Miyakogusa Predicted Gene

Lj3g3v2721430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2721430.1 Non Chatacterized Hit- tr|I1I7S4|I1I7S4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,59.84,1e-18,coiled-coil,NULL; seg,NULL; Lzipper-MIP1,Ternary
complex factor MIP1, leucine-zipper,CUFF.44493.1
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37080.3 | Symbols:  | Protein of unknown function, DUF547 | ...   112   2e-25
AT4G37080.2 | Symbols:  | Protein of unknown function, DUF547 | ...   112   2e-25
AT4G37080.1 | Symbols:  | Protein of unknown function, DUF547 | ...   112   3e-25

>AT4G37080.3 | Symbols:  | Protein of unknown function, DUF547 |
           chr4:17473719-17476716 FORWARD LENGTH=610
          Length = 610

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 123/250 (49%), Gaps = 30/250 (12%)

Query: 27  NRCLSNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXX 86
           NR  +N+E+KM L+Q++DKLKRKLR EENVHR LER                        
Sbjct: 47  NRRRANKEKKMDLLQDVDKLKRKLRQEENVHRALERAFTRPLGALPRLPSYLPRHTLELL 106

Query: 87  XXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAEDP----MDQNS-IRSTKHQRSK 141
                             NFRQGL Q+A YISSK N E P    +++NS +RSTKHQRSK
Sbjct: 107 AEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNLESPNNNSLNENSPVRSTKHQRSK 166

Query: 142 SLSQSEFNSTII--------------ARXXXXXXXXXXDILTGKLVKEKQMHTKQDSLSS 187
           S+SQ EFNS I               +R          D    ++V  KQ   K + LSS
Sbjct: 167 SMSQHEFNSMITPTKKHQQSLSRSISSRKLFSSDQTVNDRSGQRVVSGKQASPKSN-LSS 225

Query: 188 I----PEGRWGKENPLFCNSLKD---KQSPEKERAKVISSIKKSPTKQEP---ADKCVDH 237
           +    P    GKEN    N+ KD   K+SPEK+  + ++S+KK     +P   ADK  + 
Sbjct: 226 VTNTKPVDVRGKENQTSSNASKDKKNKESPEKKLGRFLTSVKKKKPLIKPEAAADKHSES 285

Query: 238 LKLQLEWKIS 247
            KLQL+ +++
Sbjct: 286 TKLQLDDRLA 295


>AT4G37080.2 | Symbols:  | Protein of unknown function, DUF547 |
           chr4:17473719-17476716 FORWARD LENGTH=610
          Length = 610

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 123/250 (49%), Gaps = 30/250 (12%)

Query: 27  NRCLSNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXX 86
           NR  +N+E+KM L+Q++DKLKRKLR EENVHR LER                        
Sbjct: 47  NRRRANKEKKMDLLQDVDKLKRKLRQEENVHRALERAFTRPLGALPRLPSYLPRHTLELL 106

Query: 87  XXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAEDP----MDQNS-IRSTKHQRSK 141
                             NFRQGL Q+A YISSK N E P    +++NS +RSTKHQRSK
Sbjct: 107 AEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNLESPNNNSLNENSPVRSTKHQRSK 166

Query: 142 SLSQSEFNSTII--------------ARXXXXXXXXXXDILTGKLVKEKQMHTKQDSLSS 187
           S+SQ EFNS I               +R          D    ++V  KQ   K + LSS
Sbjct: 167 SMSQHEFNSMITPTKKHQQSLSRSISSRKLFSSDQTVNDRSGQRVVSGKQASPKSN-LSS 225

Query: 188 I----PEGRWGKENPLFCNSLKD---KQSPEKERAKVISSIKKSPTKQEP---ADKCVDH 237
           +    P    GKEN    N+ KD   K+SPEK+  + ++S+KK     +P   ADK  + 
Sbjct: 226 VTNTKPVDVRGKENQTSSNASKDKKNKESPEKKLGRFLTSVKKKKPLIKPEAAADKHSES 285

Query: 238 LKLQLEWKIS 247
            KLQL+ +++
Sbjct: 286 TKLQLDDRLA 295


>AT4G37080.1 | Symbols:  | Protein of unknown function, DUF547 |
           chr4:17474205-17476716 FORWARD LENGTH=597
          Length = 597

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 123/250 (49%), Gaps = 30/250 (12%)

Query: 27  NRCLSNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXX 86
           NR  +N+E+KM L+Q++DKLKRKLR EENVHR LER                        
Sbjct: 34  NRRRANKEKKMDLLQDVDKLKRKLRQEENVHRALERAFTRPLGALPRLPSYLPRHTLELL 93

Query: 87  XXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAEDP----MDQNS-IRSTKHQRSK 141
                             NFRQGL Q+A YISSK N E P    +++NS +RSTKHQRSK
Sbjct: 94  AEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNLESPNNNSLNENSPVRSTKHQRSK 153

Query: 142 SLSQSEFNSTII--------------ARXXXXXXXXXXDILTGKLVKEKQMHTKQDSLSS 187
           S+SQ EFNS I               +R          D    ++V  KQ   K + LSS
Sbjct: 154 SMSQHEFNSMITPTKKHQQSLSRSISSRKLFSSDQTVNDRSGQRVVSGKQASPKSN-LSS 212

Query: 188 I----PEGRWGKENPLFCNSLKD---KQSPEKERAKVISSIKKSPTKQEP---ADKCVDH 237
           +    P    GKEN    N+ KD   K+SPEK+  + ++S+KK     +P   ADK  + 
Sbjct: 213 VTNTKPVDVRGKENQTSSNASKDKKNKESPEKKLGRFLTSVKKKKPLIKPEAAADKHSES 272

Query: 238 LKLQLEWKIS 247
            KLQL+ +++
Sbjct: 273 TKLQLDDRLA 282