Miyakogusa Predicted Gene
- Lj3g3v2722600.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2722600.3 Non Chatacterized Hit- tr|G7ZXM9|G7ZXM9_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,81.54,0,PREDICTED: SIMILAR TO NEUROBEACHIN, PARTIAL,NULL;
BEIGE/BEACH-RELATED,NULL; seg,NULL; WD_REPEATS_2,W,CUFF.44498.3
(542 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45540.1 | Symbols: | WD-40 repeat family protein / beige-re... 652 0.0
AT2G45540.2 | Symbols: | WD-40 repeat family protein / beige-re... 652 0.0
AT1G58230.1 | Symbols: | binding | chr1:21566331-21578865 FORWA... 142 4e-34
AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-be... 122 7e-28
AT4G02660.1 | Symbols: | Beige/BEACH domain ;WD domain, G-beta ... 118 1e-26
>AT2G45540.1 | Symbols: | WD-40 repeat family protein / beige-related
| chr2:18757881-18772229 REVERSE LENGTH=2946
Length = 2946
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/533 (61%), Positives = 402/533 (75%), Gaps = 18/533 (3%)
Query: 2 ALESEYVSAHLHEWIDLIFGYKQRGKEAIAANNVFFHVTYEGTVDIDKILDPVQQRATQD 61
ALESE+VSAHLHEWIDLIFGYKQRGKEAI ANNVFF++TYEGTVDIDKI DPVQQRATQD
Sbjct: 2430 ALESEHVSAHLHEWIDLIFGYKQRGKEAIMANNVFFYITYEGTVDIDKITDPVQQRATQD 2489
Query: 62 QIAYFGQTPSQLLRVPHLKKMPLAEALHLQTIFRNPKEVKPYAVPSSEYCNLPAAAIHAS 121
QIAYFGQTPSQLL VPH+K+MPL + LH+QTIFRNPKE+KPY V + E CNLPA+AI AS
Sbjct: 2490 QIAYFGQTPSQLLTVPHMKRMPLKDVLHMQTIFRNPKEIKPYTVQTPERCNLPASAIQAS 2549
Query: 122 SDMVVVVDCNAPAAHVARHKWQPNTPDGQGSPFLFQNGKAISDSASGTIVRMFKGP--TG 179
SD VV+VD N PAA VA+HKWQPNTPDGQG+PFLF +GKA + S SG+++RMFKGP +G
Sbjct: 2550 SDSVVIVDMNVPAARVAQHKWQPNTPDGQGTPFLFHHGKATTTSTSGSLMRMFKGPASSG 2609
Query: 180 TGEQWQFPQALAFGVSGIRSQAIVSVTCDKEIITGGHADNSVRVISSDGAKTLETAYAHC 239
TG+ WQFPQA AF SGIRS +++++T D EIITGGHADNS++++SSDGAKTLETA+ HC
Sbjct: 2610 TGD-WQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHC 2668
Query: 240 APVTCLSLSSDSYYLVTGSRDTTILLWRIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 299
APVTCL+LS D+ +LVTGSRD+T+LLWRIH +
Sbjct: 2669 APVTCLALSPDNNFLVTGSRDSTVLLWRIH-KAFTSRTSVSEPSTGSGAPSSTSNTNLAN 2727
Query: 300 LLLEKNRRRRIEGPIQVLRGHHSEILSCCVSSDLGVVVSCSQTTDVXXXXXXXXXXXXXX 359
L K ++ R+EGPIQVLRGH E++ CCVSSD GVVVS S+++DV
Sbjct: 2728 TLANKGKKCRLEGPIQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRRL 2787
Query: 360 DGVVAHTVCLSSEGLVITWNELQHTLSTFTLNGVLTATTELSFSSSISCMEVSVDGKNAL 419
GV A ++C+SS+G+++ W+ + ++S FT+NGVL A + S+ CME+S+DG+NAL
Sbjct: 2788 VGVKADSLCISSDGVIMAWSSSEGSISVFTINGVLIAKAKFPLFCSVGCMEISMDGQNAL 2847
Query: 420 IGINSLENGRARNNDLNLQSSKPGIVDFNSESEKTHEGYRIDAPTPSICFLDLHTLEVFH 479
IG+NS N +++ + SK E R+D P+PSICFL+L+TL+VFH
Sbjct: 2848 IGMNSCSNSDYSSSNDTSKDSK--------------EIERLDVPSPSICFLNLYTLQVFH 2893
Query: 480 VLKLEEGQDITTLALNKDNTNLLVSTMDKQLIIFTDPALSLKVVDKMLKLGWE 532
VLKL +GQDIT LALN DNTNLLVST DKQLIIFTDPALSLKVVD+MLKLGWE
Sbjct: 2894 VLKLGQGQDITALALNVDNTNLLVSTEDKQLIIFTDPALSLKVVDQMLKLGWE 2946
>AT2G45540.2 | Symbols: | WD-40 repeat family protein / beige-related
| chr2:18757881-18772229 REVERSE LENGTH=3001
Length = 3001
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/533 (61%), Positives = 402/533 (75%), Gaps = 18/533 (3%)
Query: 2 ALESEYVSAHLHEWIDLIFGYKQRGKEAIAANNVFFHVTYEGTVDIDKILDPVQQRATQD 61
ALESE+VSAHLHEWIDLIFGYKQRGKEAI ANNVFF++TYEGTVDIDKI DPVQQRATQD
Sbjct: 2485 ALESEHVSAHLHEWIDLIFGYKQRGKEAIMANNVFFYITYEGTVDIDKITDPVQQRATQD 2544
Query: 62 QIAYFGQTPSQLLRVPHLKKMPLAEALHLQTIFRNPKEVKPYAVPSSEYCNLPAAAIHAS 121
QIAYFGQTPSQLL VPH+K+MPL + LH+QTIFRNPKE+KPY V + E CNLPA+AI AS
Sbjct: 2545 QIAYFGQTPSQLLTVPHMKRMPLKDVLHMQTIFRNPKEIKPYTVQTPERCNLPASAIQAS 2604
Query: 122 SDMVVVVDCNAPAAHVARHKWQPNTPDGQGSPFLFQNGKAISDSASGTIVRMFKGP--TG 179
SD VV+VD N PAA VA+HKWQPNTPDGQG+PFLF +GKA + S SG+++RMFKGP +G
Sbjct: 2605 SDSVVIVDMNVPAARVAQHKWQPNTPDGQGTPFLFHHGKATTTSTSGSLMRMFKGPASSG 2664
Query: 180 TGEQWQFPQALAFGVSGIRSQAIVSVTCDKEIITGGHADNSVRVISSDGAKTLETAYAHC 239
TG+ WQFPQA AF SGIRS +++++T D EIITGGHADNS++++SSDGAKTLETA+ HC
Sbjct: 2665 TGD-WQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHC 2723
Query: 240 APVTCLSLSSDSYYLVTGSRDTTILLWRIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 299
APVTCL+LS D+ +LVTGSRD+T+LLWRIH +
Sbjct: 2724 APVTCLALSPDNNFLVTGSRDSTVLLWRIH-KAFTSRTSVSEPSTGSGAPSSTSNTNLAN 2782
Query: 300 LLLEKNRRRRIEGPIQVLRGHHSEILSCCVSSDLGVVVSCSQTTDVXXXXXXXXXXXXXX 359
L K ++ R+EGPIQVLRGH E++ CCVSSD GVVVS S+++DV
Sbjct: 2783 TLANKGKKCRLEGPIQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRRL 2842
Query: 360 DGVVAHTVCLSSEGLVITWNELQHTLSTFTLNGVLTATTELSFSSSISCMEVSVDGKNAL 419
GV A ++C+SS+G+++ W+ + ++S FT+NGVL A + S+ CME+S+DG+NAL
Sbjct: 2843 VGVKADSLCISSDGVIMAWSSSEGSISVFTINGVLIAKAKFPLFCSVGCMEISMDGQNAL 2902
Query: 420 IGINSLENGRARNNDLNLQSSKPGIVDFNSESEKTHEGYRIDAPTPSICFLDLHTLEVFH 479
IG+NS N +++ + SK E R+D P+PSICFL+L+TL+VFH
Sbjct: 2903 IGMNSCSNSDYSSSNDTSKDSK--------------EIERLDVPSPSICFLNLYTLQVFH 2948
Query: 480 VLKLEEGQDITTLALNKDNTNLLVSTMDKQLIIFTDPALSLKVVDKMLKLGWE 532
VLKL +GQDIT LALN DNTNLLVST DKQLIIFTDPALSLKVVD+MLKLGWE
Sbjct: 2949 VLKLGQGQDITALALNVDNTNLLVSTEDKQLIIFTDPALSLKVVDQMLKLGWE 3001
>AT1G58230.1 | Symbols: | binding | chr1:21566331-21578865 FORWARD
LENGTH=2604
Length = 2604
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 195/426 (45%), Gaps = 52/426 (12%)
Query: 2 ALESEYVSAHLHEWIDLIFGYKQRGKEAIAANNVFFHVTYEGTVDIDKILDPVQQRATQD 61
ALESEYVS+HLH+WIDLIFG+KQRGK A+ A N+F+++TYEG VD++ + D +Q A +D
Sbjct: 2147 ALESEYVSSHLHDWIDLIFGHKQRGKPAVEAANIFYYLTYEGAVDVENMEDQLQISAIED 2206
Query: 62 QIAYFGQTPSQLLRVPHLKK---MPLAEALHLQTIFRNPKEVKPYAVPSSEYCNLPAAAI 118
QIA FGQTP Q+ R H ++ +P+A L+ N + P S P+A +
Sbjct: 2207 QIANFGQTPIQIFRKKHPRRGPPIPIAHPLYFAPASINLSSILPATTHS------PSAVL 2260
Query: 119 HASSDMVVVVDCNAPAAH----VARHKWQPNTPDGQGSPFLFQNGKAISDSASGTIVRMF 174
+ V VVD N + ++ W T G F F + + ++
Sbjct: 2261 Y-----VGVVDSNIVLVNQGLTLSVKIWL-TTQLHSGGNFTFSSAQDPFFGVGSDVL--- 2311
Query: 175 KGPTGTGEQWQFPQALAFGVS-GIRSQAIVSVTCDKEIITGGHADNSVRVISSDGAKTLE 233
P G LA V G + A + + + +++ G+ +NS VIS + ++
Sbjct: 2312 -SPRNIG------SPLADNVELGSQCFAAMQMPLENFLVSCGNWENSFHVISLTDGRVVQ 2364
Query: 234 TAYAHCAPVTCLSLSSDSYYLVTGSRDTTILLWRIHXXXXXXXXXXXXXXXXXXXXXXXX 293
+ H V+C+++++DS L TGS DTT+++W I
Sbjct: 2365 SIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI-----------------LRMRTPEK 2407
Query: 294 XXXXXHLLLEKNRRRRIEGPIQVLRGHHSEILSCCVSSDLGVVVSCSQTTDVXXXXXXXX 353
H + + + P +L GH I VS+DL +V+S S+
Sbjct: 2408 RVRNTHAEVLRKDIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREG 2467
Query: 354 XXXXXXD---GVVAHTVCLSSEGLVITWNELQHTLSTFTLNGVLTATTELSFSSSISCME 410
G + S G ++ + + +L +++NG A++E + I+C+E
Sbjct: 2468 RYIRSLKHPSGSAVSKLAASHHGRIVLYGDDDLSLHLYSINGKHLASSE--SNGRINCLE 2525
Query: 411 VSVDGK 416
+S G+
Sbjct: 2526 LSKCGE 2531
>AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta
repeat protein | chr1:712971-726891 REVERSE LENGTH=3601
Length = 3601
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 126/286 (44%), Gaps = 60/286 (20%)
Query: 2 ALESEYVSAHLHEWIDLIFGYKQRGKEAIAANNVFFHVTYEGTVDIDKILDPVQQRATQD 61
ALES+YVS +LH WIDLIFGYKQRGK A A NVF+H TYEG VDID + DP + +
Sbjct: 3165 ALESDYVSENLHHWIDLIFGYKQRGKAAEEAVNVFYHYTYEGNVDIDAVTDPAMKASILA 3224
Query: 62 QIAYFGQTPSQLLRVPHLKKM--------PLAEALHLQTIFRNPKEVKPYAVPSSEYCNL 113
QI +FGQTP QL H+K+ PL ++HL P E++ C+
Sbjct: 3225 QINHFGQTPKQLFPKAHVKRRTDRKIPLHPLKHSMHLV-----PHEIRK--------CSS 3271
Query: 114 PAAAIHASSDMVVVVDCNA---PAAHVARHKWQPNTPDGQGSPFLFQNGKAISDSASGTI 170
+ I D V+V N P + W PD + K +S
Sbjct: 3272 SISQIITFHDKVLVAGANCFLKPRGYTKYITW--GFPDRSLRFMSYDQDKLLS------- 3322
Query: 171 VRMFKGPTGTGEQWQFPQALAFGVSGIRSQAIVSVTCDKEIITGGHADNSVRV--ISSDG 228
T E + V+ D I+ G D V V +S DG
Sbjct: 3323 ---------THENLHESNQI----------QCAGVSHDGRIVVTGAEDGLVCVWRVSKDG 3363
Query: 229 AK-----TLETAY-AHCAPVTCLSLSSDSYYLVTGSRDTTILLWRI 268
+ LE A AH A VTCL +S + +GS D T+++W +
Sbjct: 3364 PRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDL 3409
>AT4G02660.1 | Symbols: | Beige/BEACH domain ;WD domain, G-beta
repeat protein | chr4:1159927-1173791 REVERSE LENGTH=3527
Length = 3527
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 128/286 (44%), Gaps = 60/286 (20%)
Query: 2 ALESEYVSAHLHEWIDLIFGYKQRGKEAIAANNVFFHVTYEGTVDIDKILDPVQQRATQD 61
ALES+YVS +LH WIDLIFG+KQRGK A A NVF+H TYEG VD+D + DP + +
Sbjct: 3109 ALESDYVSENLHHWIDLIFGHKQRGKAAENAVNVFYHYTYEGNVDVDAVTDPAMKASILA 3168
Query: 62 QIAYFGQTPSQLLRVPHLKKM--------PLAEALHLQTIFRNPKEVKPYAVPSSEYCNL 113
QI +FGQTP QL + PH+K+ PL ++HL P+ ++ C+
Sbjct: 3169 QINHFGQTPKQLFQKPHVKRRTDRKVPPHPLKHSMHLV-----PRNIRK--------CSS 3215
Query: 114 PAAAIHASSDMVVVVDCNA---PAAHVARHKWQPNTPDGQGSPFLFQNGKAISDSASGTI 170
I +D +++ N P + +W PD + K +S +
Sbjct: 3216 SINQIITFNDKLLLTGANCLLKPRGYKKYIRW--GFPDRTLRFMSYDQDKLLSTHEN--- 3270
Query: 171 VRMFKGPTGTGEQWQFPQALAFGVSGIRSQAIVSVTCDKEIITGGHADNSVRV--ISSDG 228
G Q Q V+ D I+ G D V V +S DG
Sbjct: 3271 -------LHEGNQIQ----------------CAGVSHDGRIVVTGAEDGLVSVWRVSKDG 3307
Query: 229 AK-----TLETAY-AHCAPVTCLSLSSDSYYLVTGSRDTTILLWRI 268
+ LE + AH A V CL +S + + S D T+++W +
Sbjct: 3308 PRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDL 3353