Miyakogusa Predicted Gene

Lj3g3v2735000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2735000.1 Non Chatacterized Hit- tr|F6I372|F6I372_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.92,0,seg,NULL,CUFF.44519.1
         (625 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60850.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   763   0.0  

>AT3G60850.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 11 growth stages; Has 42
           Blast hits to 42 proteins in 12 species: Archae - 0;
           Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37;
           Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
           | chr3:22482053-22483999 FORWARD LENGTH=648
          Length = 648

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/566 (68%), Positives = 452/566 (79%), Gaps = 25/566 (4%)

Query: 73  FFISPDPHISTQFYTFNPDSHALMITCLLERRLATPSEIRAATPRPVLKSWRNVWKDRNE 132
            FISPDPHIS+QFYTFN  SH+LM  CL E RLATP+EIR ATPR VLKSWR VWKDRNE
Sbjct: 95  LFISPDPHISSQFYTFNAASHSLMCRCLREGRLATPAEIRIATPRSVLKSWRAVWKDRNE 154

Query: 133 ETAYLTAWKRIQDKLEARVD-QNGNHFLCFKNNTNQFVSHVNQWQDIVMSFHSDTDLKHL 191
           ETAYLTAWKRIQDKL +R+D   GN FLCFKNN+ QFVSH+NQWQDIVM FH+D DLKHL
Sbjct: 155 ETAYLTAWKRIQDKLTSRLDPATGNEFLCFKNNSQQFVSHINQWQDIVMGFHADGDLKHL 214

Query: 192 GLRETVERIKQVWTVGAKFYGIPESYIRXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRFE 251
           G +ET++RIKQVWTVGAK YGIPES+IR                          KRRRFE
Sbjct: 215 GQKETIDRIKQVWTVGAKLYGIPESFIRVCVAACPVCNADSGSASRN-------KRRRFE 267

Query: 252 YTESFDVPAKEVPCRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKDYACHRAGQPAA-KKS 310
           YTES DVPAKEVP RLQQLAAKHKVVLCIRQKYIRYKPFMAEVKDYACHRAG+P + KKS
Sbjct: 268 YTESLDVPAKEVPDRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKDYACHRAGEPVSIKKS 327

Query: 311 KVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQEEGMAVFKLYAVHSGHEPGPLD 370
           ++LKREPY SKRCGCGFRIRAIVPIANY+EK K+FVYQEEG AVFKLYAVHSGHEPG +D
Sbjct: 328 RILKREPYQSKRCGCGFRIRAIVPIANYSEKTKTFVYQEEGTAVFKLYAVHSGHEPGAMD 387

Query: 371 GNARIMHRVVGHKGSYMTDQENVVYGV-SEEMDNEGFGLMGKDE-GDLQFSILQQVQELK 428
           GNARIMHRVVGHKG ++ DQE  VYGV  E+++ EG GL GKDE  ++QF++L QVQEL+
Sbjct: 388 GNARIMHRVVGHKG-FLMDQE-TVYGVRDEDVETEGMGLTGKDERAEMQFTVLHQVQELR 445

Query: 429 AEVGMLEGKLSKIPQEFMGSVSRELFDIVNKIRNIG-EVGSKPIELLTDK--SDDVLVGD 485
           +E+G LEGK+    QE +GSVS ELF+++NKIRNIG E       L+ +K  SD++LVGD
Sbjct: 446 SELGTLEGKIGNFSQEMLGSVSTELFEMLNKIRNIGVESAQDTTGLVAEKSHSDEILVGD 505

Query: 486 NDLANWSN-HHDRIYGDGKDTELIEDDEDSFGRTLGEVVSWGDHMT--SECRDQKE-LMS 541
           NDL +WS+ HH+ +YGDGKD ELIEDDEDSF R+L +VV W + +T  S+C +QKE L+S
Sbjct: 506 NDLVHWSDHHHEHLYGDGKDAELIEDDEDSFERSLDDVVPW-EQITPPSDCTNQKEDLLS 564

Query: 542 ETCKPEKWLKCSEFDEKSILDCGEDTKLTKPIRHD-EAIVSDEGLGCIQVDSFYQDNPKW 600
           ETCKPEKWLKC++FDE SIL+  ED+KLTKP+ HD  +I +D GL  IQVDSFYQ+N KW
Sbjct: 565 ETCKPEKWLKCNDFDENSILN-SEDSKLTKPMSHDGGSIETDVGLAGIQVDSFYQENSKW 623

Query: 601 YDSPCALDTGVADCENSGF-RHGEIL 625
           YDSPC LD+   D E++GF RHGEIL
Sbjct: 624 YDSPCGLDSNT-DGEDTGFSRHGEIL 648