct: 297 LYLRSRK-DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT-IFVGSALVDM 354
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL--RPN 371
Y KCGCIE + + F E+P+ KNLV+ NSLI G+A G A+ FE M G PN
Sbjct: 355 YGKCGCIEDSEQAFDEMPE--KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPN 412
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
++ F+S+LSACS G VE G+K F+ M + I P HY C+VDMLGRAG +E A +
Sbjct: 413 YMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI 472
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
++P + V W L AC +H ++G E + +++ G++VL+SN F GR+
Sbjct: 473 KKMPIQPTISV-WGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRW 531
Query: 492 KDAERLREVIDERIAIKIPGYS 513
+A +RE + K GYS
Sbjct: 532 AEANTVREELKGVGIKKGAGYS 553
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 155/369 (42%), Gaps = 38/369 (10%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF +A A G Q+HAL K G V+V MY L +A ++F
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
DE+P R+ TWN FI+ V G +P +A+
Sbjct: 167 DEIPERNLETWNAFISNSVTDG-------------------------------RPREAIE 195
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
F + +DG P +T A ++ ++ L +HG + GF+ D+ + N LID
Sbjct: 196 AFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT-DVSVCNGLIDF 253
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KC I S+ F E+ KN VSW SL++ + N +A + K + +
Sbjct: 254 YGKCKQIRSSEIIFTEMGT--KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
SVLSAC+ +E G V C + I +VDM G+ G +E++E+ +
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P + N V +L+G + V++ + E++ G +Y+ ++ R
Sbjct: 371 MPEK--NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 494 AERLREVID 502
E ++ D
Sbjct: 429 VENGMKIFD 437
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 7/246 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N IN K E A V R+VVSWT +I + AL F +M +G+
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR-EGV 104
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P + T F A+A+L + +H A K G ++D+ + + D+Y K + A
Sbjct: 105 VPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG-RILDVFVGCSAFDMYCKTRLRDDAR 163
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
+ F EIP+ +NL +WN+ IS +G REA+E F + PN + F + L+ACS
Sbjct: 164 KLFDEIPE--RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
+ G++ + +V D+ ++D G+ ++ +E + ++ N V W
Sbjct: 222 WLHLNLGMQ-LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG--TKNAVSW 278
Query: 445 RTLLGA 450
+L+ A
Sbjct: 279 CSLVAA 284
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 190/375 (50%), Gaps = 35/375 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D+F F+ + +ACA G Q+HA V K+G + V V T L+ Y
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY------------- 330
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+K E A F +R+ + VSW+ +I Y +M+Q +A+
Sbjct: 331 ------------------IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK 372
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
F+ + + T +IF A + L + VH A KR + +ALI +
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL-IGSQYGESALITM 431
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+KCGC++ A+ F+ + + ++V+W + ISG A G A EA+ FE M G++PN V
Sbjct: 432 YSKCGCLDDANEVFESMDN--PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 489
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F++VL+ACSH GLVE+G + M+ + P I HY C++D+ R+G L+EA K
Sbjct: 490 TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKN 549
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P E + + W+ L C H N+E+G+ E++ +++ YVL N++ G++++
Sbjct: 550 MPFE-PDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEE 608
Query: 494 AERLREVIDERIAIK 508
A + ++++ER+ K
Sbjct: 609 AAEMMKLMNERMLKK 623
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
S L++FT+ + QAC+ G Q+HA K Y ++ L+ MYS G L +A
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
+VF+ M + V W FI+G +G +
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNAS-------------------------------E 471
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEK-RGFNVI-DIRITN 308
AL LF KMV G++P VT + + A ++ G ++ Q H R +NV I +
Sbjct: 472 ALRLFEKMVSC-GMKPNSVTFIAVLTACSHAGLVE--QGKHCLDTMLRKYNVAPTIDHYD 528
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ID+YA+ G ++ A +F + +P + + +SW +SG
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMP-FEPDAMSWKCFLSG 565
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 153/361 (42%), Gaps = 42/361 (11%)
Query: 177 LQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWT 236
L+ S G LL + ++ E P S + N + + +E A +FD M + + VS T
Sbjct: 96 LRSLSHGRLLHDRMRMGIENP--SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRT 153
Query: 237 LVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEK 296
+I AY KA+ LF M+ G +P T+ ++ N + + +H + +
Sbjct: 154 TMISAYAEQGILDKAVGLFSGML-ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIR 212
Query: 297 RGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREA 356
G + I ++++Y KCG + A R F ++ K V+ L+ G+ G AR+A
Sbjct: 213 AGL-CSNTSIETGIVNMYVKCGWLVGAKRVFDQMA--VKKPVACTGLMVGYTQAGRARDA 269
Query: 357 VENFENMEKAGLRPNHVAFLSVLSACS-----------HGGLVEEGLK-----------F 394
++ F ++ G+ + F VL AC+ H + + GL+ F
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF 329
Query: 395 FNKMV---NDCQIVPDIRH-----YGCVVDMLGRAGRLEEAEKVALQVPHEVA---NDVI 443
+ K + C+ +IR + ++ + + EEA K + + A N
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFT 389
Query: 444 WRTLLGACSVHNNVEIGQRVTEKILE--IEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
+ ++ ACSV + IG +V ++ + G+ L++ ++ G DA + E +
Sbjct: 390 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT-MYSKCGCLDDANEVFESM 448
Query: 502 D 502
D
Sbjct: 449 D 449
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 205/374 (54%), Gaps = 7/374 (1%)
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
QAC S+ FG+++H + + Q + + ++ Y+ G L A +FDEM + +V
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
T+ I+G + G V+ A+++F M + +W +I + N + + FR+M+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRC- 360
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
G P VTL ++ P++ +K + +H +A + G + +I +T ++ID YAK G +
Sbjct: 361 GSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN-NIYVTTSIIDNYAKLGFLLG 419
Query: 323 ASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
A R F D ++L++W ++I+ +A++G + A F+ M+ G +P+ V +VLSA
Sbjct: 420 AQRVFDNCKD--RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAF 477
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
+H G + F+ M+ I P + HY C+V +L RAG+L +A + ++P + V
Sbjct: 478 AHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKV 537
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVID 502
W LL SV ++EI + +++ E+E + G+Y +M+N++ GR+++AE +R +
Sbjct: 538 -WGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKM- 595
Query: 503 ERIAI-KIPGYSLL 515
+RI + KIPG S +
Sbjct: 596 KRIGLKKIPGTSWI 609
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 56/330 (16%)
Query: 146 AYSNCTRFGI-----QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS 200
A S C F + Q+H V + GF V+V G++ Y+ + A +VFDEM R
Sbjct: 138 ALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD 197
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
V+WN I+G + G E +++ M+
Sbjct: 198 VVSWNSMISGYSQSGSFE-------------------------------DCKKMYKAMLA 226
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
+P VT++++F A + VH + +D+ + NA+I YAKCG +
Sbjct: 227 CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQ-MDLSLCNAVIGFYAKCGSL 285
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ A F E+ + K+ V++ ++ISG+ +G+ +EA+ F ME GL + ++
Sbjct: 286 DYARALFDEMSE--KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV-ALQVPHEVA 439
H EE + F +M+ C P+ ++ L + L+ +++ A + +
Sbjct: 344 NNHH----EEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 440 NDVIWRT-----------LLGACSVHNNVE 458
N++ T LLGA V +N +
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV-----EVDGIEPTEVTLLTI 274
AL VFD + R+ S+ ++ AYT A +LF + D P +++ +
Sbjct: 76 ALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCV 135
Query: 275 FPAIAN-----LGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
A++ LG L + VHG+ + GF+ D+ + N +I Y KC IESA + F E
Sbjct: 136 LKALSGCDDFWLG--SLARQVHGFVIRGGFDS-DVFVGNGMITYYTKCDNIESARKVFDE 192
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL-----RPNHVAFLSVLSACSH 384
+ + +++VSWNS+ISG++ +G + E+ + M KA L +PN V +SV AC
Sbjct: 193 MSE--RDVVSWNSMISGYSQSG----SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ GL+ KM+ + I D+ V+ + G L+ A
Sbjct: 247 SSDLIFGLEVHKKMIEN-HIQMDLSLCNAVIGFYAKCGSLDYA 288
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+T T + L + YS+ + G ++HA + G ++YV T ++ Y+ G L+ A +VF
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPM 249
D RS + W I G+ + A S+FD+M+ V+ T V+ A+
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 250 KALALFRKMVEVDGIEP 266
A +F M+ IEP
Sbjct: 485 MAQHIFDSMLTKYDIEP 501
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 196/379 (51%), Gaps = 38/379 (10%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
F+ + +AC R G +HA + K + V LL++Y GL +A +VFD
Sbjct: 237 FSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDG 296
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV-VSWTLVIDAYTRMNQPMKALAL 254
M R+ VTWN I+ L K V ++F +M++ + SW
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA------------------ 338
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
TL TI PA + + + + +H K D+ + N+L+D+Y
Sbjct: 339 ---------------TLTTILPACSRVAALLTGKEIHAQILKSK-EKPDVPLLNSLMDMY 382
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
KCG +E + R F + K+L SWN +++ +A+NG E + FE M ++G+ P+ +
Sbjct: 383 GKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
F+++LS CS GL E GL F +M + ++ P + HY C+VD+LGRAG+++EA KV +
Sbjct: 441 FVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETM 500
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDA 494
P + + IW +LL +C +H NV +G+ +++ +E + G+YV++SNI+ + +
Sbjct: 501 PFKPSAS-IWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNV 559
Query: 495 ERLREVIDERIAIKIPGYS 513
+++RE++ +R K G S
Sbjct: 560 DKIREMMKQRGVKKEAGCS 578
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 170/311 (54%), Gaps = 9/311 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+ +N K G ++LA V+DR+ + VS + +I Y++ LFR MV + G
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV-MSGF 648
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+ +I A A L VH Y K G + + ++L+ +Y+K G I+
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGL-CTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 325 RFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
+ F +I PD L++W +LI+ +A +G A EA++ + M++ G +P+ V F+ VLSAC
Sbjct: 708 KAFSQINGPD----LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
SHGGLVEE N MV D I P+ RHY C+VD LGR+GRL EAE + H + +
Sbjct: 764 SHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESF-INNMHIKPDAL 822
Query: 443 IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVID 502
+W TLL AC +H VE+G+ +K +E+E G Y+ +SNI VG + + E R+++
Sbjct: 823 VWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMK 882
Query: 503 ERIAIKIPGYS 513
K PG+S
Sbjct: 883 GTGVQKEPGWS 893
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 47/318 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D++T++ + ACA RFG + A V K G + V+V T ++ +Y+
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYA------------ 296
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G + A+ VF R+ + SVVSWT+++ YT+ N AL
Sbjct: 297 -------------------KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+F++M G+E T+ ++ A + VH + K GF +D + ALI +
Sbjct: 338 IFKEMRH-SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF-YLDSSVAAALISM 395
Query: 314 YAKCGCIESASRFFQEIPD-WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
Y+K G I+ + + F+++ D R+N+V N +I+ F+ + +A+ F M + GLR +
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE 453
Query: 373 VAFLSVLSA--CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ S+LS C + G G + +V D + + + + G LEE+ K+
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL------FTLYSKCGSLEESYKL 507
Query: 431 ALQVPHEVANDVIWRTLL 448
+P + ++ W +++
Sbjct: 508 FQGIPFK--DNACWASMI 523
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 177/437 (40%), Gaps = 84/437 (19%)
Query: 96 LFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGI 155
+ N +I +S S P +AI L L T F+ S +C G
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEG--------LRTDEFSVCSLLSVL-DCLNLGK 470
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
Q+H K G + V + L +YS G L E+ ++F +P + W I+G ++G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
+ A+ +F M D DG P E TL +
Sbjct: 531 YLREAIGLFSEMLD--------------------------------DGTSPDESTLAAVL 558
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
++ + + +HGY + G + + + +AL+++Y+KCG ++ A + + +P+
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDK-GMDLGSALVNMYSKCGSLKLARQVYDRLPEL-- 615
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA-------------- 381
+ VS +SLISG++ +G+ ++ F +M +G + A S+L A
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 382 --------CSHGGLVEEGLKFFNKM--VNDC-----QI-VPDIRHYGCVVDMLGRAGRLE 425
C+ + L ++K ++DC QI PD+ + ++ + G+
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 426 EAEKV--ALQVPHEVANDVIWRTLLGACSVHNNVE-----IGQRVTEKILEIEKGHGGDY 478
EA +V ++ + V + +L ACS VE + V + +E E H Y
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRH---Y 792
Query: 479 VLMSNIFVGVGRYKDAE 495
V M + GR ++AE
Sbjct: 793 VCMVDALGRSGRLREAE 809
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 43/271 (15%)
Query: 163 KVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK---WGEVEL 219
K+G+ F+ V++ L+ ++S +A +VF + + WN I G ++ +G
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG---- 233
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
+VFD LF +M V +P T ++ A A
Sbjct: 234 --AVFD----------------------------LFHEMC-VGFQKPDSYTYSSVLAACA 262
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
+L ++ + V K G D+ + A++DLYAKCG + A F IP+ ++VS
Sbjct: 263 SLEKLRFGKVVQARVIKCGAE--DVFVCTAIVDLYAKCGHMAEAMEVFSRIPN--PSVVS 318
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
W ++SG+ + A A+E F+ M +G+ N+ SV+SAC +V E + + V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ-VHAWV 377
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
D ++ M ++G ++ +E+V
Sbjct: 378 FKSGFYLDSSVAAALISMYSKSGDIDLSEQV 408
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 39/289 (13%)
Query: 168 FHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM 227
F V++ LL YS G + +AA++FD +P
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPD--------------------------- 114
Query: 228 RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
VVS ++I Y + ++L F KM G E E++ ++ A + L
Sbjct: 115 ----VVSCNIMISGYKQHRLFEESLRFFSKM-HFLGFEANEISYGSVISACSALQAPLFS 169
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
+ V + K G+ ++ + +ALID+++K E A + F++ N+ WN++I+G
Sbjct: 170 ELVCCHTIKMGYFFYEV-VESALIDVFSKNLRFEDAYKVFRD--SLSANVYCWNTIIAGA 226
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
N + F M +P+ + SVL+AC+ + G K V C D
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG-KVVQARVIKCG-AED 284
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
+ +VD+ + G + EA +V ++P+ V W +L + N+
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV--VSWTVMLSGYTKSND 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
++D+F + + +A A S+ + G Q+HA + K+G V + LL MYS G + + +
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQ 247
F ++ + W I + G+ AL V++ M+++ V++ V+ A +
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQS 289
++ MV+ GIEP + + A+ G ++ +S
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAES 810
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 178/314 (56%), Gaps = 6/314 (1%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD-G 263
N I+ K G++E A +F+R ++++SW +I + P + L F ++E +
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
I P TL T+ + + L H Y + G + I NALI++Y++CG I+++
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG-QFKETLIGNALINMYSQCGTIQNS 543
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG-LRPNHVAFLSVLSAC 382
F ++ + K++VSWNSLIS ++ +G AV ++ M+ G + P+ F +VLSAC
Sbjct: 544 LEVFNQMSE--KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
SH GLVEEGL+ FN MV ++ ++ H+ C+VD+LGRAG L+EAE + + + V
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 443 -IWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
+W L AC+ H ++++G+ V + ++E EK YV +SNI+ G G +K+AE R I
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Query: 502 DERIAIKIPGYSLL 515
+ A+K G S +
Sbjct: 722 NMIGAMKQRGCSWM 735
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+L LF ++ RC +L P ++ +I T H T
Sbjct: 40 ALKLFADVHRCTTLRP-DQYSVSLAITTARHLRD------------------------TI 74
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
FG Q+H + G H +V LL +Y G L + FDE+ +W ++
Sbjct: 75 FGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASF 134
Query: 213 KWGEVELALSVFDRMRDRSVVS-WTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
K G++E A VFD+M +R V+ W +I ++ LFR+M ++ G+ +
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGF 193
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
TI ++ + G + + VH K GF I + NALI +Y C + A F+E
Sbjct: 194 ATIL-SMCDYGSLDFGKQVHSLVIKAGF-FIASSVVNALITMYFNCQVVVDACLVFEETD 251
Query: 332 DWRKNLVSWNSLISGFAMNGMAR-EAVENFENMEKAGLRPNHVAFLSVLSACS 383
++ V++N +I G A G R E++ F M +A LRP + F+SV+ +CS
Sbjct: 252 VAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 169/423 (39%), Gaps = 100/423 (23%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
TF + +C+ C G Q+H L K G++ + V + MYS
Sbjct: 292 LTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS-------------- 334
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
+ + A VF+ + ++ +V+W +I +Y + A++++
Sbjct: 335 -----------------SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV---HGYAEKRGFNVIDIRITNALID 312
++M + G++P E T ++ +L +++ Q+ G + K I I+NALI
Sbjct: 378 KRM-HIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSK-------IEISNALIS 429
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR--P 370
Y+K G IE A F+ RKNL+SWN++ISGF NG E +E F + ++ +R P
Sbjct: 430 AYSKNGQIEKADLLFER--SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 371 NHVAFLSVLSAC-----------------------------------SHGGLVEEGLKFF 395
+ ++LS C S G ++ L+ F
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE---VANDVIWRTLLGACS 452
N+M D+ + ++ R G E A + E + + + +L ACS
Sbjct: 548 NQMSE-----KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
Query: 453 VHNNVEIGQRVTEKILEIEKGHG-----GDYVLMSNIFVGVGRYKDAERLREVIDERIAI 507
VE G + ++E HG + + ++ G +AE L ++ ++ I
Sbjct: 603 HAGLVEEGLEIFNSMVEF---HGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGS 659
Query: 508 KIP 510
++
Sbjct: 660 RVD 662
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D +T + L C ++ G Q HA V + G + L+ MYS G + + +VF
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV-----SWTLVIDAYTRMNQP 248
++M + V+WN I+ + GE E A++ + M+D V +++ V+ A +
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 249 MKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI 304
+ L +F MVE G+ + + G++ +S+ +EK + +D+
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDV 663
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 169/295 (57%), Gaps = 7/295 (2%)
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
VF+ ++ +V+W +I +++ +AL LF +M + + P VT+ ++F A A+LG
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLG 457
Query: 283 YIKLCQSVHGYAEKRGF-NVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN 341
+ + S+H Y+ K GF + + AL+D YAKCG +SA F I + KN ++W+
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE--KNTITWS 515
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND 401
++I G+ G ++E FE M K +PN F S+LSAC H G+V EG K+F+ M D
Sbjct: 516 AMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD 575
Query: 402 CQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV-IWRTLLGACSVHNNVEIG 460
P +HY C+VDML RAG LE+A + ++P + DV + L C +H+ ++G
Sbjct: 576 YNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP--IQPDVRCFGAFLHGCGMHSRFDLG 633
Query: 461 QRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ V +K+L++ YVL+SN++ GR+ A+ +R ++ +R KI G+S +
Sbjct: 634 EIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 170/425 (40%), Gaps = 83/425 (19%)
Query: 96 LFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGI 155
L+ ++RCY L+ + + + H F Y D F+ +AC G
Sbjct: 109 LWKVMLRCYCLNKESVEVVKLYDLLMKHG---FRY---DDIVFSKALKACTELQDLDNGK 162
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
++H + KV F V TGLL MY+ G + A +VF+++ R+ V W I G VK
Sbjct: 163 KIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 216 EVELALSVFDRMRDRSVVS----------------------W-----------------T 236
E L +F+RMR+ +V+ W T
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 237 LVIDAYTRMNQPMKALALFRKMVEVD----------------------------GIE--P 266
++D Y + A +F + VD G+E P
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
VT+ ++ + ++L +SVHG + K G + D + NAL+ +YAKC A
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVG--IWDTNVANALVHMYAKCYQNRDAKYV 399
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F+ + K++V+WNS+ISGF+ NG EA+ F M + PN V S+ SAC+ G
Sbjct: 400 FE--MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYG-CVVDMLGRAGRLEEAEKVALQVPHEVANDVIWR 445
+ G V + H G ++D + G + A + + E N + W
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI--EEKNTITWS 515
Query: 446 TLLGA 450
++G
Sbjct: 516 AMIGG 520
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 40/244 (16%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
+ ++ +N+II +S + H+A+ F H +N S + + T A L ACA
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEAL-FLFHRMNSESV-----TPNGVTVASLFSACASLG 457
Query: 150 CTRFGIQLHALVFKVGF--QFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVF 207
G LHA K+GF V+V T LL Y+ G A +FD + ++T+TW+
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
I G K G+ +L +F+ M + +P
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQ--------------------------------KPN 545
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
E T +I A + G + + K + ++D+ A+ G +E A
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 328 QEIP 331
+++P
Sbjct: 606 EKMP 609
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMN 350
HG G + DI I L+ LY G + A F +IP+ + W ++ + +N
Sbjct: 64 HGVLTGNGL-MGDISIATKLVSLYGFFGYTKDARLVFDQIPE--PDFYLWKVMLRCYCLN 120
Query: 351 GMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRH 410
+ E V+ ++ + K G R + + F L AC+ ++ G K ++V VP +
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK----VPSFDN 176
Query: 411 --YGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
++DM + G ++ A KV + + N V W +++
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDIT--LRNVVCWTSMIAG 216
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 209/380 (55%), Gaps = 34/380 (8%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT L +AC+ + G Q+H + + GF
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH-------------------------- 242
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
P +T+T ++ ++ VK G + A FD++++++++SW+ +I Y + + ++A+
Sbjct: 243 --CPSSATITGSL-VDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF+++ E++ + L +I A+ ++ + + A K + ++ + N+++D+
Sbjct: 300 LFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLP-SGLETSVLNSVVDM 357
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCG ++ A + F E+ K+++SW +I+G+ +G+ +++V F M + + P+ V
Sbjct: 358 YLKCGLVDEAEKCFAEMQ--LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
+L+VLSACSH G+++EG + F+K++ I P + HY CVVD+LGRAGRL+EA+ +
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P + N IW+TLL C VH ++E+G+ V + +L I+ + +YV+MSN++ G + +
Sbjct: 476 MPIK-PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNE 534
Query: 494 AERLREVIDERIAIKIPGYS 513
RE+ + + K G S
Sbjct: 535 QGNARELGNIKGLKKEAGMS 554
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 175/400 (43%), Gaps = 69/400 (17%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF+ +AC N G+Q+H K+GF+ V V L+ MYS G + EA +VF
Sbjct: 106 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 165
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ RS ++WN I G V G AL F M++ ++
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE------------------- 206
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNV-IDIRITNALID 312
P E TL ++ A ++ G I + +HG+ + GF+ IT +L+D
Sbjct: 207 -----------RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
LY KCG + SA + F +I + K ++SW+SLI G+A G EA+ F+ +++ + +
Sbjct: 256 LYVKCGYLFSARKAFDQIKE--KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS 313
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV-- 430
A S++ + L+ +G K + + VVDM + G ++EAEK
Sbjct: 314 FALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 431 -------------------------ALQVPHEV------ANDVIWRTLLGACSVHNNVEI 459
++++ +E+ ++V + +L ACS ++
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 460 GQRVTEKILEIE--KGHGGDYVLMSNIFVGVGRYKDAERL 497
G+ + K+LE K Y + ++ GR K+A+ L
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV 261
+T N I+ K E +A VFD M +R+VVSW+ ++ + +L+LF +M
Sbjct: 42 ITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR- 100
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
GI P E T T A L ++ +HG+ K GF ++ + + N+L+D+Y+KCG I
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM-VEVGNSLVDMYSKCGRIN 159
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL--RPNHVAFLSVL 379
A + F+ I D ++L+SWN++I+GF G +A++ F M++A + RP+ S+L
Sbjct: 160 EAEKVFRRIVD--RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 380 SACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY-GCVVDMLGRAGRLEEAEKVALQVPHEV 438
ACS G++ G + +V P G +VD+ + G L A K Q+ +
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 439 ANDVIWRTLL 448
+ W +L+
Sbjct: 278 M--ISWSSLI 285
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 270 TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE 329
L++I G VH Y K G + +++ +N LID+Y KC A + F
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
+P+ +N+VSW++L+SG +NG + ++ F M + G+ PN F + L AC +E
Sbjct: 67 MPE--RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 390 EGLKFFNKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+GL+ + +++ ++ + +VDM + GR+ EAEKV
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKV 164
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
S +D+F + + A R G Q+ AL K+ V ++ MY GL+ EA
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMN 246
+ F EM + ++W V I G K G + ++ +F M ++ V + V+ A +
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 247 QPMKALALFRKMVEVDGIEP 266
+ LF K++E GI+P
Sbjct: 429 MIKEGEELFSKLLETHGIKP 448
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 219/419 (52%), Gaps = 12/419 (2%)
Query: 80 SGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFA 139
S + +P N + S +N +I Y+ + + +A+ ++ + + D +F
Sbjct: 214 SVFWRNPELNDTIS---WNTLIAGYAQNGYEEEALKMAVSMEENGLKW------DEHSFG 264
Query: 140 FLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR 199
+ + + G ++HA V K G + +V +G++ +Y G + A
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV 259
+ + + I G G++ A +FD + ++++V WT + Y + QP L L R +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 260 EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC 319
+ P + ++++ A + Y++ + +HG++ + G ++D ++ A +D+Y+KCG
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI-LMDKKLVTAFVDMYSKCGN 443
Query: 320 IESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVL 379
+E A R F + ++ V +N++I+G A +G ++ ++FE+M + G +P+ + F+++L
Sbjct: 444 VEYAERIFD--SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALL 501
Query: 380 SACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVA 439
SAC H GLV EG K+F M+ I P+ HY C++D+ G+A RL++A ++ +
Sbjct: 502 SACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEK 561
Query: 440 NDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLR 498
+ VI L ACS + N E+ + V EK+L IE +G Y+ ++N + GR+ + +R+R
Sbjct: 562 DAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIR 620
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 38/319 (11%)
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
C + G H K G L+ +YS GLL EA VFDEM R+ +WN I
Sbjct: 3 CLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 210 GLVKWGEVELALSVFDRMR-DRSVVSWTLVIDAYTRMNQ-PMKALALFRKM--VEVDGIE 265
VK+ V+ A +F+ +R ++++ ++ + + + +A+ +F +M E D I
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 266 PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASR 325
+ T+ T+ A L + + +HG K G + ++ +LI +Y+KCG +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS-SLIHMYSKCGKFKEVCN 181
Query: 326 FFQ----EIPD------------------------WR----KNLVSWNSLISGFAMNGMA 353
F E D WR + +SWN+LI+G+A NG
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
EA++ +ME+ GL+ + +F +VL+ S ++ G + +++ + G
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG- 300
Query: 414 VVDMLGRAGRLEEAEKVAL 432
+VD+ + G ++ AE L
Sbjct: 301 IVDVYCKCGNMKYAESAHL 319
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 54/363 (14%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D FT + + A +G QLH ++ K G + + L+ MYS G E +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 193 FDE--MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRD-RSVVSWTLVIDAYTRMNQPM 249
F+ + +V N I + G+++ ALSVF R + +SW +I Y +
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+AL + M E +G++ E + + +++L +K+ + VH K G + + +++
Sbjct: 243 EALKMAVSM-EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG-SYSNKFVSSG 300
Query: 310 LIDLYAKCGCIE-------------------------------SASRFFQEIPDWRKNLV 338
++D+Y KCG ++ A R F + + KNLV
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE--KNLV 358
Query: 339 SWNSLISGF-------AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
W ++ G+ ++ +AR + N N P+ + +SVL ACS +E G
Sbjct: 359 VWTAMFLGYLNLRQPDSVLELARAFIANETNT------PDSLVMVSVLGACSLQAYMEPG 412
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
+ + I+ D + VDM + G +E AE++ E + V++ ++ C
Sbjct: 413 KEIHGHSLR-TGILMDKKLVTAFVDMYSKCGNVEYAERI-FDSSFE-RDTVMYNAMIAGC 469
Query: 452 SVH 454
+ H
Sbjct: 470 AHH 472
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 201/396 (50%), Gaps = 37/396 (9%)
Query: 123 HSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYS- 181
+ F +D FT A + A + G Q H + K GF + +V +GL+ YS
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 182 IGGL--LVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVI 239
GG + ++ +VF E+ V WN I+G S+ + + + +V S
Sbjct: 288 CGGCDGMYDSEKVFQEILSPDLVVWNTMISG----------YSMNEELSEEAVKS----- 332
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
FR+M + G P + + + + A +NL C+ +HG A K
Sbjct: 333 ---------------FRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI 376
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVEN 359
I + NALI LY K G ++ A F +P+ N VS+N +I G+A +G EA+
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPEL--NAVSFNCMIKGYAQHGHGTEALLL 434
Query: 360 FENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLG 419
++ M +G+ PN + F++VLSAC+H G V+EG ++FN M +I P+ HY C++D+LG
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 420 RAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYV 479
RAG+LEEAE+ +P++ + V W LLGAC H N+ + +R +++ ++ YV
Sbjct: 495 RAGKLEEAERFIDAMPYKPGS-VAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 480 LMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+++N++ ++++ +R+ + + K PG S +
Sbjct: 554 MLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 18/330 (5%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G LHAL K Y+ + +YS G L A F + ++NV + K
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
++ +A +FD + VS+ +I Y + A+ LF++M ++ G E TL
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL-GFEVDGFTLSG 145
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
+ A + + L + +H ++ GF+ + NA + Y+K G + A F + +
Sbjct: 146 LIAACCD--RVDLIKQLHCFSVSGGFDSYS-SVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
R VSWNS+I + + +A+ ++ M G + + SVL+A + + G +
Sbjct: 203 RDE-VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 394 FFNKMVNDCQIVPDIRHYGC-VVDMLGRAGRLE---EAEKVALQVPHEVAND-VIWRTLL 448
F K++ H G ++D + G + ++EKV ++ ++ D V+W T++
Sbjct: 262 FHGKLIK--AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI---LSPDLVVWNTMI 316
Query: 449 GACSVHNNVEIGQRVTEKILEIEK-GHGGD 477
S+ N E+ + + ++++ GH D
Sbjct: 317 SGYSM--NEELSEEAVKSFRQMQRIGHRPD 344
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 221/450 (49%), Gaps = 77/450 (17%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT+ F+ ACA G +H+ +FKVG + V++ L+ MY+ G + A ++F
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR-------DRSVVSW----------- 235
DE+ R TV+WN I+G + G + A+ +F +M +R++VS
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 236 ---------------------TLVIDAYTRMNQPMKALALFRKMVEVD------------ 262
+ +I Y + A +F +M++ D
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 263 ------------------GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI 304
G+ P TL T+ A ++G ++L + + +A + +I
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH-NI 369
Query: 305 RITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENME 364
+ L+D+Y KCG +E A R F+ +P KN +WN++I+ +A G A+EA+ F+ M
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMP--VKNEATWNAMITAYAHQGHAKEALLLFDRM- 426
Query: 365 KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRL 424
+ P+ + F+ VLSAC H GLV +G ++F++M + +VP I HY ++D+L RAG L
Sbjct: 427 --SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 425 EEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEI-EKGHGGDYVLMSN 483
+EA + + P + ++++ +LGAC +V I ++ ++E+ E + G+YV+ SN
Sbjct: 485 DEAWEFMERFPGK-PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSN 543
Query: 484 IFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ + + ++ ++R ++ +R +K PG S
Sbjct: 544 VLADMKMWDESAKMRALMRDRGVVKTPGCS 573
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 8/259 (3%)
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRM-NQPM 249
Q+ +M S N I V+ G+ + +F + + S+ +I T N
Sbjct: 55 QIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHE 114
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
AL+L+R+M + G++P + T +F A A L I + +SVH K G D+ I ++
Sbjct: 115 AALSLYRRM-KFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER-DVHINHS 172
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
LI +YAKCG + A + F EI + ++ VSWNS+ISG++ G A++A++ F ME+ G
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITE--RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
P+ +S+L ACSH G + G + +M +I ++ M G+ G L+ A +
Sbjct: 231 PDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 289
Query: 430 VALQVPHEVANDVIWRTLL 448
V Q+ + + V W ++
Sbjct: 290 VFNQMIKK--DRVAWTAMI 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 37/201 (18%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S D T + + AC G Q+ ++ Q ++YV TGL+ MY G + EA +
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
VF+ MP ++ TWN I G + AL +FDRM
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM------------------------ 426
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI-KLCQSVHGYAEKRGFNVIDIRITNAL 310
+ P+++T + + A + G + + C+ H + G V I +
Sbjct: 427 -----------SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGL-VPKIEHYTNI 474
Query: 311 IDLYAKCGCIESASRFFQEIP 331
IDL ++ G ++ A F + P
Sbjct: 475 IDLLSRAGMLDEAWEFMERFP 495
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 199/405 (49%), Gaps = 45/405 (11%)
Query: 97 FNNIIRCYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+N +I Y+ P +A+ ++ SS + T S+ LS + G
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV-------LSACLLPGDLLERG 466
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
LHA + GF+ +V+ L+ MY+ K
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYA-------------------------------KC 495
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G++ + +F+ + +R++++W ++ A + L L KM G+ + +
Sbjct: 496 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEG 554
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A A L ++ Q +HG A K GF D I NA D+Y+KCG I + P
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEH-DSFIFNAAADMYSKCGEIGEVVKMLP--PSVN 611
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
++L SWN LIS +G E F M + G++P HV F+S+L+ACSHGGLV++GL +
Sbjct: 612 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAY 671
Query: 395 FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
++ + D + P I H CV+D+LGR+GRL EAE ++P + ND++WR+LL +C +H
Sbjct: 672 YDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK-PNDLVWRSLLASCKIH 730
Query: 455 NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE 499
N++ G++ E + ++E YVL SN+F GR++D E +R+
Sbjct: 731 GNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 775
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 37/295 (12%)
Query: 170 VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRD 229
V GLL+ S+G ++ QV N I+ L G V+ A +FD+M +
Sbjct: 149 VISSCGLLKDESLGRQII--GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206
Query: 230 RSVVSWTLVIDAYTR---MNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
R +SW + AY + + + + +L R+ + E T+ T+ + ++ + K
Sbjct: 207 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD----EVNSTTVSTLLSVLGHVDHQKW 262
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ +HG K GF+ + + + N L+ +YA G A+ F+++P K+L+SWNSL++
Sbjct: 263 GRGIHGLVVKMGFDSV-VCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMAS 319
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC-----------SHGGLVEEGLKFF 395
F +G + +A+ +M +G N+V F S L+AC HG +V GL F+
Sbjct: 320 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL-FY 378
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
N+++ + +V M G+ G + E+ +V LQ+P + V W L+G
Sbjct: 379 NQIIGN-----------ALVSMYGKIGEMSESRRVLLQMPRR--DVVAWNALIGG 420
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 145/347 (41%), Gaps = 43/347 (12%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S++ TF AC + G LH LV G ++ + L+ MY G + E+ +
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
V +MP R V WN I G Y P KA
Sbjct: 402 VLLQMPRRDVVAWNALIGG-------------------------------YAEDEDPDKA 430
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLG-YIKLCQSVHGYAEKRGFNVIDIRITNAL 310
LA F+ M V+G+ +T++++ A G ++ + +H Y GF D + N+L
Sbjct: 431 LAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES-DEHVKNSL 488
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
I +YAKCG + S+ F + + +N+++WN++++ A +G E ++ M G+
Sbjct: 489 ITMYAKCGDLSSSQDLFNGLDN--RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 546
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ +F LSA + ++EEG + V D + DM + G + E K+
Sbjct: 547 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKM 605
Query: 431 ALQVPHEVANDV-IWRTLLGACSVHNNVEIGQRVTEKILE--IEKGH 474
+P V + W L+ A H E ++LE I+ GH
Sbjct: 606 ---LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 43/332 (12%)
Query: 130 YSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEA 189
+ +++ T + L + + ++G +H LV K+GF V V LL+MY+ G VEA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
VF +MP + ++WN + V G + +
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDG-------------------------------RSL 327
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRG--FNVIDIRIT 307
AL L M+ G VT + A + + + +HG G +N I I
Sbjct: 328 DALGLLCSMIS-SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI---IG 383
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
NAL+ +Y K G + + R ++P R+++V+WN+LI G+A + +A+ F+ M G
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 368 LRPNHVAFLSVLSAC-SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
+ N++ +SVLSAC G L+E G K + + D ++ M + G L
Sbjct: 442 VSSNYITVVSVLSACLLPGDLLERG-KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
++ + + + N + W +L A + H + E
Sbjct: 501 SQDLFNGLDNR--NIITWNAMLAANAHHGHGE 530
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 136/329 (41%), Gaps = 63/329 (19%)
Query: 135 TFTFAFLSQACAYSNCT-RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+F A L AC S R G+Q+H V K G VYV T +L +Y + GL+ + +VF
Sbjct: 41 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 100
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+EMP R+ V+W + G GE E + ++ MR
Sbjct: 101 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG------------------------ 136
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+G+ E ++ + + L L + + G K G + + N+LI +
Sbjct: 137 --------EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES-KLAVENSLISM 187
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
G ++ A+ F ++ + ++ +SWNS+ + +A NG E+ F M + N
Sbjct: 188 LGSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 245
Query: 374 AFLSVLSACS-----------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
++LS HG +V+ G F+ +V C ++ M AG
Sbjct: 246 TVSTLLSVLGHVDHQKWGRGIHGLVVKMG---FDSVVCVCNT---------LLRMYAGAG 293
Query: 423 RLEEAEKVALQVPHEVANDVI-WRTLLGA 450
R EA V Q+P D+I W +L+ +
Sbjct: 294 RSVEANLVFKQMP---TKDLISWNSLMAS 319
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 127/272 (46%), Gaps = 45/272 (16%)
Query: 196 MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
MP R+ V+WN ++G+V R+ ++ + F
Sbjct: 1 MPVRNEVSWNTMMSGIV-------------------------------RVGLYLEGMEFF 29
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYI-KLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
RKM ++ GI+P+ + ++ A G + + VHG+ K G + D+ ++ A++ LY
Sbjct: 30 RKMCDL-GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL-LSDVYVSTAILHLY 87
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
G + + + F+E+PD +N+VSW SL+ G++ G E ++ ++ M G+ N +
Sbjct: 88 GVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 375 FLSVLSACSHGGLVEE---GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
V+S+C GL+++ G + ++V + + ++ MLG G ++ A +
Sbjct: 146 MSLVISSC---GLLKDESLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIF 201
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRV 463
Q+ + + W ++ A + + ++E R+
Sbjct: 202 DQMSER--DTISWNSIAAAYAQNGHIEESFRI 231
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH-GGLVEEGLK 393
+N VSWN+++SG G+ E +E F M G++P+ S+++AC G + EG++
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSV 453
+ V ++ D+ ++ + G G + + KV ++P N V W +L+ S
Sbjct: 64 -VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLMVGYSD 120
Query: 454 HNNVEIGQRVTEKILEIEKGHGGDYV-----LMSNIFVGVGRYKDAERLREVIDE 503
E++++I KG G+ V MS + G KD R++I +
Sbjct: 121 KGE-------PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 168
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 199/405 (49%), Gaps = 45/405 (11%)
Query: 97 FNNIIRCYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+N +I Y+ P +A+ ++ SS + T S+ LS + G
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV-------LSACLLPGDLLERG 483
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
LHA + GF+ +V+ L+ MY+ K
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYA-------------------------------KC 512
Query: 215 GEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
G++ + +F+ + +R++++W ++ A + L L KM G+ + +
Sbjct: 513 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEG 571
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A A L ++ Q +HG A K GF D I NA D+Y+KCG I + P
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEH-DSFIFNAAADMYSKCGEIGEVVKMLP--PSVN 628
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
++L SWN LIS +G E F M + G++P HV F+S+L+ACSHGGLV++GL +
Sbjct: 629 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAY 688
Query: 395 FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
++ + D + P I H CV+D+LGR+GRL EAE ++P + ND++WR+LL +C +H
Sbjct: 689 YDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK-PNDLVWRSLLASCKIH 747
Query: 455 NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE 499
N++ G++ E + ++E YVL SN+F GR++D E +R+
Sbjct: 748 GNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 37/295 (12%)
Query: 170 VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRD 229
V GLL+ S+G ++ QV N I+ L G V+ A +FD+M +
Sbjct: 166 VISSCGLLKDESLGRQII--GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 223
Query: 230 RSVVSWTLVIDAYTR---MNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
R +SW + AY + + + + +L R+ + E T+ T+ + ++ + K
Sbjct: 224 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD----EVNSTTVSTLLSVLGHVDHQKW 279
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ +HG K GF+ + + + N L+ +YA G A+ F+++P K+L+SWNSL++
Sbjct: 280 GRGIHGLVVKMGFDSV-VCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMAS 336
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC-----------SHGGLVEEGLKFF 395
F +G + +A+ +M +G N+V F S L+AC HG +V GL F+
Sbjct: 337 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL-FY 395
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
N+++ + +V M G+ G + E+ +V LQ+P + V W L+G
Sbjct: 396 NQIIGN-----------ALVSMYGKIGEMSESRRVLLQMPRR--DVVAWNALIGG 437
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 145/347 (41%), Gaps = 43/347 (12%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
S++ TF AC + G LH LV G ++ + L+ MY G + E+ +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
V +MP R V WN I G Y P KA
Sbjct: 419 VLLQMPRRDVVAWNALIGG-------------------------------YAEDEDPDKA 447
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLG-YIKLCQSVHGYAEKRGFNVIDIRITNAL 310
LA F+ M V+G+ +T++++ A G ++ + +H Y GF D + N+L
Sbjct: 448 LAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES-DEHVKNSL 505
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
I +YAKCG + S+ F + + +N+++WN++++ A +G E ++ M G+
Sbjct: 506 ITMYAKCGDLSSSQDLFNGLDN--RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 563
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ +F LSA + ++EEG + V D + DM + G + E K+
Sbjct: 564 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 431 ALQVPHEVANDV-IWRTLLGACSVHNNVEIGQRVTEKILE--IEKGH 474
+P V + W L+ A H E ++LE I+ GH
Sbjct: 623 ---LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 43/332 (12%)
Query: 130 YSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEA 189
+ +++ T + L + + ++G +H LV K+GF V V LL+MY+ G VEA
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
VF +MP + ++WN + V G + +
Sbjct: 316 NLVFKQMPTKDLISWNSLMASFVNDG-------------------------------RSL 344
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRG--FNVIDIRIT 307
AL L M+ G VT + A + + + +HG G +N I I
Sbjct: 345 DALGLLCSMIS-SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI---IG 400
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
NAL+ +Y K G + + R ++P R+++V+WN+LI G+A + +A+ F+ M G
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458
Query: 368 LRPNHVAFLSVLSAC-SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
+ N++ +SVLSAC G L+E G K + + D ++ M + G L
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERG-KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
++ + + + N + W +L A + H + E
Sbjct: 518 SQDLFNGLDNR--NIITWNAMLAANAHHGHGE 547
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 136/329 (41%), Gaps = 63/329 (19%)
Query: 135 TFTFAFLSQACAYSNCT-RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+F A L AC S R G+Q+H V K G VYV T +L +Y + GL+ + +VF
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+EMP R+ V+W + G GE E + ++ MR
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG------------------------ 153
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+G+ E ++ + + L L + + G K G + + N+LI +
Sbjct: 154 --------EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES-KLAVENSLISM 204
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
G ++ A+ F ++ + ++ +SWNS+ + +A NG E+ F M + N
Sbjct: 205 LGSMGNVDYANYIFDQMSE--RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 262
Query: 374 AFLSVLSACS-----------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
++LS HG +V+ G F+ +V C ++ M AG
Sbjct: 263 TVSTLLSVLGHVDHQKWGRGIHGLVVKMG---FDSVVCVCNT---------LLRMYAGAG 310
Query: 423 RLEEAEKVALQVPHEVANDVI-WRTLLGA 450
R EA V Q+P D+I W +L+ +
Sbjct: 311 RSVEANLVFKQMP---TKDLISWNSLMAS 336
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 45/289 (15%)
Query: 179 MYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLV 238
MY+ G + A +FD MP R+ V+WN ++G+V
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV-------------------------- 34
Query: 239 IDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI-KLCQSVHGYAEKR 297
R+ ++ + FRKM ++ GI+P+ + ++ A G + + VHG+ K
Sbjct: 35 -----RVGLYLEGMEFFRKMCDL-GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS 88
Query: 298 GFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAV 357
G + D+ ++ A++ LY G + + + F+E+PD +N+VSW SL+ G++ G E +
Sbjct: 89 GL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVI 145
Query: 358 ENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE---GLKFFNKMVNDCQIVPDIRHYGCV 414
+ ++ M G+ N + V+S+C GL+++ G + ++V + + +
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS-GLESKLAVENSL 201
Query: 415 VDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRV 463
+ MLG G ++ A + Q+ + + W ++ A + + ++E R+
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSER--DTISWNSIAAAYAQNGHIEESFRI 248
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+Y K G ++ A F +P +N VSWN+++SG G+ E +E F M G++P+
Sbjct: 1 MYTKFGRVKPARHLFDIMP--VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 373 VAFLSVLSACSH-GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
S+++AC G + EG++ + V ++ D+ ++ + G G + + KV
Sbjct: 59 FVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYV-----LMSNIFV 486
++P N V W +L+ S + G+ E++++I KG G+ V MS +
Sbjct: 118 EEMPDR--NVVSWTSLMVGYS-----DKGE--PEEVIDIYKGMRGEGVGCNENSMSLVIS 168
Query: 487 GVGRYKDAERLREVIDE 503
G KD R++I +
Sbjct: 169 SCGLLKDESLGRQIIGQ 185
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 175/317 (55%), Gaps = 9/317 (2%)
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDR-SVVSWTLVIDAYTRMNQPMKALALFRKMV 259
T N I K GE++ +F RM +R V+W +I Y KAL L M+
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 260 EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC 319
+ G T+ A A++ ++ VH + + D+ + +AL+D+Y+KCG
Sbjct: 612 QT-GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES-DVVVGSALVDMYSKCGR 669
Query: 320 IESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP-NHVAFLSV 378
++ A RFF +P +N SWNS+ISG+A +G EA++ FE M+ G P +HV F+ V
Sbjct: 670 LDYALRFFNTMP--VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGV 727
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEV 438
LSACSH GL+EEG K F M + + P I H+ C+ D+LGRAG L++ E ++P +
Sbjct: 728 LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK- 786
Query: 439 ANDVIWRTLLGACSVHN--NVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAER 496
N +IWRT+LGAC N E+G++ E + ++E + +YVL+ N++ GR++D +
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVK 846
Query: 497 LREVIDERIAIKIPGYS 513
R+ + + K GYS
Sbjct: 847 ARKKMKDADVKKEAGYS 863
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 38/334 (11%)
Query: 135 TFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
+FT +CA + G Q+H K+G +V V L+ +Y+ G L E ++F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
MP V+WN I AL+ +R +VV + A ++N+
Sbjct: 475 SMPEHDQVSWNSIIG----------ALARSERSLPEAVVCFLNAQRAGQKLNR------- 517
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT-NALIDL 313
+T ++ A+++L + +L + +HG A K N+ D T NALI
Sbjct: 518 --------------ITFSSVLSAVSSLSFGELGKQIHGLALKN--NIADEATTENALIAC 561
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCG ++ + F + + R N V+WNS+ISG+ N + +A++ M + G R +
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDN-VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
+ +VLSA + +E G++ V C + D+ +VDM + GRL+ A +
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKI 467
+P V N W +++ + H E ++ E +
Sbjct: 680 MP--VRNSYSWNSMISGYARHGQGEEALKLFETM 711
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 8/247 (3%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
++ K G + A VF++M R+ V+ ++ R +A LF M + + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 267 -TEVTLLTIFP--AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
+ V LL+ FP ++A +K + VHG+ G + I N L+++YAKCG I A
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
R F + D K+ VSWNS+I+G NG EAVE +++M + + P +S LS+C+
Sbjct: 369 RRVFYFMTD--KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
+ G + + + I ++ ++ + G L E K+ +P + V
Sbjct: 427 SLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--DQVS 483
Query: 444 WRTLLGA 450
W +++GA
Sbjct: 484 WNSIIGA 490
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 50/318 (15%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+F+ + RF H+ ++K VY+ L+ Y G V A +VFDEMP
Sbjct: 7 LSFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
R+ V+W ++G Y+R + +AL R
Sbjct: 64 LRNCVSWACIVSG-------------------------------YSRNGEHKEALVFLRD 92
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLC--QSVHGYAEKRGFNVIDIRITNALIDLYA 315
MV+ +GI + +++ A +G + + + +HG K + +D ++N LI +Y
Sbjct: 93 MVK-EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSY-AVDAVVSNVLISMYW 150
Query: 316 KC-GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
KC G + A F +I KN VSWNS+IS ++ G R A F +M+ G RP
Sbjct: 151 KCIGSVGYALCAFGDIE--VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 208
Query: 375 FLS-VLSACSHGGLVEEGLKFFNKMVNDCQ---IVPDIRHYGCVVDMLGRAGRLEEAEKV 430
F S V +ACS L E ++ +++ Q ++ D+ +V ++G L A KV
Sbjct: 209 FGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 431 ALQVPHEVANDVIWRTLL 448
Q+ E N V L+
Sbjct: 266 FNQM--ETRNAVTLNGLM 281
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 129 TYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVE 188
T LD+F +A + A A G+++HA + + V V + L+ MYS G L
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDY 672
Query: 189 AAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR 228
A + F+ MP R++ +WN I+G + G+ E AL +F+ M+
Sbjct: 673 ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 40/385 (10%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D T L + C + +H ++ + G++ + + L+ Y+ L+ +A V
Sbjct: 326 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 385
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
D M ++ V+ + I+GL G + A+S+F MRD
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD----------------------- 422
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
P +T++++ A + ++ + HG A +R + DI + +++D
Sbjct: 423 ------------TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 470
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
YAKCG IE A R F +I + KN++SW +IS +A+NG+ +A+ F+ M++ G PN
Sbjct: 471 AYAKCGAIEMARRTFDQITE--KNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNA 528
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
V +L+ LSAC+HGGLV++GL F MV + P ++HY C+VDML RAG ++ A ++
Sbjct: 529 VTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIK 587
Query: 433 QVPHEV-ANDVIWRTLLGAC-SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+P +V A W +L C + + I V ++LE+E Y+L S+ F
Sbjct: 588 NLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKS 647
Query: 491 YKDAERLREVIDERIAIKIPGYSLL 515
++D +R ++ ER + GYS++
Sbjct: 648 WEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 33/272 (12%)
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A +FD M +R V+SW++VI +Y + +P+ L LF++MV EP VT+ ++ A
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
+ I + +SVHG++ +RGF++ D+ + N+LID+Y+K ++SA R F E +N+VS
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT--CRNIVS 295
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS-----------HGGLV 388
WNS+++GF N EA+E F M + + + V +S+L C HG ++
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 389 EEGLKFFN-------------KMVNDCQIVPDIRHYGCVVDM------LGRAGRLEEAEK 429
G + +V+D V D Y VV L AGR +EA
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 430 VALQVPHEVANDVIWRTLLGACSVHNNVEIGQ 461
+ + + N + +LL ACSV ++ +
Sbjct: 416 IFCHM-RDTPNAITVISLLNACSVSADLRTSK 446
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 149/356 (41%), Gaps = 46/356 (12%)
Query: 100 IIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHA 159
+IR Y S P + ++ + T D T + +AC G +H
Sbjct: 196 VIRSYVQSKEPVVGLKLFKEMVHEAKT-----EPDCVTVTSVLKACTVMEDIDVGRSVHG 250
Query: 160 LVFKVGFQF-HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVE 218
+ GF V+V L+ MYS G FD V+
Sbjct: 251 FSIRRGFDLADVFVCNSLIDMYSKG---------FD----------------------VD 279
Query: 219 LALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAI 278
A VFD R++VSW ++ + + +AL +F MV+ + +E EVT++++
Sbjct: 280 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ-EAVEVDEVTVVSLLRVC 338
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLV 338
C+S+HG +RG+ ++ ++ +LID Y C ++ A + K++V
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALS-SLIDAYTSCSLVDDAGTVLDSMT--YKDVV 395
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
S +++ISG A G + EA+ F +M PN + +S+L+ACS +
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 399 VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ + DI +VD + G +E A + Q+ + N + W ++ A +++
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEK--NIISWTVIISAYAIN 506
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 184/327 (56%), Gaps = 7/327 (2%)
Query: 188 EAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ 247
+A +F EMP+R +WN+ ++G G VELA F++ ++ VSW +I AY +
Sbjct: 330 DAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKD 389
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI-DIRI 306
+A+ LF +M ++G +P TL ++ A L ++L +H K VI D+ +
Sbjct: 390 YKEAVDLFIRM-NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK---TVIPDVPV 445
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
NALI +Y++CG I + R F E+ ++ +++WN++I G+A +G A EA+ F +M+
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMK-LKREVITWNAMIGGYAFHGNASEALNLFGSMKSN 504
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
G+ P+H+ F+SVL+AC+H GLV+E F M++ +I P + HY +V++ G+ EE
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEE 564
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFV 486
A + +P E + +W LL AC ++NNV + E + +E YVL+ N++
Sbjct: 565 AMYIITSMPFE-PDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYA 623
Query: 487 GVGRYKDAERLREVIDERIAIKIPGYS 513
+G + +A ++R ++ + K G S
Sbjct: 624 DMGLWDEASQVRMNMESKRIKKERGSS 650
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 30/285 (10%)
Query: 181 SIGGL--LVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLV 238
S GG+ L EA ++FDEMP R + +WN I+G K + AL +F++M +R+ VSW+ +
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 239 IDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRG 298
I + + + A+ LFRKM ++ + + I N + + Y
Sbjct: 174 ITGFCQNGEVDSAVVLFRKM----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 299 FNVIDIRITNALIDLYAKCGCIESASRFFQEIPD-------------WRKNLVSWNSLIS 345
+ N LI Y + G +E+A F +IPD + KN+VSWNS+I
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIV 405
+ G A F+ M+ + +++ +++ H +E+ F++M N
Sbjct: 290 AYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPN----- 340
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
D + +V G +E A + P + + V W +++ A
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTPEK--HTVSWNSIIAA 383
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 67/328 (20%)
Query: 184 GLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT 243
G + EA +F+++ R+TVTWN I+G VK E+ A +FD M R VV+W +I Y
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGY- 112
Query: 244 RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID 303
V GI E +F + + + GYA+ R
Sbjct: 113 ---------------VSCGGIRFLE-EARKLFDEMPSRDSFSWNTMISGYAKNR------ 150
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
RI AL+ F+++P+ +N VSW+++I+GF NG AV F M
Sbjct: 151 -RIGEALL--------------LFEKMPE--RNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 364 EKAGLRP--NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRA 421
P VA L S V L + +V+ + + + Y ++ G+
Sbjct: 194 PVKDSSPLCALVAGLIKNERLSEAAWV---LGQYGSLVSGREDL--VYAYNTLIVGYGQR 248
Query: 422 GRLEEAEKVALQVPHEVAND-------------VIWRTLLGACSVHNNVEIGQRVTEKIL 468
G++E A + Q+P +D V W +++ A +++G V+ ++L
Sbjct: 249 GQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY-----LKVGDVVSARLL 303
Query: 469 --EIEKGHGGDYVLMSNIFVGVGRYKDA 494
+++ + M + +V V R +DA
Sbjct: 304 FDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 141/359 (39%), Gaps = 88/359 (24%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM-------- 227
++ Y+ + EA +F++MP R+ V+W+ I G + GEV+ A+ +F +M
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL 201
Query: 228 -----------------------------RDRSVVSWTLVIDAYTRMNQPMKALALFRKM 258
R+ V ++ +I Y + Q A LF ++
Sbjct: 202 CALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI 261
Query: 259 VEVDGIE----------PTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN 308
++ G + V+ ++ A +G + + + + R D N
Sbjct: 262 PDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR-----DTISWN 316
Query: 309 ALIDLYAKCGCIESASRFFQEIPD-----W------------------------RKNLVS 339
+ID Y +E A F E+P+ W K+ VS
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
WNS+I+ + N +EAV+ F M G +P+ S+LSA + GLV L +
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQI 434
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNN 456
++PD+ + ++ M R G + E+ ++ +++ EV + W ++G + H N
Sbjct: 435 VVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV---ITWNAMIGGYAFHGN 490
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP-HRSTVTWNVFING 210
R G+Q+H +V K V V L+ MYS G ++E+ ++FDEM R +TWN I G
Sbjct: 426 RLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 211 LVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
G AL++F M+ + +++ V++A +A A F M+ V IEP
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 196/411 (47%), Gaps = 41/411 (9%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
S++ +I+ CY+ + I + S T +D + C S+
Sbjct: 311 SIVGLTSIVSCYA------EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLV 212
G+ LH K G V GL+ MYS
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYS------------------------------- 393
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
K+ +VE L +F+++++ ++SW VI + + A +F +M+ G+ P +T+
Sbjct: 394 KFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIA 453
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++ + L + L + +HGY + F + + ALID+YAKCG A F+ I
Sbjct: 454 SLLAGCSQLCCLNLGKELHGYTLRNNFENENF-VCTALIDMYAKCGNEVQAESVFKSIK- 511
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
+WNS+ISG++++G+ A+ + M + GL+P+ + FL VLSAC+HGG V+EG
Sbjct: 512 -APCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 570
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
F M+ + I P ++HY +V +LGRA EA + ++ + + +W LL AC
Sbjct: 571 ICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIK-PDSAVWGALLSACI 629
Query: 453 VHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
+H +E+G+ V K+ ++ +GG YVLMSN++ + D R+R ++ +
Sbjct: 630 IHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 137/298 (45%), Gaps = 46/298 (15%)
Query: 136 FTFAFLSQACAYS-NCTRFGI-QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
FT + QA S N + + Q+ + K G VYV+T LL +Y
Sbjct: 49 FTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLY------------- 95
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+K G V A +FD M +R V W +I Y+R A
Sbjct: 96 ------------------LKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWK 137
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF M++ G P+ TL+ + P G++ +SVHG A K G +D ++ NALI
Sbjct: 138 LFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE-LDSQVKNALISF 195
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+KC + SA F+E+ D K+ VSWN++I ++ +G+ EA+ F+NM + + + V
Sbjct: 196 YSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPV 253
Query: 374 AFLSVLSA-CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+++LSA SH L + +V C +V DI +V R G L AE++
Sbjct: 254 TIINLLSAHVSHEPL--------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N I+ K E+ A +F M+D+S VSW +I AY++ +A+ +F+ M E + +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN-V 248
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
E + VT++ + A + + +H K G V DI + +L+ Y++CGC+ SA
Sbjct: 249 EISPVTIINLLSAHVSH------EPLHCLVVKCGM-VNDISVVTSLVCAYSRCGCLVSAE 301
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
R + + ++V S++S +A G AV F + ++ + VA + +L C
Sbjct: 302 RLYASAK--QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 385 GGLVEEGLKF 394
++ G+
Sbjct: 360 SSHIDIGMSL 369
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
+ V + K G + + + +L++LY K GC+ SA F E+P+ ++ V WN+LI G+
Sbjct: 70 EQVQTHLTKSGLDRF-VYVKTSLLNLYLKKGCVTSAQMLFDEMPE--RDTVVWNALICGY 126
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
+ NG +A + F M + G P+ +++L C G V +G + + + + D
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG-RSVHGVAAKSGLELD 185
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACS 452
+ ++ + L AE + ++ + + V W T++GA S
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDK--STVSWNTMIGAYS 228
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 186/343 (54%), Gaps = 19/343 (5%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
+LQ GL +++ + D T N I + ++E A+ VF + D ++ SW
Sbjct: 597 VLQGRCFHGLAIKSLRELD------TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSW 650
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
VI A ++ + LFR + +EP E+T + + A LG H +
Sbjct: 651 NCVISALSQNKAGREVFQLFRNL----KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
+RGF + ++ AL+D+Y+ CG +E+ + F+ ++ +WNS+IS +GM +
Sbjct: 707 RRGFQA-NPFVSAALVDMYSSCGMLETGMKVFRN--SGVNSISAWNSVISAHGFHGMGEK 763
Query: 356 AVENFENMEK-AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCV 414
A+E F+ + + + PN +F+S+LSACSH G ++EGL ++ +M + P H +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 415 VDMLGRAGRLEEAEK--VALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEK 472
VDMLGRAG+L EA + + P + +W LL AC+ H + ++G+ V E + E+E
Sbjct: 824 VDMLGRAGKLREAYEFITGIGEPQKAG---VWGALLSACNYHGDTKLGKEVAEVLFEMEP 880
Query: 473 GHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYSLL 515
+ Y+ ++N +VG+G +++A RLR+++++ K+PGYS++
Sbjct: 881 DNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 37/253 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGF--QFHVYVQTGLLQMYSIGGLLVEAAQ 191
DT TF+ + AC+ G LH LV K G+ + HV V ++ MYS G A
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
VF+E+ R ++ N +NG G E A + ++M+
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS---------------------- 385
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
VD I+P T+++I +L + + ++VHGY + + + N++I
Sbjct: 386 ---------VDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVI 436
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGLR 369
D+Y KCG A F+ ++LVSWNS+IS F+ NG +A F+ + E + +
Sbjct: 437 DMYGKCGLTTQAELLFKTTT--HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSK 494
Query: 370 PNHVAFLSVLSAC 382
+ L++L++C
Sbjct: 495 FSLSTVLAILTSC 507
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N +N K + A VF M R +VSW ++ P K+L F+ M G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG-SGQ 285
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN-VIDIRITNALIDLYAKCGCIESA 323
E VT + A +++ + L +S+HG K G++ + + N++I +Y+KCG E+A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG-LRPNHVAFLSVLSAC 382
F+E+ ++++S N++++GFA NGM EA M+ ++P+ +S+ S C
Sbjct: 346 ETVFEELV--CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDV 442
EG V + V+DM G+ G +AE + H + V
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR--DLV 461
Query: 443 IWRTLLGACS 452
W +++ A S
Sbjct: 462 SWNSMISAFS 471
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 213 KWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ GE+ + +FD ++++ V+ W +I A + + + A+ LF +M+ G E TLL
Sbjct: 134 RTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIH-KGNEFDSTTLL 192
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
A+++L + C +H A + G V D + NAL++LYAK + SA F +
Sbjct: 193 LAASALSSLHLSRKCSMLHCLAIETGL-VGDSSLCNALMNLYAKGENLSSAECVFTHME- 250
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
+++VSWN++++ NG R++++ F++M +G + V F V+SACS
Sbjct: 251 -HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 193/381 (50%), Gaps = 35/381 (9%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
+SLD +AC+ R G ++H L + V+ L+ MYS
Sbjct: 276 TSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYS--------- 326
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
K ++ AL VF + + S+ +W +I Y ++N+ +
Sbjct: 327 ----------------------KCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEE 364
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
A L R+M+ V G +P +TL +I P A + ++ + H Y +R + N+L
Sbjct: 365 ASHLLREML-VAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D+YAK G I +A + + +++ V++ SLI G+ G A+ F+ M ++G++P
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMS--KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+HV ++VLSACSH LV EG + F KM + I P ++H+ C+VD+ GRAG L +A+ +
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+P++ + W TLL AC +H N +IG+ EK+LE++ + G YVL++N++ G
Sbjct: 542 IHNMPYK-PSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGS 600
Query: 491 YKDAERLREVIDERIAIKIPG 511
+ +R ++ + K PG
Sbjct: 601 WSKLAEVRTIMRDLGVKKDPG 621
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 174/388 (44%), Gaps = 39/388 (10%)
Query: 72 QVHSHITTSGLFHHP--------------FHNTSTSLLLFNNIIRCYSLSPFPHQAIHFS 117
QVH+H +SG+ +H HN + S++ ++I L P P + +
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI-----LHPLPWNVL-IA 117
Query: 118 IHTLNH--SSTFFTYSSL-------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQF 168
+ N Y + D FT+ + +AC + FG +H + ++
Sbjct: 118 SYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKS 177
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR 228
+YV L+ MY + A ++FD M R V+WN IN G A +FD+M
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 229 ----DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV-DGIEPTEVTLLTIFPAIANLGY 283
+ SV++W ++ + + AL L +M ++P V ++ A + +G
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP--VAMIIGLKACSLIGA 295
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSL 343
I+L + +HG A ++ ID + N LI +Y+KC + A F++ + +L +WNS+
Sbjct: 296 IRLGKEIHGLAIHSSYDGID-NVRNTLITMYSKCKDLRHALIVFRQTEE--NSLCTWNSI 352
Query: 344 ISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ 403
ISG+A + EA M AG +PN + S+L C+ ++ G +F ++
Sbjct: 353 ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC 412
Query: 404 IVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
+ +VD+ ++G++ A++V+
Sbjct: 413 FKDYTMLWNSLVDVYAKSGKIVAAKQVS 440
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 190/381 (49%), Gaps = 36/381 (9%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
S +T TFA + +A A G QLH K+G + +V GL+ MYS
Sbjct: 220 SDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYS--------- 270
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
K G++E A F+ M +++ V+W VI Y +
Sbjct: 271 ----------------------KCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
AL L M + G+ + TL + L ++L + H + GF +I AL
Sbjct: 309 ALCLLYDMRD-SGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFES-EIVANTAL 366
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D Y+K G +++A F ++P RKN++SWN+L+ G+A +G +AV+ FE M A + P
Sbjct: 367 VDFYSKWGRVDTARYVFDKLP--RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
NHV FL+VLSAC++ GL E+G + F M I P HY C++++LGR G L+EA
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+ P + + +W LL AC + N+E+G+ V EK+ + G+YV+M N++ +G+
Sbjct: 485 IRRAPLKTTVN-MWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGK 543
Query: 491 YKDAERLREVIDERIAIKIPG 511
+A + E ++ + +P
Sbjct: 544 TAEAAGVLETLESKGLSMMPA 564
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 155/345 (44%), Gaps = 64/345 (18%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T+ L +AC R +++ + GF+ Y+ +L M+ G++++A ++FDE+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
P +R++ S+ +I + ++A LF+
Sbjct: 185 P-------------------------------ERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 257 KMVEVDGIEPTEV-TLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
M E + E T + A A LG I + + +H A K G V + ++ LID+Y+
Sbjct: 214 MMWE--ELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV-VDNTFVSCGLIDMYS 270
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
KCG IE A F+ +P+ K V+WN++I+G+A++G + EA+ +M +G+ +
Sbjct: 271 KCGDIEDARCAFECMPE--KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFT- 327
Query: 376 LSV------------LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
LS+ L+ +H L+ G + +IV + +VD + GR
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGF--------ESEIVANT----ALVDFYSKWGR 375
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKIL 468
++ A V ++P + N + W L+G + H ++ EK++
Sbjct: 376 VDTARYVFDKLPRK--NIISWNALMGGYANHGRGTDAVKLFEKMI 418
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 212/423 (50%), Gaps = 39/423 (9%)
Query: 91 STSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNC 150
S L+ +N++I +S A I H + D +T+ L AC+
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRH------WVETDIYTYTGLLSACSGEEH 320
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFING 210
FG LH +V K G + L+ MY + P
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYI-------------QFPT------------ 355
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
G +E ALS+F+ ++ + ++SW +I + + A+ F + + I+ +
Sbjct: 356 ----GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYA 410
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
+ + ++L ++L Q +H A K GF V + + ++LI +Y+KCG IESA + FQ+I
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGF-VSNEFVISSLIVMYSKCGIIESARKCFQQI 469
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
+ + V+WN++I G+A +G+ + +++ F M ++ +HV F ++L+ACSH GL++E
Sbjct: 470 SS-KHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQE 528
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
GL+ N M +I P + HY VD+LGRAG + +A+++ +P + ++ +T LG
Sbjct: 529 GLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN-PDPMVLKTFLGV 587
Query: 451 CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIP 510
C +E+ +V +LEIE YV +S+++ + ++++ +++++ ER K+P
Sbjct: 588 CRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVP 647
Query: 511 GYS 513
G+S
Sbjct: 648 GWS 650
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 156/369 (42%), Gaps = 71/369 (19%)
Query: 131 SSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAA 190
S +D ++F+ L + A G Q+H LV K G++ +VYV + L+ MY+ + +A
Sbjct: 97 SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAF 156
Query: 191 QVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMK 250
+ F E+ ++V+WN I G V ++RD W L
Sbjct: 157 EAFKEISEPNSVSWNALIAGFV-------------QVRDIKTAFWLL------------- 190
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIF--PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITN 308
L + V +D T LLT+ P NL + VH K G +I I N
Sbjct: 191 GLMEMKAAVTMDA--GTFAPLLTLLDDPMFCNL-----LKQVHAKVLKLGLQH-EITICN 242
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
A+I YA CG + A R F + K+L+SWNS+I+GF+ + + A E F M++ +
Sbjct: 243 AMISSYADCGSVSDAKRVFDGLGG-SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 369 RPNHVAFLSVLSACS-----------HGGLVEEGLKFFNKMVN----------------- 400
+ + +LSACS HG ++++GL+ N
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361
Query: 401 ----DCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVH 454
+ D+ + ++ + G E+A K L+ +D + LL +CS
Sbjct: 362 LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDL 421
Query: 455 NNVEIGQRV 463
+++GQ++
Sbjct: 422 ATLQLGQQI 430
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Query: 158 HALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEV 217
H K G +YV +L Y G L A +FDEMP R +V+WN I+G G++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 218 ELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPA 277
E A +F M+ R +VDG + +
Sbjct: 83 EDAWCLFTCMK---------------------------RSGSDVDG-----YSFSRLLKG 110
Query: 278 IANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNL 337
IA++ L + VHG K G+ ++ + ++L+D+YAKC +E A F+EI + N
Sbjct: 111 IASVKRFDLGEQVHGLVIKGGYEC-NVYVGSSLVDMYAKCERVEDAFEAFKEISE--PNS 167
Query: 338 VSWNSLISGF 347
VSWN+LI+GF
Sbjct: 168 VSWNALIAGF 177
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 290 VHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAM 349
H YA K G ++ DI ++N ++D Y K G + A+ F E+P +++ VSWN++ISG+
Sbjct: 22 THCYAIKCG-SISDIYVSNRILDSYIKFGFLGYANMLFDEMP--KRDSVSWNTMISGYTS 78
Query: 350 NGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN---DCQIVP 406
G +A F M+++G + +F +L + + G + ++ +C +
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 407 DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
+VDM + R+E+A + ++ N V W L+
Sbjct: 139 G----SSLVDMYAKCERVEDAFEAFKEISE--PNSVSWNALIAG 176
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 177/318 (55%), Gaps = 10/318 (3%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
+TF+ ++C C QLH+++ ++G++ + YV + L++ Y+ L+ +A + D
Sbjct: 417 YTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 196 MPH-RSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
S V N+ + G+ ++ + + VSW + I A +R + + + L
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
F+ M++ + I P + T ++I + L + L S+HG K F+ D + N LID+Y
Sbjct: 533 FKHMLQSN-IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMY 591
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
KCG I S + F+E + KNL++W +LIS ++G +EA+E F+ G +P+ V+
Sbjct: 592 GKCGSIRSVMKVFEETRE--KNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
F+S+L+AC HGG+V+EG+ F KM D + P++ HY C VD+L R G L+EAE + ++
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
Query: 435 PHEVANDVIWRTLLGACS 452
P A+ +WRT L C+
Sbjct: 709 PFP-ADAPVWRTFLDGCN 725
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 76/350 (21%)
Query: 170 VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR- 228
VYV ++ +Y G + A +VFD+MP R+ V++N I G K+G+V+ A VF MR
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 229 -----DRSVVS--------------------------------WTLVIDAYTRM------ 245
++S VS T ++ Y R+
Sbjct: 109 FGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 246 -----NQPMKALALFRKMVEV-------------------DGIEPTEVTLLTIFPAIANL 281
+ P K+L + M+ + G TE + L + ++ +
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 282 GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN 341
+ + + +H A K+G + +I + N+LI Y KCG A R FQ+ W ++VSWN
Sbjct: 229 KDLDISKQLHCSATKKGLDC-EISVVNSLISAYGKCGNTHMAERMFQDAGSW--DIVSWN 285
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV-N 400
++I A + +A++ F +M + G PN ++SVL S L+ G + ++ N
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 401 DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
C+ I ++D + G LE++ + + N V W LL
Sbjct: 346 GCE--TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK--NIVCWNALLSG 391
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 38/277 (13%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N I+ K G +A +F +VSW +I A + P+KAL LF M E G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPE-HGF 312
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P + T +++ + + + + +HG K G I + NALID YAKCG +E +
Sbjct: 313 SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET-GIVLGNALIDFYAKCGNLEDSR 371
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS- 383
F I D KN+V WN+L+SG+A N + F M + G RP F + L +C
Sbjct: 372 LCFDYIRD--KNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 384 ------HGGLVEEGLK-------------FFNKMVNDCQIVPD-------IRHYGCVVDM 417
H +V G + N+++ND ++ D + V +
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 418 LGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACS 452
R G+ E+ K+ L+ P V+ W + ACS
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVS----WNIAIAACS 521
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 137/329 (41%), Gaps = 50/329 (15%)
Query: 174 TGLLQMYSIG----GLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRD 229
+ L+Q+ S G G+L++ V N I+ K G +E + FD +RD
Sbjct: 326 SSLVQLLSCGRQIHGMLIKNG------CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD 379
Query: 230 RSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPA------------ 277
+++V W ++ Y + P+ L+LF +M+++ G PTE T T +
Sbjct: 380 KNIVCWNALLSGYANKDGPI-CLSLFLQMLQM-GFRPTEYTFSTALKSCCVTELQQLHSV 437
Query: 278 IANLGYIK----LCQSVHGYAEKRGFN----VID-------IRITNALIDLYAKCGCIES 322
I +GY L + YA+ + N ++D + N + +Y++ G
Sbjct: 438 IVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHE 497
Query: 323 ASRFFQ--EIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ + E PD VSWN I+ + + E +E F++M ++ +RP+ F+S+LS
Sbjct: 498 SVKLISTLEQPD----TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILS 553
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
CS + G + D ++DM G+ G + KV + + N
Sbjct: 554 LCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK--N 611
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILE 469
+ W L+ +H GQ EK E
Sbjct: 612 LITWTALISCLGIHG---YGQEALEKFKE 637
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 196/385 (50%), Gaps = 46/385 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FTF+ L AC G Q+HA++FKV +QF + V T LL MY+ L +A + F
Sbjct: 244 DYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ M R+ VVSW +I + + + +A+
Sbjct: 300 ESMVVRN-------------------------------VVSWNAMIVGFAQNGEGREAMR 328
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF +M+ ++ ++P E+T ++ + A I + V K+G + + + N+LI
Sbjct: 329 LFGQML-LENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG-SADFLSVANSLISS 386
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y++ G + A F I + +LVSW S+I A +G A E+++ FE+M + L+P+ +
Sbjct: 387 YSRNGNLSEALLCFHSIRE--PDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKI 443
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
FL VLSACSHGGLV+EGL+ F +M +I + HY C++D+LGRAG ++EA V
Sbjct: 444 TFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNS 503
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P E + + G C++H E + +K+LEIE +Y ++SN +V G +
Sbjct: 504 MPTEPSTHAL-AAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQ 562
Query: 494 AERLREVIDERIAI---KIPGYSLL 515
A LR+ ER K PG S L
Sbjct: 563 AALLRK--RERRNCYNPKTPGCSWL 585
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 26/255 (10%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N + K E + A +FD M R++V+W ++I + + A + I
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHL-GFCYLSRI 133
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQS---------VHGYAEKRGFNVIDIRITNALIDLYA 315
T+V+L ++ +G I+LC +H K+G T +L+ Y
Sbjct: 134 LFTDVSL----DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPST-SLVHFYG 188
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGLRPNHV 373
KCG I A R F+ + D ++LV WN+L+S + +NGM EA + M +K R ++
Sbjct: 189 KCGLIVEARRVFEAVLD--RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F S+LSAC +E+G K + ++ DI +++M ++ L +A +
Sbjct: 247 TFSSLLSACR----IEQG-KQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 434 VPHEVANDVIWRTLL 448
+ V N V W ++
Sbjct: 302 MV--VRNVVSWNAMI 314
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 177/313 (56%), Gaps = 5/313 (1%)
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
TV N ++ K + A VF+ ++ + VVSWT +I + +A+ LFR+MVE
Sbjct: 521 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
G+ V LL I A A+L + + +H Y ++GF ++ I A++D+YA CG +
Sbjct: 581 T-GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF-CLEGSIAVAVVDMYACCGDL 638
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+SA F I RK L+ + S+I+ + M+G + AVE F+ M + P+H++FL++L
Sbjct: 639 QSAKAVFDRIE--RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
ACSH GL++EG F M ++ ++ P HY C+VDMLGRA + EA + + E
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA 756
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREV 500
+V W LL AC H+ EIG+ +++LE+E + G+ VL+SN+F GR+ D E++R
Sbjct: 757 EV-WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 815
Query: 501 IDERIAIKIPGYS 513
+ K PG S
Sbjct: 816 MKASGMEKHPGCS 828
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 154/359 (42%), Gaps = 47/359 (13%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
FA++ + C G QLH+ +FK F + G L
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKL------------------- 122
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
VF+ G K G ++ A VFD M DR+ +W +I AY +P ALAL+
Sbjct: 123 ---------VFMYG--KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYW 171
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
M V+G+ + + A A L I+ +H K G++ I NAL+ +YAK
Sbjct: 172 NM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF-IVNALVSMYAK 229
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
+ +A R F + + + V WNS++S ++ +G + E +E F M G PN +
Sbjct: 230 NDDLSAARRLFDGFQE-KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
S L+AC + G + ++ ++ ++ M R G++ +AE++ Q+ +
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 437 EVANDVIWRTLLGACSVHNNVEIGQRVTEKILE-----IEKGHGGDYVLMSNIFVGVGR 490
A+ V W +L+ + + ++ LE I GH D V M++I GR
Sbjct: 349 --ADVVTWNSLIKG-------YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 128/319 (40%), Gaps = 76/319 (23%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQM----------------- 179
+F L +ACA R G +LH+L+ K+G+ ++ L+ M
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 180 ---------------YSIGGLLVEAAQVFDEM------PHRSTVT--------------- 203
YS G +E ++F EM P+ T+
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 204 -------------------WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTR 244
N I + G++ A + +M + VV+W +I Y +
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 245 MNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI 304
+AL F M+ G + EV++ +I A L + +H Y K G++ ++
Sbjct: 364 NLMYKEALEFFSDMIAA-GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS-NL 421
Query: 305 RITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENME 364
++ N LID+Y+KC R F + D K+L+SW ++I+G+A N EA+E F ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHD--KDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 365 KAGLRPNHVAFLSVLSACS 383
K + + + S+L A S
Sbjct: 480 KKRMEIDEMILGSILRASS 498
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 45/407 (11%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQ 156
+ +I Y + P +AI + ++ S D T A + ACA G++
Sbjct: 366 WTTMISGYEYNFLPDKAID-TYRMMDQDSV-----KPDEITVAAVLSACATLGDLDTGVE 419
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
LH L K +V V L+ MYS + +A +F +P ++
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN---------------- 463
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
V+SWT +I N+ +AL R+M ++P +TL
Sbjct: 464 ---------------VISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALA 506
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
A A +G + + +H + + G + D + NAL+D+Y +CG + +A + + +K+
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDF-LPNALLDMYVRCGRMNTA---WSQFNSQKKD 562
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+ SWN L++G++ G VE F+ M K+ +RP+ + F+S+L CS +V +GL +F+
Sbjct: 563 VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFS 622
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
KM D + P+++HY CVVD+LGRAG L+EA K ++P + +W LL AC +H+
Sbjct: 623 KM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP-VTPDPAVWGALLNACRIHHK 680
Query: 457 VEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
+++G+ + I E++K G Y+L+ N++ G++++ ++R ++ E
Sbjct: 681 IDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N F+ V++G + A VF +M +R++ SW +++ Y + +A+ L+ +M+ V G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+P T + + + + VH + + G+ +DI + NALI +Y KCG ++SA
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYE-LDIDVVNALITMYVKCGDVKSAR 251
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
F +P R++++SWN++ISG+ NGM E +E F M + P+ + SV+SAC
Sbjct: 252 LLFDRMP--RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
G G + + V DI + M AG EAEK+ ++ E + V W
Sbjct: 310 LGDRRLG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM--ERKDIVSW 366
Query: 445 RTLLGA 450
T++
Sbjct: 367 TTMISG 372
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 151/322 (46%), Gaps = 38/322 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D +TF + + C G ++H V + G++ + V L+ MY
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY------------- 241
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
VK G+V+ A +FDRM R ++SW +I Y + L
Sbjct: 242 ------------------VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLE 283
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF M + ++P +TL ++ A LG +L + +H Y GF +DI + N+L +
Sbjct: 284 LFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF-AVDISVCNSLTQM 341
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y G A + F + RK++VSW ++ISG+ N + +A++ + M++ ++P+ +
Sbjct: 342 YLNAGSWREAEKLFSRME--RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
+VLSAC+ G ++ G++ +K+ +++ + +++M + +++A +
Sbjct: 400 TVAAVLSACATLGDLDTGVE-LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458
Query: 434 VPHEVANDVIWRTLLGACSVHN 455
+P + N + W +++ ++N
Sbjct: 459 IPRK--NVISWTSIIAGLRLNN 478
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 103/238 (43%), Gaps = 36/238 (15%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + AC R G +HA V GF + V L QMY G EA ++F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
M + V+W I+G Y P KA+
Sbjct: 356 SRMERKDIVSWTTMISG-------------------------------YEYNFLPDKAID 384
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+R M++ D ++P E+T+ + A A LG + +H A K + + + N LI++
Sbjct: 385 TYR-MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL-ISYVIVANNLINM 442
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
Y+KC CI+ A F IP RKN++SW S+I+G +N EA+ M K L+PN
Sbjct: 443 YSKCKCIDKALDIFHNIP--RKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPN 497
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 172/308 (55%), Gaps = 7/308 (2%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
F+ + G V L+ +F+ + R VV W+ +I Y + + L +M + +GIE
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK-EGIEA 351
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
VTLL I A N + +VH K GF + I + NALID+YAKCG + +A
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGF-MSHILLGNALIDMYAKCGSLSAAREV 410
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F E+ + K+LVSW+S+I+ + ++G EA+E F+ M K G + +AFL++LSAC+H G
Sbjct: 411 FYELTE--KDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAG 468
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRT 446
LVEE F + + + HY C +++LGR G++++A +V + +P + + IW +
Sbjct: 469 LVEEAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSAR-IWSS 526
Query: 447 LLGACSVHNNVEI-GQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERI 505
LL AC H +++ G+ + ++++ E + +YVL+S I G Y AE +R V+ R
Sbjct: 527 LLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRK 586
Query: 506 AIKIPGYS 513
K G+S
Sbjct: 587 LNKCYGFS 594
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 163/347 (46%), Gaps = 21/347 (6%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
DT ++ + +C ++L ++ GF + LL + + G + A++F
Sbjct: 112 DTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMF 171
Query: 194 ------DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ 247
DE S + ++ +K+ + A VFD+M ++ VSWT +I
Sbjct: 172 HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQN 231
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY-IKLCQSVHGYAEKRGFNVIDIRI 306
+ LFR M + + + P VTLL++ PA L Y L + +HG++ + G + D R+
Sbjct: 232 YEMGVDLFRAM-QRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHA-DERL 289
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
T A + +Y +CG + S SR E R ++V W+S+ISG+A G E + M K
Sbjct: 290 TAAFMTMYCRCGNV-SLSRVLFETSKVR-DVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
G+ N V L+++SAC++ L+ ++++ C + I ++DM + G L
Sbjct: 348 GIEANSVTLLAIVSACTNSTLLSFASTVHSQILK-CGFMSHILLGNALIDMYAKCGSLSA 406
Query: 427 AEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKG 473
A +V ++ + + V W +++ A +H + + LEI KG
Sbjct: 407 AREVFYELTEK--DLVSWSSMINAYGLHGH-------GSEALEIFKG 444
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 101/245 (41%), Gaps = 42/245 (17%)
Query: 143 QACAYSNCT-RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST 201
+ACA+ G QLH L K G V L+ MY+ +VFDEM HR T
Sbjct: 54 KACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDT 113
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAY----TRMNQPMKALALFRK 257
V++ IN + G + A+ + M + + ++ + TRM K +F
Sbjct: 114 VSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHA 173
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
+V VD E + ++L ++ AL+D+Y K
Sbjct: 174 LVLVD--ERMQESVL---------------------------------LSTALVDMYLKF 198
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
+A F ++ KN VSW ++ISG N V+ F M++ LRPN V LS
Sbjct: 199 DDHAAAFHVFDQME--VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 378 VLSAC 382
VL AC
Sbjct: 257 VLPAC 261
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 34/218 (15%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
++ T + AC S F +H+ + K GF H+ + L+ MY+ G L A +VF
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF 411
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
E+ + V+W+ IN AY +AL
Sbjct: 412 YELTEKDLVSWSSMIN-------------------------------AYGLHGHGSEALE 440
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+F+ M++ G E ++ L I A + G ++ Q++ A K V + I+L
Sbjct: 441 IFKGMIK-GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVT-LEHYACYINL 498
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
+ G I+ A +P + + W+SL+S +G
Sbjct: 499 LGRFGKIDDAFEVTINMP-MKPSARIWSSLLSACETHG 535
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
D ++N+LI +YAK + + F E+ ++ VS+ S+I+ +G+ EA++ +
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEM--LHRDTVSYCSIINSCCQDGLLYEAMKLIKE 138
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV-NDCQIVPDIRHYGCVVDMLGRA 421
M G P S+L+ C+ G + + F+ +V D ++ + +VDM +
Sbjct: 139 MYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 422 GRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIG 460
A V Q+ EV N+V W ++ C + N E+G
Sbjct: 199 DDHAAAFHVFDQM--EVKNEVSWTAMISGCVANQNYEMG 235
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 170/327 (51%), Gaps = 38/327 (11%)
Query: 158 HALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEV 217
H L K+G +++ T L+ MY K G +
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYG-------------------------------KTGGI 278
Query: 218 ELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPA 277
A +FD + VV+W +ID Y + + + L R+M + + ++P T + + +
Sbjct: 279 SSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM-KYEKMKPNSSTFVGLLSS 337
Query: 278 IANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNL 337
A + ++V E+ +D + AL+D+YAK G +E A F + D K++
Sbjct: 338 CAYSEAAFVGRTVADLLEEERI-ALDAILGTALVDMYAKVGLLEKAVEIFNRMKD--KDV 394
Query: 338 VSWNSLISGFAMNGMAREAVENFENMEKAG--LRPNHVAFLSVLSACSHGGLVEEGLKFF 395
SW ++ISG+ +G+AREAV F ME+ +RPN + FL VL+ACSHGGLV EG++ F
Sbjct: 395 KSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCF 454
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHN 455
+MV P + HYGCVVD+LGRAG+LEEA ++ +P ++ WR LL AC V+
Sbjct: 455 KRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI-TSDSTAWRALLAACRVYG 513
Query: 456 NVEIGQRVTEKILEIEKGHGGDYVLMS 482
N ++G+ V ++ E+ + H D +L++
Sbjct: 514 NADLGESVMMRLAEMGETHPADAILLA 540
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 43/344 (12%)
Query: 88 HNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAY 147
H ++T+L +FN +IR YS+S P +A FS+ + +LD F+F ++C+
Sbjct: 84 HVSNTNLFMFNTMIRGYSISDEPERA--FSVFNQLRAKGL----TLDRFSFITTLKSCSR 137
Query: 148 SNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR-STVTWNV 206
C G LH + + GF ++ L+ Y + G + +A +VFDEMP VT++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
+NG ++ + LAL +F MR VV V V
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVV-------------------------VNVS---- 228
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
TLL+ AI++LG + +S H K G + +D+ + ALI +Y K G I SA R
Sbjct: 229 ---TLLSFLSAISDLGDLSGAESAHVLCIKIGLD-LDLHLITALIGMYGKTGGISSARRI 284
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
F RK++V+WN +I +A G+ E V M+ ++PN F+ +LS+C++
Sbjct: 285 FD--CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
G + ++ + +I D +VDM + G LE+A ++
Sbjct: 343 AAFVG-RTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
++ TF L +CAYS G + L+ + + T L+ MY+ GLL +A ++F
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIF 386
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV------VSWTLVIDAYTRMNQ 247
+ M + +W I+G G A+++F++M + + +++ +V++A +
Sbjct: 387 NRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGL 446
Query: 248 PMKALALFRKMVEVDGIEP 266
M+ + F++MVE P
Sbjct: 447 VMEGIRCFKRMVEAYSFTP 465
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 193/371 (52%), Gaps = 41/371 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FTF + +AC + G +H + K GF + VYV L+ MY+
Sbjct: 194 DRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYA------------ 241
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G++ A +VFD + + VSW ++ Y +AL
Sbjct: 242 -------------------KCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALD 282
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+FR MV+ +GIEP +V + ++ + + K + +HG+ +RG ++ + NALI L
Sbjct: 283 IFRLMVQ-NGIEPDKVAISSVLARVLSF---KHGRQLHGWVIRRGME-WELSVANALIVL 337
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y+K G + A F ++ + ++ VSWN++IS + N ++ FE M +A +P+ +
Sbjct: 338 YSKRGQLGQACFIFDQMLE--RDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGI 392
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F+SVLS C++ G+VE+G + F+ M + I P + HY C+V++ GRAG +EEA + +Q
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
A +W LL AC +H N +IG+ +++ E+E + ++ L+ I+ R +D
Sbjct: 453 EMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512
Query: 494 AERLREVIDER 504
ER+R+++ +R
Sbjct: 513 VERVRQMMVDR 523
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 32/304 (10%)
Query: 215 GEVELALSVFDRM--RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
G E+A VFDRM RD S +W +I Y + Q A+AL+ +M E DG++P T
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE-DGVKPDRFTFP 199
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
+ A +G +++ +++H K GF D+ + NAL+ +YAKCG I A F IP
Sbjct: 200 RVLKACGGIGSVQIGEAIHRDLVKEGFGY-DVYVLNALVVMYAKCGDIVKARNVFDMIP- 257
Query: 333 WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC--------SH 384
K+ VSWNS+++G+ +G+ EA++ F M + G+ P+ VA SVL+ H
Sbjct: 258 -HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLH 316
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
G ++ G+++ + N ++ + + G+L +A + Q+ + V W
Sbjct: 317 GWVIRRGMEWELSVAN------------ALIVLYSKRGQLGQACFIFDQMLER--DTVSW 362
Query: 445 RTLLGACSVHNNVEIGQRVTEKILEIE-KGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
++ A S ++N G + E++ K G +V + ++ G +D ERL ++ +
Sbjct: 363 NAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 504 RIAI 507
I
Sbjct: 420 EYGI 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
++ I++ L+ LYA CG E A F + + +WNSLISG+A G +A+ +
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
M + G++P+ F VL AC G V+ G +V + D+ +V M + G
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG-FGYDVYVLNALVVMYAKCG 244
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMS 482
+ +A V +PH+ + V W ++L H + + L ++ G D V +S
Sbjct: 245 DIVKARNVFDMIPHK--DYVSWNSMLTGYLHHGLLHEALDIFR--LMVQNGIEPDKVAIS 300
Query: 483 NIFVGVGRYKDAERL 497
++ V +K +L
Sbjct: 301 SVLARVLSFKHGRQL 315
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 190/377 (50%), Gaps = 37/377 (9%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
F + ACA + GIQ+H L+ K+GF + YV L+ Y+ + ++ +VFDE
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
H V WT ++ Y+ + AL++F
Sbjct: 288 HEQ-------------------------------VAVWTALLSGYSLNKKHEDALSIFSG 316
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
M+ + I P + T + + + LG + + +HG A K G D + N+L+ +Y+
Sbjct: 317 MLR-NSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET-DAFVGNSLVVMYSDS 374
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G + A F +I ++K++VSWNS+I G A +G + A F M + P+ + F
Sbjct: 375 GNVNDAVSVFIKI--FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQ-IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
+LSACSH G +E+G K F M + I I+HY C+VD+LGR G+L+EAE++ ++
Sbjct: 433 LLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 437 EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAER 496
+ N+++W LL AC +H++V+ G++ I ++ YVL+SNI+ GR+ + +
Sbjct: 493 K-PNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSK 551
Query: 497 LREVIDERIAIKIPGYS 513
LR + + +K PG S
Sbjct: 552 LRVKMKKNGIMKKPGSS 568
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 137/271 (50%), Gaps = 7/271 (2%)
Query: 184 GLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT 243
G + +A ++F +MP + T WN ++G +++G+V+ AL +F +M ++V+SWT +I
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 244 RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID 303
+ + +AL LF+ M+ I+ T + A AN + VHG K GF + +
Sbjct: 202 QNERSGEALDLFKNMLRC-CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF-LYE 259
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
++ +LI YA C I + + F E + + W +L+SG+++N +A+ F M
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKV--HEQVAVWTALLSGYSLNKKHEDALSIFSGM 317
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
+ + PN F S L++CS G ++ G K + + + D +V M +G
Sbjct: 318 LRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376
Query: 424 LEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ +A V +++ + + V W +++ C+ H
Sbjct: 377 VNDAVSVFIKIFKK--SIVSWNSIIVGCAQH 405
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 46/290 (15%)
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR 228
HV + T ++ Y+ LV+A +FDEMP R V+WN I+G V+ G++ A+ +FD M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 229 DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQ 288
+RSVVSWT +++ R + +A LF +M
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAERLFYQM------------------------------ 154
Query: 289 SVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFA 348
V D N+++ Y + G ++ A + F+++P KN++SW ++I G
Sbjct: 155 -----------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG--KNVISWTTMICGLD 201
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
N + EA++ F+NM + ++ F V++AC++ G++ + ++ + +
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ-VHGLIIKLGFLYEE 260
Query: 409 RHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVE 458
++ R+ ++ KV + HE +W LL S++ E
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQV--AVWTALLSGYSLNKKHE 308
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 71/259 (27%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TFA +C+ +G ++H + K+G + +V L+ MYS G + +A VF ++
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
+S V+WN I G + G + A +F +M R+N+
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM---------------IRLNK--------- 423
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT--NALIDLY 314
EP E+T + A ++ G+++ + + Y G N ID +I ++D+
Sbjct: 424 --------EPDEITFTGLLSACSHCGFLEKGRKLFYYMSS-GINHIDRKIQHYTCMVDIL 474
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
+CG ++ A E +E+ ++PN +
Sbjct: 475 GRCGKLKEAE------------------------------------ELIERMVVKPNEMV 498
Query: 375 FLSVLSACSHGGLVEEGLK 393
+L++LSAC V+ G K
Sbjct: 499 WLALLSACRMHSDVDRGEK 517
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 184/353 (52%), Gaps = 40/353 (11%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G +H + GF H+ ++T L+ MY +
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYG-------------------------------E 377
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
G+++ A +FDRM +++V+SW +I AY + + AL LF+++ + + P T+ +
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD-SSLVPDSTTIAS 436
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGF--NVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
I PA A + + +H Y K + N I I N+L+ +YA CG +E A + F I
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTI---ILNSLVHMYAMCGDLEDARKCFNHI- 492
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
K++VSWNS+I +A++G R +V F M + + PN F S+L+ACS G+V+EG
Sbjct: 493 -LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 392 LKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
++F M + I P I HYGC++D++GR G A++ ++P V IW +LL A
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF-VPTARIWGSLLNAS 610
Query: 452 SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDER 504
H ++ I + E+I ++E + G YVL+ N++ GR++D R++ +++ +
Sbjct: 611 RNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 190/432 (43%), Gaps = 89/432 (20%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFG 154
L+N +I+ ++ +A+ F +S F DTFT+ F+ ++ A + G
Sbjct: 96 FLWNVMIKGFTSCGLYIEAVQF------YSRMVFAGVKADTFTYPFVIKSVAGISSLEEG 149
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKW 214
++HA+V K+GF VYV L+ +Y G +A +VF+EMP R V+WN I+G +
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 215 GEVELALSVFDRM------------------------------------RDR----SVVS 234
G+ +L +F M R R V+
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 235 WTLVIDAYTRMNQPMKALALFRKMV-------------------------------EVDG 263
T ++D Y++ + A +F M+ E +G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
++P +T + + PA A I +++HGYA +RGF + + + ALID+Y +CG ++SA
Sbjct: 330 LQPDVITSINLLPASA----ILEGRTIHGYAMRRGF-LPHMVLETALIDMYGECGQLKSA 384
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
F + + KN++SWNS+I+ + NG A+E F+ + + L P+ S+L A +
Sbjct: 385 EVIFDRMAE--KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
+ EG + +V + + +V M G LE+A K H + DV+
Sbjct: 443 ESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKC---FNHILLKDVV 498
Query: 444 -WRTLLGACSVH 454
W +++ A +VH
Sbjct: 499 SWNSIIMAYAVH 510
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+E AL +FD M W ++I +T ++A+ + +MV G++ T +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV-FAGVKADTFTYPFVIK 138
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
++A + ++ + +H K GF V D+ + N+LI LY K GC A + F+E+P+ ++
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE--RD 195
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+VSWNS+ISG+ G ++ F+ M K G +P+ + +S L ACSH + G +
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
V D+ ++DM + G + AE++ + N V W ++G C N
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR--NIVAWNVMIG-CYARNG 312
Query: 457 VEIGQRVTEKILEIEK 472
RVT+ L +K
Sbjct: 313 -----RVTDAFLCFQK 323
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 202/402 (50%), Gaps = 46/402 (11%)
Query: 152 RFGIQLHALVFKVGFQ------------FHVYVQTGLL--------------------QM 179
R G QLHA V G++ H+Y +GL+
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINR 377
Query: 180 YSIGGLLVEAAQVFDEMPH-RSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLV 238
Y G L A +F+ + V+W I+G ++ G+V A +F ++ D+ V+WT++
Sbjct: 378 YLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVM 437
Query: 239 IDAYTRMNQPMKALALFRKMVEVDGIEPTEVT---LLTIFPAIANLGYIKLCQSVHGYAE 295
I + +A +L MV G++P T LL+ A +NL K V A+
Sbjct: 438 ISGLVQNELFAEAASLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLDQGKHIHCV--IAK 494
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
D+ + N+L+ +YAKCG IE A F ++ +K+ VSWNS+I G + +G+A +
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV--QKDTVSWNSMIMGLSHHGLADK 552
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVV 415
A+ F+ M +G +PN V FL VLSACSH GL+ GL+ F M I P I HY ++
Sbjct: 553 ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMI 612
Query: 416 DMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH---NNVE-IGQRVTEKILEIE 471
D+LGRAG+L+EAE+ +P + ++ LLG C ++ + E I +R ++LE++
Sbjct: 613 DLLGRAGKLKEAEEFISALPF-TPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELD 671
Query: 472 KGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ +V + N++ G+GR+ + +R+ + + K PG S
Sbjct: 672 PVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCS 713
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 20/237 (8%)
Query: 160 LVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVEL 219
++F+V + ++ +L Y + EA +F EMP ++ V+W V + L G E
Sbjct: 98 VLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSED 156
Query: 220 ALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIA 279
A+ +FD M +R+VVSW ++ R KA +F M D + + I I
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAM----IKGYIE 212
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVS 339
N G + +EK NV+ +++ Y + G + A R F E+P+ +N+VS
Sbjct: 213 NDGMEEAKLLFGDMSEK---NVV---TWTSMVYGYCRYGDVREAYRLFCEMPE--RNIVS 264
Query: 340 WNSLISGFAMNGMAREAVENFENMEK--AGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
W ++ISGFA N + REA+ F M+K + PN +S+ AC GGL G++F
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC--GGL---GVEF 316
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 188 EAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ 247
EA +F +M ++ VTW + G ++G+V A +F M +R++VSWT +I +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 248 PMKALALFRKM-VEVDGIEPTEVTLLTIFPAIANLG--YIKLCQSVHGYAEKRGFNVI-- 302
+AL LF +M +VD + P TL+++ A LG + +L + +H G+ +
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH 337
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
D R+ +L+ +YA G I SA E D L S N +I+ + NG A FE
Sbjct: 338 DGRLAKSLVHMYASSGLIASAQSLLNESFD----LQSCNIIINRYLKNGDLERAETLFER 393
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
++ + V++ S++ G V F K+
Sbjct: 394 VKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 190/371 (51%), Gaps = 42/371 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +TFA + +AC+ +R G +HA + G + ++ V + L+ MY
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYG------------ 177
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM--RDRSVVSWTLVIDAYTRMNQPMKA 251
K +VE A VFD M R+VVSWT +I AY + + +A
Sbjct: 178 -------------------KCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEA 218
Query: 252 LALFRKM-VEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
+ LFR + + L ++ A ++LG ++ + HG + G+ + + +L
Sbjct: 219 IELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV-VATSL 277
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D+YAKCG + A + F I +++S+ S+I A +G+ AV+ F+ M + P
Sbjct: 278 LDMYAKCGSLSCAEKIFLRIRC--HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINP 335
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N+V L VL ACSH GLV EGL++ + M +VPD RHY CVVDMLGR GR++EA ++
Sbjct: 336 NYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYEL 395
Query: 431 ALQVPHEVAND---VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVG 487
A + EV + ++W LL A +H VEI ++++++ + Y+ +SN +
Sbjct: 396 AKTI--EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAV 453
Query: 488 VGRYKDAERLR 498
G ++D+E LR
Sbjct: 454 SGGWEDSESLR 464
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 148/323 (45%), Gaps = 38/323 (11%)
Query: 117 SIHTLNHSSTFFTYSSLDTF---TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQ 173
++H +S F D F T AFL + S F LH L K+GF
Sbjct: 8 NVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFA------ 61
Query: 174 TGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV 233
T T N + VK E+ A +FD M + +VV
Sbjct: 62 -------------------------SDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVV 96
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGY 293
SWT VI Y M +P AL++F+KM E + P E T ++F A + L ++ +++H
Sbjct: 97 SWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHAR 156
Query: 294 AEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMA 353
E G +I ++++L+D+Y KC +E+A R F + + +N+VSW S+I+ +A N
Sbjct: 157 LEISGLRR-NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARG 215
Query: 354 REAVENFENMEKA--GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY 411
EA+E F + A R N SV+SACS G ++ G K + +V +
Sbjct: 216 HEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVA 274
Query: 412 GCVVDMLGRAGRLEEAEKVALQV 434
++DM + G L AEK+ L++
Sbjct: 275 TSLLDMYAKCGSLSCAEKIFLRI 297
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 186/367 (50%), Gaps = 44/367 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
++ T+ AC+ S G Q+HAL++K G + + +++ L+ MYS G + +A +F
Sbjct: 255 NSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIF 314
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ V+ V + GL + G E A+ F RM
Sbjct: 315 ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM-------------------------- 348
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIK----LCQSVHGYAEKRGFNVIDIRITNA 309
+ VE+D + A+ + +I L + +H KR F+ + + N
Sbjct: 349 -LQAGVEIDA---------NVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG-NTFVNNG 397
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
LI++Y+KCG + + F+ +P ++N VSWNS+I+ FA +G A++ +E M ++
Sbjct: 398 LINMYSKCGDLTDSQTVFRRMP--KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
P V FLS+L ACSH GL+++G + N+M I P HY C++DMLGRAG L+EA+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 430 VALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVG 489
+P + + IW+ LLGACS H + E+G+ E++ + ++L++NI+ G
Sbjct: 516 FIDSLPLK-PDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRG 574
Query: 490 RYKDAER 496
++K+ +
Sbjct: 575 KWKERAK 581
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 7/235 (2%)
Query: 194 DEMPHRST-VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
D HR+ V WN ++ K G++ A+ +FD M R V+S +V + R +
Sbjct: 82 DADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGF 141
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
L ++M+ G + TL + + + + +H A G++ +I + N LI
Sbjct: 142 VLLKRMLGSGGFD--HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDK-EISVGNKLIT 198
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
Y KCGC S F + +N+++ ++ISG N + + + F M + + PN
Sbjct: 199 SYFKCGCSVSGRGVFDGMS--HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNS 256
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
V +LS L+ACS + EG + + ++ I ++ ++DM + G +E+A
Sbjct: 257 VTYLSALAACSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDA 310
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 17/229 (7%)
Query: 149 NCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFI 208
N G QLH+LV K F + +V GL+ MYS G L ++ VF MP R+ V+WN I
Sbjct: 371 NSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMI 430
Query: 209 NGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+ G AL +++ M V V++ ++ A + + K L +M EV GI
Sbjct: 431 AAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE--- 321
EP I + G +K +S + D +I AL+ + G E
Sbjct: 491 EPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP----DCKIWQALLGACSFHGDTEVGE 546
Query: 322 -SASRFFQEIPDWRKNLVSWNSLISG-FAMNGMAREAVENFENMEKAGL 368
+A + FQ PD S + LI+ ++ G +E + + M+ G+
Sbjct: 547 YAAEQLFQTAPDSS----SAHILIANIYSSRGKWKERAKTIKRMKAMGV 591
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 172/316 (54%), Gaps = 10/316 (3%)
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
T N I K G ++ +L +F+RM +R +VSW +I Y + KAL LF +M
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEK---RGFNVIDIRITNALIDLYAKC 317
+ T++++ A ++ G + + + +H + R +++D AL+D+Y+KC
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVD----TALVDMYSKC 496
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G +E+A R F I W K++VSW LI+G+ +G A+E + +G+ PNHV FL+
Sbjct: 497 GYLEAAQRCFDSIS-W-KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLA 554
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
VLS+CSH G+V++GLK F+ MV D + P+ H CVVD+L RA R+E+A K +
Sbjct: 555 VLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTR 614
Query: 438 VANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERL 497
+ DV+ +L AC + E+ + E ++E++ G G YV + + F + R+ D
Sbjct: 615 PSIDVL-GIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSES 673
Query: 498 REVIDERIAIKIPGYS 513
+ K+PG+S
Sbjct: 674 WNQMRSLGLKKLPGWS 689
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 162/348 (46%), Gaps = 59/348 (16%)
Query: 115 HFSIHTLNHSSTFFTYSSL-------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQ 167
H S H +H T+SS+ DTFTF L +ACA FG+ +H V GF
Sbjct: 20 HLSSHG-DHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFS 78
Query: 168 FHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM 227
Y+ + L+ +Y+ GLL A +VF+E M
Sbjct: 79 SDFYISSSLVNLYAKFGLLAHARKVFEE-------------------------------M 107
Query: 228 RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
R+R VV WT +I Y+R +A +L +M GI+P VTLL + + + +
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPGPVTLLEMLSGVLEITQL--- 163
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
Q +H +A GF+ DI + N++++LY KC + A F ++ ++++VSWN++ISG+
Sbjct: 164 QCLHDFAVIYGFDC-DIAVMNSMLNLYCKCDHVGDAKDLFDQME--QRDMVSWNTMISGY 220
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP- 406
A G E ++ M GLRP+ F + LS +E G +M++ CQIV
Sbjct: 221 ASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG-----RMLH-CQIVKT 274
Query: 407 ----DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
D+ ++ M + G+ E + +V +P++ + V W ++
Sbjct: 275 GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK--DVVCWTVMISG 320
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 150/319 (47%), Gaps = 41/319 (12%)
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
G LH + K GF ++++T L+ MY
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMY------------------------------- 290
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
+K G+ E + V + + ++ VV WT++I R+ + KAL +F +M++ G + + +
Sbjct: 291 LKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ-SGSDLSSEAI 349
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP 331
++ + A LG L SVHGY + G+ +D N+LI +YAKCG ++ + F+ +
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYT-LDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 332 DWRKNLVSWNSLISGFAMNGMAREAVENFENME-KAGLRPNHVAFLSVLSACSHGGLVEE 390
+ ++LVSWN++ISG+A N +A+ FE M+ K + + +S+L ACS G +
Sbjct: 409 E--RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV 466
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLG 449
G K + +V I P +VDM + G LE A++ + + DV+ W L+
Sbjct: 467 G-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK---DVVSWGILIA 522
Query: 450 ACSVHNNVEIGQRVTEKIL 468
H +I + + L
Sbjct: 523 GYGFHGKGDIALEIYSEFL 541
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 127 FFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLL 186
F T +D+FT L QAC+ + G +H +V + + V T L+ MYS G L
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 187 VEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAY 242
A + FD + + V+W + I G G+ ++AL ++ + V + V+ +
Sbjct: 500 EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559
Query: 243 TRMNQPMKALALFRKMVEVDGIEP 266
+ + L +F MV G+EP
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEP 583
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+ L+ F M+ + + P T ++ A A+L + S+H GF+ D I+++
Sbjct: 29 QVLSTFSSML-ANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSS-DFYISSS 86
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
L++LYAK G + A + F+E+ + +++V W ++I ++ G+ EA M G++
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRE--RDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 370 PNHVAFLSVLSA--------CSHGGLVEEGLKFFNKMVNDCQI--VPDIRHYGCVVDMLG 419
P V L +LS C H V G DC I + + + C D +G
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAVIYGF--------DCDIAVMNSMLNLYCKCDHVG 196
Query: 420 RAGRLEEAEKVALQVPHEVANDVIWRTLL-GACSVHNNVEI 459
A L + E + V W T++ G SV N EI
Sbjct: 197 DAKDLFD--------QMEQRDMVSWNTMISGYASVGNMSEI 229
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 188/413 (45%), Gaps = 64/413 (15%)
Query: 130 YSSLDTFTFAFLS-------------QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGL 176
Y +LD F FL+ AC+ G ++H++ K+GF V V L
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 177 LQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRD------- 229
+ MYS G L +A +VFD + ++ TWN I G + G A +F RM+D
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 230 ---------------------------------RSVVSWTLVIDAYTRMNQPMKALALFR 256
R+ +W L+I Y + + +AL LFR
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
KM + P VT+L++ PA ANL K+ + +HG +R + I + NAL D YAK
Sbjct: 514 KM-QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA-VKNALTDTYAK 571
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
G IE + F + K++++WNSLI G+ ++G A+ F M+ G+ PN
Sbjct: 572 SGDIEYSRTIFLGME--TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 629
Query: 377 SVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH 436
S++ A G V+EG K F + ND I+P + H +V + GRA RLEE ALQ
Sbjct: 630 SIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEE----ALQFIQ 685
Query: 437 EV---ANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFV 486
E+ + IW + L C +H ++++ E + +E + ++S I+
Sbjct: 686 EMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA 738
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 163/360 (45%), Gaps = 45/360 (12%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D F F + Q CA G +H++V K+G + V +L +Y+ G L A + F
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 194 DEMPHRST-----------------------------------VTWNVFINGLVKWGEVE 218
M R VTWN+ I G + G+ +
Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 219 LALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
A+ + +M V +WT +I +AL +FRKM + G+ P VT+++
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF-LAGVVPNAVTIMSA 358
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A + L I VH A K GF + D+ + N+L+D+Y+KCG +E A + F + +
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-- 415
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
K++ +WNS+I+G+ G +A E F M+ A LRPN + + +++S G E +
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Query: 395 FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACS 452
F +M D ++ + + ++ + G+ +EA ++ +Q + N V +LL AC+
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 46/387 (11%)
Query: 124 SSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIG 183
S F S + T+ L ++C S G LHA F + + V+V+T LL MY+
Sbjct: 70 DSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKC 128
Query: 184 GLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT 243
G + +A +VFD MR+R++ +W+ +I AY+
Sbjct: 129 GCIADARKVFDS-------------------------------MRERNLFTWSAMIGAYS 157
Query: 244 RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID 303
R N+ + LFR M++ DG+ P + I AN G ++ + +H K G +
Sbjct: 158 RENRWREVAKLFRLMMK-DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC- 215
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
+R++N+++ +YAKCG ++ A++FF+ + + +++++WNS++ + NG EAVE + M
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRE--RDVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
EK G+ P V + ++ + G + + KM I D+ + ++ L G
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGM 332
Query: 424 LEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLM 481
+A + + + V N V + + ACS + G V + ++ G D VL+
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS--IAVKMGFIDD-VLV 389
Query: 482 SNIFVGV----GRYKDAERLREVIDER 504
N V + G+ +DA ++ + + +
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNK 416
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 194/380 (51%), Gaps = 39/380 (10%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT A AC + G Q+H V + +VQ L+ MYS
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYS------------ 450
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G V+ A +VF++++ RSVV+W ++ +++ ++A++
Sbjct: 451 -------------------KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF M +E EVT L + A +++G ++ + VH G D+ ALID+
Sbjct: 492 LFDYMYH-SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK--DLFTDTALIDM 548
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAKCG + +A F+ + +++VSW+S+I+ + M+G A+ F M ++G +PN V
Sbjct: 549 YAKCGDLNAAETVFRAMS--SRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F++VLSAC H G VEEG +FN M + P+ H+ C +D+L R+G L+EA + +
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKE 665
Query: 434 VPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKD 493
+P +A+ +W +L+ C +H ++I + + + +I G Y L+SNI+ G +++
Sbjct: 666 MPF-LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEE 724
Query: 494 AERLREVIDERIAIKIPGYS 513
RLR + K+PGYS
Sbjct: 725 FRRLRSAMKSSNLKKVPGYS 744
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 160/320 (50%), Gaps = 40/320 (12%)
Query: 131 SSLDTFTFAFLSQACAYSNC-TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEA 189
+ + F F + +ACA S G ++H + K G ++T LL MY G L +A
Sbjct: 96 TQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDA 155
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM 249
+VFD MP R V W+ ++ ++ GEV +
Sbjct: 156 EKVFDGMPVRDLVAWSTLVSSCLENGEV-------------------------------V 184
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
KAL +F+ MV+ DG+EP VT++++ A LG +++ +SVHG ++ F+ +D + N+
Sbjct: 185 KALRMFKCMVD-DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD-LDETLCNS 242
Query: 310 LIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLR 369
L+ +Y+KCG + S+ R F++I +KN VSW ++IS + + +A+ +F M K+G+
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIA--KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYG-CVVDMLGRAGRLEEAE 428
PN V SVLS+C GL+ EG V ++ P+ +V++ G+L + E
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR-ELDPNYESLSLALVELYAECGKLSDCE 359
Query: 429 KVALQVPHEVANDVIWRTLL 448
V V N V W +L+
Sbjct: 360 TVLRVVSDR--NIVAWNSLI 377
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 38/323 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + + CA C R +H + + F + LL MYS G L+ + ++F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+++ ++ V SWT +I +Y R KAL
Sbjct: 261 EKIAKKNAV-------------------------------SWTAMISSYNRGEFSEKALR 289
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
F +M++ GIEP VTL ++ + +G I+ +SVHG+A +R + ++ AL++L
Sbjct: 290 SFSEMIK-SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 348
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YA+CG + + + D +N+V+WNSLIS +A GM +A+ F M ++P+
Sbjct: 349 YAECGKLSDCETVLRVVSD--RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
S +SAC + GLV G + ++ V D ++DM ++G ++ A V Q
Sbjct: 407 TLASSISACENAGLVPLGKQIHGHVIR--TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQ 464
Query: 434 VPHEVANDVIWRTLLGACSVHNN 456
+ H V W ++L S + N
Sbjct: 465 IKHRSV--VTWNSMLCGFSQNGN 485
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 38/256 (14%)
Query: 175 GLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVS 234
L+++Y+ G L + V + R+ V WN I+
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS------------------------- 378
Query: 235 WTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYA 294
Y ++AL LFR+MV I+P TL + A N G + L + +HG+
Sbjct: 379 ------LYAHRGMVIQALGLFRQMV-TQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 295 EKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAR 354
+ +V D + N+LID+Y+K G ++SAS F +I +++V+WNS++ GF+ NG +
Sbjct: 432 IRT--DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK--HRSVVTWNSMLCGFSQNGNSV 487
Query: 355 EAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCV 414
EA+ F+ M + L N V FL+V+ ACS G +E+G +K++ + D+ +
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI--ISGLKDLFTDTAL 545
Query: 415 VDMLGRAGRLEEAEKV 430
+DM + G L AE V
Sbjct: 546 IDMYAKCGDLNAAETV 561
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 238/538 (44%), Gaps = 105/538 (19%)
Query: 70 VHQVHSHITTSGLFHHPFHNTS-----------------------TSLLLFNNIIRCYSL 106
++HS +T S L P+ T S+ L+N+IIR Y+
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA- 82
Query: 107 SPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGF 166
+A F+ S + + D FT+A L++ + S T+ +H + G
Sbjct: 83 -----KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGL 137
Query: 167 QFHVYVQTGLLQMYSIGGLLVEAAQV-------------------------------FDE 195
F + +++ YS GL+VEA+++ F+
Sbjct: 138 GFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNL 197
Query: 196 MPHRS---------------------TVTWNV------------------FINGLVKWGE 216
M HR V W+V +N +
Sbjct: 198 MQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMC 257
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+ A SVF+ + + +V+ + +I Y+R +AL LF ++ + G +P V + +
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL-RMSGKKPDCVLVAIVLG 316
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
+ A L + VH Y + G +DI++ +ALID+Y+KCG ++ A F IP+ KN
Sbjct: 317 SCAELSDSVSGKEVHSYVIRLGLE-LDIKVCSALIDMYSKCGLLKCAMSLFAGIPE--KN 373
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+VS+NSLI G ++G A A E F + + GL P+ + F ++L C H GL+ +G + F
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
+M ++ I P HY +V ++G AG+LEEA + + + + + ++ LL C VH N
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGIL-GALLSCCEVHEN 492
Query: 457 VEIGQRVTEKILEIEKGHGGDY-VLMSNIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
+ + V E I + + Y V++SN++ GR+ + ERLR+ I E K+PG S
Sbjct: 493 THLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 43/405 (10%)
Query: 93 SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTR 152
+L+ +N++I + +AI + + F + L+ + + S + ++
Sbjct: 225 NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSK 284
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYS-IGGLLVEAAQVFDEMPH-RSTVTWNVFING 210
+QLH+L K G V T L+++YS + + ++F EM H R V WN I
Sbjct: 285 CCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIIT- 343
Query: 211 LVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVT 270
A +V+D P +A+ LF ++ + + + P T
Sbjct: 344 ---------AFAVYD----------------------PERAIHLFGQLRQ-EKLSPDWYT 371
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
++ A A L + S+H K GF + D + N+LI YAKCG ++ R F ++
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKGGF-LADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
+++VSWNS++ ++++G + F+ M+ + P+ F+++LSACSH G VEE
Sbjct: 431 DS--RDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEE 485
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
GL+ F M + +P + HY CV+DML RA R EAE+V Q+P + + V+W LLG+
Sbjct: 486 GLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD-PDAVVWIALLGS 544
Query: 451 CSVHNNVEIGQRVTEKILE-IEKGHGGDYVLMSNIFVGVGRYKDA 494
C H N +G+ +K+ E +E + Y+ MSNI+ G + +A
Sbjct: 545 CRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N IN K G + A VFD M +R+VVSWT +I Y + + LF M +
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM--LSHC 157
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC---GCIE 321
P E TL ++ + + + VHG A K G + I + NA+I +Y +C
Sbjct: 158 FPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHC-SIYVANAVISMYGRCHDGAAAY 212
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
A F+ I KNLV+WNS+I+ F + ++A+ F M G+ + L++ S+
Sbjct: 213 EAWTVFEAIK--FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 52/350 (14%)
Query: 122 NHSSTFFTYSSL------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTG 175
N F +SS+ + FT + + +C Y G Q+H L K+G +YV
Sbjct: 142 NEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANA 197
Query: 176 LLQMYS---IGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV 232
++ MY G EA VF+ + ++ VTWN I + A+ VF RM V
Sbjct: 198 VISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV 257
Query: 233 VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHG 292
D T +N + + + + P EV+ K C +H
Sbjct: 258 -----GFDRATLLN-------ICSSLYKSSDLVPNEVS--------------KCCLQLHS 291
Query: 293 YAEKRGFNVIDIRITNALIDLYAKCGCIESAS---RFFQEIPDWRKNLVSWNSLISGFAM 349
K G V + ALI +Y++ +E + + F E+ R ++V+WN +I+ FA+
Sbjct: 292 LTVKSGL-VTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCR-DIVAWNGIITAFAV 347
Query: 350 NGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIR 409
R A+ F + + L P+ F SVL AC+ L +++ + D
Sbjct: 348 YDPER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG-GFLADTV 405
Query: 410 HYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLGACSVHNNVE 458
++ + G L+ +V + + DV+ W ++L A S+H V+
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMD---SRDVVSWNSMLKAYSLHGQVD 452
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 189/379 (49%), Gaps = 39/379 (10%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TF L A + + G+++H L K GF V + +Y+ L +A + F+++
Sbjct: 374 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
R ++WN I+G + G AL +F S + T+
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMF-----LSAAAETM------------------- 469
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYI--KLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
P E T ++ AIA I K Q H + K G N + +++AL+D+Y
Sbjct: 470 ---------PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV-VSSALLDMY 519
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
AK G I+ + + F E+ +KN W S+IS ++ +G + F M K + P+ V
Sbjct: 520 AKRGNIDESEKVFNEMS--QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
FLSVL+AC+ G+V++G + FN M+ + P HY C+VDMLGRAGRL+EAE++ +V
Sbjct: 578 FLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDA 494
P ++ +++LG+C +H NV++G +V E +E++ G YV M NI+ + A
Sbjct: 638 PGGPGESML-QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKA 696
Query: 495 ERLREVIDERIAIKIPGYS 513
+R+ + ++ K G+S
Sbjct: 697 AEIRKAMRKKNVSKEAGFS 715
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 168/388 (43%), Gaps = 70/388 (18%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
LD +F + C + + Q+H L K G++ + V L+ YS G+L V
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSV 333
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F +M R+ V+W I+ + A+S+F MR
Sbjct: 334 FHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMR------------------------ 364
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
DG+ P EVT + + A+ IK +HG K GF V + + N+ I
Sbjct: 365 --------FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGF-VSEPSVGNSFIT 415
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
LYAK +E A + F++I + ++SWN++ISGFA NG + EA++ F + A PN
Sbjct: 416 LYAKFEALEDAKKAFEDIT--FREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNE 472
Query: 373 VAFLSVLSACS-------------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLG 419
F SVL+A + H L++ GL N C +V ++DM
Sbjct: 473 YTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL-------NSCPVVSS-----ALLDMYA 520
Query: 420 RAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYV 479
+ G ++E+EKV ++ + N +W +++ A S H + E + K+ I++ D V
Sbjct: 521 KRGNIDESEKVFNEMSQK--NQFVWTSIISAYSSHGDFETVMNLFHKM--IKENVAPDLV 576
Query: 480 LMSNIFVGVGRYKDAERLREVIDERIAI 507
++ R ++ E+ + I +
Sbjct: 577 TFLSVLTACNRKGMVDKGYEIFNMMIEV 604
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 41/262 (15%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D FT++ C S G+QL + V K G + + V + MYS
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYS----------- 220
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ-PMKA 251
+ G A VFD M + ++SW ++ ++ +A
Sbjct: 221 --------------------RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
+ +FR M+ +G+E V+ ++ + +KL + +HG KRG+ + + + N L+
Sbjct: 261 VVIFRDMMR-EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL-LEVGNILM 318
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
Y+KCG +E+ F ++ + +N+VSW ++IS +AV F NM G+ PN
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSE--RNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPN 371
Query: 372 HVAFLSVLSACSHGGLVEEGLK 393
V F+ +++A ++EGLK
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLK 393
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 41/253 (16%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D T +AC + G Q+H GF V V ++ MY G A +
Sbjct: 76 MDEVTLCLALKACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 133
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F+ + V+WN ++G + + ++AL+ RM+ VV DA+T AL
Sbjct: 134 FENLVDPDVVSWNTILSG---FDDNQIALNFVVRMKSAGVV-----FDAFTYST----AL 181
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+ + + G++ L + K G D+ + N+ I
Sbjct: 182 SF----------------------CVGSEGFL-LGLQLQSTVVKTGLES-DLVVGNSFIT 217
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG-MAREAVENFENMEKAGLRPN 371
+Y++ G A R F E+ K+++SWNSL+SG + G EAV F +M + G+ +
Sbjct: 218 MYSRSGSFRGARRVFDEMS--FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELD 275
Query: 372 HVAFLSVLSACSH 384
HV+F SV++ C H
Sbjct: 276 HVSFTSVITTCCH 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 219 LALSVFDRMRDR-SVVSWTLVIDAYTRMNQPMKALALFRKMVEVD--GIEPTEVTLLTIF 275
+A +FD R + S I R N P +AL++F++ +++ G EVTL
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
A G +K +HG++ GF + ++NA++ +Y K G ++A F+ + D
Sbjct: 86 KACR--GDLKRGCQIHGFSTTSGFTSF-VCVSNAVMGMYRKAGRFDNALCIFENLVD--P 140
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC--SHGGLVEEGLK 393
++VSWN+++SGF N +A V M+ AG+ + + + LS C S G L+ GL+
Sbjct: 141 DVVSWNTILSGFDDNQIALNFV---VRMKSAGVVFDAFTYSTALSFCVGSEGFLL--GLQ 195
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLGACS 452
+ +V + D+ + M R+G A +V ++ + D+I W +LL S
Sbjct: 196 LQSTVVK-TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK---DMISWNSLLSGLS 251
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 90 TSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
T ++ +N +I ++ + F H+A+ + + + +TF + A A++
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-------NEYTFGSVLNAIAFAE 486
Query: 150 --CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVF 207
+ G + HA + K+G V + LL MY+ G + E+ +VF+EM ++ W
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 208 INGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
I+ G+ E +++F +M +V V++ V+ A R K +F M+EV
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606
Query: 264 IEPT 267
+EP+
Sbjct: 607 LEPS 610
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEV 261
V N ++ +V+ A +V M+ R +++T ++ + + + AL++ M
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG- 521
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
DGI +++L A ANLG ++ + +H Y+ K GF+ + N+L+D+Y+KCG +E
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA-ASVLNSLVDMYSKCGSLE 580
Query: 322 SASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVL 379
A + F+EI PD +VSWN L+SG A NG A+ FE M P+ V FL +L
Sbjct: 581 DAKKVFEEIATPD----VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILL 636
Query: 380 SACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVA 439
SACS+G L + GL++F M I P + HY +V +LGRAGRLEEA V ++ H
Sbjct: 637 SACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV-VETMHLKP 695
Query: 440 NDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE 499
N +I++TLL AC N+ +G+ + K L + Y+L+++++ G+ + A++ R
Sbjct: 696 NAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRN 755
Query: 500 VIDERIAIKIPGYS 513
++ E+ K G S
Sbjct: 756 LMTEKRLSKKLGKS 769
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 152/354 (42%), Gaps = 66/354 (18%)
Query: 148 SNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVF 207
SN +R G+ +H V K G ++ + LL +Y + A ++FDEM H
Sbjct: 36 SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH--------- 86
Query: 208 INGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
R+V +WT++I A+T+ + AL+LF +M+ G P
Sbjct: 87 ----------------------RTVFAWTVMISAFTKSQEFASALSLFEEMM-ASGTHPN 123
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
E T ++ + A L I VHG K GF + + ++L DLY+KCG + A F
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV-VGSSLSDLYSKCGQFKEACELF 182
Query: 328 QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS---- 383
+ + + +SW +IS REA++ + M KAG+ PN F+ +L A S
Sbjct: 183 SSLQN--ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 384 ------HGGLVEEGLKF--------------FNKMVNDCQIV-----PDIRHYGCVVDML 418
H ++ G+ F+KM + +++ D+ + VV
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 419 GRAGRLEEAEKVALQVPH--EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEI 470
R R +EA L++ N+ + +L CS +++ G+++ + +++
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 36/250 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FTF+ + ++CA +G ++H V K GF+ + V + L +YS G EA ++F
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
+ + T+ SWT++I + + +AL
Sbjct: 183 SSLQNADTI-------------------------------SWTMMISSLVGARKWREALQ 211
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+ +MV+ G+ P E T + + A + LG ++ +++H RG +++ + +L+D
Sbjct: 212 FYSEMVKA-GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIP-LNVVLKTSLVDF 268
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y++ +E A R + +++ W S++SGF N A+EAV F M GL+PN+
Sbjct: 269 YSQFSKMEDAVRVLNSSGE--QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 374 AFLSVLSACS 383
+ ++LS CS
Sbjct: 327 TYSAILSLCS 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 20/267 (7%)
Query: 127 FFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLL 186
F + + DT ++ + + + R +Q ++ + K G + + LL S GL
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL- 240
Query: 187 VEAAQVFDEMPHRSTVTWNVFINGLVK---------WGEVELALSVFDRMRDRSVVSWTL 237
F + H + + + +N ++K + ++E A+ V + ++ V WT
Sbjct: 241 -----EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTS 295
Query: 238 VIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKR 297
V+ + R + +A+ F +M + G++P T I + + + + +H K
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 298 GFNVIDIRITNALIDLYAKCGCIE-SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREA 356
GF + NAL+D+Y KC E ASR F + N+VSW +LI G +G ++
Sbjct: 355 GFE-DSTDVGNALVDMYMKCSASEVEASRVFGAMVS--PNVVSWTTLILGLVDHGFVQDC 411
Query: 357 VENFENMEKAGLRPNHVAFLSVLSACS 383
M K + PN V VL ACS
Sbjct: 412 FGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 41/310 (13%)
Query: 126 TFFTYSSL----DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMY- 180
TF SL + FT++ + C+ FG Q+H+ KVGF+ V L+ MY
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 181 SIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVID 240
VEA++VF M V+ NV VSWT +I
Sbjct: 372 KCSASEVEASRVFGAM-----VSPNV--------------------------VSWTTLIL 400
Query: 241 AYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN 300
L +MV+ + +EP VTL + A + L +++ +H Y +R +
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKRE-VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENF 360
++ + N+L+D YA ++ A + + R++ +++ SL++ F G A+
Sbjct: 460 G-EMVVGNSLVDAYASSRKVDYAWNVIRSMK--RRDNITYTSLVTRFNELGKHEMALSVI 516
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGR 420
M G+R + ++ +SA ++ G +E G K + +VDM +
Sbjct: 517 NYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSGAASVLNSLVDMYSK 575
Query: 421 AGRLEEAEKV 430
G LE+A+KV
Sbjct: 576 CGSLEDAKKV 585
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D + A A G LH K GF V L+ MYS G L +A +V
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQP 248
F+E+ V+WN ++GL G + ALS F+ MR + V++ +++ A +
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLT 645
Query: 249 MKALALFRKMVEVDGIEP 266
L F+ M ++ IEP
Sbjct: 646 DLGLEYFQVMKKIYNIEP 663
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 211/424 (49%), Gaps = 53/424 (12%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T A L A A + + G ++ + F+ + + + ++ MY+ G +V+A +VF
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 194 DEMPHR-----------------------------------STVTWNVFINGLVKWGEVE 218
D + + +TWN+ I L++ G+V+
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 219 LALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
A +F +M+ ++ SWT +++ + +A+ RKM E G+ P ++
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE-SGLRPNAFSITVA 552
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA-----SRFFQE 329
A A+L + + +++HGY + + + I +L+D+YAKCG I A S+ + E
Sbjct: 553 LSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 330 IPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVE 389
+P N++IS +A+ G +EA+ + ++E GL+P+++ +VLSAC+H G +
Sbjct: 613 LP-------LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDIN 665
Query: 390 EGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLG 449
+ ++ F +V+ + P + HYG +VD+L AG E+A ++ ++P + +I ++L+
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMI-QSLVA 724
Query: 450 ACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
+C+ E+ ++ K+LE E + G+YV +SN + G + + ++RE++ + K
Sbjct: 725 SCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK 784
Query: 510 PGYS 513
PG S
Sbjct: 785 PGCS 788
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D F + +AC +RFG +H V K G + V+V + L MY G+L +A++VF
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
DE+P R+ V WN + G V+ G+ E A+ +F MR +
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ----------------------- 268
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
G+EPT VT+ T A AN+G ++ + H A G + +I + +L++
Sbjct: 269 ---------GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLLNF 318
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y K G IE A F + + K++V+WN +ISG+ G+ +A+ + M L+ + V
Sbjct: 319 YCKVGLIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDC---QIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+++SA + E LK ++ C DI V+DM + G + +A+KV
Sbjct: 377 TLATLMSAAAR----TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 431 ALQVPHEVANDVI-WRTLLGA 450
V D+I W TLL A
Sbjct: 433 ---FDSTVEKDLILWNTLLAA 450
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 37/251 (14%)
Query: 143 QACAYSNCTRFGIQLHALVFKVG--FQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS 200
Q C Y G Q+HA + K G + + Y++T L+ Y+
Sbjct: 78 QGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYA------------------- 118
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
K +E+A +F ++R R+V SW +I R+ AL F +M+E
Sbjct: 119 ------------KCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
+ I P + + A L + + + VHGY K G + + ++L D+Y KCG +
Sbjct: 167 -NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC-VFVASSLADMYGKCGVL 224
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ AS+ F EIPD +N V+WN+L+ G+ NG EA+ F +M K G+ P V + LS
Sbjct: 225 DDASKVFDEIPD--RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 381 ACSHGGLVEEG 391
A ++ G VEEG
Sbjct: 283 ASANMGGVEEG 293
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 36/274 (13%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
G Q HA+ G + + T LL Y GL+ A VFD M + VTWN+ I+G V+
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
G VE A+ + MR ++ ++ VTL T
Sbjct: 353 QGLVEDAIYMCQLMR--------------------------------LEKLKYDCVTLAT 380
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
+ A A +KL + V Y + F DI + + ++D+YAKCG I A + F +
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFES-DIVLASTVMDMYAKCGSIVDAKKVFDSTVE- 438
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
K+L+ WN+L++ +A +G++ EA+ F M+ G+ PN + + ++ + G V+E
Sbjct: 439 -KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
F +M I+P++ + +++ + + G EEA
Sbjct: 498 MFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 288 QSVHGYAEKRG-FNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ +H K G F + I L+ YAKC +E A F ++ +N+ SW ++I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR--VRNVFSWAAIIGV 147
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS-----------HGGLVEEGLKFF 395
G+ A+ F M + + P++ +V AC HG +V+ GL+
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE-- 205
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
DC V + DM G+ G L++A KV ++P N V W L+
Sbjct: 206 -----DCVFVAS-----SLADMYGKCGVLDDASKVFDEIPDR--NAVAWNALM 246
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 206/433 (47%), Gaps = 47/433 (10%)
Query: 81 GLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAF 140
G H+P +L+ +N+II S + F QA+ L S+ D +TF+
Sbjct: 359 GRIHNP------NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP-----RPDEYTFSA 407
Query: 141 LSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS 200
A A G LH V K+G++ V+V T LL MY A +VFD M R
Sbjct: 408 AISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERD 467
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
V W I G + G ELA+ F + ++R+
Sbjct: 468 VVLWTEMIVGHSRLGNSELAVQFF---------------------------IEMYREKNR 500
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
DG +L ++ A +++ ++ + H A + GF+ + + + AL+D+Y K G
Sbjct: 501 SDGF-----SLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV-MSVCGALVDMYGKNGKY 554
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
E+A F + +L WNS++ ++ +GM +A+ FE + + G P+ V +LS+L+
Sbjct: 555 ETAETIFSLASN--PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
ACSH G +G +N+M + I +HY C+V+++ +AG ++EA ++ Q P
Sbjct: 613 ACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ 671
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREV 500
+WRTLL AC N++IG E+IL+++ ++L+SN++ GR++D +R
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRK 731
Query: 501 IDERIAIKIPGYS 513
I + K PG S
Sbjct: 732 IRGLASSKDPGLS 744
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 49/300 (16%)
Query: 97 FNNIIRCYSLSP-FPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGI 155
+N + YS +P F A + H F Y ++ TF L Q CA G
Sbjct: 166 YNALYSAYSRNPDFASYAFPLTTHMA------FEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWG 215
L++ + K+G+ +V VQT +L MYS G L A ++FD + +R V WN I G +K
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 216 EVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIF 275
++E L FR M+ + G++PT+ T +
Sbjct: 280 KIE-------------------------------DGLMFFRNML-MSGVDPTQFTYSIVL 307
Query: 276 PAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
+ LG L + +H ++ D+ + NAL+D+Y CG + A F I +
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSD-SLADLPLDNALLDMYCSCGDMREAFYVFGRIHN--P 364
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGL-RPNHVAFLSVLSACS------HGGLV 388
NLVSWNS+ISG + NG +A+ + + + RP+ F + +SA + HG L+
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 40/347 (11%)
Query: 141 LSQACAYSNCTRFGIQLHALVFKVGFQFHV---YVQTGLLQMYSIGGLLVEAAQVFDEMP 197
L++ C + Q+HALV G Y L+ MY G L +A +VFD+MP
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 198 HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRK 257
HR+ V++N S + R D + ++ L
Sbjct: 160 HRNVVSYNAL-------------YSAYSRNPDFASYAFPLTTH----------------- 189
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
+ + ++P T ++ A L + + S++ K G++ ++ + +++ +Y+ C
Sbjct: 190 -MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYS-DNVVVQTSVLGMYSSC 247
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G +ESA R F + + ++ V+WN++I G N + + F NM +G+ P +
Sbjct: 248 GDLESARRIFDCVNN--RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSI 305
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
VL+ CS G G K + + + D+ ++DM G + EA V ++ +
Sbjct: 306 VLNGCSKLGSYSLG-KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN- 363
Query: 438 VANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNI 484
N V W +++ CS + E + ++L + +Y + I
Sbjct: 364 -PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 212/442 (47%), Gaps = 49/442 (11%)
Query: 75 SHITTSGLFHHPFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLD 134
S I + +FH ++S+ ++N+++ + ++ A+ + F D
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF------D 341
Query: 135 TFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
++T + + C R G+Q+H+LV G++ V + L+ +++ G + +A ++F
Sbjct: 342 SYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFH 401
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
+P++ + ++ I G VK G LA +F R ++ L D + N
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLF-----RELIKLGLDADQFIVSN-------- 448
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
+L + ++A+LG+ K +HG K+G+ + T AL+D+Y
Sbjct: 449 ----------------ILKVCSSLASLGWGK---QIHGLCIKKGYESEPVTAT-ALVDMY 488
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
KCG I++ F + + +++VSW +I GF NG EA F M G+ PN V
Sbjct: 489 VKCGEIDNGVVLFDGMLE--RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 375 FLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
FL +LSAC H GL+EE M ++ + P + HY CVVD+LG+AG +EA ++ ++
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGD---YVLMSNIFVGVGRY 491
P E + IW +LL AC H N + + EK+L KG D Y +SN + +G +
Sbjct: 607 PLE-PDKTIWTSLLTACGTHKNAGLVTVIAEKLL---KGFPDDPSVYTSLSNAYATLGMW 662
Query: 492 KDAERLREVIDERIAIKIPGYS 513
++RE +++ K G S
Sbjct: 663 DQLSKVREAA-KKLGAKESGMS 683
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 10/269 (3%)
Query: 84 HHPFHNTST-SLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLS 142
H F S +++ + ++ Y+ P++AI L+ + + F ++ +
Sbjct: 60 HKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEE-----EAANEFMYSAVL 114
Query: 143 QACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV 202
+AC + GI ++ + K + V + ++ MY G L+EA F E+ S+
Sbjct: 115 KACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSST 174
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
+WN I+G K G ++ A+++F RM +VVSW +I + P +AL +M + +
Sbjct: 175 SWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRM-QRE 232
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC-IE 321
G+ L A + G + + + +H K G I+ ALID+Y+ CG I
Sbjct: 233 GLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAIS-ALIDMYSNCGSLIY 291
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMN 350
+A F QE ++ WNS++SGF +N
Sbjct: 292 AADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 140/341 (41%), Gaps = 78/341 (22%)
Query: 145 CAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTW 204
C + G + A V K G +V++ ++ MY LL +A +VFDE
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDE--------- 65
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
M +R++V+WT ++ YT +P KA+ L+R+M++ +
Sbjct: 66 ----------------------MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVH---GYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
E + A +G I+L V+ G RG D+ + N+++D+Y K G +
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG----DVVLMNSVVDMYVKNGRLI 159
Query: 322 SASRFFQEI-----PDW------------------------RKNLVSWNSLISGFAMNGM 352
A+ F+EI W + N+VSWN LISGF G
Sbjct: 160 EANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS 219
Query: 353 AREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRH-- 410
R A+E M++ GL + A L ACS GGL+ G K ++ C + +
Sbjct: 220 PR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG-----KQLHCCVVKSGLESSP 273
Query: 411 --YGCVVDMLGRAGRLEEAEKVALQVPHEVANDV-IWRTLL 448
++DM G L A V Q V + V +W ++L
Sbjct: 274 FAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 37/385 (9%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FTF L +A C +LH L K+GF
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFG-------------------------- 246
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQ-PMKAL 252
RS+ +N VK G + A + + + R ++S T +I +++ N A
Sbjct: 247 -----RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+F+ M+ + + EV + ++ + + + + +HG+A K D+ + N+LID
Sbjct: 302 DIFKDMIRMK-TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAK G IE A F+E+ + K++ SW SLI+G+ +G +A++ + ME ++PN
Sbjct: 361 MYAKSGEIEDAVLAFEEMKE--KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
V FLS+LSACSH G E G K ++ M+N I H C++DML R+G LEEA +
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Query: 433 QVPHEVA-NDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
V+ + W L AC H NV++ + ++L +E +Y+ +++++ G +
Sbjct: 479 SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAW 538
Query: 492 KDAERLREVIDERIAI-KIPGYSLL 515
+A R+++ E + K PGYSL+
Sbjct: 539 DNALNTRKLMKESGSCNKAPGYSLV 563
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 4/177 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
++ I+ +K G+V+ A +FDR+ R VVSWT +I ++R AL LF++M D +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED-V 109
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+ + T ++ + +LG +K +HG EK G ++ + +AL+ LYA+CG +E A
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK-GNCAGNLIVRSALLSLYARCGKMEEAR 168
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
F + + ++LVSWN++I G+ N A + F+ M G +P+ F S+L A
Sbjct: 169 LQFDSMKE--RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 159/374 (42%), Gaps = 79/374 (21%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ FT+ + ++C C + G+Q+H V K ++ V++ LL +Y+ G + EA F
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D M R V+WN I+G YT + +
Sbjct: 172 DSMKERDLVSWNAMIDG-------------------------------YTANACADTSFS 200
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
LF+ M+ +G +P T ++ A + +++ +HG A K GF I +L++
Sbjct: 201 LFQLML-TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI-RSLVNA 258
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFA-MNGMAREAVENFENMEKAGLRPNH 372
Y KCG + +A + + +++L+S +LI+GF+ N +A + F++M + + +
Sbjct: 259 YVKCGSLANAWKLHEGTK--KRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDE 316
Query: 373 VAFLSVLSACS-----------HG-------------------------GLVEEGLKFFN 396
V S+L C+ HG G +E+ + F
Sbjct: 317 VVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFE 376
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGACSVH 454
+M D+R + ++ GR G E+A + ++ HE NDV + +LL ACS
Sbjct: 377 EMKE-----KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHT 431
Query: 455 NNVEIGQRVTEKIL 468
E+G ++ + ++
Sbjct: 432 GQTELGWKIYDTMI 445
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 290 VHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAM 349
+HG + GF ++++ + LIDLY K G ++ A + F I ++++VSW ++IS F+
Sbjct: 34 IHGNSITNGF-CSNLQLKDMLIDLYLKQGDVKHARKLFDRIS--KRDVVSWTAMISRFSR 90
Query: 350 NGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIR 409
G +A+ F+ M + ++ N + SVL +C G ++EG++ V ++
Sbjct: 91 CGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS-VEKGNCAGNLI 149
Query: 410 HYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLL 448
++ + R G++EEA LQ D++ W ++
Sbjct: 150 VRSALLSLYARCGKMEEAR---LQFDSMKERDLVSWNAMI 186
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 177/339 (52%), Gaps = 37/339 (10%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D+ T + Q CA+ + G ++ + K GF +V L+ M++ L A +F
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF 560
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
D+ ++S VSW ++++ Y Q +A+A
Sbjct: 561 DKCGF------------------------------EKSTVSWNIMMNGYLLHGQAEEAVA 590
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
FR+M +V+ +P VT + I A A L +++ SVH + GF + N+L+D+
Sbjct: 591 TFRQM-KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF-CSQTPVGNSLVDM 648
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAKCG IES+ + F EI + K +VSWN+++S +A +G+A AV F +M++ L+P+ V
Sbjct: 649 YAKCGMIESSEKCFIEISN--KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSV 706
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
+FLSVLSAC H GLVEEG + F +M +I ++ HY C+VD+LG+AG EA V +
Sbjct: 707 SFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEA--VEMM 764
Query: 434 VPHEVANDV-IWRTLLGACSVHNNVEIGQRVTEKILEIE 471
V V +W LL + +H N+ + +++++E
Sbjct: 765 RRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLE 803
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 185/404 (45%), Gaps = 76/404 (18%)
Query: 72 QVHSHITTSGLFHHP--------FHNTSTS-----------LLLFNNIIRCYSLSPFPHQ 112
QVH + SGL H F S ++L+N++IR Y+ + +
Sbjct: 23 QVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHRE 82
Query: 113 AIHFSIHTLNHSSTFFTYSSL------DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGF 166
A+ FF Y S D ++F F +ACA S + G+++H L+ ++G
Sbjct: 83 AL-----------GFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL 131
Query: 167 QFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDR 226
+ VY+ T L++MY LV A QVFD+M + VTWN ++GL + G AL +F
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 227 MRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
MR V++D V+L + PA++ L +
Sbjct: 192 MRSCC---------------------------VDID-----HVSLYNLIPAVSKLEKSDV 219
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
C+ +HG K+GF ++ LID+Y C + +A F+E+ WRK+ SW ++++
Sbjct: 220 CRCLHGLVIKKGFI---FAFSSGLIDMYCNCADLYAAESVFEEV--WRKDESSWGTMMAA 274
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP 406
+A NG E +E F+ M +R N VA S L A ++ G + +G+ + V ++
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ-GLIG 333
Query: 407 DIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
D+ ++ M + G LE AE++ + + E + V W ++ +
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINI--EDRDVVSWSAMIAS 375
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 35/230 (15%)
Query: 154 GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVK 213
GI +H + G V V T L+ MYS K
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYS-------------------------------K 347
Query: 214 WGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLT 273
GE+E+A +F + DR VVSW+ +I +Y + Q +A++LFR M+ + I+P VTL +
Sbjct: 348 CGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH-IKPNAVTLTS 406
Query: 274 IFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW 333
+ A + +L +S+H YA K ++ A+I +YAKCG A + F+ +P
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIES-ELETATAVISMYAKCGRFSPALKAFERLP-- 463
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
K+ V++N+L G+ G A +A + ++NM+ G+ P+ + +L C+
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 37/321 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ T + Q CA +R G +H K + + T ++ MY+
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYA------------ 447
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G AL F+R+ + V++ + YT++ KA
Sbjct: 448 -------------------KCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+++ M ++ G+ P T++ + A V+G K GF+ + + +ALI++
Sbjct: 489 VYKNM-KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS-ECHVAHALINM 546
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
+ KC + +A F + + K+ VSWN +++G+ ++G A EAV F M+ +PN V
Sbjct: 547 FTKCDALAAAIVLFDKCG-FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F++++ A + + G+ + ++ C +VDM + G +E +EK ++
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQ-CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIE 664
Query: 434 VPHEVANDVIWRTLLGACSVH 454
+ ++ V W T+L A + H
Sbjct: 665 ISNKYI--VSWNTMLSAYAAH 683
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
LLQ++ G L+V + PH N IN + +L+ +FD +RD VV W
Sbjct: 21 LLQVH--GSLIVSGLK-----PH------NQLINAYSLFQRQDLSRVIFDSVRDPGVVLW 67
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
+I YTR +AL F M E GI+P + + A A K +H
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIA 127
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
+ G D+ I AL+++Y K + SA + F ++ K++V+WN+++SG A NG +
Sbjct: 128 EMGLES-DVYIGTALVEMYCKARDLVSARQVFDKMH--VKDVVTWNTMVSGLAQNGCSSA 184
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSA-----------CSHGGLVEEGLKF 394
A+ F +M + +HV+ +++ A C HG ++++G F
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 236/503 (46%), Gaps = 70/503 (13%)
Query: 72 QVHSHITTSGLFHHP--------FHNTSTSL---------------LLFNNIIRCYSLSP 108
Q+H ++T G + F+ TS SL + +N+++ Y S
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 109 FPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQ- 167
+ I + H S F + F+F ACA + + G +H+ + K+G +
Sbjct: 136 RFQEGICLFLEL--HRSDVFP----NEFSFTAALAACARLHLSPLGACIHSKLVKLGLEK 189
Query: 168 FHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM 227
+V V L+ MY G + +A VF M + TV+WN + + G++EL L F +M
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 228 RDRSVV-------------------------------SWTLVIDAYTRMNQPMKALALFR 256
+ V SW ++ Y + +A F
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
KM G+ E +L + A+A L + +H A K G + + + +ALID+Y+K
Sbjct: 310 KM-HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDS-RVVVASALIDMYSK 367
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG-LRPNHVAF 375
CG ++ A F +P RKNL+ WN +ISG+A NG + EA++ F +++ L+P+ F
Sbjct: 368 CGMLKHAELMFWTMP--RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTF 425
Query: 376 LSVLSACSHGGL-VEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
L++L+ CSH + +E L +F M+N+ +I P + H ++ +G+ G + +A++V +
Sbjct: 426 LNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEF 485
Query: 435 PHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGD--YVLMSNIFVGVGRYK 492
+ V WR LLGACS +++ + V K++E+ + Y++MSN++ R++
Sbjct: 486 GFGY-DGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWR 544
Query: 493 DAERLREVIDERIAIKIPGYSLL 515
+ ++R+++ E +K G S +
Sbjct: 545 EVGQIRKIMRESGVLKEVGSSWI 567
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 124/240 (51%), Gaps = 33/240 (13%)
Query: 234 SWTLVIDAYTRMNQPMKALALFRKMVEV--DGIEPTEVTLLTIFPAIANLGYIKLCQSVH 291
SW+ ++ A R ++ + R VE+ DG +P L+ + N GY+ LC+ +H
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 292 GYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
GY K GF V + R++N+L+ Y +E A + F E+PD +++SWNSL+SG+ +G
Sbjct: 79 GYVTKHGF-VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPD--PDVISWNSLVSGYVQSG 135
Query: 352 MAREAVENFENMEKAGLRPNHVAF-----------LSVLSACSHGGLVEEGLKFFNKMVN 400
+E + F + ++ + PN +F LS L AC H LV+ GL+ N +V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 401 DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIG 460
+ C++DM G+ G +++A V + E + V W ++ +CS + +E+G
Sbjct: 196 N-----------CLIDMYGKCGFMDDAVLVFQHM--EEKDTVSWNAIVASCSRNGKLELG 242
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 189/372 (50%), Gaps = 39/372 (10%)
Query: 145 CAYSNCTRFGIQLHALVFKVGFQFH-VYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
C+ ++ + G Q+H V K+GF ++VQ+ L+ MY + +A ++ +P +
Sbjct: 325 CSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLEC 384
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
N + L+ G + + +F M D E G
Sbjct: 385 CNSLMTSLMHCGITKDIIEMFGLMID------------------------------EGTG 414
Query: 264 IEPTEVTLLTIFPAIA-NL-GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
I+ EVTL T+ A++ +L + C VH A K G+ D+ ++ +LID Y K G E
Sbjct: 415 ID--EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGY-AADVAVSCSLIDAYTKSGQNE 471
Query: 322 SASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
+ + F E+ N+ S+I+G+A NGM + V+ M++ L P+ V LSVLS
Sbjct: 472 VSRKVFDELDT--PNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSG 529
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
CSH GLVEEG F+ + + I P + Y C+VD+LGRAG +E+AE++ LQ + A+
Sbjct: 530 CSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD-ADC 588
Query: 442 VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVI 501
V W +LL +C +H N IG+R E ++ +E + Y+ +S + +G ++ + ++RE+
Sbjct: 589 VAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIA 648
Query: 502 DERIAIKIPGYS 513
R ++ GYS
Sbjct: 649 ASRELMREIGYS 660
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 50/355 (14%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
TF + C+ R GIQ+H V +GF +++V++ L+ +Y+ L+ A ++FDEM
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
R+ N+ + + GE + V+ RM
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRM----------------------------- 204
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
E++G+ +T + ++ + + +H K G+N+ +I + N L+D Y+
Sbjct: 205 ---ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
CG + + R F +P+ K+++SWNS++S A G ++++ F M+ G RP+ F+
Sbjct: 262 CGDLSGSMRSFNAVPE--KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFM 319
Query: 377 SVLSACSHGGLVEEGLK---FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
S L+ CS ++ G + + KM D V + ++DM G+ +E + +
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFD---VSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 434 VPH---EVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
+P E N ++ T L C + ++ + L I++G G D V +S +
Sbjct: 377 LPCLNLECCNSLM--TSLMHCGITKDI-----IEMFGLMIDEGTGIDEVTLSTVL 424
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 8/272 (2%)
Query: 187 VEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMN 246
++ + +E P T N I+ L+K G + A FD M R VV++ L+I +R
Sbjct: 32 MDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYG 91
Query: 247 QPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRI 306
++A+ L+ +MV G+ + T ++ ++ + + VH GF ++ +
Sbjct: 92 CSLRAIELYAEMVSC-GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGC-NMFV 149
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
+AL+ LYA ++ A + F E+ D +NL N L+ F G ++ E + ME
Sbjct: 150 RSALVGLYACLRLVDVALKLFDEMLD--RNLAVCNLLLRCFCQTGESKRLFEVYLRMELE 207
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
G+ N + + ++ CSH LV EG + + +V + +I +VD G L
Sbjct: 208 GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG 267
Query: 427 AEKVALQVPHEVANDVI-WRTLLGACSVHNNV 457
+ + VP + DVI W +++ C+ + +V
Sbjct: 268 SMRSFNAVPEK---DVISWNSIVSVCADYGSV 296
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 35/249 (14%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQF-HVYVQTGLLQMYSIGGLLVEAAQVFD 194
T+ ++ + C++ G QLH+LV K G+ +++V L+ YS G L + + F+
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN 273
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALAL 254
+P ++ V+SW ++ + +L L
Sbjct: 274 AVP-------------------------------EKDVISWNSIVSVCADYGSVLDSLDL 302
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
F KM + G P+ ++ + I+ + +H Y K GF+V + + +ALID+Y
Sbjct: 303 FSKM-QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 315 AKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVA 374
KC IE+++ +Q +P NL NSL++ G+ ++ +E F M G + V
Sbjct: 362 GKCNGIENSALLYQSLPCL--NLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVT 419
Query: 375 FLSVLSACS 383
+VL A S
Sbjct: 420 LSTVLKALS 428
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 190/393 (48%), Gaps = 56/393 (14%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+ FT + + + CA + G Q+HA+V G V + T ++ YS GL+ EA +V
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKV 241
Query: 193 FDEMP-HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
++ + H V N I+G ++ + A + R R
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR----------------------- 278
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
P L + ++ + + + +H A + GF V D ++ N L+
Sbjct: 279 --------------PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF-VSDSKLCNGLM 323
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM--EKAGLR 369
D+Y KCG I A F+ IP K++VSW S+I +A+NG +A+E F M E +G+
Sbjct: 324 DMYGKCGQIVQARTIFRAIPS--KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVL 381
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
PN V FL V+SAC+H GLV+EG + F M ++VP HY C +D+L +AG EE +
Sbjct: 382 PNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWR 441
Query: 430 VALQVPHEVAND------VIWRTLLGACSVHNNVEIGQRVTEKILEIEKG--HGGDYVLM 481
+ V + ND IW +L ACS++ ++ G+ V +++E E G + YVL+
Sbjct: 442 L---VERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME-ETGPENASIYVLV 497
Query: 482 SNIFVGVGRYKDAERLREVIDERIAIKIPGYSL 514
SN + +G++ E LR + + +K G+SL
Sbjct: 498 SNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 151/344 (43%), Gaps = 47/344 (13%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
L + TF + AC+ + G Q+HAL+ K G + +T L+ MYS G LV++ +V
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F+ + ++ +VSW ++ + R + +AL
Sbjct: 142 -------------------------------FESVEEKDLVSWNALLSGFLRNGKGKEAL 170
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+F M + +E +E TL ++ A+L ++ + VH G ++ + + A+I
Sbjct: 171 GVFAAMYR-ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL--VVLGTAMIS 227
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
Y+ G I A + + + + + V NSLISG N R E F M + RPN
Sbjct: 228 FYSSVGLINEAMKVYNSL-NVHTDEVMLNSLISGCIRN---RNYKEAFLLMSRQ--RPNV 281
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
S L+ CS + G + + + V D + ++DM G+ G++ +A +
Sbjct: 282 RVLSSSLAGCSDNSDLWIGKQIHCVALRN-GFVSDSKLCNGLMDMYGKCGQIVQARTIFR 340
Query: 433 QVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEI-EKGHG 475
+P + V W +++ A +V+ + G + E E+ E+G G
Sbjct: 341 AIPSKSV--VSWTSMIDAYAVNGD---GVKALEIFREMCEEGSG 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP--TEVTLLTIFPAIAN 280
+FD + R + S + ++ R P LALF +++ P + T + A +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF---LQIHRASPDLSSHTFTPVLGACSL 96
Query: 281 LGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSW 340
L Y + + VH K+G I T ALID+Y+K G + + R F+ + + K+LVSW
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKT-ALIDMYSKYGHLVDSVRVFESVEE--KDLVSW 153
Query: 341 NSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
N+L+SGF NG +EA+ F M + + + SV+ C+ ++++G
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQG 204
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 192/451 (42%), Gaps = 111/451 (24%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ +TF + ACA + R G+Q+H + K GF+ ++YVQ+ L+ MY+ + A +
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL 285
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRM--RDRSVVSWTL-------------- 237
+ M V+WN I G V+ G + ALS+F RM RD + +T+
Sbjct: 286 EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEM 345
Query: 238 ------------------------VIDAYTRMNQPMKALALFRKMVEVD----------- 262
++D Y + AL +F M+E D
Sbjct: 346 KIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGN 405
Query: 263 -------------------GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID 303
GI P ++ ++ A A L ++ Q VHG K GF
Sbjct: 406 THNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS-S 464
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
+ + N+L+ +Y KCG +E A+ F + ++L++W LI G+A NG+ +A F++M
Sbjct: 465 LSVNNSLVTMYTKCGSLEDANVIFNSME--IRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 364 EKA-GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
G+ P P+ HY C++D+ GR+G
Sbjct: 523 RTVYGITPG----------------------------------PE--HYACMIDLFGRSG 546
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMS 482
+ E++ Q+ E + +W+ +L A H N+E G+R + ++E+E + YV +S
Sbjct: 547 DFVKVEQLLHQMEVE-PDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLS 605
Query: 483 NIFVGVGRYKDAERLREVIDERIAIKIPGYS 513
N++ GR +A +R ++ R K PG S
Sbjct: 606 NMYSAAGRQDEAANVRRLMKSRNISKEPGCS 636
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSW 235
LL S G + EA Q+FD+MP R TWN I + A +F ++ +SW
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISW 93
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
+I Y + ++A LF +M + DGI+P E TL ++ +L + + +HG+
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMARE 355
K GF+ +D+ + N L+ +YA+C I A F E + KN V+W S+++G++ NG A +
Sbjct: 153 KTGFD-LDVNVVNGLLAMYAQCKRISEAEYLF-ETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVV 415
A+E F ++ + G + N F SVL+AC+ G++ +V +I ++
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALI 269
Query: 416 DMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGAC 451
DM + +E A AL EV + V W +++ C
Sbjct: 270 DMYAKCREMESAR--ALLEGMEVDDVVSWNSMIVGC 303
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 186/376 (49%), Gaps = 38/376 (10%)
Query: 143 QACAYSNCTRFGIQLHALVFK-VGFQFHV-YVQTGLLQMYSIGGLLVEAAQVFDEMPHRS 200
+AC++ ++G H LV + F + V+ L+ MYS L A VF ++ S
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
TWN I+G AY N+ + + K +
Sbjct: 388 LSTWNSIISGF-----------------------------AY---NERSEETSFLLKEML 415
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
+ G P +TL +I P A +G ++ + H Y +R + + N+L+D+YAK G I
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+A R F + +++ V++ SLI G+ G A+ F++M+++G++P+HV ++VLS
Sbjct: 476 IAAKRVFDSMR--KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
ACSH LV EG F KM + I + HY C+VD+ RAG L++A + +P+E +
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE-PS 592
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEK-ILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE 499
+ TLL AC +H N IG+ +K +LE + H G Y+L+++++ G + ++
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKT 652
Query: 500 VIDERIAIKIPGYSLL 515
++ + K ++L+
Sbjct: 653 LLSDLGVQKAHEFALM 668
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 18/307 (5%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT+ + +ACA +G +H + + ++YV L+ MY G + A ++F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPM 249
D M R V+WN IN ++ A + DRM + S+V+W + +
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI-RITN 308
AL M + + V ++ A +++G +K + H + DI + N
Sbjct: 303 GALNCVVGMRNCN-VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
+LI +Y++C + A FQ++ +L +WNS+ISGFA N + E + M +G
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVE--ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFF-----NKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
PNH+ S+L + G ++ G +F + DC I+ + +VDM ++G
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL-----WNSLVDMYAKSGE 474
Query: 424 LEEAEKV 430
+ A++V
Sbjct: 475 IIAAKRV 481
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 149/403 (36%), Gaps = 88/403 (21%)
Query: 89 NTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYS 148
+ S +LFN+ C S H ++ + T + Y S + F S A S
Sbjct: 42 DESVPQVLFNSFRHCIS-----HGQLYEAFRTF----SLLRYQS-GSHEFVLYSSASLLS 91
Query: 149 NCTRF-----GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
C F G QLHA G +F + L+ YS LL EA + + +
Sbjct: 92 TCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
WNV I +Y R + ++++++++M+ G
Sbjct: 152 WNVLIG-------------------------------SYIRNKRFQESVSVYKRMMS-KG 179
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
I E T ++ A A L + VHG E ++ + NALI +Y + G ++ A
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC-NLYVCNALISMYKRFGKVDVA 238
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG---------------- 367
R F + + ++ VSWN++I+ + EA + + M +G
Sbjct: 239 RRLFDRMSE--RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Query: 368 -------------------LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+R VA ++ L ACSH G ++ G F ++ C DI
Sbjct: 297 EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI 356
Query: 409 RHY-GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
+ ++ M R L A V QV E + W +++
Sbjct: 357 DNVRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISG 397
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 186/376 (49%), Gaps = 38/376 (10%)
Query: 143 QACAYSNCTRFGIQLHALVFK-VGFQFHV-YVQTGLLQMYSIGGLLVEAAQVFDEMPHRS 200
+AC++ ++G H LV + F + V+ L+ MYS L A VF ++ S
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
TWN I+G AY N+ + + K +
Sbjct: 388 LSTWNSIISGF-----------------------------AY---NERSEETSFLLKEML 415
Query: 261 VDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCI 320
+ G P +TL +I P A +G ++ + H Y +R + + N+L+D+YAK G I
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 321 ESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+A R F + +++ V++ SLI G+ G A+ F++M+++G++P+HV ++VLS
Sbjct: 476 IAAKRVFDSMR--KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAN 440
ACSH LV EG F KM + I + HY C+VD+ RAG L++A + +P+E +
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE-PS 592
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEK-ILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE 499
+ TLL AC +H N IG+ +K +LE + H G Y+L+++++ G + ++
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKT 652
Query: 500 VIDERIAIKIPGYSLL 515
++ + K ++L+
Sbjct: 653 LLSDLGVQKAHEFALM 668
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 18/307 (5%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT+ + +ACA +G +H + + ++YV L+ MY G + A ++F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPM 249
D M R V+WN IN ++ A + DRM + S+V+W + +
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDI-RITN 308
AL M + + V ++ A +++G +K + H + DI + N
Sbjct: 303 GALNCVVGMRNCN-VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 309 ALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
+LI +Y++C + A FQ++ +L +WNS+ISGFA N + E + M +G
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVE--ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFF-----NKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
PNH+ S+L + G ++ G +F + DC I+ + +VDM ++G
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL-----WNSLVDMYAKSGE 474
Query: 424 LEEAEKV 430
+ A++V
Sbjct: 475 IIAAKRV 481
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 149/403 (36%), Gaps = 88/403 (21%)
Query: 89 NTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYS 148
+ S +LFN+ C S H ++ + T + Y S + F S A S
Sbjct: 42 DESVPQVLFNSFRHCIS-----HGQLYEAFRTF----SLLRYQS-GSHEFVLYSSASLLS 91
Query: 149 NCTRF-----GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT 203
C F G QLHA G +F + L+ YS LL EA + + +
Sbjct: 92 TCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDG 263
WNV I +Y R + ++++++++M+ G
Sbjct: 152 WNVLIG-------------------------------SYIRNKRFQESVSVYKRMMS-KG 179
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
I E T ++ A A L + VHG E ++ + NALI +Y + G ++ A
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC-NLYVCNALISMYKRFGKVDVA 238
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG---------------- 367
R F + + ++ VSWN++I+ + EA + + M +G
Sbjct: 239 RRLFDRMSE--RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Query: 368 -------------------LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+R VA ++ L ACSH G ++ G F ++ C DI
Sbjct: 297 EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI 356
Query: 409 RHY-GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
+ ++ M R L A V QV E + W +++
Sbjct: 357 DNVRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISG 397
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 36/337 (10%)
Query: 132 SLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQ 191
++D T ++ C+ + + G Q H +++ G+ +V V LL MY G L A
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
F +M +RD VSW ++ R+ + +A
Sbjct: 452 WFRQMSE----------------------------LRDE--VSWNALLTGVARVGRSEQA 481
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
L+ F M +V+ +P++ TL T+ AN+ + L +++HG+ + G+ ID+ I A++
Sbjct: 482 LSFFEGM-QVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK-IDVVIRGAMV 538
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
D+Y+KC C + A F+E ++L+ WNS+I G NG ++E E F +E G++P+
Sbjct: 539 DMYSKCRCFDYAIEVFKEAAT--RDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
HV FL +L AC G VE G ++F+ M I P + HY C++++ + G L + E+
Sbjct: 597 HVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL 656
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKIL 468
L +P + ++ R + AC + ++G ++++
Sbjct: 657 LLMPFDPPMQMLTR-INDACQRYRWSKLGAWAAKRLM 692
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 175/378 (46%), Gaps = 59/378 (15%)
Query: 97 FNNIIRCYSLSPFPHQAI-------HFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSN 149
+N I+R Y F +A+ ++ LNH T + + AC+ S
Sbjct: 231 WNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH-------------TVSSVMLACSRSL 277
Query: 150 CTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFIN 209
G +HA+ K+ V T + MY L A +VFD+ + +W ++
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 210 GLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT---RMNQPMKALALFRKMVEVDGIEP 266
G G A +FD M +R++VSW ++ Y ++ + L L R+ E++ I+
Sbjct: 338 GYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ--EIENID- 394
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
VTL+ I + + +++ + HG+ + G++ ++ + NAL+D+Y KCG ++SA+ +
Sbjct: 395 -NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDT-NVIVANALLDMYGKCGTLQSANIW 452
Query: 327 FQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS--- 383
F+++ + R VSWN+L++G A G + +A+ FE M+ +P+ ++L+ C+
Sbjct: 453 FRQMSELRDE-VSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIP 510
Query: 384 --------HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVP 435
HG L+ +G K D+ G +VDM + + A++V
Sbjct: 511 ALNLGKAIHGFLIRDGYKI------------DVVIRGAMVDMYSKCRCFD----YAIEVF 554
Query: 436 HEVAND--VIWRTLLGAC 451
E A ++W +++ C
Sbjct: 555 KEAATRDLILWNSIIRGC 572
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 74/346 (21%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
+FA + ++C R QLH V K G+ +V ++T ++ +Y ++ +A +VFDE+
Sbjct: 164 SFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI 223
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFR 256
+ S V+WNV ++ Y M +A+ +F
Sbjct: 224 VNPSDVSWNV-------------------------------IVRRYLEMGFNDEAVVMFF 252
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAK 316
KM+E++ + P T+ ++ A + +++ + +H A K V D ++ ++ D+Y K
Sbjct: 253 KMLELN-VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV-VADTVVSTSVFDMYVK 310
Query: 317 CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFL 376
C +ESA R F + K+L SW S +SG+AM+G+ REA E F+ M + N V++
Sbjct: 311 CDRLESARRVFDQTRS--KDLKSWTSAMSGYAMSGLTREARELFDLMPER----NIVSWN 364
Query: 377 SVLSACSHGGLVEEGLKFFNKM---------------VNDCQIVPDI-----------RH 410
++L H +E L F M +N C + D+ RH
Sbjct: 365 AMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRH 424
Query: 411 --------YGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
++DM G+ G L+ A + + E+ ++V W LL
Sbjct: 425 GYDTNVIVANALLDMYGKCGTLQSA-NIWFRQMSELRDEVSWNALL 469
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N I K G V+ A +F+ M +R SW VI A + + +FR+M DG+
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM-NRDGV 158
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
TE + + + + ++L + +H K G++ ++ + +++D+Y KC + A
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSG-NVDLETSIVDVYGKCRVMSDAR 217
Query: 325 RFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSH 384
R F EI + + VSWN ++ + G EAV F M + +RP + SV+ ACS
Sbjct: 218 RVFDEIVN--PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 385 GGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+E G K + + +V D V DM + RLE A +V
Sbjct: 276 SLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 304 IRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
I + N I+ Y KCGC++ A F+E+P+ ++ SWN++I+ A NG++ E F M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPE--RDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP-----DIRHYGCVVDML 418
+ G+R +F VL +C GL+ + L+ ++ C +V ++ +VD+
Sbjct: 154 NRDGVRATETSFAGVLKSC---GLILD-LRLLRQL--HCAVVKYGYSGNVDLETSIVDVY 207
Query: 419 GRAGRLEEAEKVALQV--PHEVANDVIWRTLL 448
G+ + +A +V ++ P +V+ +VI R L
Sbjct: 208 GKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 172/383 (44%), Gaps = 35/383 (9%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
L F+ AC + + Q+H K G F+ +QT LL M + + +A ++
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FD+ P S D S + T +I Y R P KA+
Sbjct: 475 FDQWP------------------------SNLD-----SSKATTSIIGGYARNGLPDKAV 505
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+LF + + + EV+L I LG+ ++ +H YA K G+ DI + N+LI
Sbjct: 506 SLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY-FSDISLGNSLIS 564
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+YAKC + A + F + + +++SWNSLIS + + EA+ + M + ++P+
Sbjct: 565 MYAKCCDSDDAIKIFNTMRE--HDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDI 622
Query: 373 VAFLSVLSA--CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ V+SA + + F M I P HY V +LG G LEEAE
Sbjct: 623 ITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDT 682
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGR 490
+P + V+ R LL +C +H+N + +RV + IL + +Y+L SNI+ G
Sbjct: 683 INSMPVQPEVSVL-RALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGF 741
Query: 491 YKDAERLREVIDERIAIKIPGYS 513
+ +E +RE + ER K P S
Sbjct: 742 WHRSEMIREEMRERGYRKHPAKS 764
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 172/382 (45%), Gaps = 19/382 (4%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
+D+FT + L +C S+ G +LH ++G + V L+ YS + + +
Sbjct: 283 VDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESL 342
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
++ M + VT+ I + +G V+ A+ +F + +++ +++ ++ + R +KAL
Sbjct: 343 YEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKAL 402
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
LF M++ G+E T+ +L + A + K+ + +HG+ K G + I AL+D
Sbjct: 403 KLFTDMLQ-RGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFG-TAFNPCIQTALLD 460
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENF-ENMEKAGLRPN 371
+ +C + A F + P + + S+I G+A NG+ +AV F + + L +
Sbjct: 461 MCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLD 520
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV- 430
V+ +L+ C G E G + + DI ++ M + ++A K+
Sbjct: 521 EVSLTLILAVCGTLGFREMGYQIHCYALK-AGYFSDISLGNSLISMYAKCCDSDDAIKIF 579
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNN----VEIGQRVTEKILEIEKGHGGDYVLMSNIFV 486
H+V + W +L+ + N + + R+ EK ++ + ++ + +
Sbjct: 580 NTMREHDV---ISWNSLISCYILQRNGDEALALWSRMNEKEIKPD-------IITLTLVI 629
Query: 487 GVGRYKDAERLREVIDERIAIK 508
RY ++ +L D +++K
Sbjct: 630 SAFRYTESNKLSSCRDLFLSMK 651
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 147/354 (41%), Gaps = 76/354 (21%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMY--SIGGLLVEAAQ 191
+ +TF + AC + GIQ+H L+ K GF V+V L+ +Y G + +
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 192 VFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKA 251
+FDE+P R +WN ++ LVK G + KA
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEG-------------------------------KSHKA 268
Query: 252 LALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
LF +M V+G TL T+ + + + + +HG A + G + ++ + NALI
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGL-MQELSVNNALI 327
Query: 312 DLYAK-------------------------------CGCIESASRFFQEIPDWRKNLVSW 340
Y+K G ++SA F + + KN +++
Sbjct: 328 GFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE--KNTITY 385
Query: 341 NSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN 400
N+L++GF NG +A++ F +M + G+ + S + AC GLV E K ++ ++
Sbjct: 386 NALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE--KKVSEQIH 440
Query: 401 DCQIVPDIRHYGCV----VDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
I C+ +DM R R+ +AE++ Q P + + +++G
Sbjct: 441 GFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGG 494
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
F ++ T N I+ +K G A+ VF + +VVS+T +I ++R+N ++AL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
+F +M + ++P E T + I A + L +HG K GF + + ++N+L+
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF-LNSVFVSNSLMS 224
Query: 313 LYAK--CGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA-GLR 369
LY K + + F EIP ++++ SWN+++S G + +A + F M + G
Sbjct: 225 LYDKDSGSSCDDVLKLFDEIP--QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFG 282
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
+ ++LS+C+ ++ G + + +
Sbjct: 283 VDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 148/283 (52%), Gaps = 10/283 (3%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T+ + AC++ L L+ + + + +V+T LL M++ + A ++F+E+
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 197 -PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALF 255
R+ VTWN I+G + G++ A +FD M R+VVSW +I Y Q A+ F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
M++ +P EVT++++ A ++ ++L + Y K + D +LI +YA
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY-RSLIFMYA 444
Query: 316 KCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
+ G + A R F E+ + +++VS+N+L + FA NG E + M+ G+ P+ V +
Sbjct: 445 RGGNLWEAKRVFDEMKE--RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
SVL+AC+ GL++EG + F + N P HY C +D+L
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 163/359 (45%), Gaps = 70/359 (19%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D F+F + ++ RFGI ALV K+GF YV+ ++ MY + A +VF
Sbjct: 105 DAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVF 159
Query: 194 DEMPHRSTVTWNVFINGLVKWG-------------------------------EVELALS 222
D++ R WNV I+G KWG ++E A
Sbjct: 160 DQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARK 219
Query: 223 VFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
FDRM ++SVVSW ++ Y + AL LF M+ + G+ P E T + + A +
Sbjct: 220 YFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL-GVRPNETTWVIVISACSFRA 278
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR-------- 334
L +S+ +++ ++ + AL+D++AKC I+SA R F E+ R
Sbjct: 279 DPSLTRSLVKLIDEKRVR-LNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAM 337
Query: 335 ----------------------KNLVSWNSLISGFAMNGMAREAVENFENMEKAG-LRPN 371
+N+VSWNSLI+G+A NG A A+E FE+M G +P+
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPD 397
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
V +SVLSAC H +E G + + QI + Y ++ M R G L EA++V
Sbjct: 398 EVTMISVLSACGHMADLELGDCIVD-YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRV 455
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T A + CA + G ++H K F +V + T L+ MYS
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYS------------ 464
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K G E + +FDR+ R+V +WT +ID Y +
Sbjct: 465 -------------------KCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIE 505
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
+FR M+ + P VT+ + ++L +KL + +HG+ K+ F I ++ +I +
Sbjct: 506 VFRLML-LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPF-VSARIIKM 563
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
Y KCG + SA+ F + K ++W ++I + N + R+A+ FE M G PN
Sbjct: 564 YGKCGDLRSANFSFDAVA--VKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVAL 432
F +VLS CS G V+E +FFN M+ + P HY V+++L R GR+EEA+++A+
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAV 680
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 125/259 (48%), Gaps = 33/259 (12%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
L+ ++ + + ++ A ++ R G++ HAL K G V+++T L+ MY
Sbjct: 212 LNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMY------------ 259
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
K G+V LA VFD + +R +V W +I + +AL
Sbjct: 260 -------------------FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEAL 300
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
LFR M+ + I P V L TI P + ++ +KL + VH + K V + + LID
Sbjct: 301 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLID 360
Query: 313 LYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
LY KCG + S R F ++N +SW +L+SG+A NG +A+ + M++ G RP+
Sbjct: 361 LYCKCGDMASGRRVF--YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDV 418
Query: 373 VAFLSVLSACSHGGLVEEG 391
V +VL C+ +++G
Sbjct: 419 VTIATVLPVCAELRAIKQG 437
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 150/355 (42%), Gaps = 40/355 (11%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
++ TF+ L +AC G Q+H + G + + +++T L+ MY+ G + +A +V
Sbjct: 109 VNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKV 168
Query: 193 FDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKAL 252
FDE + +WN + G V G+ R +D L
Sbjct: 169 FDESTSSNVYSWNALLRGTVISGK--------KRYQD---------------------VL 199
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRG-FNVIDIRITNALI 311
+ F +M E+ G++ +L +F + A ++ H A K G FN + ++ +L+
Sbjct: 200 STFTEMREL-GVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK--TSLV 256
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLRP 370
D+Y KCG + A R F EI + +++V W ++I+G A N EA+ F M + + P
Sbjct: 257 DMYFKCGKVGLARRVFDEIVE--RDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP 314
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N V ++L ++ G + ++ V + ++D+ + G + +V
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
N + W L+ + N Q + + ++G D V ++ +
Sbjct: 375 FYGSKQR--NAISWTALMSGYAA--NGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 207 FINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYT---RMNQPMKALALFRKMVEVDG 263
I+ K G++ VF + R+ +SWT ++ Y R +Q ++++ ++ +G
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ----EG 413
Query: 264 IEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESA 323
P VT+ T+ P A L IK + +H YA K F + ++ + +L+ +Y+KCG E
Sbjct: 414 FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF-LPNVSLVTSLMVMYSKCGVPEYP 472
Query: 324 SRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
R F + ++N+ +W ++I + N R +E F M + RP+ V VL+ CS
Sbjct: 473 IRLFDRLE--QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Query: 384 HGGLVEEGLKFFNKMV-NDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
++ G + ++ + + +P + ++ M G+ G L A
Sbjct: 531 DLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 191/439 (43%), Gaps = 79/439 (17%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGF-QFHVYVQTGLLQMYSIGGLLVEAAQVFD 194
FTF+ L+ + C R G Q+H G ++++ V ++ MY G+ A VF
Sbjct: 137 FTFSILA---SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFL 193
Query: 195 EMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV---------------------- 232
M R V+WN I G E+AL F MR+ +
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSK 253
Query: 233 -------------VSWTLV----IDAYTRMNQPMKALALFRKMVEVDGI----------- 264
+S ++V ID +++ N+ ++ LFR++ + D +
Sbjct: 254 GKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSW 313
Query: 265 -------------------EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
P + T ++ ++ N + VH K GF+ +D
Sbjct: 314 HCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDHGADVHSLVIKLGFD-LDTA 371
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM-E 364
+ +L+++Y K G ++ A F + K+L+ WN++I G A N A E++ F +
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDG--KDLIFWNTVIMGLARNSRAVESLAIFNQLLM 429
Query: 365 KAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRL 424
L+P+ V + +L AC + G V EG++ F+ M + P HY C++++L R G +
Sbjct: 430 NQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMI 489
Query: 425 EEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNI 484
EA+ +A ++P E ++ IW +L A + + + V + +LE E Y+++ I
Sbjct: 490 NEAKDIADKIPFEPSSH-IWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKI 548
Query: 485 FVGVGRYKDAERLREVIDE 503
+ R++++ +LR ++E
Sbjct: 549 YEMTWRWENSVKLRYAMNE 567
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 11/299 (3%)
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGE 216
+HA + + GF Y LQ+Y G ++ A Q+FD++P ++T+TWNV + GL K G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 217 VELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+ AL +FD M +R VVSW +I + +F M + I PTE T F
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE-IRPTEFT----FS 140
Query: 277 AIANL-GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK 335
+A+L ++ + +HG A G + ++ + N+++D+Y + G + A F + D +
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED--R 198
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
++VSWN LI + +G A++ F M + ++P+ V+S CS + +G +
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVH 454
+ + I G +DM + RL+++ K+ ++ E + V+ +++G+ S H
Sbjct: 259 ALCIKMGFLSNSIV-LGAGIDMFSKCNRLDDSVKLFREL--EKWDSVLCNSMIGSYSWH 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 93/241 (38%), Gaps = 46/241 (19%)
Query: 95 LLFNNIIRCYSLSPFPHQAIHFSIHTLNHS--STFFTYSS-LDTFTFAFLSQACAYSNCT 151
+L N++I YS A+ I + S FT+SS L + L
Sbjct: 302 VLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH-------- 353
Query: 152 RFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGL 211
G +H+LV K+GF V T L++MY G + A VF + + + WN I GL
Sbjct: 354 --GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGL 411
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
R ++ +++LA+F +++ ++P VTL
Sbjct: 412 -------------------------------ARNSRAVESLAIFNQLLMNQSLKPDRVTL 440
Query: 272 LTIFPAIANLGYIKLCQSVHGYAEK-RGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
+ I A G++ + EK G N + +I+L + G I A +I
Sbjct: 441 MGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYA-CIIELLCRVGMINEAKDIADKI 499
Query: 331 P 331
P
Sbjct: 500 P 500
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 6/220 (2%)
Query: 254 LFRKMVEV--DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALI 311
L++ +E+ G P + +F + ANL ++ + VH + + F D ++ N +I
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG-DPKLNNMVI 278
Query: 312 DLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
++ +C I A R F + D K++ SW+ ++ ++ NGM +A+ FE M K GL+PN
Sbjct: 279 SMFGECSSITDAKRVFDHMVD--KDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
FL+V AC+ G +EE F+ M N+ I P HY V+ +LG+ G L EAE+
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIE 471
+P E D W + +H ++++ + E +++++
Sbjct: 397 RDLPFEPTAD-FWEAMRNYARLHGDIDLEDYMEELMVDVD 435
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 205 NVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
N+ I+ + + A VFD M D+ + SW L++ AY+ AL LF +M + G+
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK-HGL 333
Query: 265 EPTEVTLLTIFPAIANLGYIKLC-------QSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
+P E T LT+F A A +G I+ ++ HG + K + ++ + KC
Sbjct: 334 KPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL-------GVLGVLGKC 386
Query: 318 GCIESASRFFQEIP 331
G + A ++ +++P
Sbjct: 387 GHLVEAEQYIRDLP 400
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 35/249 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+ T + +AC G +LHA + K + +VY+ + L+ +Y
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY------------- 430
Query: 194 DEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALA 253
K GE A +V ++ R VVSWT +I + + +AL
Sbjct: 431 ------------------CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
++M++ +G+EP T + A AN + + +S+H A K+ + ++ + +ALI +
Sbjct: 473 FLKEMIQ-EGVEPNPFTYSSALKACANSESLLIGRSIHSIA-KKNHALSNVFVGSALIHM 530
Query: 314 YAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
YAKCG + A R F +P+ KNLVSW ++I G+A NG REA++ ME G +
Sbjct: 531 YAKCGFVSEAFRVFDSMPE--KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDY 588
Query: 374 AFLSVLSAC 382
F ++LS C
Sbjct: 589 IFATILSTC 597
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 155/337 (45%), Gaps = 44/337 (13%)
Query: 112 QAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVY 171
+AI I LNH + + FT + +AC+ RFG Q+H+LV K + V+
Sbjct: 267 KAIGMFIGMLNH------WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 172 VQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
V T L+ MY+ K GE+ VFD M +R+
Sbjct: 321 VGTSLMDMYA-------------------------------KCGEISDCRKVFDGMSNRN 349
Query: 232 VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVH 291
V+WT +I A+ R +A++LFR M I +T+++I A ++G + L + +H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-ANNLTVVSILRACGSVGALLLGKELH 408
Query: 292 GYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNG 351
K ++ I + L+ LY KCG A Q++P +++VSW ++ISG + G
Sbjct: 409 AQIIKNSIEK-NVYIGSTLVWLYCKCGESRDAFNVLQQLPS--RDVVSWTAMISGCSSLG 465
Query: 352 MAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHY 411
EA++ + M + G+ PN + S L AC++ + G + + + + ++
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG-RSIHSIAKKNHALSNVFVG 524
Query: 412 GCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLL 448
++ M + G + EA +V +P + N V W+ ++
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMPEK--NLVSWKAMI 559
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 139/292 (47%), Gaps = 30/292 (10%)
Query: 162 FKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELAL 221
F++G Q H G + +G L+VE++ V+ + GE+ AL
Sbjct: 200 FELGRQVH-----GNMVKVGVGNLIVESSLVY----------------FYAQCGELTSAL 238
Query: 222 SVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANL 281
FD M ++ V+SWT VI A +R +KA+ +F M+ P E T+ +I A +
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN-HWFLPNEFTVCSILKACSEE 297
Query: 282 GYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWN 341
++ + VH KR D+ + +L+D+YAKCG I + F + + +N V+W
Sbjct: 298 KALRFGRQVHSLVVKRMIKT-DVFVGTSLMDMYAKCGEISDCRKVFDGMSN--RNTVTWT 354
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND 401
S+I+ A G EA+ F M++ L N++ +S+L AC G + G + +++ +
Sbjct: 355 SIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN 414
Query: 402 CQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI-WRTLLGACS 452
I ++ +V + + G +A V Q+P + DV+ W ++ CS
Sbjct: 415 -SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP---SRDVVSWTAMISGCS 462
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 144/326 (44%), Gaps = 48/326 (14%)
Query: 131 SSLDT--FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVE 188
SS D+ +A L++ SN R ++HA+ K +Y L+ G LV
Sbjct: 76 SSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVY 135
Query: 189 AAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQP 248
A +VFD MP ++TVTW I+G +K+G + D
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYG-----------LED------------------- 165
Query: 249 MKALALFRKMVEVDGIEPT-EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT 307
+A ALF V+ GI T E + + + +L + VHG K G V ++ +
Sbjct: 166 -EAFALFEDYVK-HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG--VGNLIVE 221
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
++L+ YA+CG + SA R F + + K+++SW ++IS + G +A+ F M
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEE--KDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKF---FNKMVNDCQIVPDIRHYGCVVDMLGRAGRL 424
PN S+L ACS E+ L+F + +V I D+ ++DM + G +
Sbjct: 280 FLPNEFTVCSILKACSE----EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 425 EEAEKVALQVPHEVANDVIWRTLLGA 450
+ KV + + N V W +++ A
Sbjct: 336 SDCRKVFDGMSNR--NTVTWTSIIAA 359
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 147/324 (45%), Gaps = 28/324 (8%)
Query: 156 QLHALVFKV---GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFI 208
++ +LV K+ G Y L+ G L EAAQVF+EM VT+N +
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 209 NGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+ K + A+ V + M S+V++ +I AY R +A+ L +M E G
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE-KGT 380
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
+P T T+ G ++ S+ G +I NA I +Y G
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICTFNAFIKMYGNRGKFTEMM 439
Query: 325 RFFQEI------PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSV 378
+ F EI PD +V+WN+L++ F NGM E F+ M++AG P F ++
Sbjct: 440 KIFDEINVCGLSPD----IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 379 LSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE- 437
+SA S G E+ + + +M+ D + PD+ Y V+ L R G E++EKV ++
Sbjct: 496 ISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 438 -VANDVIWRTLLGACSVHNNVEIG 460
N++ + +LL A + N EIG
Sbjct: 555 CKPNELTYCSLLHAYA--NGKEIG 576
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 129/287 (44%), Gaps = 16/287 (5%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR- 230
++ M G + AA +F+ + ++ I+ G A++VF +M +
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 231 ---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
+++++ ++++ + +M P + + ++ DGI P T T+ +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE--IPDWRKNLVSWNSLIS 345
V + GF+ D NAL+D+Y K + A + E + + ++V++NSLIS
Sbjct: 299 AQVFEEMKAAGFSY-DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN-DCQI 404
+A +GM EA+E M + G +P+ + ++LS G VE + F +M N C+
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK- 416
Query: 405 VPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLG 449
P+I + + M G G+ E K+ + V + V W TLL
Sbjct: 417 -PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 128/297 (43%), Gaps = 19/297 (6%)
Query: 146 AYSNCTRF--GIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP----HR 199
AYS C F + ++ + G + +L + GG+ ++ +V EM
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 200 STVTWNVFINGLVKWGEVELALSVFDR-----MRDRSVVSWTLVIDAYTRMNQPMKALAL 254
+ +T+ ++ E+ L S+ + + R+V+ TLV+ ++ + +A
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPEAERA 616
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLY 314
F ++ E G P TL ++ + V Y ++RGF + N+L+ ++
Sbjct: 617 FSELKE-RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF-TPSMATYNSLMYMH 674
Query: 315 AKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
++ + +EI + +++S+N++I + N R+A F M +G+ P+
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEAE 428
+ + + + + + + EE + M+ C+ P+ Y +VD + R +EA+
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR--PNQNTYNSIVDGYCKLNRKDEAK 789
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 303 DIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
D+ NA+I++Y+ C ++ A + F+E+P+W + ++ F NG EA++ F
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLC--VMMRCFVNNGYGEEAIDLFTR 210
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
++ G +PN F V S C+ G V+EG F M + IVP + HY V ML +G
Sbjct: 211 FKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSG 270
Query: 423 RLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIE 471
L+EA ++P E + DV W TL+ VH +VE+G R E + +++
Sbjct: 271 HLDEALNFVERMPMEPSVDV-WETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 30/347 (8%)
Query: 97 FNNIIRCYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSL----DTFTFAFLSQACAYSNC 150
F+ +I Y S +AI S+ TY+++ F A +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNV 206
R G+Q + F LL + S GGL A +FDEM +R ++N
Sbjct: 331 QRNGVQPDRITF-----------NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 207 FINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
++ + K G+++LA + +M + +VVS++ VID + + + +AL LF +M +
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL- 438
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
GI V+ T+ +G + + G D+ NAL+ Y K G +
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK-DVVTYNALLGGYGKQGKYDE 497
Query: 323 ASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
+ F E+ NL+++++LI G++ G+ +EA+E F + AGLR + V + +++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
A GLV + ++M + I P++ Y ++D GR+ ++ +
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 10/257 (3%)
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMV 259
++ I+ + G E A+SVF+ M++ ++V++ VIDA + K +A F +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 260 EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC 319
+ +G++P +T ++ + G + +++ R D+ N L+D K G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ-DVFSYNTLLDAICKGGQ 389
Query: 320 IESASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
++ A ++P R N+VS++++I GFA G EA+ F M G+ + V++ +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVP 435
+LS + G EE L +M + I D+ Y ++ G+ G+ +E +KV ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMAS-VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 436 HEVANDVIWRTLLGACS 452
H + N + + TL+ S
Sbjct: 509 HVLPNLLTYSTLIDGYS 525
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 18/276 (6%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D TF L C+ L + + V+ LL GG + A ++
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 194 DEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMR------DRSVVSWTLVIDAYT 243
+MP + + V+++ I+G K G + AL++F MR DR VS+ ++ YT
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR--VSYNTLLSIYT 455
Query: 244 RMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVID 303
++ + +AL + R+M V GI+ VT + G + V + E + +V+
Sbjct: 456 KVGRSEEALDILREMASV-GIKKDVVTYNALLGGYGKQGKYDEVKKV--FTEMKREHVLP 512
Query: 304 IRIT-NALIDLYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENF 360
+T + LID Y+K G + A F+E R ++V +++LI NG+ AV
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+ M K G+ PN V + S++ A ++ + N
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 305 RITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
++ +A+I + G + A R F+ + + ++++LIS + +G+ EA+ F +
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGL-VEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRA 421
M++ GLRPN V + +V+ AC GG+ ++ KFF++M + + PD + ++ + R
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-VQPDRITFNSLLAVCSRG 352
Query: 422 GRLEEAEKVALQVPH-EVANDVI-WRTLLGA 450
G E A + ++ + + DV + TLL A
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 125/331 (37%), Gaps = 63/331 (19%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
LL +Y+ G EA + EM + VT+N + G K G+ + VF M+
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 232 VV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
V+ +++ +ID Y++ +A+ +FR+ G+ V + A+ G +
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSA 568
Query: 288 QSVHGYAEKRGFN--------VIDIRITNALIDL---YAKCGCIESASRFFQEIPDWRKN 336
S+ K G + +ID +A +D Y+ G + +S + + N
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN 628
Query: 337 LV---------SWNSLISGFAMNGMAREA--VENFENMEKAGLRPNHVAFLSVLSACSHG 385
V N+ + GM + +E F M + ++PN V F ++L+ACS
Sbjct: 629 RVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
Query: 386 G-------LVEEGLKFFNKM-------------------------VNDCQIVPDIRHYGC 413
L+EE F NK+ VN+ Y
Sbjct: 689 NSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNA 748
Query: 414 VVDMLGRAGRLEEAEKVALQVPHEVANDVIW 444
+ DML G+ AE VAL+ + +W
Sbjct: 749 LTDMLWHFGQKRGAELVALEGRSRQVWENVW 779
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENF 360
+ DI N++I++Y+ CG +E A F +P+ +NL +W +I FA NG +A++ F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPE--RNLETWCGVIRCFAKNGQGEDAIDTF 270
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGR 420
++ G +P+ F + AC G + EGL F M + I+P + HY +V ML
Sbjct: 271 SRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAE 330
Query: 421 AGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIE 471
G L+EA + + V +W TL+ VH ++ +G R + + +++
Sbjct: 331 PGYLDEALRFVESMEPNVD---LWETLMNLSRVHGDLILGDRCQDMVEQLD 378
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 285 KLCQSVHGYAEKR--------GFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
K+C G E + + +D+ + L+++Y+ CG A+ F+++ + KN
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSE--KN 319
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
L +W +I FA NG +A++ F ++ G P+ F + AC G V+EGL F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNN 456
M D I P I Y +V+M G L+EA + ++P E DV W TL+ VH N
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDV-WETLMNLSRVHGN 438
Query: 457 VEIGQRVTE 465
+E+G E
Sbjct: 439 LELGDYCAE 447
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 152/334 (45%), Gaps = 17/334 (5%)
Query: 189 AAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVID 240
A VF EM + T+N+ I G G +++AL++FD+M + +VV++ +ID
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 241 AYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN 300
Y ++ + L R M + G+EP ++ + + G +K V +RG++
Sbjct: 249 GYCKLRKIDDGFKLLRSMA-LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSWNSLISGFAMNGMAREAVE 358
+ ++ N LI Y K G A E+ +++++ SLI G A+E
Sbjct: 308 LDEV-TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 359 NFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
+ M GL PN + +++ S G + E + +M ND P + Y +++
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGH 425
Query: 419 GRAGRLEEAEKVALQVPHE-VANDVI-WRTLLGACSVHNNVEIGQRVTEKILEIEKGHGG 476
G++E+A V + + ++ DV+ + T+L +V+ RV ++ +EKG
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM--VEKGIKP 483
Query: 477 DYVLMSNIFVGVGRYKDAERLREVIDERIAIKIP 510
D + S++ G + + ++ +E + + +P
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 22/310 (7%)
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRK 257
+++NV INGL + G ++ V M R V++ +I Y + +AL + +
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
M+ G+ P+ +T ++ ++ G + RG + R L+D +++
Sbjct: 336 MLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL-CPNERTYTTLVDGFSQK 393
Query: 318 GCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
G + A R +E+ D + ++V++N+LI+G + G +A+ E+M++ GL P+ V++
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA-----EKV 430
+VLS V+E L+ +MV I PD Y ++ R +EA E +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 431 ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV-- 488
+ +P ++ + L+ A + ++E ++ ++ +EKG D V S + G+
Sbjct: 513 RVGLP---PDEFTYTALINAYCMEGDLEKALQLHNEM--VEKGVLPDVVTYSVLINGLNK 567
Query: 489 -GRYKDAERL 497
R ++A+RL
Sbjct: 568 QSRTREAKRL 577
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 164/431 (38%), Gaps = 90/431 (20%)
Query: 97 FNNIIRCYSLSPFPHQAIHFSIHTLNHSST--FFTYSSLDTFTFAFLSQACAYSNCTRFG 154
+N +I+ Y HQA+ L H T TY+SL + C N R
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL-------IHSMCKAGNMNRAM 365
Query: 155 IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFING 210
L + + G + T L+ +S G + EA +V EM S VT+N ING
Sbjct: 366 EFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 211 LVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEP 266
G++E A++V + M+++ VVS++ V+ + R +AL + R+MVE GI+P
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-KGIKP 483
Query: 267 TEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRF 326
+T ++ K ++ + G + T ALI+ Y G +E A +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT-ALINAYCMEGDLEKALQL 542
Query: 327 FQE------IPDWRKNLVSWN--------------------------------------- 341
E +PD V N
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 342 -------SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
SLI GF M GM EA + FE+M +P+ A+ ++ G + +
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 395 FNKMVND---------CQIVPDIRHYGCVVDM------LGRAGRLEEAE--KVALQVPHE 437
+ +MV +V + G V ++ + R+ L EAE KV +++ H
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722
Query: 438 VAN-DVIWRTL 447
N DV+ L
Sbjct: 723 EGNMDVVLDVL 733
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 114/264 (43%), Gaps = 37/264 (14%)
Query: 188 EAAQVFDEMPH----RSTVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVI 239
EA +++EM T+ IN G++E AL + + M ++ VV+++++I
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
+ + ++ +A L K+ + + P++VT T+ +N+ + + + G+ K
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSLIKGFCMK--- 618
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAV 357
G + A + F+ + + + + ++N +I G G R+A
Sbjct: 619 ------------------GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 358 ENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDM 417
++ M K+G + V ++++ A G V E ++ C++ + +V++
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL-SEAEQAKVLVEI 719
Query: 418 LGRAGRLEEAEKVALQVPHEVAND 441
R G ++ V L V E+A D
Sbjct: 720 NHREGNMD----VVLDVLAEMAKD 739
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHR---STVTWNVFINGLVKWGEVELALSVFDRMRDRS- 231
++QMY GL+V+A +F+ S+ T I+ + G A +VF R+ S
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 232 ----VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
V+ + ++I AY + KAL+LF+ M + G P E T ++F +A + +
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGM-KNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ--EIPDWRKNLVSWNSLIS 345
Q + G + A+I Y + G + A ++ E + N V + SLI+
Sbjct: 570 QRILAEMLDSGCKP-GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIV 405
GFA +GM EA++ F ME+ G++ NH+ S++ A S G +EE + ++KM D +
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM-KDSEGG 687
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVI 443
PD+ ++ + G + EAE + + + DVI
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVI 725
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 132/291 (45%), Gaps = 14/291 (4%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGLVKWGEVELALSVFDRMRDRS 231
L QM + L+ EA ++ EM T+ I V+ G + A+ +++ M
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 232 V----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
V V + +I+ + +A+ FR M+E G++ + L ++ A + +G ++
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFR-MMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRK-NLVSWNSLISG 346
+ V+ K D+ +N+++ L A G + A F + + +++S+ +++
Sbjct: 675 RRVYDKM-KDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYL 733
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP 406
+ GM EA+E E M ++GL + +F V++ + G + E + F++M+ + +++
Sbjct: 734 YKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLL 793
Query: 407 DIRHYGCVVDMLGRAGRLEEAE---KVALQVPHEVANDVIWRTLLGACSVH 454
D + + +L + G EA + A +A I TL A ++
Sbjct: 794 DWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLY 844
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 11/293 (3%)
Query: 146 AYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----ST 201
A S IQ ++ + G Q + V T L++ YS G L EA +V+D+M
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDR---SVVSWTLVIDAYTRMNQPMKALALFRKM 258
N ++ G V A S+F+ +R++ V+S+ ++ Y M +A+ + +M
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Query: 259 VEVDGIEPTEVTLLTIFPAIANLGYI-KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
E G+ + + A G + + C+ H +R ++D L L K
Sbjct: 751 RE-SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL-LLDWGTFKTLFTLLKKG 808
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
G A Q + K L + + F+ G+ A+E+ + + + H A+ +
Sbjct: 809 GVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNA 868
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
V+ S G ++ LK + +M + + PDI +V + G+AG +E ++V
Sbjct: 869 VIYTYSASGDIDMALKAYMRM-QEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 150/333 (45%), Gaps = 19/333 (5%)
Query: 184 GLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVI 239
G L EA + +M + T T+N+ ++ G++E AL + ++R + T+
Sbjct: 354 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH 413
Query: 240 DAYTRMNQPMKALALFRKMV-EVD--GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEK 296
A + K +A ++ E+D I E ++ I N G + +++ E+
Sbjct: 414 RAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF---ER 470
Query: 297 RGFN-VIDIRITNALIDLYAKCGC-IESASRFF--QEIPDWRKNLVSWNSLISGFAMNGM 352
+ V+ A+ID+YA+ G +E+ + F+ + + R +++ +N +I + +
Sbjct: 471 FQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKL 530
Query: 353 AREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYG 412
+A+ F+ M+ G P+ + S+ + LV+E + +M+ D P + Y
Sbjct: 531 HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCKTYA 589
Query: 413 CVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEI 470
++ R G L +A + A++ N+V++ +L+ + VE + +++E
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMME- 647
Query: 471 EKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
E G ++++++++ + E R V D+
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 308 NALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEK 365
N LIDLY K G + A+ F E+ + V++N++I +G EA + ME+
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
G+ P+ + +LS + G +E L+++ K + + PD + V+ +L + +
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRK-IRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 426 EAEKV 430
E E V
Sbjct: 428 EVEAV 432
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 9/201 (4%)
Query: 275 FPAIANLGYIKLCQSVHGYAEKR----GFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
FP + LG KLC V E R +D R + +I++Y+ C + A F E+
Sbjct: 112 FPRL--LGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEM 169
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
P ++N +W ++I A NG A++ F + G +P+ F +V AC G + E
Sbjct: 170 P--KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINE 227
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA 450
GL F M D +V + Y V++ML G L+EA ++ E + + +W TL+
Sbjct: 228 GLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVE-MWETLMNL 286
Query: 451 CSVHNNVEIGQRVTEKILEIE 471
C V +E+G R E I +++
Sbjct: 287 CWVQGYLELGDRFAELIKKLD 307
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 128/275 (46%), Gaps = 14/275 (5%)
Query: 189 AAQVFDEMPHRSTV----TWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVID 240
AA++ D++P + + + ++ + G+ E A+ +F+RM++ ++V++ +++D
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 241 AYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN 300
+ +M + + + + G++ E T T+ A A G ++ + + G+
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVE 358
+ NAL+ ++ K G A +E+ + + V++N L++ + G ++EA
Sbjct: 314 PGTV-TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 359 NFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
E M K G+ PN + + +V+ A G +E LK F M + VP+ Y V+ +L
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLL 431
Query: 419 GRAGRLEEAEKVALQVPHE--VANDVIWRTLLGAC 451
G+ R E K+ + N W T+L C
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 122/318 (38%), Gaps = 46/318 (14%)
Query: 133 LDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQV 192
D FT + + ACA R + A + G++ LLQ++ G+ EA V
Sbjct: 279 FDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV 338
Query: 193 FDEMPHRS----TVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTR 244
EM S +VT+N + V+ G + A V + M + V +++T VIDAY +
Sbjct: 339 LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
Query: 245 MNQPMKALALFRKMVEV----------------------------------DGIEPTEVT 270
+ +AL LF M E +G P T
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT 458
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
T+ N G K V + GF D N LI Y +CG AS+ + E+
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFREMKSCGFEP-DRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 331 PDWRKN--LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
N + ++N+L++ A G R +M+ G +P ++ S++ C G
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY-SLMLQCYAKGGN 576
Query: 389 EEGLKFFNKMVNDCQIVP 406
G++ + + QI P
Sbjct: 577 YLGIERIENRIKEGQIFP 594
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 129/298 (43%), Gaps = 17/298 (5%)
Query: 145 CAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS---- 200
C +F ++ + GF+ L+ Y G V+A++++ EM
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 525
Query: 201 TVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFR 256
T+N +N L + G+ +V M+ + + S++L++ Y + + +
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL-GIERIE 584
Query: 257 KMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYA--EKRGFNVIDIRITNALIDLY 314
++ I P+ + L T+ +AN L S + +K G+ D+ I N+++ ++
Sbjct: 585 NRIKEGQIFPSWMLLRTLL--LANFKCRALAGSERAFTLFKKHGYKP-DMVIFNSMLSIF 641
Query: 315 AKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
+ + A + I + +LV++NSL+ + G +A E + +EK+ L+P+
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 373 VAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
V++ +V+ GL++E ++ ++M I P I Y V G E E V
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTER-GIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 18/275 (6%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLL---------V 187
T+ L A A R G + + + GF+ + +LQ Y+ GG +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 188 EAAQVFDE-MPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR-SVVSWTLVIDAYTRM 245
+ Q+F M R+ + N L E A ++F + + +V + ++ +TR
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAG---SERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
N +A + + E DG+ P VT ++ G + + EK D+
Sbjct: 645 NMYDQAEGILESIRE-DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP-DLV 702
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDW--RKNLVSWNSLISGFAMNGMAREAVENFENM 363
N +I + + G ++ A R E+ + R + ++N+ +SG+ GM E + E M
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
K RPN + F V+ G E + F +K+
Sbjct: 763 AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 48/285 (16%)
Query: 188 EAAQVFDEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVI 239
EA + D M R T+ +NGL K G+++LALS+ +M + VV +T +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
DA AL LF +M + GI P VT ++ + N G + +R
Sbjct: 263 DALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEI----------------------------- 330
N ++ +ALID + K G + A + + E+
Sbjct: 322 NP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 331 --------PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
D N+V++N+LI GF E +E F M + GL N V + +++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
G + K F KMV+D + PDI Y ++D L + G+LE+A
Sbjct: 441 FQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKA 484
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 14/282 (4%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGL 211
+L+ + K ++ + L+ + + L EA +F+ M + + VT+N I G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 212 VKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
K VE + +F M R +V ++ +I + A +F+KMV DG+ P
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPD 464
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+T + + G ++ V Y +K DI N +I+ K G +E F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 328 --QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+ + N++ + ++ISGF G+ EA F M++ G PN + +++ A
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
G + +M C V D V++ML GRLE++
Sbjct: 584 GDKAASAELIKEM-RSCGFVGDASTISMVINML-HDGRLEKS 623
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 202/456 (44%), Gaps = 36/456 (7%)
Query: 88 HNTSTSLLLFNNIIR---CYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLS 142
+ T+T++++F C++++ + + IHF + + + L +T +S
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASY-NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 143 QACAYSNCTRFG-----IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+ + RFG +L ++ + G + + Y+ ++ + L EA + F EM
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 198 HR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPM 249
+ TV + I+G K G++ A F M R V+++T +I + ++ +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+A LF +M G+EP VT + G++K VH + + G + ++
Sbjct: 404 EAGKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTT 461
Query: 310 LIDLYAKCGCIESASRFFQEIPDWR----KNLVSWNSLISGFAMNGMAREAVENFENMEK 365
LID K G ++SA+ E+ W+ N+ ++NS+++G +G EAV+ E
Sbjct: 462 LIDGLCKEGDLDSANELLHEM--WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
AGL + V + +++ A G +++ + +M+ + P I + +++ G LE
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 426 EAEKVA--LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSN 483
+ EK+ + N + +L+ + NN++ + + + +G G D N
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYEN 636
Query: 484 IFVGVGRYKDAER----LREVIDERIAIKIPGYSLL 515
+ G + ++ + +E+ + ++ + YS+L
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 127/300 (42%), Gaps = 40/300 (13%)
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAY-TRMNQPMKALALFRKMVEVD 262
++VF LV +G + A VF++M + +V + Y TR+++ A
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--------- 228
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
T + + FP + +C +V Y N +I + G I+
Sbjct: 229 ----TAIIVFREFPEVG------VCWNVASY--------------NIVIHFVCQLGRIKE 264
Query: 323 ASRFF--QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
A E+ + +++S++++++G+ G + + E M++ GL+PN + S++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV-PHEVA 439
+ E + F++M+ I+PD Y ++D + G + A K ++ ++
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 440 NDVIWRTLL--GACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERL 497
DV+ T + G C + + VE G+ E + + + + N + G KDA R+
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 202/456 (44%), Gaps = 36/456 (7%)
Query: 88 HNTSTSLLLFNNIIR---CYSLSPFPHQAIHF--SIHTLNHSSTFFTYSSLDTFTFAFLS 142
+ T+T++++F C++++ + + IHF + + + L +T +S
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASY-NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 143 QACAYSNCTRFG-----IQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
+ + RFG +L ++ + G + + Y+ ++ + L EA + F EM
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 198 HR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPM 249
+ TV + I+G K G++ A F M R V+++T +I + ++ +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+A LF +M G+EP VT + G++K VH + + G + ++
Sbjct: 404 EAGKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTT 461
Query: 310 LIDLYAKCGCIESASRFFQEIPDWR----KNLVSWNSLISGFAMNGMAREAVENFENMEK 365
LID K G ++SA+ E+ W+ N+ ++NS+++G +G EAV+ E
Sbjct: 462 LIDGLCKEGDLDSANELLHEM--WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 366 AGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLE 425
AGL + V + +++ A G +++ + +M+ + P I + +++ G LE
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 426 EAEKVA--LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSN 483
+ EK+ + N + +L+ + NN++ + + + +G G D N
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYEN 636
Query: 484 IFVGVGRYKDAER----LREVIDERIAIKIPGYSLL 515
+ G + ++ + +E+ + ++ + YS+L
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 127/300 (42%), Gaps = 40/300 (13%)
Query: 204 WNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAY-TRMNQPMKALALFRKMVEVD 262
++VF LV +G + A VF++M + +V + Y TR+++ A
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--------- 228
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
T + + FP + +C +V Y N +I + G I+
Sbjct: 229 ----TAIIVFREFPEVG------VCWNVASY--------------NIVIHFVCQLGRIKE 264
Query: 323 ASRFF--QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLS 380
A E+ + +++S++++++G+ G + + E M++ GL+PN + S++
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 381 ACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV-PHEVA 439
+ E + F++M+ I+PD Y ++D + G + A K ++ ++
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 440 NDVIWRTLL--GACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERL 497
DV+ T + G C + + VE G+ E + + + + N + G KDA R+
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPMKALALFRKMV 259
+ V +N ++ L K G+V A S+ M++ + V++ ++I AY + ++++ L K
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 260 EVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGC 319
+ G P VT+ + + N G + V E +G V D+ N L+ Y G
Sbjct: 276 SL-GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV-DVVACNTLVKGYCALGK 333
Query: 320 IESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
+ A RFF E+ + N+ ++N LI+G+ GM A++ F +M+ +R N F +
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIV--PDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
++ S GG ++GLK +M+ D V I Y CV+ + R E+A + L++
Sbjct: 394 LIRGLSIGGRTDDGLKIL-EMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 20/331 (6%)
Query: 111 HQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHV 170
A++F I +++ FF D +TF L + + I++ ++ + G+ V
Sbjct: 276 EDALNF-IQEMSNQDGFFP----DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 171 YVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDR 226
Y ++ G + EA +V D+M R +TVT+N I+ L K +VE A +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 227 MRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
+ + V ++ +I A+ LF +M G EP E T + ++ + G
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKG 449
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSW 340
+ ++ E G + N LID + K A F E+ +N V++
Sbjct: 450 KLDEALNMLKQMELSGC-ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 341 NSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV- 399
N+LI G + +A + + M G +P+ + S+L+ GG +++ M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N C+ PDI YG ++ L +AGR+E A K+
Sbjct: 569 NGCE--PDIVTYGTLISGLCKAGRVEVASKL 597
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 148/336 (44%), Gaps = 24/336 (7%)
Query: 186 LVEAAQVFDEMPHRSTV----TWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTL 237
L A + ++MP V T+ + G ++ G+++ AL + ++M + S VS +
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 238 VIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKR 297
++ + + + AL ++M DG P + T T+ + G++K + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 298 GFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMARE 355
G++ D+ N++I K G ++ A ++ D N V++N+LIS E
Sbjct: 325 GYDP-DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND-CQIVPDIRHYGCV 414
A E + G+ P+ F S++ ++ F +M + C+ PD Y +
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE--PDEFTYNML 441
Query: 415 VDMLGRAGRLEEAEKVALQVP-HEVANDVI-WRTLL-GACSVHNNVEIGQRVTEKILEIE 471
+D L G+L+EA + Q+ A VI + TL+ G C + R E+I +
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT-----REAEEIFDEM 496
Query: 472 KGHG--GDYVLMSNIFVGVGRYKDAERLREVIDERI 505
+ HG + V + + G+ + + E +++D+ I
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 157/327 (48%), Gaps = 55/327 (16%)
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALF 255
+ VT+ I+G K G++E+A+S++ MR +VV++T +ID + + + +A ++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
+MVE D +EP + TI ID +
Sbjct: 257 SRMVE-DRVEPNSLVYTTI------------------------------------IDGFF 279
Query: 316 KCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
+ G ++A +F ++ + R ++ ++ +ISG NG +EA E E+MEK+ L P+ V
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ 433
F ++++A G ++ + ++K++ PD+ ++D + + G+L EA +
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMIDGIAKNGQLHEA---IVY 395
Query: 434 VPHEVANDVIWRTLLGA-CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV---G 489
E ANDV++ L+ A C + +E+ +R+ KI E G D + ++ G+ G
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEV-ERLFSKI--SEAGLVPDKFMYTSWIAGLCKQG 452
Query: 490 RYKDAERLR-EVIDERIAIKIPGYSLL 515
DA +L+ ++ E + + + Y+ L
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTL 479
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 190 AQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVVS----WTLVIDAYTRM 245
A++ ++ + V I+GL G+++ A + + M +V +T +++AY +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
+ A+ ++ K++E G EP V L T+ IA G +L +++ + ++ +V+
Sbjct: 352 GRMKAAVNMYHKLIE-RGFEPDVVALSTMIDGIAKNG--QLHEAIVYFCIEKANDVM--- 405
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENM 363
LID K G R F +I + + + S I+G G +A + M
Sbjct: 406 -YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
+ GL + +A+ +++ + GL+ E + F++M+N I PD + ++ + G
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS-GISPDSAVFDLLIRAYEKEGN 523
Query: 424 LEEAEKVALQV 434
+ A + L +
Sbjct: 524 MAAASDLLLDM 534
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIES 322
G P + ++ + LG +K + + + G D+ N+LID + + G I S
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEP-DVISYNSLIDGHCRNGDIRS 109
Query: 323 ASRFFQEIPD-----WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
AS + + + ++VS+NSL +GF+ M E M K PN V + +
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYST 168
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ G ++ LK F+ M D + P++ + C++D +AG LE A
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRD-ALSPNVVTFTCLIDGYCKAGDLEVA 217
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 49/311 (15%)
Query: 188 EAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVI 239
EA + D M R + VT+ V +NGL K G+++LA ++ ++M + VV + +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG-YIKLCQSVHGYAEKR- 297
D+ + AL LF++M E GI P VT ++ + + G + Q + EK+
Sbjct: 193 DSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 298 -----GFNVI---------------------------DIRITNALIDLYAKCGCIESASR 325
FN + DI N+LI+ + ++ A +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 326 FFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACS 383
F+ + D +L ++N+LI GF + + E F M GL + V + +++
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 384 HGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV-ALQVPHEVANDV 442
H G + K F +MV+D + PDI Y ++D L G+LE+A +V E+ D+
Sbjct: 372 HDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 443 -IWRTLL-GAC 451
I+ T++ G C
Sbjct: 431 YIYTTMIEGMC 441
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 20/285 (7%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGL 211
+LH + K ++ L+ + + L +A Q+F+ M + T+N I G
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 212 VKWGEVELALSVFDRMRDRSVVSWTLVIDAYTRMNQPM-------KALALFRKMVEVDGI 264
K VE +F M R +V T+ YT + Q + A +F++MV DG+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTV---TYTTLIQGLFHDGDCDNAQKVFKQMVS-DGV 391
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
P +T + + N G ++ V Y +K +DI I +I+ K G ++
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK-LDIYIYTTMIEGMCKAGKVDDGW 450
Query: 325 RFF--QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
F + + N+V++N++ISG + +EA + M++ G P+ + +++ A
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
G + +M C+ V D G V +ML GRL+++
Sbjct: 511 LRDGDKAASAELIREM-RSCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 147/317 (46%), Gaps = 47/317 (14%)
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKAL 252
P S +N ++ + K + +L +S+ ++M+ ++ ++ ++I+ + R +Q AL
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA--L 310
AL KM+++ G EP+ VTL ++ ++GY + RI++A L
Sbjct: 66 ALLGKMMKL-GYEPSIVTLSSL---------------LNGYCHGK-------RISDAVAL 102
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D + G +R + +++ +LI G ++ A EAV + M + G +P
Sbjct: 103 VDQMVEMG--------------YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N V + V++ G ++ NKM +I D+ + ++D L + +++A +
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 431 --ALQVPHEVANDVIWRTLLGA-CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVG 487
++ N V + +L+ CS + Q +++ I + + + + + FV
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 488 VGRYKDAERLREVIDER 504
G++ +AE+L + + +R
Sbjct: 268 EGKFVEAEKLHDDMIKR 284
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 116/272 (42%), Gaps = 11/272 (4%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELA 220
G + +V + L+ G +A+Q+ +M + + VT+N I+ VK G+ A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 221 LSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+ D M RS+ ++ +I+ + ++ KA +F MV D P T T+
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIK 333
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW-RK 335
++ + RG + T + L+ C + F Q + D
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
++++++ L+ G NG +A+E F+ M+K+ ++ + + +++ G V++G F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ + P++ Y ++ L L+EA
Sbjct: 454 CSLSLK-GVKPNVVTYNTMISGLCSKRLLQEA 484
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST----VTWNVFINGLVKWGEVELA 220
G + VYV L++ YS G AA++F M H ++N+ ++ + G A
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 221 LSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+VF+ M+ + S L++ AY++ K A+ ++M E +G+EP L ++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE-NGVEPDTFVLNSMLN 469
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD--WR 334
LG + + E G DI N LI++Y K G +E F E+ + +R
Sbjct: 470 LYGRLGQFTKMEKILAEMEN-GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 528
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE---G 391
++V+W S I ++ + + +E FE M +G P+ +LSACS VE+
Sbjct: 529 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 588
Query: 392 LKFFNKMVNDCQIVPDI 408
L+ +K V +VP +
Sbjct: 589 LRTMHKGVTVSSLVPKL 605
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 21/346 (6%)
Query: 176 LLQMYSIGGLLVEAAQVFDEM------PHRSTVT-WNVFINGLVKW-GEVELALSVFDRM 227
L++ Y + GL+ A V EM P VT +N +I GL+K G E A+ VF RM
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 228 -RDR---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY 283
RDR + ++ L+I+ Y + ++ + L+ +M +P T + A A G
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGL 336
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSWN 341
+ + + ++ G D+ + NAL++ Y++ G A+ F + + S+N
Sbjct: 337 CEKAEEIFEQLQEDGLEP-DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 395
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND 401
++ + G+ +A FE M++ G+ P + + +LSA S V + +M +
Sbjct: 396 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 455
Query: 402 CQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH-EVANDVIWRTLLGACSVHNNVEIG 460
+ PD ++++ GR G+ + EK+ ++ + D+ +L +++
Sbjct: 456 -GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL--INIYGKAGFL 512
Query: 461 QRVTEKILEI-EKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERI 505
+R+ E +E+ EK D V ++ R K + EV +E I
Sbjct: 513 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST----VTWNVFINGLVKWGEVELA 220
G + VYV L++ YS G AA++F M H ++N+ ++ + G A
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 221 LSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
+VF+ M+ + S L++ AY++ K A+ ++M E +G+EP L ++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE-NGVEPDTFVLNSMLN 447
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD--WR 334
LG + + E G DI N LI++Y K G +E F E+ + +R
Sbjct: 448 LYGRLGQFTKMEKILAEMEN-GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE---G 391
++V+W S I ++ + + +E FE M +G P+ +LSACS VE+
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 566
Query: 392 LKFFNKMVNDCQIVPDI 408
L+ +K V +VP +
Sbjct: 567 LRTMHKGVTVSSLVPKL 583
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 21/346 (6%)
Query: 176 LLQMYSIGGLLVEAAQVFDEM------PHRSTVT-WNVFINGLVKW-GEVELALSVFDRM 227
L++ Y + GL+ A V EM P VT +N +I GL+K G E A+ VF RM
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 228 -RDR---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY 283
RDR + ++ L+I+ Y + ++ + L+ +M +P T + A A G
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGL 314
Query: 284 IKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSWN 341
+ + + ++ G D+ + NAL++ Y++ G A+ F + + S+N
Sbjct: 315 CEKAEEIFEQLQEDGLEP-DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 373
Query: 342 SLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVND 401
++ + G+ +A FE M++ G+ P + + +LSA S V + +M +
Sbjct: 374 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN 433
Query: 402 CQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPH-EVANDVIWRTLLGACSVHNNVEIG 460
+ PD ++++ GR G+ + EK+ ++ + D+ +L +++
Sbjct: 434 -GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL--INIYGKAGFL 490
Query: 461 QRVTEKILEI-EKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERI 505
+R+ E +E+ EK D V ++ R K + EV +E I
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 148/325 (45%), Gaps = 28/325 (8%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
DT TF+ L + L + ++ + + + L+ + G + EA +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 194 DEMP----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRM 245
D M VT+ +N L K G LAL +F +M +R SVV +++VID+ +
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI-DI 304
AL+LF +M E+ GI+ VT ++ + N G K E G N+I D+
Sbjct: 259 GSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDG--KWDDGAKMLREMIGRNIIPDV 315
Query: 305 RITNALIDLYAKCGCIESASRFFQEI------PDWRKNLVSWNSLISGFAMNGMAREAVE 358
+ALID++ K G + A + E+ PD +++NSLI GF EA +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT----ITYNSLIDGFCKENCLHEANQ 371
Query: 359 NFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
F+ M G P+ V + ++++ V++G++ F + ++ ++P+ Y +V
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE-ISSKGLIPNTITYNTLVLGF 430
Query: 419 GRAGRLEEA-----EKVALQVPHEV 438
++G+L A E V+ VP V
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSV 455
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 135/326 (41%), Gaps = 52/326 (15%)
Query: 184 GLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRS----VVSW 235
G +A +F+EM + VT++ I GL G+ + + M R+ VV++
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
+ +ID + + + ++A L+ +M+ GI P +T ++ + +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMA 353
+G DI + LI+ Y K ++ R F+EI N +++N+L+ GF +G
Sbjct: 378 SKGCEP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM--------------- 398
A E F+ M G+ P+ V + +L G + + L+ F KM
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 399 -------------------VNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV----- 434
++D + PD+ Y ++ L + G L EA+ + ++
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 435 -PHEVANDVIWRTLLGACSVHNNVEI 459
P + +++ R LG + ++VE+
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVEL 582
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 209/496 (42%), Gaps = 65/496 (13%)
Query: 72 QVHSHI-TTSGLFHH--PFHNTSTSLLLFNNIIRCYSLSPFPHQAIHFSIHTLNH----- 123
++HS T+S L H+ + T L+ II Y S Q+++ SI N
Sbjct: 69 KIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQS----QSLNLSISYFNEMVDNG 124
Query: 124 -----------------SSTFFTYSS----------LDTFTFAFLSQACAYSNCTRFGIQ 156
SS+F + S LD ++F L + C +
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 157 LHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGLV 212
L + + GF +V + T L+ G + +A +F EM V T+ V INGL
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 213 KWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTE 268
K G + ++++M++ V ++ V++ + + A +F +M E G+
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE-RGVSCNI 303
Query: 269 VTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQ 328
VT T+ + + V + G N ++ N LID + G + A +
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINP-NLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 329 EIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
++ +LV++N L+SGF G A + + ME+ G++P+ V + ++ +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIW 444
+E+ ++ M + +VPD+ Y ++ G++ EA ++ ++ + N+VI+
Sbjct: 423 NMEKAIQLRLSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 445 RTL-LGAC---SVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE- 499
T+ LG C S + +++ + + EK L + Y M + + K+AERL E
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKEL---APNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 500 VIDERIAIKIPGYSLL 515
+ID I P S+L
Sbjct: 539 MIDSGID---PSTSIL 551
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 145/317 (45%), Gaps = 15/317 (4%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST----VTWNVFINGLVKWGE 216
+F G+Q + L+ + EA + D M + VT+ V +NGL K G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 217 VELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+LA ++ ++M + V+ + +ID + AL LF++M E GI P VT
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYS 295
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI-- 330
++ + N G + +R N D+ +ALID + K G + A + + E+
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINP-DVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 331 PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
++V+++SLI+GF M+ EA + FE M P+ V + +++ VEE
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 391 GLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVA--NDVIWRTLL 448
G++ F +M +V + Y ++ L +AG + A+++ ++ + N + + TLL
Sbjct: 415 GMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 449 GACSVHNNVEIGQRVTE 465
+ +E V E
Sbjct: 474 DGLCKNGKLEKAMVVFE 490
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 14/304 (4%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FTF+ L A +L+ + K + + L+ + + L EA Q+F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 194 DEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRM 245
+ M + VT+N I G K+ VE + VF M R +V ++ ++I +
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
A +F++MV DG+ P +T T+ + G ++ V Y ++ I
Sbjct: 445 GDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IY 502
Query: 306 ITNALIDLYAKCGCIESASRFF--QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
N +I+ K G +E F + + ++V++N++ISGF G EA F+ M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 364 EKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGR 423
++ G PN + +++ A G E + +M C D G V +ML GR
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM-RSCGFAGDASTIGLVTNML-HDGR 620
Query: 424 LEEA 427
L+++
Sbjct: 621 LDKS 624
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 158/364 (43%), Gaps = 50/364 (13%)
Query: 186 LVEAAQVFDEM----PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTL 237
L +A +F EM P S + ++ ++ + K + ++ +S+ ++M++ + ++++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 238 VIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQS------VH 291
+I+ + R +Q ALA+ KM+++ G EP VTL ++ + I + V
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 292 GYAEKR-GFNVI--------DIRITNALIDLYAKCGC-------------------IESA 323
GY FN + ALID GC + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 324 SRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
++ + ++ +N++I G +A+ F+ ME G+RPN V + S++S
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 382 CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVAND 441
+ G + + + M+ +I PD+ + ++D + G+L EAEK+ ++ +
Sbjct: 301 LCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 442 --VIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLRE 499
V + +L+ +H+ ++ +++ E + K D V + + G +YK E E
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFE--FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 500 VIDE 503
V E
Sbjct: 418 VFRE 421
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 131/298 (43%), Gaps = 15/298 (5%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELA 220
G + +V + L+ G +A+++ +M R T++ I+ VK G++ A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 221 LSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
++D M RS+ V+++ +I+ + ++ +A +F MV P VT T+
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIK 404
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWR 334
++ V +RG V + N LI + G + A F+E+
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGL-VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
N++++N+L+ G NG +A+ FE ++++ + P + ++ G VE+G
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 395 FNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGA 450
F + + PD+ Y ++ R G EEA+ + ++ + + N + TL+ A
Sbjct: 524 FCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR- 230
L+ +++ G L A ++ M T T++V IN L K G + A +F M D+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 231 ---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
++V++ +++D + + AL L+R M G EP +VT + + + GY++
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLIS 345
++V +++ + + D + L+DL+ K G +E A +++Q + R N+ + NSL+S
Sbjct: 559 EAVFTEMQQKNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
F EA E +NM GLRP+ + +LS C+ G
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
+ V++ +I +Y R N +A+ +F +M E G +P VT T+ A G++ + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW--RKNLVSWNSLISGFA 348
+ + G + D + +I+ K G + +A + F E+ D NLV++N ++ A
Sbjct: 457 YQRMQAGGLSP-DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+ A++ + +M+ AG P+ V + V+ H G +EE F +M +PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDE 574
Query: 409 RHYGCVVDMLGRAGRLEEA 427
YG +VD+ G+AG +E+A
Sbjct: 575 PVYGLLVDLWGKAGNVEKA 593
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR- 230
L+ +++ G L A ++ M T T++V IN L K G + A +F M D+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 231 ---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
++V++ +++D + + AL L+R M G EP +VT + + + GY++
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLIS 345
++V +++ + + D + L+DL+ K G +E A +++Q + R N+ + NSL+S
Sbjct: 559 EAVFTEMQQKNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
F EA E +NM GLRP+ + +LS C+ G
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
+ V++ +I +Y R N +A+ +F +M E G +P VT T+ A G++ + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW--RKNLVSWNSLISGFA 348
+ + G + D + +I+ K G + +A + F E+ D NLV++N ++ A
Sbjct: 457 YQRMQAGGLSP-DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+ A++ + +M+ AG P+ V + V+ H G +EE F +M +PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDE 574
Query: 409 RHYGCVVDMLGRAGRLEEA 427
YG +VD+ G+AG +E+A
Sbjct: 575 PVYGLLVDLWGKAGNVEKA 593
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 48/342 (14%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS----TVTWNVFINGLVKWGE 216
+ GF +VYV L+ + G + +A +VFDE+ RS V++N ING K G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 217 VELALSV---FDRMRDR-SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
++ + ++ R R V +++ +I+A + N+ A LF +M + G+ P +V
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK-RGLIPNDVIFT 349
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGF------------------------NVIDIRITN 308
T+ + G I L + + +G N++D I
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 309 A----------LIDLYAKCGCIESASRFFQEIPDWRKNL--VSWNSLISGFAMNGMAREA 356
LID + + G +E+A +E+ L V +++L+ G G +A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 357 VENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVD 416
M +AG++P+ V + ++ A G + G K +M +D VP + Y +++
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH-VPSVVTYNVLLN 528
Query: 417 MLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNN 456
L + G+++ A+ + A+ V +D+ + TLL H N
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 109/231 (47%), Gaps = 8/231 (3%)
Query: 279 ANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD--WRKN 336
+LG+I + K F+V IR L+D K + F+ EI D + N
Sbjct: 181 TDLGFIPDAIQCFRLSRKHRFDV-PIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLN 239
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+ +N L++ F G +A + F+ + K L+P V+F ++++ G ++EG + +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 397 KMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGACSVH 454
+M + PD+ Y +++ L + +++ A + ++ + NDVI+ TL+ S +
Sbjct: 300 QM-EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 455 NNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERI 505
+++ + +K+L KG D VL + + G + D R ++D I
Sbjct: 359 GEIDLMKESYQKML--SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR- 230
L+ +++ G L A ++ M T T++V IN L K G + A +F M D+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 231 ---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
++V++ +++D + + AL L+R M G EP +VT + + + GY++
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA-GFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLIS 345
++V +++ + + D + L+DL+ K G +E A +++Q + R N+ + NSL+S
Sbjct: 559 EAVFTEMQQKNW-IPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
F EA E +NM GLRP+ + +LS C+ G
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
+ V++ +I +Y R N +A+ +F +M E G +P VT T+ A G++ + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW--RKNLVSWNSLISGFA 348
+ + G + D + +I+ K G + +A + F E+ D NLV++N ++ A
Sbjct: 457 YQRMQAGGLSP-DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
+ A++ + +M+ AG P+ V + V+ H G +EE F +M +PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDE 574
Query: 409 RHYGCVVDMLGRAGRLEEA 427
YG +VD+ G+AG +E+A
Sbjct: 575 PVYGLLVDLWGKAGNVEKA 593
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
++ MY G +A +VF M + STVT+N ++ + EV ++D+M+
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSD 309
Query: 232 ----VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
VVS+ L+I AY R + +AL++F +M++ G+ PT + A A G ++
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQA 368
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSWNSLIS 345
++V + +R D+ ++ Y +E A +FF+ I + N+V++ +LI
Sbjct: 369 KTVFK-SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIV 405
G+A + +E +E M +G++ N +++ A L ++ +M C +
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGVP 486
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKV 430
PD + ++ + LEEA+++
Sbjct: 487 PDQKAKNVLLSLASTQDELEEAKEL 511
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 218 ELALSVFDRMRDR-SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
E LSV +M +V+S+T ++++Y R + A A+FR+M + G EP+ +T I
Sbjct: 159 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM-QSSGPEPSAITYQIILK 217
Query: 277 AIANLGYIKLCQSVHG--YAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI---- 330
K + V EK+ D ++ + +I +Y K G E A + F +
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 331 ------------------------------PDWRKNLVSWNSLISGFAMNGMAREAVENF 360
D + ++VS+ LI + EA+ F
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 337
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGR 420
E M AG+RP H A+ +L A + G+VE+ F M D +I PD+ Y ++
Sbjct: 338 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVN 396
Query: 421 AGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDY 478
A +E AEK ++V N V + TL+ + N+VE V EK+ G +
Sbjct: 397 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR--LSGIKANQ 454
Query: 479 VLMSNIFVGVGRYKD 493
+++ I GR K+
Sbjct: 455 TILTTIMDASGRCKN 469
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
++ MY G +A +VF M + STVT+N ++ + EV ++D+M+
Sbjct: 260 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSD 316
Query: 232 ----VVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
VVS+ L+I AY R + +AL++F +M++ G+ PT + A A G ++
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQA 375
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSWNSLIS 345
++V + +R D+ ++ Y +E A +FF+ I + N+V++ +LI
Sbjct: 376 KTVFK-SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIV 405
G+A + +E +E M +G++ N +++ A L ++ +M C +
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGVP 493
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKV 430
PD + ++ + LEEA+++
Sbjct: 494 PDQKAKNVLLSLASTQDELEEAKEL 518
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 218 ELALSVFDRMRDR-SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
E LSV +M +V+S+T ++++Y R + A A+FR+M + G EP+ +T I
Sbjct: 166 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM-QSSGPEPSAITYQIILK 224
Query: 277 AIANLGYIKLCQSVHG--YAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI---- 330
K + V EK+ D ++ + +I +Y K G E A + F +
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 331 ------------------------------PDWRKNLVSWNSLISGFAMNGMAREAVENF 360
D + ++VS+ LI + EA+ F
Sbjct: 285 VPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 344
Query: 361 ENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGR 420
E M AG+RP H A+ +L A + G+VE+ F M D +I PD+ Y ++
Sbjct: 345 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVN 403
Query: 421 AGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDY 478
A +E AEK ++V N V + TL+ + N+VE V EK+ G +
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR--LSGIKANQ 461
Query: 479 VLMSNIFVGVGRYKD 493
+++ I GR K+
Sbjct: 462 TILTTIMDASGRCKN 476
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 150/377 (39%), Gaps = 87/377 (23%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD- 194
+T+ L + + L + K+G++ + + LL Y G + +A + D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 195 --EMPHR------------------------------------STVTWNVFINGLVKWGE 216
EM +R + VT+ V +NGL K G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 217 VELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+LAL++ ++M + VV + +ID+ + AL LF++M E GI P VT
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 299
Query: 273 TIFPAIANLG-YIKLCQSVHGYAEKR-GFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
++ + + G + Q + EK+ N++ NALID + K G A + + ++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF---NALIDAFVKEGKFVEAEKLYDDM 356
Query: 331 -------------------------------------PDWRKNLVSWNSLISGFAMNGMA 353
D ++V++N+LI GF +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
+ E F M GL + V + +++ H G + K F +MV+D + PDI Y
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSI 475
Query: 414 VVDMLGRAGRLEEAEKV 430
++D L G+LE+A +V
Sbjct: 476 LLDGLCNNGKLEKALEV 492
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 148/317 (46%), Gaps = 47/317 (14%)
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKAL 252
P S V +N ++ + K + ++ +S+ ++M+ +V ++ ++I+ + R +Q AL
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA--L 310
AL KM+++ G EP+ VTL ++ ++GY + RI++A L
Sbjct: 141 ALLGKMMKL-GYEPSIVTLSSL---------------LNGYCHGK-------RISDAVAL 177
Query: 311 IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRP 370
+D + G +R + +++ +LI G ++ A EAV + M + G +P
Sbjct: 178 VDQMVEMG--------------YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 371 NHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
N V + V++ G + L NKM +I D+ + ++D L + +++A +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 431 --ALQVPHEVANDVIWRTLLGA-CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVG 487
++ N V + +L+ CS + Q +++ I + + + + + FV
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 488 VGRYKDAERLREVIDER 504
G++ +AE+L + + +R
Sbjct: 343 EGKFVEAEKLYDDMIKR 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 129/297 (43%), Gaps = 13/297 (4%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELA 220
G + +V + L+ G +A+Q+ +M + + VT+N I+ VK G+ A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 221 LSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
++D M RS+ ++ +++ + ++ KA +F MV D P VT T+
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIK 408
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW-RK 335
++ + RG + T + L+ C + F Q + D
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
++++++ L+ G NG +A+E F+ M+K+ ++ + + +++ G V++G F
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGA 450
+ + P++ Y ++ L L+EA + ++ + + N + TL+ A
Sbjct: 529 CSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 48/312 (15%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELA 220
GF+F + + Y GG LV+A EM +R V++++ I+GL K G VE A
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 221 LSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
L + +M V +++T +I +M + +A LF +++ V GIE E +T+
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV-GIEVDEFLYVTLID 355
Query: 277 AIANLGYIKLCQSVHGYAEKRG-------FNVI----------------------DIRIT 307
I G + S+ G E+RG +N + D+
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITY 415
Query: 308 NALIDLYAKCGCIESA----SRFFQ-EIPDWRKNLVSWNSLISGFAMNGMAREAVENFEN 362
+ L+D Y K I++ RF + +IP +LV N L+ F + G EA +
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIP---MDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 363 MEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
M + L P+ + +++ G +EE L+ FN++ V Y ++D L + G
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS--VSAAVCYNRIIDALCKKG 530
Query: 423 RLEEAEKVALQV 434
L+ A +V +++
Sbjct: 531 MLDTATEVLIEL 542
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 15/319 (4%)
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRDRSV------VSWTLVIDAYTRMNQPMKALA 253
S++T+ I V+ GE++ A+ V + M +++V + VI + ++ +P AL
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 254 LFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDL 313
F V+ + P VT T+ A+ LG + + + E GF D + I
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE-FDCVFYSNWIHG 251
Query: 314 YAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
Y K G + A +E+ + +++VS++ LI G + G EA+ M K G+ PN
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
+ + +++ G +EE FN++++ I D Y ++D + R G L A
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILS-VGIEVDEFLYVTLIDGICRKGNLNR----A 366
Query: 432 LQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRY 491
+ ++ I ++L +V N + + RV+E E+ KG GD + S + +
Sbjct: 367 FSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD-EVSKGVVGDVITYSTLLDSYIKV 425
Query: 492 KDAERLREVIDERIAIKIP 510
++ + + E+ + KIP
Sbjct: 426 QNIDAVLEIRRRFLEAKIP 444
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 336 NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFF 395
N +++NSLI+G G EA+ F+++E GL P+ V + ++ GL + K
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 396 NKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
+ MV+ +VP+I Y +VD + G+ E+A +V
Sbjct: 749 DSMVSK-GLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 185 LLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVID 240
L+V A + + + + + INGL K G + AL++ + R V +++ +I+
Sbjct: 641 LVVNAGET--TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 241 AYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN 300
+ ++AL LF + + G+ P+EVT + + G + + +G
Sbjct: 699 GLCQQGCLVEALRLFDSLENI-GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL- 756
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVE 358
V +I I N+++D Y K G E A R R + + +S+I G+ G EA+
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 816
Query: 359 NFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
F + + + FL ++ G +EE +M+
Sbjct: 817 VFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 152/321 (47%), Gaps = 17/321 (5%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFD---EMPHRST-VTWNVFINGLVKWGE 216
+ K+G++ + LL + + EA ++ D EM H+ T +T N +NGL G+
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 217 VELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
V A+ + DRM + V++ V++ + Q A+ L RKM E + I+ V
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYS 267
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
I + G + ++ E +GF DI N LI + G + ++ +++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKA-DIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 333 WR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEE 390
+ N+V+++ LI F G REA + + M + G+ PN + + S++ +EE
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 391 GLKFFNKMVND-CQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTL 447
++ + M++ C PDI + +++ +A R+++ ++ + + +AN V + TL
Sbjct: 387 AIQMVDLMISKGCD--PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 448 LGACSVHNNVEIGQRVTEKIL 468
+ +E+ +++ ++++
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMV 465
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 123/262 (46%), Gaps = 13/262 (4%)
Query: 184 GLLVEAAQVFDEMPHR----STVTWNVFINGLV---KWGE-VELALSVFDRMRDRSVVSW 235
G L A +F+EM + +T+N I G +W + +L + R +VV++
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 236 TLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAE 295
+++ID++ + + +A L ++M++ GI P +T ++ ++ +
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 296 KRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIP--DWRKNLVSWNSLISGFAMNGMA 353
+G + DI N LI+ Y K I+ F+E+ N V++N+L+ GF +G
Sbjct: 396 SKGCDP-DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGC 413
A + F+ M +RP+ V++ +L G +E+ L+ F K + ++ DI Y
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMI 513
Query: 414 VVDMLGRAGRLEEAEKVALQVP 435
++ + A ++++A + +P
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLP 535
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 148/335 (44%), Gaps = 56/335 (16%)
Query: 188 EAAQVFDEM----PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVI 239
+A +F +M P + + +N + + K + EL L++ +M + S+ + +++I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
+ + R + A + K++++ G EP V IF + N LC
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKL-GYEPDTV----IFNTLLN----GLC------------ 169
Query: 300 NVIDIRITNAL--IDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAV 357
++ R++ AL +D + G + L++ N+L++G +NG +AV
Sbjct: 170 --LECRVSEALELVDRMVEMG--------------HKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 358 ENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDM 417
+ M + G +PN V + VL+ G ++ KM + I D Y ++D
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDG 272
Query: 418 LGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHG 475
L + G L+ A + +++ A+ + + TL+G + G ++ + I++
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM--IKRKIS 330
Query: 476 GDYVLMS---NIFVGVGRYKDAER-LREVIDERIA 506
+ V S + FV G+ ++A++ L+E++ IA
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGLVKWGE 216
VFK F F V +L++Y+ GL+ A VFD M + + + N ++ LV+ GE
Sbjct: 147 VFK-EFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGE 205
Query: 217 VELALSVFDRM----RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+AL V+D+M V + ++V++AY R KA+ ++ G+E VT
Sbjct: 206 NFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD 332
++ A +G ++ V +RG + ++ +LI Y K G +E A F+ + +
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSR-NVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 333 WRKNLVS----WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
K LV+ + L+ G+ G R+AV +NM + G+R N S+++ G +
Sbjct: 325 --KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
E + F++M ND + PD Y +VD RAG ++EA K+ Q+
Sbjct: 383 VEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 12/258 (4%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D + L + R +++H + ++G + + + L+ Y G LVEA Q+F
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 194 DEMPHRSTV----TWNVFINGLVKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRM 245
M S T+N ++G + G V+ AL + D+M + VV ++ +++ Y+R+
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
L+L++ M++ G+ E++ T+ A+ LG + RG + D
Sbjct: 450 GAFHDVLSLWKMMLK-RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL-LTDTI 507
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENM 363
N +I K + A + +R + ++ +L G+ G +EA E M
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 364 EKAGLRPNHVAFLSVLSA 381
E+ G+ P + +++S
Sbjct: 568 ERKGIFPTIEMYNTLISG 585
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 21/282 (7%)
Query: 160 LVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTVT----WNVFINGLVKWG 215
L+ + G +V T L++ Y GL+ EA VF+ + + V + V ++G + G
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345
Query: 216 EVELALSVFDRMRDRSVVSWTLV----IDAYTRMNQPMKALALFRKMVEVDGIEPTEVTL 271
++ A+ V D M + V + T + I+ Y + Q ++A +F +M + ++P T
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW-SLKPDHHTY 404
Query: 272 LTIFPAIANLGYI----KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
T+ GY+ KLC + +K V + N L+ Y++ G +
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQM---CQKEV--VPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 328 QEIPDWRKNL--VSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+ + N +S ++L+ G EA++ +EN+ GL + + ++S
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
V E + + VN + P ++ Y + + G L+EA
Sbjct: 520 EKVNEAKEILDN-VNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVF 224
H+Y T ++ + GLL + +VFDEMP RS ++ IN + G E +L +
Sbjct: 142 HIY--TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 225 DRMRDR----SVVSWTLVIDAYTRMNQPMKA-LALFRKMVEVDGIEPTEVTLLTIFPAIA 279
DRM++ S++++ VI+A R + L LF +M +GI+P VT T+ A A
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH-EGIQPDIVTYNTLLSACA 258
Query: 280 NLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQE------IPDW 333
G + V G V D+ + L++ + K +E E +PD
Sbjct: 259 IRGLGDEAEMVFRTMNDGGI-VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD- 316
Query: 334 RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
+ S+N L+ +A +G +EA+ F M+ AG PN + +L+ G ++ +
Sbjct: 317 ---ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
F +M PD Y ++++ G G +E
Sbjct: 374 LFLEM-KSSNTDPDAATYNILIEVFGEGGYFKE 405
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 8/273 (2%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
S+ + LV + ++L LF+ M +P E + + G + C V
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV 163
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR--KNLVSWNSLISGFA 348
+G + T ALI+ Y + G E++ + + + +++++N++I+ A
Sbjct: 164 FDEMPSQGVSRSVFSYT-ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 349 MNGMAREAVEN-FENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPD 407
G+ E + F M G++P+ V + ++LSAC+ GL +E F M ND IVPD
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPD 281
Query: 408 IRHYGCVVDMLGRAGRLEEAEKVALQVPH--EVANDVIWRTLLGACSVHNNVEIGQRVTE 465
+ Y +V+ G+ RLE+ + ++ + + + LL A + +++ V
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 466 KILEIE-KGHGGDYVLMSNIFVGVGRYKDAERL 497
++ + Y ++ N+F GRY D +L
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 141/339 (41%), Gaps = 49/339 (14%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGLVKWGEVELALSVFDRMR--- 228
LL+ Y+ G + EA VF +M T++V +N + G + +F M+
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 229 -DRSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGY---- 283
D ++ ++I+ + + + LF MVE + IEP T I A G
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE-ENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 284 ------------IKLCQSVHGYAEKRG-----------FNVI-------DIRITNALIDL 313
+ ++ G E G FN + I ++L+
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 314 YAKCGCIESASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPN 371
+A+ G ++ + + D +N ++N+ I + G EAV+ + +MEK+ P+
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 372 HVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA 431
+VLS S LV+E + F +M I+P I Y ++ + G+ R ++ ++
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Query: 432 LQ-VPHEVAN--DVIWRTLLGACSVHNNVEIGQRVTEKI 467
+ + + V+N VI + + G +N +I + V +K+
Sbjct: 621 EEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKL 659
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 170/360 (47%), Gaps = 22/360 (6%)
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNV 206
T F + V K+G++ L++ + G + EA + D M VT+N
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 207 FINGLVKWGEVELALSVFDRMRDRS----VVSWTLVIDAYTRMNQPMKALALFRKMVEVD 262
+NG+ + G+ LAL + +M +R+ V +++ +ID+ R A++LF++M E
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETK 257
Query: 263 GIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRIT-NALIDLYAKCGCIE 321
GI+ + VT ++ + G K + ++ IT N L+D++ K G ++
Sbjct: 258 GIKSSVVTYNSLVRGLCKAG--KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 322 SASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVL 379
A+ ++E+ N++++N+L+ G+ M EA + M + P+ V F S++
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 380 SACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQ-VPHEV 438
V++G+K F + ++ +V + Y +V ++G+++ AE++ + V H V
Sbjct: 376 KGYCMVKRVDDGMKVF-RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 439 ANDVI-WRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIFVGV---GRYKDA 494
DV+ + LL + +E + E + + + G V+ + I G+ G+ +DA
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG--IVMYTTIIEGMCKGGKVEDA 492
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 147/334 (44%), Gaps = 25/334 (7%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D FT++ + + C I L + G + V L++ G + A +
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 194 DEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRM 245
+M R + +T+NV ++ VK G+++ A ++ M R +++++ ++D Y
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
N+ +A + MV + P VT ++ + + V KRG V +
Sbjct: 347 NRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL-VANAV 404
Query: 306 ITNALIDLYAKCGCIESASRFFQE------IPDWRKNLVSWNSLISGFAMNGMAREAVEN 359
+ L+ + + G I+ A FQE +PD ++++ L+ G NG +A+E
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD----VMTYGILLDGLCDNGKLEKALEI 460
Query: 360 FENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ-IVPDIRHYGCVVDML 418
FE+++K+ + V + +++ GG VE+ F + C+ + P++ Y ++ L
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL--PCKGVKPNVMTYTVMISGL 518
Query: 419 GRAGRLEEAEKVALQVPHE--VANDVIWRTLLGA 450
+ G L EA + ++ + ND + TL+ A
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 13/273 (4%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST----VTWNVFINGL 211
+L+ + G ++ L+ Y + L EA + D M VT+ I G
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 212 VKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
V+ + VF + R +V ++++++ + + + A LF++MV G+ P
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVLPD 437
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+T + + + G ++ + +K + + I + +I+ K G +E A F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD-LGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 328 QEIP--DWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+P + N++++ +ISG G EA ME+ G PN + +++ A
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
G + K +M C D V+DML
Sbjct: 557 GDLTASAKLIEEM-KSCGFSADASSIKMVIDML 588
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 20/279 (7%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + L +S + L + ++G++ + T L+ + EA +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 194 DEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRM 245
D+M R VT+ +NGL K G+++LALS+ +M + VV + +ID +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
AL LF +M + GI P T ++ + N G + +R N ++
Sbjct: 272 KHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP-NVV 329
Query: 306 ITNALIDLYAKCGCIESASRFFQEI------PDWRKNLVSWNSLISGFAMNGMAREAVEN 359
+ALID + K G + A + + E+ PD + +++SLI+GF M+ EA
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD----IFTYSSLINGFCMHDRLDEAKHM 385
Query: 360 FENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
FE M PN V + +++ VEEG++ F +M
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 14/282 (4%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGL 211
+L+ + K ++ + L+ + + L EA +F+ M + + VT++ I G
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 212 VKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
K VE + +F M R +V ++T +I + + A +F++MV V G+ P
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPN 467
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+T + + G + V Y ++ DI N +I+ K G +E F
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 328 --QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+ N++++N++ISGF G EA + M++ G PN + +++ A
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
G E + +M C D G V +ML GRL+++
Sbjct: 587 GDREASAELIKEM-RSCGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 152/349 (43%), Gaps = 46/349 (13%)
Query: 203 TWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALFRKM 258
T+++FIN + ++ LAL+V +M + +V+ + +++ Y + A+AL +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 259 VE-----------------------------VD-----GIEPTEVTLLTIFPAIANLGYI 284
VE VD G +P VT T+ + G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 285 KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPD--WRKNLVSWNS 342
L S+ EK G D+ I N +ID K ++ A F E+ + R ++ +++S
Sbjct: 240 DLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
LIS G +A +M + + PN V F +++ A G + E K +++M+
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR- 357
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKV-ALQVPHEV-ANDVIWRTLLGACSVHNNVEIG 460
I PDI Y +++ RL+EA+ + L + + N V + TL+ VE G
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 461 QRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDERIAIKI 509
+ ++ ++G G+ V + + G + +D + + V + +++ +
Sbjct: 418 MELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 144/335 (42%), Gaps = 58/335 (17%)
Query: 128 FTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLV 187
FTYSSL +S C Y + L ++ + +V + L+ + G LV
Sbjct: 294 FTYSSL-------ISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLV 345
Query: 188 EAAQVFDEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVI 239
EA +++DEM RS T++ ING ++ A +F+ M + +VV+++ +I
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
+ + + + + LFR+M + G+ VT T+ +HG+ + R
Sbjct: 406 KGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYTTL---------------IHGFFQARD- 448
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEIPDW--RKNLVSWNSLISGFAMNGMAREAV 357
++A F+++ N++++N L+ G NG +A+
Sbjct: 449 --------------------CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 358 ENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDM 417
FE ++++ + P+ + ++ G VE+G + F + + P++ Y ++
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISG 547
Query: 418 LGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGA 450
R G EEA+ + ++ + + N + TL+ A
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 164/381 (43%), Gaps = 61/381 (16%)
Query: 106 LSPFPHQAIHFSIHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFK-- 163
L F +H++ H+ + +++ L AY+N +RF + A FK
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADML--VLAYANNSRFELGFEA--FKRS 179
Query: 164 --VGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEV 217
G++ L+ + V+ EM R + T+NV IN L K G++
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM 239
Query: 218 ELALSVFDRMR----DRSVVSWTLVIDAYTRM--NQPM-KALALFRKMVEVDGIEPTEVT 270
A V + M+ +VVS+ +ID Y ++ N M KA A+ ++MVE D + P
Sbjct: 240 NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND-VSPN--- 295
Query: 271 LLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI 330
LT F N LID + K + + + F+E+
Sbjct: 296 -LTTF--------------------------------NILIDGFWKDDNLPGSMKVFKEM 322
Query: 331 --PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLV 388
D + N++S+NSLI+G G EA+ + M AG++PN + + ++++ ++
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 389 EEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE-VANDV-IWRT 446
+E L F V VP R Y ++D + G++++ + ++ E + DV +
Sbjct: 383 KEALDMFGS-VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 447 LLGACSVHNNVEIGQRVTEKI 467
L+ + N+E +++ +++
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQL 462
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 189 AAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVID 240
+ +VF EM + + +++N INGL G++ A+S+ D+M V +++ +I+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 241 AYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFN 300
+ + + +AL +F V+ G PT + A LG I ++ E+ G
Sbjct: 375 GFCKNDMLKEALDMFGS-VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI- 432
Query: 301 VIDIRITNALIDLYAKCGCIESASRFFQEI-----PDWRKNLVSWNSLISGFAMNGMARE 355
V D+ N LI + G IE+A + F ++ PD LV+++ L+ G+ G +R+
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPD----LVTFHILMEGYCRKGESRK 488
Query: 356 AVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVV 415
A + M K GL+P H+ + V+ G ++ +M + ++ ++ Y ++
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 416 DMLGRAGRLEEA 427
+ G+LE+A
Sbjct: 549 QGYSQKGKLEDA 560
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T+ L AC S R +++ + G + +L Y G +A F+ M
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 197 P----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR------SVVSWTLVIDAYTRMN 246
T T+N+ I L K G+ AL +F+ MR++ VV++T ++ Y+
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 247 QPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRI 306
+ A+F MV +G++P V+ + A A G SV G ++ G + D+
Sbjct: 203 EIENCRAVFEAMV-AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI-IPDVVS 260
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRK--NLVSWNSLISGFAMNGMAREAVENFENME 364
L++ Y + A F + R+ N+V++N+LI + NG EAVE F ME
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 365 KAGLRPNHVAFLSVLSACSH 384
+ G++PN V+ ++L+ACS
Sbjct: 321 QDGIKPNVVSVCTLLAACSR 340
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 15/258 (5%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELA 220
G + ++ L+ Y++ G+ A V ++ V++ +N + + A
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 221 LSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
VF MR +VV++ +IDAY +A+ +FR+M E DGI+P V++ T+
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLA 336
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWR 334
A + +V A+ RG N ++ N+ I Y +E A +Q + +
Sbjct: 337 ACSRSKKKVNVDTVLSAAQSRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 335 KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKF 394
+ V++ LISG EA+ + ME + + SVL A S G V E
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 395 FNKM-VNDCQIVPDIRHY 411
FN+M + C+ PD+ Y
Sbjct: 456 FNQMKMAGCE--PDVIAY 471
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 48/274 (17%)
Query: 189 AAQVFDEM------PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLV 238
A + D+M P RST +N IN G AL V +M D V V+ +V
Sbjct: 65 AMNLMDDMLRAAIAPSRST--YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 239 IDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRG 298
+ AY Q KAL+ F ++++ + P T I ++ LG QS
Sbjct: 123 LSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLSKLG-----QSSQA------ 170
Query: 299 FNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVE 358
+ + N++ + A+C R ++V++ S++ +++ G
Sbjct: 171 -----LDLFNSMREKRAEC----------------RPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 359 NFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDML 418
FE M GL+PN V++ +++ A + G+ L + + I+PD+ Y C+++
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN-GIIPDVVSYTCLLNSY 268
Query: 419 GRAGRLEEAEKVALQVPHE--VANDVIWRTLLGA 450
GR+ + +A++V L + E N V + L+ A
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 302
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 137 TFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEM 196
T+ L AC S R +++ + G + +L Y G +A F+ M
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 197 P----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR------SVVSWTLVIDAYTRMN 246
T T+N+ I L K G+ AL +F+ MR++ VV++T ++ Y+
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 247 QPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRI 306
+ A+F MV +G++P V+ + A A G SV G ++ G + D+
Sbjct: 335 EIENCRAVFEAMV-AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI-IPDVVS 392
Query: 307 TNALIDLYAKCGCIESASRFFQEIPDWRK--NLVSWNSLISGFAMNGMAREAVENFENME 364
L++ Y + A F + R+ N+V++N+LI + NG EAVE F ME
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 365 KAGLRPNHVAFLSVLSACSH 384
+ G++PN V+ ++L+ACS
Sbjct: 453 QDGIKPNVVSVCTLLAACSR 472
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 21/261 (8%)
Query: 165 GFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELA 220
G + ++ L+ Y++ G+ A V ++ V++ +N + + A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 221 LSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP 276
VF MR +VV++ +IDAY +A+ +FR+M E DGI+P V++ T+
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLA 468
Query: 277 AIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN 336
A + +V A+ RG N ++ N+ I Y +E A +Q + RK
Sbjct: 469 ACSRSKKKVNVDTVLSAAQSRGIN-LNTAAYNSAIGSYINAAELEKAIALYQSM---RKK 524
Query: 337 LVSWNS-----LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEG 391
V +S LISG EA+ + ME + + SVL A S G V E
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 392 LKFFNKM-VNDCQIVPDIRHY 411
FN+M + C+ PD+ Y
Sbjct: 585 ESIFNQMKMAGCE--PDVIAY 603
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 46/273 (16%)
Query: 175 GLLQMYSIGGLLVEAAQVFDEM------PHRSTVTWNVFINGLVKWGEVELALSVFDRMR 228
L+ + G A + D+M P RST +N IN G AL V +M
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRST--YNNLINACGSSGNWREALEVCKKMT 240
Query: 229 DRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI 284
D V V+ +V+ AY Q KAL+ F ++++ + P T I ++ LG
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLSKLG-- 297
Query: 285 KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLI 344
QS + + N++ + A+C R ++V++ S++
Sbjct: 298 ---QSSQA-----------LDLFNSMREKRAEC----------------RPDVVTFTSIM 327
Query: 345 SGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI 404
+++ G FE M GL+PN V++ +++ A + G+ L + + I
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN-GI 386
Query: 405 VPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
+PD+ Y C+++ GR+ + +A++V L + E
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 158/338 (46%), Gaps = 17/338 (5%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMRDR- 230
++ Y G LV A + M + + +N I + GE+E A ++M+ +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 231 ---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
SV ++ ++I Y R + K + ++M E +G P V+ T+ + +
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEM-EDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLIS 345
Q V E RG + +RI N LID G IE A RF +E+ NLV++N+LI
Sbjct: 514 QIVKRDMEDRGVSP-KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 346 GFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIV 405
G +M G EA + + + GL+P+ + S++S G V+ + + +M I
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM-KRSGIK 631
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTE 465
P ++ Y ++ + + G +E E++ ++ + + +++ +L +VH ++E + +
Sbjct: 632 PTLKTYHLLISLCTKEG-IELTERLFGEMSLK-PDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 466 KILEIEKGHGGDYVLMSNIFVGVGRYKDAERLREVIDE 503
++ IEK G D +++ +G + +R +IDE
Sbjct: 690 QM--IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 156/391 (39%), Gaps = 88/391 (22%)
Query: 191 QVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAY 242
++F+ M H S +NV I+GL K + A +FD M R S++++ +ID Y
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 243 TRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVI 302
+ P K+ + R+ ++ D IEP+ +T T+ + G ++ ++V + GF V
Sbjct: 260 CKAGNPEKSFKV-RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF-VP 317
Query: 303 DIRITNALIDLYA-----------------------------------KCGCIESASRFF 327
D + L D Y+ K G IE A
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 328 --QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+ N V +N++I G+ G A E MEK G++P+H+A+ ++
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 386 GLVEEGLKFFNKM----------------------------------VNDCQIVPDIRHY 411
G +E K NKM + D +P++ Y
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 412 GCVVDMLGRAGRLEEAEKVALQVPHE-VANDV-IWRTLLGACSVHNNVEIGQRVTEKILE 469
G +++ L + +L EA+ V + V+ V I+ L+ C +E R ++++L
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML- 556
Query: 470 IEKGHGGDYVLMSNIFVGV---GRYKDAERL 497
+KG + V + + G+ G+ +AE L
Sbjct: 557 -KKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 71/389 (18%)
Query: 118 IHTLNHSSTFFTYSSLDTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLL 177
+ TL S +TYS F++ C S + + + A + K+G++ + + LL
Sbjct: 109 MQTLGISHDLYTYS-------IFINCFCRRSQLS-LALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 178 -----------------QMYSIG-------------GLLV-----EAAQVFDEMPHRST- 201
QM +G GL + EA + D+M R
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 202 ---VTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALAL 254
VT+ +NGL K G+++LAL++ ++M +VV + +ID+ + A+ L
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 255 FRKMVEVDGIEPTEVTLLTIFPAIANLG-YIKLCQSVHGYAEKR-GFNVIDIRITNALID 312
F +M E GI P VT ++ + N G + + + EK+ NV+ NALID
Sbjct: 281 FTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF---NALID 336
Query: 313 LYAKCGCIESASRFFQEI------PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKA 366
+ K G + A + +E+ PD +++N LI+GF M+ EA + F+ M
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPD----TITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 367 GLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEE 426
PN + ++++ VE+G++ F +M +V + Y ++ +AG +
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 427 AEKVALQ-VPHEVANDVIWRTLL--GACS 452
A+ V Q V + V D++ ++L G CS
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 153/368 (41%), Gaps = 55/368 (14%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
D T + L +S + L + ++G++ + T L+ + EA +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 194 DEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRM 245
D+M R VT+ +NGL K G+++LAL++ ++M +VV + +ID+ +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG-YIKLCQSVHGYAEKR-GFNVID 303
A+ LF +M E GI P VT ++ + N G + + + EK+ NV+
Sbjct: 272 RHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 304 IRITNALIDLYAKCGCIESASRFFQEI--------------------------------- 330
NALID + K G + A + +E+
Sbjct: 331 F---NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 331 ----PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
D N+ ++N+LI+GF + VE F M + GL N V + +++ G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIW 444
+ F +MV++ ++ DI Y ++ L G+L+ A + LQ N I+
Sbjct: 448 DCDSAQMVFKQMVSN-RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 445 RTLL-GAC 451
T++ G C
Sbjct: 507 NTMIEGMC 514
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 154/363 (42%), Gaps = 58/363 (15%)
Query: 203 TWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVIDAYTRMNQPMKALALFRKM 258
T+++FIN + ++ LAL+V +M + +V+ + +++ Y + A+AL +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 259 VE-----------------------------VD-----GIEPTEVTLLTIFPAIANLGYI 284
VE VD G +P VT T+ + G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 285 KLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNS 342
L ++ E ++ I N +ID K +E A F E+ R N+V++NS
Sbjct: 240 DLALNLLNKMEAARIKA-NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDC 402
LI+ G +A NM + + PN V F +++ A G + E K +M+
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR- 357
Query: 403 QIVPDIRHYGCVVDMLGRAGRLEEAEKV-ALQVPHE-VANDVIWRTLL-GACS---VHNN 456
I PD Y +++ RL+EA+++ V + + N + TL+ G C V +
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 457 VEIGQRVTEKILEIEKGHGGDYVLMSNIFVGVGRYKDAER----LREVIDERIAIKIPGY 512
VE+ + ++ ++G G+ V + I G + D + ++++ R+ I Y
Sbjct: 418 VELFREMS------QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 513 SLL 515
S+L
Sbjct: 472 SIL 474
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGLVKWGEVELALSVFDRMRDRS 231
L+ + + L EA Q+F M + + T+N ING K VE + +F M R
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 232 VV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFP-AIANLGYIKL 286
+V ++T +I + + A +F++MV PT++ +I + + G +
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS--NRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISG 346
+ Y +K ++I I N +I+ K G + A F + + ++V++N++ISG
Sbjct: 487 ALVIFKYLQKSEME-LNIFIYNTMIEGMCKAGKVGEAWDLFCSLS-IKPDVVTYNTMISG 544
Query: 347 FAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA 381
+ +EA + F M++ G PN + +++ A
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRS----TVTWNVFINGLVKWGEVELALSVF 224
+V L+ + G LVEA ++ +EM RS T+T+N+ ING ++ A +F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 225 DRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIAN 280
M + ++ ++ +I+ + + + + LFR+M + G+ VT TI
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ-RGLVGNTVTYTTIIQGFFQ 445
Query: 281 LGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC--GCIESASRFFQ--EIPDWRKN 336
G C S ++ N + I I L+ C G +++A F+ + + N
Sbjct: 446 AGD---CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 337 LVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFN 396
+ +N++I G G EA + F ++ ++P+ V + +++S L++E F
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 397 KMVND 401
KM D
Sbjct: 560 KMKED 564
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 16/337 (4%)
Query: 163 KVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVE 218
K F V L++ + G++ E V+ +M + T+N +NGLV V+
Sbjct: 180 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD 239
Query: 219 LALSVFDRMRD----RSVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
A VF+ M +V++ +I Y + Q KA+ R M E G E ++T +T+
Sbjct: 240 SAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTM 298
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
A C +++ +++G V + + L + E + F I
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 335 K-NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLK 393
K N+ + LI G+A +G +A+ M G +P+ V + V++ G VEE L
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 394 FFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGAC 451
+F+ D + + Y ++D LG+AGR++EAE++ ++ + + + L+ A
Sbjct: 419 YFHTCRFDGLAINSM-FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 452 SVHNNVEIGQRVTEKILEIEKGHGGDY---VLMSNIF 485
+ H V+ + +++ E E Y +L+S +F
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 22/313 (7%)
Query: 197 PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKAL 252
PH +++ I GL K G++ +VF+ M + +V +T++ID Y + A+
Sbjct: 327 PH----AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 253 ALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALID 312
L +M++ +G +P VT + + G ++ G I+ ++LID
Sbjct: 383 RLLHRMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL-AINSMFYSSLID 440
Query: 313 LYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENM-EKAGLR 369
K G ++ A R F+E+ + ++ +N+LI F + EA+ F+ M E+ G
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 500
Query: 370 PNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEK 429
+ +LS EE LK ++ M+ D I P + + L +G++ A K
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMI-DKGITPTAACFRALSTGLCLSGKVARACK 559
Query: 430 V-----ALQVPHEVANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNI 484
+ + V + A + + TL A + ++ +TE+ E+ G +M N
Sbjct: 560 ILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVP---GRIRTVMINA 616
Query: 485 FVGVGRYKDAERL 497
VG+ A +L
Sbjct: 617 LRKVGKADLAMKL 629
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 21/281 (7%)
Query: 161 VFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPH----RSTVTWNVFINGLVKWGE 216
+ K+GF+ + LL + G EA + D M + V +N INGL K +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 217 VELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLL 272
+ AL VF M + + V++ +I + + A L R MV+ I+P +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK-RKIDPNVIFFT 258
Query: 273 TIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI-- 330
+ G + ++++ +R V ++ N+LI+ + GC+ A F +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 331 ----PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGG 386
PD +V++N+LI+GF + + ++ F M GL + + +++ G
Sbjct: 318 KGCFPD----VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 387 LVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ K FN+MV DC + PDI Y ++D L G++E+A
Sbjct: 374 KLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 10/263 (3%)
Query: 200 STVTWNVFINGLVKWGEVELALSVFDRMRD----RSVVSWTLVIDAYTRMNQPMKALALF 255
S VT +NG + + A+S+ D M +VV + VI+ + AL +F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 256 RKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYA 315
M E GI VT T+ ++N G + KR + I T ALID +
Sbjct: 208 YCM-EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT-ALIDTFV 265
Query: 316 KCGCIESASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHV 373
K G + A ++E+ N+ ++NSLI+GF ++G +A F+ M G P+ V
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 374 AFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV-AL 432
+ ++++ VE+G+K F +M +V D Y ++ +AG+L A+KV
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 433 QVPHEVANDVIWRTLLGACSVHN 455
V V+ D++ +L C +N
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNN 407
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVF 224
+V+ L+ + I G L +A +FD M + VT+N I G K VE + +F
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 225 DRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIAN 280
M + +V ++ +I Y + + A +F +MV+ G+ P VT + + N
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILLDCLCN 406
Query: 281 LGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLV 338
G I+ + +K +V DI N +I + ++ A F+ + + + +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Query: 339 SWNSLISGFAMNGMAREAVENFENMEKAGLRPNH 372
++ ++ISG G+ REA + M++ G P+
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
S+V +T V+ +MN+ + L+ KM E GI + + + L ++
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR--KNLVSWNSLISGFA 348
G K GF I +L++ + + + A + + N+V +N++I+G
Sbjct: 137 LGKMMKLGFRP-SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
N A+E F MEK G+R + V + +++S S+ G + + MV +I P++
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNV 254
Query: 409 RHYGCVVDMLGRAGRLEEAEKVALQVPHE--VANDVIWRTLLGACSVHNNVEIGQRVTEK 466
+ ++D + G L EA + ++ V N + +L+ +H + + + +
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD- 313
Query: 467 ILEIEKGHGGDYVLMSNIFVGVGRYKDAE 495
L + KG D V + + G + K E
Sbjct: 314 -LMVSKGCFPDVVTYNTLITGFCKSKRVE 341
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 188 EAAQVFDEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVI 239
EA + D M R VT+ +NGL K G+ +LAL++ ++M + +VV ++ VI
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
D+ + AL LF +M E G+ P +T ++ + N G + +R
Sbjct: 261 DSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAV 357
N ++ +ALID + K G + A + ++E+ N+ +++SLI+GF M EA
Sbjct: 320 NP-NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 358 ENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM 398
+ E M + PN V + ++++ V++G++ F +M
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 23/251 (9%)
Query: 188 EAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVI 239
+A +F EM ++ + +T++ I+ L +G A + M +R + V+++ +I
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEP---TEVTLLTIFPAIANLGYIKLCQSVHGYAEK 296
DA+ + + +KA L+ +M++ I+P T +L+ F + LG K Q + K
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIK-RSIDPNIFTYSSLINGFCMLDRLGEAK--QMLELMIRK 387
Query: 297 RGF-NVIDIRITNALIDLYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMA 353
NV+ N LI+ + K ++ F+E+ N V++ +LI GF
Sbjct: 388 DCLPNVV---TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSA-CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYG 412
A F+ M G+ PN + + +L C +G L + + F + + + PDI Y
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYN 502
Query: 413 CVVDMLGRAGR 423
+++ + +AG+
Sbjct: 503 IMIEGMCKAGK 513
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 40/233 (17%)
Query: 202 VTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRK 257
VT N +NG + A+++ D+M + V++T +I N+ +A+AL +
Sbjct: 149 VTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDR 208
Query: 258 MVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKC 317
MV+ G +P VT + A+ N LC KRG + + + N +
Sbjct: 209 MVQ-RGCQPDLVT----YGAVVN----GLC--------KRGDTDLALNLLNKM------- 244
Query: 318 GCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLS 377
E N+V ++++I +A+ F ME G+RPN + + S
Sbjct: 245 -----------EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 378 VLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
++S + G + + + M+ +I P++ + ++D + G+L +AEK+
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALIDAFVKKGKLVKAEKL 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 251 ALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNAL 310
A+ LF M + P+ + + AIA + L S E G + ++ N L
Sbjct: 62 AIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISH-NLYTYNIL 119
Query: 311 IDLYAKCGCIESASRFFQEIPD--WRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGL 368
I+ + +C + A ++ + ++V+ NSL++GF +AV + M + G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 369 RPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+P+ V F +++ E + ++MV CQ PD+ YG VV+ L + G + A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ--PDLVTYGAVVNGLCKRGDTDLA 237
Query: 428 EKV--ALQVPHEVANDVIWRTLLGA-CSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNI 484
+ ++ AN VI+ T++ + C + + TE + + + Y + +
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 485 FVGVGRYKDAER-LREVIDERIAIKIPGYSLL 515
GR+ DA R L ++I+ +I + +S L
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 48/266 (18%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVF-DRMRDR 230
LL Y G + E +++ EM +T+T N+ I+GLVK G V+ AL ++ D M DR
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 231 ----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
+ ++ +ID ++ + +A LF M++ G P
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY-GCRP-------------------- 924
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLI 344
+ I N LI+ + K G ++A F+ + R +L +++ L+
Sbjct: 925 ----------------NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 345 SGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI 404
M G E + F+ ++++GL P+ V + +++ +EE L FN+M I
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 405 VPDIRHYGCVVDMLGRAGRLEEAEKV 430
PD+ Y ++ LG AG +EEA K+
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKI 1054
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 10/232 (4%)
Query: 203 TWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKM 258
T+N+ I GL++ +E+A VF +++ V ++ ++DAY + + + L+++M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 259 VEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV-HGYAEKRGFNVIDIRITNALIDLYAKC 317
E +T + + G + + + R F+ LID +K
Sbjct: 847 -STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY-GPLIDGLSKS 904
Query: 318 GCIESASRFFQEIPDW--RKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAF 375
G + A + F+ + D+ R N +N LI+GF G A A F+ M K G+RP+ +
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 376 LSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
++ G V+EGL +F K + + + PD+ Y +++ LG++ RLEEA
Sbjct: 965 SVLVDCLCMVGRVDEGLHYF-KELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 126/263 (47%), Gaps = 17/263 (6%)
Query: 175 GLLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDR 230
GLL+++ L +A ++F M + T+ VFI+ K G+ AL F++M+ +
Sbjct: 407 GLLRVHR----LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 231 ----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKL 286
++V+ + + + + +A +F + ++ G+ P VT + + +G I
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 287 CQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR--KNLVSWNSLI 344
+ + G D+ + N+LI+ K ++ A + F + + + +V++N+L+
Sbjct: 522 AIKLLSEMMENGCEP-DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 345 SGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQI 404
+G NG +EA+E FE M + G PN + F ++ V LK KM+ D
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM-DMGC 639
Query: 405 VPDIRHYGCVVDMLGRAGRLEEA 427
VPD+ Y ++ L + G+++EA
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEA 662
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 17/319 (5%)
Query: 162 FKVGFQFHVYVQTGLLQ---MYSIGGLLVEAAQVFDEMPHRSTVTWNVFINGLVKWGEVE 218
F+ Q + + GL + + S+ GLL E + P+ T+ + I L + G++
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPN--VYTFTICIRVLGRAGKIN 275
Query: 219 LALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTI 274
A + RM D VV++T++IDA + A +F KM + +P VT +T+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITL 334
Query: 275 FPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWR 334
++ + + EK G +V D+ L+D K G A + D
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDG-HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 335 --KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGL 392
NL ++N+LI G +A+E F NME G++P ++ + G L
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 393 KFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVANDVIWRTLLGA 450
+ F KM I P+I + L +AGR EA+++ L+ V + V + ++
Sbjct: 454 ETFEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 451 CSVHNNVEIGQRVTEKILE 469
S ++ ++ +++E
Sbjct: 513 YSKVGEIDEAIKLLSEMME 531
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 176 LLQMYSIGGLLVEAAQVFDEM----PHRSTVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
L+ S G L EA Q+F+ M + +N+ ING K GE + A ++F RM
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 232 V----VSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYI-KL 286
V ++++++D + + + L F+++ E G+ P V I I LG +L
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE-SGLNPDVVCYNLI---INGLGKSHRL 1012
Query: 287 CQSVHGYAEKRGFNVI--DIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNS 342
+++ + E + I D+ N+LI G +E A + + EI N+ ++N+
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 343 LISGFAMNGMAREAVENFENMEKAGLRPN 371
LI G++++G A ++ M G PN
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 44/239 (18%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR- 230
+++ YS G + EA ++ EM + N IN L K V+ A +F RM++
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 231 ---SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
+VV++ ++ + + +A+ LF MV+ G P +T T+F + + L
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ-KGCPPNTITFNTLFDCLCKNDEVTL- 626
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
A K F ++D+ GC+ PD + ++N++I G
Sbjct: 627 ------ALKMLFKMMDM-------------GCV----------PD----VFTYNTIIFGL 653
Query: 348 AMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVP 406
NG +EA+ F M+K + P+ V ++L L+E+ K + +C P
Sbjct: 654 VKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 102/269 (37%), Gaps = 46/269 (17%)
Query: 176 LLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDRS 231
LL G + EA ++F+ M + +T+T+N + L K EV LAL + +M D
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 232 VV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLC 287
V ++ +I + Q +A+ F +M ++ + P VTL T+ P + I+
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDA 696
Query: 288 QSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGF 347
+ ITN L + C + + F W LI
Sbjct: 697 YKI---------------ITNFLYN------CADQPANLF------------WEDLIGSI 723
Query: 348 AMNGMAREAVENFENMEKAGL-RPNHVAFLSVLS-ACSHGGLVEEGLKFFNKMVNDCQIV 405
AV E + G+ R + ++ +C H V F K D +
Sbjct: 724 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNN-VSGARTLFEKFTKDLGVQ 782
Query: 406 PDIRHYGCVVDMLGRAGRLEEAEKVALQV 434
P + Y ++ L A +E A+ V LQV
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 5/199 (2%)
Query: 231 SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSV 290
+ V++ +I +Y R N +A+ +F +M E G EP VT T+ A G++ + +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEA-GCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 291 HGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFA 348
+ ++ G + D + +I+ K G + +A R F E+ NLV++N +I+ A
Sbjct: 452 YQRMQEAGLSP-DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 349 MNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDI 408
A++ + +M+ AG +P+ V + V+ H G +EE F +M VPD
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK-NWVPDE 569
Query: 409 RHYGCVVDMLGRAGRLEEA 427
YG +VD+ G+AG +++A
Sbjct: 570 PVYGLLVDLWGKAGNVDKA 588
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 134 DTFTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVF 193
+T T+ L + +N + + + + + G + L+ +++ G L A ++
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 194 DEMPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRM 245
M T T++V IN L K G + A +F M + ++V++ ++I + +
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 246 NQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIR 305
AL L+R M G +P +VT + + + G+++ + V +++ + V D
Sbjct: 513 RNYETALKLYRDMQNA-GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW-VPDEP 570
Query: 306 ITNALIDLYAKCGCIESASRFFQEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENM 363
+ L+DL+ K G ++ A +++Q + R N+ + NSL+S F EA ++M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 364 EKAGLRPNHVAFLSVLSACS 383
GL P+ + +LS C+
Sbjct: 631 LALGLHPSLQTYTLLLSCCT 650
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 308 NALIDLYAKCGCIESASRFFQEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
N L+D + GC + N V++N LI + +EA+ F M++AG
Sbjct: 379 NKLLDEMVRDGC--------------KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAG 424
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
P+ V + +++ + G ++ + + +M + + PD Y +++ LG+AG L A
Sbjct: 425 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 428 EKV 430
++
Sbjct: 484 HRL 486
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 152/365 (41%), Gaps = 57/365 (15%)
Query: 118 IHTLNHSSTFFTYSS-LDTFTFAFLSQACAYSNC------TRFGIQLHALVFKVGFQFHV 170
+ + NH F Y L+T TF C T F + AL+ K GF F+V
Sbjct: 83 VRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNV 142
Query: 171 YVQTGLLQMYSIGGLLVEAAQVFDEMPHRSTV----TWNVFINGLVKWGEVELALSVFDR 226
Y LL+ +A + EM S + ++N I G + E+E AL + +
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 227 MRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLG 282
M+ S+V+W ++IDA+ + + +A+ ++M + G+E
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM-KFMGLEA---------------- 245
Query: 283 YIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDWRKN--LVSW 340
D+ + +LI + CG ++ F E+ + + +++
Sbjct: 246 --------------------DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 341 NSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVN 400
N+LI GF G +EA E FE M + G+RPN + ++ G +E L+ N M+
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 401 DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVA--LQVPHEVANDVIWRTLLGACSVHNNVE 458
+ P+ Y +++ L + G + +A ++ ++ +++ + LLG +++
Sbjct: 346 KDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 459 IGQRV 463
++
Sbjct: 405 EASKL 409
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 151 TRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST----VTWNV 206
T+ +QL L+ + + + ++ GL+ +A ++ + M R T +T+N+
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 207 FINGLVKWGEVELALSVFDRM------RDRSVVSWTLVIDAYTRMNQPMKALALFRKMVE 260
+ GL G+++ A + M D V+S+ +I + N+ +AL ++ +VE
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 261 VDGIEPTEVT---------------LLTIFPAIANLGYIKLCQS----VHGYAEKRGFNV 301
G T + ++ I++ ++ + + G+ + NV
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 302 -----IDIRIT---------NALIDLYAKCGCIESASRFFQEIPDWRKN----LVSWNSL 343
+R++ N L+ K G ++ A R F+E+ R N +VS+N +
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ--RDNNFPDVVSFNIM 570
Query: 344 ISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQ 403
I G G + A M +AGL P+ + +++ G ++E + FF+KMV D
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV-DSG 629
Query: 404 IVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHEVANDVIWRTLLGA------CSVHNNV 457
PD V+ G E +K+ V V D++ L C+ N+
Sbjct: 630 FEPDAHICDSVLKYCISQG---ETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM 686
Query: 458 EIGQRV 463
++ +R+
Sbjct: 687 DLAKRL 692
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 143/348 (41%), Gaps = 63/348 (18%)
Query: 128 FTYSSLDTFTFAFLSQACAY---SNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGG 184
FTYSSL +S C Y S+ +R L + + + +V L+ ++ G
Sbjct: 276 FTYSSL-------ISCLCNYGRWSDASR----LLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 185 LLVEAAQVFDEMPHRS---------------------------------------TVTWN 205
L+EA ++FDEM RS VT+N
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 206 VFINGLVKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEV 261
ING K +V + +F M R +V ++T +I + + + A +F++MV
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS- 443
Query: 262 DGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIE 321
DG+ P +T T+ + G ++ V Y +K DI N + + K G +E
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVE 502
Query: 322 SASRFF--QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVL 379
F + + +++++N++ISGF G+ EA F M++ G P+ + +++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 380 SACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
A G + +M C+ D YG V DML GRL++
Sbjct: 563 RAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDML-HDGRLDKG 608
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 19/310 (6%)
Query: 153 FGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFI 208
F + + + K+G+ + LL + G + EA + D+M TVT+ +
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 209 NGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGI 264
+GL + + A+++ +RM + +V++ VI+ + +P AL L KM E I
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKI 236
Query: 265 EPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESAS 324
E V T+ ++ ++ ++ + +G D+ ++LI G AS
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYGRWSDAS 295
Query: 325 RFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSA- 381
R ++ + + N+V++NSLI FA G EA + F+ M + + PN V + S+++
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 382 CSHGGLVEEGLKFFNKMVN-DCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE--V 438
C H L +E + F MV+ DC +PD+ Y +++ +A ++ + ++ + V
Sbjct: 356 CMHDRL-DEAQQIFTLMVSKDC--LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 439 ANDVIWRTLL 448
N V + TL+
Sbjct: 413 GNTVTYTTLI 422
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 54/288 (18%)
Query: 188 EAAQVFDEMPHRST----VTWNVFINGLVKWGEVELALSVFDRMR----DRSVVSWTLVI 239
EA + D M + VT+ + +NGL K G+++LALS+ +M + VV + +I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 240 DAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF 299
DA AL LF +M + GI P VT ++ + N G + +R
Sbjct: 264 DALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 300 NVIDIRITNALIDLYAKCGCIESASRFFQEI------PDWRKNLVSWNSLISGFAMNGMA 353
N ++ +ALID + K G + A + + E+ PD + +++SLI+GF M+
Sbjct: 323 NP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD----IFTYSSLINGFCMHDRL 377
Query: 354 REAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKM--------------- 398
EA FE M PN V + +++ V+EG++ F +M
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 399 ---------VNDCQIV----------PDIRHYGCVVDMLGRAGRLEEA 427
++ QIV PDI Y ++D L G++E A
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGL 211
+L+ + K ++ + L+ + + L EA +F+ M + + VT+N I G
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 212 VKWGEVELALSVFDRMRDRSVV----SWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
K V+ + +F M R +V ++T +I + + + A +F++MV DG+ P
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPD 465
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+T + + N G ++ V Y ++ DI N +I+ K G +E F
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP-DIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 328 --QEIPDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+ + N+V++ +++SGF G+ EA F M++ G P+ + +++ A
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
G + +M C+ V D G V +ML GRL+++
Sbjct: 585 GDKAASAELIREM-RSCRFVGDASTIGLVTNML-HDGRLDKS 624
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 21/328 (6%)
Query: 136 FTFAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDE 195
+T++ L + + + A + K+G++ + LL + G + +A + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 196 MPHR----STVTWNVFINGLVKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQ 247
M + T+N I+GL + A+++ DRM + +V++ +V++ +
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 248 PMKALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF--NVIDIR 305
AL+L +KM E IEP V TI A+ N + ++ + +G NV+
Sbjct: 237 IDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV--- 292
Query: 306 ITNALIDLYAKCGCIESASRFFQEIPDWR--KNLVSWNSLISGFAMNGMAREAVENFENM 363
N+LI G ASR ++ + + N+V++++LI F G EA + ++ M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 364 EKAGLRPNHVAFLSVLSA-CSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAG 422
K + P+ + S+++ C H L E F + DC P++ Y ++ +A
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAK 410
Query: 423 RLEEAEKVALQVPHE--VANDVIWRTLL 448
R++E ++ ++ V N V + TL+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 168/394 (42%), Gaps = 21/394 (5%)
Query: 138 FAFLSQACAYSNCTRFGIQLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP 197
F+ L A A N I L + +G ++Y + L+ + L A V +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 198 ----HRSTVTWNVFINGLVKWGEVELALSVFDRMRDRSV----VSWTLVIDAYTRMNQPM 249
VT N +NG + A+S+ +M + ++ +I R N+
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 250 KALALFRKMVEVDGIEPTEVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNA 309
+A+AL +MV V G +P VT + + G I L S+ E+ G + I N
Sbjct: 204 EAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-GKIEPGVVIYNT 261
Query: 310 LIDLYAKCGCIESASRFFQEIPDW--RKNLVSWNSLISGFAMNGMAREAVENFENMEKAG 367
+ID + A F E+ + R N+V++NSLI G +A +M +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 368 LRPNHVAFLSVLSACSHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEA 427
+ PN V F +++ A G + E K +++M+ I PDI Y +++ RL+EA
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 428 EKV-ALQVPHEV-ANDVIWRTLLGACSVHNNVEIGQRVTEKILEIEKGHGGDYVLMSNIF 485
+ + L + + N V + TL+ V+ G + ++ ++G G+ V + +
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLI 438
Query: 486 VGVGRYKDAER----LREVIDERIAIKIPGYSLL 515
G + ++ + ++++ + + I YS+L
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 169 HVYVQTGLLQMYSIGGLLVEAAQVFDEMPHRST----VTWNVFINGLVKWGEVELALSVF 224
+V + L+ + G LVEA +++DEM RS T++ ING ++ A +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 225 DRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPTEVTLLTIFPAIAN 280
+ M + +VV++ +I + + + + + LFR+M + G+ VT T+
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVGNTVTYTTL------ 437
Query: 281 LGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFFQEIPDW-RKNLVS 339
+HG+ + R C + F Q + D ++++
Sbjct: 438 ---------IHGFFQARE--------------------CDNAQIVFKQMVSDGVLPDIMT 468
Query: 340 WNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHGGLVEEGLKFFNKMV 399
++ L+ G NG A+ FE ++++ + P+ + ++ G VE+G F +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 400 NDCQIVPDIRHYGCVVDMLGRAGRLEEAEKVALQVPHE 437
+ P++ Y ++ R G EEA+ + ++ E
Sbjct: 529 LK-GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 154/328 (46%), Gaps = 22/328 (6%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMP----HRSTVTWNVFINGL 211
Q + + + G + T L+ Y L A +VF+EMP R+ V + I+GL
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 212 VKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
++ A+ +F +M+D +V ++T++I + + +AL L ++M E GI+P
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET-GIKPN 357
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGF--NVIDIRITNALIDLYAKCGCIESASR 325
T + ++ + + + + G ++G NVI NALI+ Y K G IE A
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI---TYNALINGYCKRGMIEDAVD 414
Query: 326 FFQEIPDWRK---NLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSAC 382
E+ + RK N ++N LI G+ + + + A+ M + + P+ V + S++
Sbjct: 415 VV-ELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 383 SHGGLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV--ALQVPHEVAN 440
G + + + ++ND +VPD Y ++D L ++ R+EEA + +L+ N
Sbjct: 473 CRSGNFDSAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 441 DVIWRTLLGACSVHNNVEIGQRVTEKIL 468
V++ L+ V+ + EK+L
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKML 559
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 14/285 (4%)
Query: 156 QLHALVFKVGFQFHVYVQTGLLQMYSIGGLLVEAAQVFDEMPHR----STVTWNVFINGL 211
+L + + G +V L+ Y G++ +A V + M R +T T+N I G
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 212 VKWGEVELALSVFDRMRDR----SVVSWTLVIDAYTRMNQPMKALALFRKMVEVDGIEPT 267
K V A+ V ++M +R VV++ +ID R A L M + G+ P
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPD 496
Query: 268 EVTLLTIFPAIANLGYIKLCQSVHGYAEKRGFNVIDIRITNALIDLYAKCGCIESASRFF 327
+ T ++ ++ ++ + E++G N ++ + ALID Y K G ++ A
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAGKVDEAHLML 555
Query: 328 QEI--PDWRKNLVSWNSLISGFAMNGMAREAVENFENMEKAGLRPNHVAFLSVLSACSHG 385
+++ + N +++N+LI G +G +EA E M K GL+P ++
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 386 GLVEEGLKFFNKMVNDCQIVPDIRHYGCVVDMLGRAGRLEEAEKV 430
G + F +M++ PD Y + R GRL +AE +
Sbjct: 616 GDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDM 659