Miyakogusa Predicted Gene

Lj3g3v2721420.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2721420.3 Non Chatacterized Hit- tr|I1J953|I1J953_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.2,0,SUBFAMILY NOT
NAMED,NULL; AUTOPHAGY PROTEIN 16-LIKE,NULL; seg,NULL,CUFF.44492.3
         (668 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50590.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   793   0.0  

>AT3G50590.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr3:18771292-18779220 FORWARD LENGTH=1614
          Length = 1614

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/692 (62%), Positives = 485/692 (70%), Gaps = 49/692 (7%)

Query: 1    MLDLFICHLNPSAMRRLAQKXXXXXXXXXXRRYCERILRIRSTGWTQGIFANFAAESMVP 60
            MLDLFICHLNPSAMRRLAQK          RRYCERILR+RSTGWTQGIFANFAAESMVP
Sbjct: 948  MLDLFICHLNPSAMRRLAQKLEEESGDPELRRYCERILRVRSTGWTQGIFANFAAESMVP 1007

Query: 61   KGPEWGGGNWEIKTPATAKDIPKWELAAEVTPYMRTDDAAIPSIILDHIGVYLGSIKGRG 120
            KGPEWGGGNWEIKTP   K IPKWELA EV PYM+ +D  IPSI+ DHIGVYLG +KGR 
Sbjct: 1008 KGPEWGGGNWEIKTPTDMKSIPKWELAGEVMPYMKNEDGTIPSIVADHIGVYLGCVKGRV 1067

Query: 121  NTVEVREDSLVKAFIPAGNDVKANGVEAPSVQSISNQSKGVDNSQGDSFMGLGGLKKQFV 180
            N VE++EDSLV    P G  +          + +S++   +   +  S MGL  L KQ V
Sbjct: 1068 NVVEIKEDSLVSK--PGGLSLLG--------KPVSDKPLALPAGESSSMMGLESLGKQNV 1117

Query: 181  SPSADEQAKAAEEFKKSMYAAAAADGSRSDEEGVSKNKKKHVRIRDKPIDSSTVDVNKIK 240
               ADEQAKAAEEFKK+MY A   DGS SDEEGV+K KK  +RIR+KP  S+TVDVNK+K
Sbjct: 1118 ---ADEQAKAAEEFKKTMYGATG-DGSSSDEEGVTKPKKLQIRIREKP-TSTTVDVNKLK 1172

Query: 241  EAASKFKXX--XXXXXXXXXXXXXXXHDLGQILSLXXXXXXXXXXXXXXXG---DLFGTD 295
            EAA  FK                    DLGQ+LS                    D F   
Sbjct: 1173 EAAKTFKLGDGLGLTMSRTKSINAGSQDLGQMLSQPSSSTVATTTAPSSASAPVDPFAMS 1232

Query: 296  AFAQ-PQSTSQPTTGVVSRGGVKAGPIPEDFFQNTVPSLQVAASLRPAGTYLSKYAQGVE 354
            ++ Q PQ  SQP    V      A PIPEDFFQNT+PS++VA +L P GTYLSK  Q   
Sbjct: 1233 SWTQQPQPVSQPAPPGV------AAPIPEDFFQNTIPSVEVAKTLPPPGTYLSKMDQAAR 1286

Query: 355  IGKATQN-QDSASEGDVPPKSVQQPGV--------------PIEPMGLPDGGVPPQSSAQ 399
               A Q   + A+   +P   +   GV              P + +GLPDGGV  Q   Q
Sbjct: 1287 AAIAAQGGPNQANNTPLPDIGLPDGGVPQQYPQQTSQQPGAPFQTVGLPDGGVRQQYPGQ 1346

Query: 400  AAVMPTSQLQAPISSQPLDLSVLGVPNSADSGKPP-QTGSPPSSLRLGQVPRGAAASVCF 458
              V P+   Q P+S+QPLDLSVLGVPN+ DSGKPP Q  SPP+S+R GQVPRGAAA VCF
Sbjct: 1347 NQV-PS---QVPVSTQPLDLSVLGVPNTGDSGKPPGQPQSPPASVRPGQVPRGAAAPVCF 1402

Query: 459  KTGLAHLELNHLSDALSCFDESFLALAKDQSCGSDIKAQTTICAQYKITVTLLREIERLQ 518
            KTGLAHLE N L DALSCFDE+FLALAKDQS G+DIKAQ TICAQYKI VTLLREI RLQ
Sbjct: 1403 KTGLAHLEQNQLPDALSCFDEAFLALAKDQSRGADIKAQATICAQYKIAVTLLREILRLQ 1462

Query: 519  RVHGPSAISAKDEMARLSRHLGSLPLLAKHRINCIRTAIKRNMEVQNYAYSKQMLELLLS 578
            RV G SA+SAKDEMARLSRHL SLPLLAKHRINCIRTAIKRNMEVQNY YSKQMLELLLS
Sbjct: 1463 RVQGASALSAKDEMARLSRHLASLPLLAKHRINCIRTAIKRNMEVQNYGYSKQMLELLLS 1522

Query: 579  KAPASKQDEFRCLIDLCVQRGLTNKSIDPLKDHSHFCAATLSRLSTIGYDVCDLCGAKFS 638
            KAPASKQ+E R L+DLCVQRG +NKSIDPL+D S  C+ATLSRLSTIGYDVCDLCGAKF+
Sbjct: 1523 KAPASKQEELRGLVDLCVQRGTSNKSIDPLEDPSQLCSATLSRLSTIGYDVCDLCGAKFA 1582

Query: 639  AVNAPGCVICGMGSIKRSDALTGPAP--SPFG 668
            A+++PGC+ICGMGSIKRSDAL GPAP  +PFG
Sbjct: 1583 ALSSPGCIICGMGSIKRSDALAGPAPVSTPFG 1614