Miyakogusa Predicted Gene
- Lj3g3v2718790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2718790.1 Non Chatacterized Hit- tr|K4CG01|K4CG01_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,28.65,8e-18,no
description,NULL; L domain-like,NULL; F-box domain,F-box domain,
cyclin-like; FAMILY NOT
NAMED,NU,NODE_42738_length_2317_cov_20.737160.path2.1
(616 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18150.1 | Symbols: | RNI-like superfamily protein | chr3:62... 68 1e-11
AT3G59230.1 | Symbols: | RNI-like superfamily protein | chr3:21... 68 2e-11
AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein | c... 68 2e-11
AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein | c... 67 3e-11
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 67 4e-11
AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 65 1e-10
AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 64 2e-10
AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 3e-10
AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 63 5e-10
AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein | c... 63 5e-10
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 9e-10
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 61 2e-09
AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 61 2e-09
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 60 4e-09
AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 4e-09
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 59 7e-09
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 59 9e-09
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 1e-08
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 1e-08
AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 1e-08
AT1G06630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 1e-08
AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 1e-08
AT1G06630.3 | Symbols: | F-box/RNI-like superfamily protein | c... 58 2e-08
AT1G06630.2 | Symbols: | F-box/RNI-like superfamily protein | c... 58 2e-08
AT1G61330.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 57 3e-08
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 57 3e-08
AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 4e-08
AT1G60410.1 | Symbols: | F-box family protein | chr1:22259129-2... 57 4e-08
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 4e-08
AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 5e-08
AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein | c... 56 6e-08
AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein | c... 56 6e-08
AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein | c... 56 9e-08
AT5G35995.2 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT5G35995.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT3G28410.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 2e-07
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 2e-07
AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein | c... 55 2e-07
AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 54 2e-07
AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 3e-07
AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box doma... 54 3e-07
AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 3e-07
AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 3e-07
AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 3e-07
AT3G03360.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 4e-07
AT3G58940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 4e-07
AT3G03030.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 5e-07
AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 6e-07
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 6e-07
AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 7e-07
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 1e-06
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 1e-06
AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-06
AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 2e-06
AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 2e-06
AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT1G48400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 3e-06
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT3G58820.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 6e-06
AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 49 8e-06
>AT3G18150.1 | Symbols: | RNI-like superfamily protein |
chr3:6217929-6219500 FORWARD LENGTH=456
Length = 456
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 47/275 (17%)
Query: 88 DPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFD----ERKFKD 143
+ +D IS LP ++ HILS + K + TS+LS++WR +W L F+ E F D
Sbjct: 28 EAVDSISSLPDVILQHILSFIPT-KLAITTSLLSKRWRHVWCDTPSLSFNDYRLEAPFID 86
Query: 144 GIGQEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHM---VTFMVSVGLEDALLMDHWLD 200
T+ KM R H+ SL N+P H+ + F +S + D L +D W
Sbjct: 87 ETLTRYTASKMMRFHLHTSL----INNVP------HLESWIKFAMSRNV-DHLSLDLWNQ 135
Query: 201 LAKESGIKELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKL 260
+A + + FH+N + L+ L F + + LK LYL
Sbjct: 136 VANKFKFPDF-FHIN----------------SSLKQLTVVLDFSDTMIAICLKKLYLSTC 178
Query: 261 DSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCN----KMKSVKI 316
+ ++ N++F C +E L L C GLR + + RL +EI NCN ++ +++I
Sbjct: 179 LLSDESMANILFGCP-ILESLTLDHCGGLRVLDLSKSLRLRTLEI-NCNIWVPELTAMQI 236
Query: 317 NAPYLDTFGYCGKRTNS-CKVDLEDCKSLKRLSLD 350
AP+ +C + NS L D SLK L+
Sbjct: 237 VAPH----THCLRLRNSKLPCSLVDVSSLKEAKLN 267
>AT3G59230.1 | Symbols: | RNI-like superfamily protein |
chr3:21896052-21897787 REVERSE LENGTH=491
Length = 491
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 113/260 (43%), Gaps = 30/260 (11%)
Query: 86 SLDPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDE--RKFKD 143
++ P D I+ LP +I+HILS L + K+ TS+LSRKWR + L FD+ R D
Sbjct: 7 NIGPKDIINSLPEALIYHILSFL-STKEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPD 65
Query: 144 GIGQEDTS-QKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVG-LEDALLMDHWLDL 201
QE+T F D V L H+ F + G D + + W+
Sbjct: 66 MGNQEETEIHTSFMDFVDRVLALRGNS---------HVNKFSLKCGNGVDGVGVTRWILN 116
Query: 202 AKESGIKELDFHV-NKGIYIFPPSFFSSVTLTGLRLSCCN-LGF------FNNIKLPNLK 253
E + ELD + + Y+FP F S +L LR+ N L F ++ LP LK
Sbjct: 117 TLELSVSELDLSIASDTTYLFPSKVFVSKSLVRLRIEARNGLAFGSLVIDVGDVSLPKLK 176
Query: 254 NLYLQ--KLDSTQHNILNLIFCCRHSIEDLRLIQCS-GLRNVCFANLNRLNRVEIYN--- 307
LYL +LD + L+ C H +E+L +I C A++ L R+ +
Sbjct: 177 TLYLDSVELDYQIICLAKLLSGC-HVLEELVMIDVVWNFWESCSASIPTLKRLTFFTEEG 235
Query: 308 -CNKMKSVKINAPYLDTFGY 326
N SV + P L F Y
Sbjct: 236 WNNPPPSVTFDNPALVYFEY 255
>AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=675
Length = 675
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP +I IL L+ K V TS+LS++WR +W S LV F D
Sbjct: 23 DLISQLPDSLITQILFYLQT-KKAVTTSVLSKRWRSLWLSTPGLVLISNDFTD------- 74
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
F V L E +KL LH + + G D + W+D +K L
Sbjct: 75 -YNAFVSFVDKFLGFSRE-----QKLCLHKLKLSIRKGENDQDCVTRWIDFVATPKLKHL 128
Query: 211 DFHVN----KGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYL-QKLDSTQH 265
D + + + P S +S +L LRL+ LG F ++ LP LK + L Q + + +
Sbjct: 129 DVEIGPTRCECFEVIPLSLYSCESLLYLRLNHVCLGKFESVSLPCLKTMSLEQNIYANEA 188
Query: 266 NILNLIFCCRHSIEDLRLI 284
++ +LI C +EDL +
Sbjct: 189 DLESLISTC-PVLEDLSFV 206
>AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=642
Length = 642
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP +I IL L+ K V TS+LS++WR +W S LV I + T
Sbjct: 23 DLISQLPDSLITQILFYLQT-KKAVTTSVLSKRWRSLWLSTPGLVL--------ISNDFT 73
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
F V L E +KL LH + + G D + W+D +K L
Sbjct: 74 DYNAFVSFVDKFLGFSRE-----QKLCLHKLKLSIRKGENDQDCVTRWIDFVATPKLKHL 128
Query: 211 DFHVN----KGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYL-QKLDSTQH 265
D + + + P S +S +L LRL+ LG F ++ LP LK + L Q + + +
Sbjct: 129 DVEIGPTRCECFEVIPLSLYSCESLLYLRLNHVCLGKFESVSLPCLKTMSLEQNIYANEA 188
Query: 266 NILNLIFCCRHSIEDLRLI 284
++ +LI C +EDL +
Sbjct: 189 DLESLISTC-PVLEDLSFV 206
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP + HILS L K+ TS+LS+KWR ++ L DE + + + +
Sbjct: 8 DIISSLPEAISCHILSFLPT-KEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEV 66
Query: 151 SQKM--FRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
S F D V A + N P LH + + G+E ++ W++ E G+
Sbjct: 67 SSSFMDFVDRVLA-----LQGNSP-----LHKFSLKIGDGVEPDRIIP-WINNVLERGVS 115
Query: 209 ELDFHVN-KGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYL 257
+LD HV + ++FP F S TL L+L L F ++ LP LK LY+
Sbjct: 116 DLDLHVYMETEFVFPSEMFLSKTLVRLKLMLYPLLEFEDVYLPKLKTLYI 165
>AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:680541-681317 FORWARD LENGTH=258
Length = 258
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 32/239 (13%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFD----ERKFKDGIG 146
D IS LP E++HHILS + V+RTS+LS++WR +W L F+ K +
Sbjct: 28 DSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEWLMVSPKLINKTL 87
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
T+ K+ H+C S + A V + F +S +++ L LA S
Sbjct: 88 ASYTASKITSFHLCTSYSYEAGH-------VHSSIEFAMSHNVDN-------LSLAFSSF 133
Query: 207 IKELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHN 266
NK FP F++S +L + L +L + +L++L L + + + +
Sbjct: 134 PP-----CNK----FPDFFYTSSSLKRVELRSASLTPSCIVSWTSLRDLSLTRCNLSDKS 184
Query: 267 ILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEI--YNCNK--MKSVKINAPYL 321
L ++ C +E L L C L+ + + RL R+EI +C + M+S++I AP++
Sbjct: 185 FLKILSGCP-ILESLSLKFCESLKYLDLSKSLRLTRLEIERRSCFREPMQSMQIVAPHI 242
>AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18218858-18221877 FORWARD LENGTH=630
Length = 630
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIGQ 147
D IS LP +I HILS L ++D TS+LS+KW+ ++ L FD+ DG
Sbjct: 16 DIISDLPEALICHILSFLP-IEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDG--- 71
Query: 148 EDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGI 207
+ ++ +F + V L+ + PI K L F D + W+ E G+
Sbjct: 72 -ERNETIFENFVDRVLSLQGD--YPINKFSLTCRDF------TDPTCVSRWISNVMERGV 122
Query: 208 KELDF----HVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFN--NIKLPNLKNLYLQK-- 259
+LD + + G PP F S L LR+ N F + ++ LPNLK LYL K
Sbjct: 123 SDLDLRCIVYWDNG--TMPPDIFVSKALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVL 180
Query: 260 LDSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCF 294
L + + + LI C H +EDL ++ N+C+
Sbjct: 181 LRHSDNGFVKLITSC-HVLEDLFIM------NICW 208
>AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21785999-21787444
REVERSE LENGTH=426
Length = 426
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 26/239 (10%)
Query: 93 ISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDTSQ 152
IS+LP +I HILS L +KD+V T +LS +WR +W L + F D
Sbjct: 2 ISQLPDPLICHILSHL-PIKDLVTTRVLSTRWRSLWLWLPCLELNSLYFPDFNAFVSFGD 60
Query: 153 KMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKELDF 212
K F + + +N K L++ + VG++D + W+D A + I+ L
Sbjct: 61 KFFDSNRVSCIN----------KFKLYIYGY--DVGVDDPSYLTSWIDAAVKCKIQHL-- 106
Query: 213 HVN----KGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKL-DSTQHNI 267
HV K IY P S + TL L+L L + LP LK ++L+ + + N+
Sbjct: 107 HVQCLPAKYIYEMPLSLYICETLVYLKLCRVMLDDAEFVSLPCLKTIHLEYVWFPNEANL 166
Query: 268 LNLIFCCRHSIEDLRLIQCSGLRNVCFANLNR-LNRVEI----YNCNKMKSVKINAPYL 321
+ CC +E+L++ C + L+R L ++ I C+ V I+AP L
Sbjct: 167 ERFVSCCP-VLEELKIYGCGNENAITLRLLSRSLKKLSINILKSMCDFHSEVVIDAPLL 224
>AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21859148-21860672
REVERSE LENGTH=444
Length = 444
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 93 ISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDTSQ 152
+S+LP +I ILS L + KD VRTSILS +WR +W +L FD R+ + +
Sbjct: 20 LSQLPDHLICVILSHL-STKDAVRTSILSTRWRNLWQLVPVLDFDSRELRSFSEFVSFAG 78
Query: 153 KMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKELDF 212
F H ++ I+KL + + L + W+DL I+ +D
Sbjct: 79 SFFYLH----------KDSYIQKLRVCIY------DLAGNYYLTSWIDLVTRHRIQHIDI 122
Query: 213 HV--NKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHNILNL 270
V G + P S ++ TL L+LS + + LP LK L L ++ T L+
Sbjct: 123 SVFTCSGFGVIPLSLYTCDTLVHLKLSRVTMVNVEFVSLPCLKILDLDFVNFTNETTLDK 182
Query: 271 IFCCRHSIEDLRLIQCSGLRNVCFANL--NRLNRVEIY-NCNKMKSVKINAPYL 321
I C +E+L +++ S NV + L RVEI+ ++ + I+ P L
Sbjct: 183 IISCSPVLEELTIVKSSE-DNVKIIQVRSQTLKRVEIHRRFDRHNGLVIDTPLL 235
>AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=491
Length = 491
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
MD + LP E++ HILS L K+ TS+LS++WR + L FD+ F ++G
Sbjct: 1 MDRVGSLPDELLSHILSFL-TTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKP 59
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
+ D ++ F D V L AE PIKK L +G+ D+ +D W+ G
Sbjct: 60 ERDEIRQSFMDFVDRVLALQAES--PIKKFSLK-----CRIGV-DSDRVDGWISNVLNRG 111
Query: 207 IKELDFHVNKGI-----YIFPPSFFSSVTLTGLRLSC-CNLGFF-NNIKLPNLKNLYLQK 259
+ ELD + G+ Y P F+S TL L + C ++ + +I LP LK L L
Sbjct: 112 VSELDLLIILGMTMEDSYRLSPKGFASKTLVKLEIGCGIDISWVAGSIFLPMLKTLVLDS 171
Query: 260 L 260
+
Sbjct: 172 V 172
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 32/252 (12%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP V+ HILS L K+ TS+LS+KWR ++ + L FD+ ++DG + D
Sbjct: 7 DRISSLPNPVVSHILSFLPT-KEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDV 65
Query: 151 ----SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
S F D V A + N + K L + V D + W+ G
Sbjct: 66 ELSRSFMEFVDRVLA-----LQGNGSVNKFSLECSNYDV-----DLARVTGWILNVLGRG 115
Query: 207 IKELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFN----NIKLPNLKNLYLQKLDS 262
+ ELD + + Y P F S TL L+L N ++ LP LK LY+ +D
Sbjct: 116 VSELDLSILE--YPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDV 173
Query: 263 TQH--NILNLIFCCRHSIEDLRLIQCSGLRN--VCFANLNRLNRVEIYNCNKM----KSV 314
+ + L+ C +E+L L+ G N C ++ L R+ + C + KSV
Sbjct: 174 QERGFGFVKLLSGC-PVLEELVLMNI-GWENWKFCSVSVKTLKRLTFF-CEETYENPKSV 230
Query: 315 KINAPYLDTFGY 326
+ P L Y
Sbjct: 231 SFDTPNLVYLEY 242
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE LENGTH=448
Length = 448
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 96 LPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKD-GIGQE--DTSQ 152
LP E++ H+LS L K TS+LS++WR ++ L FD+ +G++ D Q
Sbjct: 12 LPDELLVHVLSSLET-KQAASTSVLSKRWRTLFAVRRNLDFDDSIISHPEVGEQNMDDVQ 70
Query: 153 KMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKELDF 212
+ FRD V L ++PI K L + D + +D W++ A E G+ EL
Sbjct: 71 ESFRDFVDKRLAFQG--SVPINKFSL------IYGDKHDDVRVDRWINTALEHGVSELHL 122
Query: 213 ---HVNKGIYIFPPSFFSSVTLTGLRLSCCNL---GFFNNIKLPNLKNLYLQKLDSTQHN 266
V + ++ FP + F S TL L L NL F ++ LP LK L L + +
Sbjct: 123 CLTSVTRRLHRFPSNVFRSTTLVKLTLG-TNLFIVYFPSDTCLPVLKILVLDSIWFDRIK 181
Query: 267 ILNLIFCCRHSIEDLRLIQCS--GLRNVCFA-NLNRLNRVEIYNC--NKMKSVKINAPYL 321
N++ ++EDL + Q S GL NV + + L+ V Y+ + ++V ++ P L
Sbjct: 182 FSNVLLAGCPALEDLTIDQKSFPGLPNVVSSKTVKSLSIVYKYSADFDWFRTVALDTPNL 241
Query: 322 DTF---GYCGKRTNSCKVD 337
T Y R C ++
Sbjct: 242 VTLLYSTYARHRYRHCNLE 260
>AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:4642528-4643930 REVERSE LENGTH=416
Length = 416
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP +I +IL+ L +++D +RTS+LS KWR W + + LVFDE+ +
Sbjct: 6 DFISDLPQSIIENILTRL-SIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVV 64
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALL-MDHWLDLAKESGIKE 209
+ R + L H PI K F +S + +D WL +GIKE
Sbjct: 65 ETNLVR-FITGVLLLHQG---PIHK-------FQLSTSFKQCRPDIDQWLLFLSRNGIKE 113
Query: 210 LDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLG---FFNNIKLPNLKNLYLQKLDSTQHN 266
L + +G + P F+ + LT L L C +F LK+L L ++
Sbjct: 114 LVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFS--YLKSLNLHQILVAPEV 171
Query: 267 ILNLIFCC 274
I +LI C
Sbjct: 172 IESLISGC 179
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 32/294 (10%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ ILS L ++ + TS+LS++WR +W L FD F ++
Sbjct: 13 DRISDLPDALLLQILSSL-PTENAIATSVLSKRWRSLWTMLPKLKFDS-NFNPVFDDDNI 70
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
MF ++V +L+ H L L T + VG+ W+ A G+++L
Sbjct: 71 DPTMFSENVYKTLSLHKAPVLESLHLSFEGRTDCLHVGI--------WIATAFARGVRKL 122
Query: 211 ---DFHVNKGIYIFPPSFFS-SVTLTGLRLSCC-NLGFFNNIKLPNLKNLYLQKLD-STQ 264
F+ P FS + +L L+L C +L F + + L +L+ LYL ++ +
Sbjct: 123 VLDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDE 182
Query: 265 HNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLN-RLNRVEIYNCNKM-----KSVKINA 318
++ NL+ C S++DL + + S F + L R+ I + + S INA
Sbjct: 183 ESVCNLLCGC-PSLQDLVVHRYSNADVATFTIASPSLQRLTIEDLRQEGGYGNGSYVINA 241
Query: 319 PYLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHPQVTRYFCEKQISNFPLLEKL 372
P L G +D+E C K L L+ +++ I+N +LE L
Sbjct: 242 PGLKYLNING------VIDIESCLIDKALELEEAKISNV---SGITNENILESL 286
>AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21768485-21770167 REVERSE LENGTH=454
Length = 454
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 27/239 (11%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
+D +S LP +++ HILSLL K+ TSILS++WR + L FD+ F ++G
Sbjct: 2 VDLVSSLPDDLLGHILSLL-TTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQ 60
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
+ +++ F D V L H + PI+K L T + D L++ W+ + G
Sbjct: 61 TREGTRQSFIDFVDRVLALHGDS--PIRKFSLKCKTGV------DLDLLNQWICNVLQRG 112
Query: 207 IKELDFHVNKGIYIFPPSFFSSVTLTGLRL-SCCNLGFF--NNIKLPNLKNLYLQKLDST 263
+ +D ++ G F S TL L+L S C + F + LP LK L L + +
Sbjct: 113 VLLIDLSMDLGHRCMFIEIFMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDSVSWS 172
Query: 264 QHNILNLIFCCRHSIEDLRLIQCSGL---RNVCFANLNRLNRVEIYNCNKMKSVKINAP 319
L + ++E L L G V A+L L +KSV ++ P
Sbjct: 173 DSGQLERLLSACPALEALNLANVHGSYPNATVSIASLKTLT---------IKSVSLSGP 222
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 87 LDPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIG 146
++ D IS+LP EV+ ILSL+ + K+ V TS+LS++W+ ++ S L D+R+
Sbjct: 1 MNAKDVISRLPDEVLGRILSLI-STKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTK 59
Query: 147 QEDTSQKMFRDHVC-ASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKES 205
Q ++ R+++ +R IKKL L + + G D+ + W+ +
Sbjct: 60 QNRI--EIHRNYMAFVDKLLDTQRGSSIKKLTLK--SHVGVRGGTDSSRIQSWICNVLDH 115
Query: 206 GIKELDFHVN-KGIY-IFPPSFFSSVTLTGLRLS-CCNLGFFNNIKLPNLKNLYLQKLD- 261
G+ +LD + KG P F S TL LR+ + ++ LP L+ L L ++
Sbjct: 116 GVMDLDVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNF 175
Query: 262 STQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPYL 321
HN++ + +E+L + + + C + L R+ I K S+ ++AP L
Sbjct: 176 VGGHNVVGTLISRCPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNL 235
Query: 322 DTFGYCG 328
+ + G
Sbjct: 236 IYYKHSG 242
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ HILS L K+ TS+LS+KWR ++ L D+ + + + +
Sbjct: 8 DVISSLPDDISSHILSFLPT-KEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEI 66
Query: 151 SQKM--FRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
S F D V A + N P LH + + G+ D + + W++ E G+
Sbjct: 67 STSFMDFVDRVLA-----LQGNSP-----LHKFSLKIGDGI-DPVRIIPWINNVLERGVS 115
Query: 209 ELDFHVN-KGIYIFPPSFFSSVTLTGLRLSCCNLGFF-----NNIKLPNLKNLYLQKLDS 262
+LD H+N + ++ P + TL L+L G + ++ LP LK LY++
Sbjct: 116 DLDLHLNLESEFLLPSQVYLCKTLVWLKL---RFGLYPTIDVEDVHLPKLKTLYIEATHF 172
Query: 263 TQHNI 267
+H +
Sbjct: 173 EEHGV 177
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 33/298 (11%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ ILS+L VKDVV TS+LS+ WR +W L FD +++ +++T
Sbjct: 14 DRISDLPEALLLQILSMLP-VKDVVTTSVLSKPWRSLWKLVPTLKFD---YENNQSEDET 69
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+ + VC L L K L + G ++ + W+ +A +++L
Sbjct: 70 ----YSEIVCRLL-------LSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDL 118
Query: 211 DFHVN--KGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNNIKLPNLKNLYLQKLD-STQHN 266
HV KG +IFP ++ TL L L S + + L +L+ L L+ +D +
Sbjct: 119 VLHVESVKGSFIFPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYKYDDS 178
Query: 267 ILNLIFCCRHSIEDLRLIQCSGLRNVCFA-NLNRLNRVEIYNCNKMKSVK---INAP--- 319
+ NL+ C + +E+L + + + L F + L R+ IY+ N + INAP
Sbjct: 179 VYNLLSGCPN-LENLVVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEYCTGYVINAPSLK 237
Query: 320 YLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHPQVTRYFCEKQISNFPLLEKLDLTVS 377
YL G+ K SC + E+ L ++ + V++ EK + +++L L +S
Sbjct: 238 YLKIDGF--KALESCLI--ENAPELVEATIMN--VSKIINEKLLETLTSVKRLSLALS 289
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ HILS L K+ TS+LS+KWR ++ L D+ + + + +
Sbjct: 8 DVISSLPDDISSHILSFLPT-KEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEI 66
Query: 151 SQKM--FRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
S F D V A + N P LH + + G+ D + + W++ E G+
Sbjct: 67 STSFMDFVDRVLA-----LQGNSP-----LHKFSLKIGDGI-DPVRIIPWINNVLERGVS 115
Query: 209 ELDFHVN-KGIYIFPPSFFSSVTLTGLRLSCCNLGFF-----NNIKLPNLKNLYLQKLDS 262
+LD H+N + ++ P + TL L+L G + ++ LP LK LY++
Sbjct: 116 DLDLHLNLESEFLLPSQVYLCKTLVWLKL---RFGLYPTIDVEDVHLPKLKTLYIEATHF 172
Query: 263 TQHNI 267
+H +
Sbjct: 173 EEHGV 177
>AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:684685-686277 FORWARD LENGTH=472
Length = 472
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 113/248 (45%), Gaps = 21/248 (8%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
MD +S LP EV ILS L K+ TS+LS+KWR ++ L FD+ +F ++G
Sbjct: 1 MDLLSSLPDEVRCLILSFL-TTKESASTSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKR 59
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
+ D + F D V L+ N I+K L T G+ A ++ WL +
Sbjct: 60 ERDGILQSFMDFVDRVLSLQG--NSSIRKFSLKCET-----GVPPA-RVNRWLCEVLQRD 111
Query: 207 IKELDFHVNKGI-YIFPPSFFSSVTLTGLRL-SCCNLGFF---NNIKLPNLKNLYLQKLD 261
+ ++D ++ G Y P F S TL L+L S N+ ++ LP LK+L + +
Sbjct: 112 VSDIDLTIDLGYGYYLPEELFVSETLVNLKLKSAFNIDWWPGAEGTSLPMLKSLCVYGVR 171
Query: 262 STQHNILNLIFCCRHSIEDLRLIQCSGL---RNVCFANLNRLNRVEIYNCNKMKSVKINA 318
+ L + C +E+L++ L V A L L+ I + N KS+ +
Sbjct: 172 VFCDDELQELLPCFPVLEELQMSNMQWLDSDETVSSATLTTLHITGIRSENP-KSISFDT 230
Query: 319 PYLDTFGY 326
P L +F Y
Sbjct: 231 PNLLSFVY 238
>AT1G06630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2031173 FORWARD LENGTH=477
Length = 477
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 89 PMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQE 148
P D I+ LP E++ ILSLL K V TS+LS+KWR ++ L FD+ G+G++
Sbjct: 10 PRDAINWLPDEILGKILSLLAT-KQAVSTSVLSKKWRTLFKLVDTLEFDDS--VSGMGEQ 66
Query: 149 DTS---QKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDA---LLMDHWLDLA 202
+ S + F+D V ++ + PI+KL L VG +D + W+
Sbjct: 67 EASYVFPESFKDLVDRTVALQC--DYPIRKLSLK-----CHVGRDDEQRKACVGRWISNV 119
Query: 203 KESGIKELDFHVN-KGIYIFPPSFFSSVTLT----GLRLSCCNLGFFNNIKLPNLKNLYL 257
G+ E+ +N +G++ P + TL G RL L + + LP+LK L++
Sbjct: 120 VGRGVSEVVLRINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSY--VSLPSLKFLFI 177
Query: 258 QKL 260
+
Sbjct: 178 HSV 180
>AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:682577-684480 FORWARD LENGTH=469
Length = 469
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 116/277 (41%), Gaps = 38/277 (13%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
+D IS LP V+ HI S + + +RTS+LS++WR +W L F+ K + +
Sbjct: 27 VDSISDLPDAVLQHIFSYI-PTELAIRTSVLSKRWRHVWSETPHLSFEWLKVSPKLINKT 85
Query: 150 ----TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKES 205
T+ K+ H+C + A+ T V+ +E A M H +D
Sbjct: 86 LASYTASKIKSFHLCTRYSYEAD-------------THHVNSSIEFA--MSHNVDDL--- 127
Query: 206 GIKELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQH 265
L F Y F F+++ +L + L +L + +LKNL L +
Sbjct: 128 ---SLAFRRCSPFYNFDDCFYTNSSLKRVELRYVDLMPRCMVSWTSLKNLSLTDCTMSDE 184
Query: 266 NILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEI----YNCNKMKSVKINAPYL 321
+ L ++ C +E L L C L+ + + RL R+EI Y M S++I APY+
Sbjct: 185 SFLEILSGC-PILESLSLKFCMSLKYLNLSKSLRLTRLEIERISYIRAPMLSMQIVAPYI 243
Query: 322 DTFGYCGKRTNSCKVDLEDCKSLKRLSLD----HPQV 354
Y R + D SL ++D HP+
Sbjct: 244 ---HYLRLRDSEAHCTFVDVSSLTEANVDVSTFHPRT 277
>AT1G06630.3 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2030344 FORWARD LENGTH=461
Length = 461
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 89 PMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQE 148
P D I+ LP E++ ILSLL K V TS+LS+KWR ++ L FD+ G+G++
Sbjct: 10 PRDAINWLPDEILGKILSLLAT-KQAVSTSVLSKKWRTLFKLVDTLEFDDS--VSGMGEQ 66
Query: 149 DTS---QKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLED---ALLMDHWLDLA 202
+ S + F+D V ++ + PI+KL L VG +D + W+
Sbjct: 67 EASYVFPESFKDLVDRTVALQC--DYPIRKLSLK-----CHVGRDDEQRKACVGRWISNV 119
Query: 203 KESGIKELDFHVN-KGIYIFPPSFFSSVTLT----GLRLSCCNLGFFNNIKLPNLKNLYL 257
G+ E+ +N +G++ P + TL G RL L + + LP+LK L++
Sbjct: 120 VGRGVSEVVLRINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSY--VSLPSLKFLFI 177
Query: 258 QKL 260
+
Sbjct: 178 HSV 180
>AT1G06630.2 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2029442 FORWARD LENGTH=403
Length = 403
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 89 PMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQE 148
P D I+ LP E++ ILSLL K V TS+LS+KWR ++ L FD+ G+G++
Sbjct: 10 PRDAINWLPDEILGKILSLLAT-KQAVSTSVLSKKWRTLFKLVDTLEFDDS--VSGMGEQ 66
Query: 149 DTS---QKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLED---ALLMDHWLDLA 202
+ S + F+D V ++ + PI+KL L VG +D + W+
Sbjct: 67 EASYVFPESFKDLVDRTVALQC--DYPIRKLSLK-----CHVGRDDEQRKACVGRWISNV 119
Query: 203 KESGIKELDFHVN-KGIYIFPPSFFSSVTLT----GLRLSCCNLGFFNNIKLPNLKNLYL 257
G+ E+ +N +G++ P + TL G RL L + + LP+LK L++
Sbjct: 120 VGRGVSEVVLRINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSY--VSLPSLKFLFI 177
Query: 258 QKL 260
+
Sbjct: 178 HSV 180
>AT1G61330.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:22622975-22624527
FORWARD LENGTH=447
Length = 447
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
M I +L E++ ILS L V+ ++ +LS+++R W L F GI
Sbjct: 9 MKLIKRLSDELVECILSFL-PVQSTLQHRVLSKRYRDTWKLSRDLDFS------GIFSVR 61
Query: 150 TSQKMFRDHVCASLNAHAERNLP-IKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
SQ + V + + P I + VL + G+ED +L W+D IK
Sbjct: 62 RSQS---EAVRIIEDVFIQHQGPEIDRFVLSLD----HTGVEDKIL--SWVDTCLRKNIK 112
Query: 209 EL--DFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIK--LPNLKNLYLQKLDSTQ 264
EL DF +K + P +F SS TLT L+L C NN+ L LK L L + + T
Sbjct: 113 ELVLDFSSSKKVMEIPLNFSSSETLTVLKLQWCRFEIPNNLPKGLRLLKTLSLMRTEVTN 172
Query: 265 HNILNLIFCCRHSIEDLRLIQC----SGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPY 320
I ++ C H +E L L++C +G+ + + + + + + S+ ++AP
Sbjct: 173 EMIDSIFNNCIH-LESLELVKCQMSGNGILTIYAHDHKKFKSLVVSCMPNLLSIFLDAPT 231
Query: 321 LDTFGYCG--KRTNSCKVD 337
L+ + Y G K N KV+
Sbjct: 232 LECYKYDGYAKTINVLKVN 250
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 87 LDPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIG 146
++ D IS+LP EV+ ILSL+ + K+ V TS+LS++W+ ++ S L D+R+
Sbjct: 1 MNAKDVISRLPDEVLGRILSLI-STKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTK 59
Query: 147 QEDTSQKMFRDHVC-ASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKES 205
Q ++ R+++ +R IKKL L + + G D+ + W+ +
Sbjct: 60 QNRI--EIHRNYMAFVDKLLDTQRGSSIKKLTLK--SHVGVRGGTDSSRIQSWICNVLDH 115
Query: 206 GIKELDFHVN-KGIY-IFPPSFFSSVTLTGLRLS-CCNLGFFNNIKLPNLKNLYLQKLD- 261
G+ +LD + KG P F S TL LR+ + ++ LP L+ L L ++
Sbjct: 116 GVMDLDVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNF 175
Query: 262 STQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPYL 321
HN++ + +E+L + + + C + L R+ I K S+ ++AP L
Sbjct: 176 VGGHNVVGTLISRCPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNL 235
Query: 322 DTFGYCG 328
+ + G
Sbjct: 236 IYYKHSG 242
>AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7515217-7516916
FORWARD LENGTH=472
Length = 472
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D ISKLP ++ ILS L KD+VRTS+LS++W+ +W L D +F DT
Sbjct: 18 DLISKLPEVLLSQILSYLPT-KDIVRTSVLSKRWKSVWLLIPGLDLDSSEFP----HYDT 72
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
F D + L E N P LH + + D + W D ++ L
Sbjct: 73 ----FVDFMNEFLFFSREEN-P----CLHKLKLSIQKNENDPSCVTLWTDCVARGKLQHL 123
Query: 211 DFHVNKGIY------IFPPSFFSSVTLTGLRLSCCNLGFFNNI--KLPNLKNLYLQK-LD 261
D + + P S + TL LRL LG F+ LP+LK++ L++ +
Sbjct: 124 DVEFGGRVMEREFWEMMPLSLYICKTLLHLRLYRVLLGNFDQSVDSLPSLKSMCLEENVY 183
Query: 262 STQHNILNLIFCCRHSIEDLRLIQ 285
S + ++ +LI CR +EDL +++
Sbjct: 184 SNEASLESLISSCR-VLEDLTIVK 206
>AT1G60410.1 | Symbols: | F-box family protein |
chr1:22259129-22260526 FORWARD LENGTH=406
Length = 406
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 26/257 (10%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D +S LP ++ ILS L + K+ VRTS+LS +W +W S+L D F+D G+ D
Sbjct: 10 DRLSDLPCHLLCRILSNL-STKESVRTSVLSPRWSNLWSLVSVLDLD---FQDFKGEHDM 65
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+ F D + + H E L +K + + + L + + L+ G+ +L
Sbjct: 66 GE--FID---SFMEYHEELGLKLKSFNMF---YDANEHLHEPFV--RRLNKVVRRGVCDL 115
Query: 211 DFH----VNKGIYIFPPSFFSSVTLTGLRLSCCNLGF--FNNIKLPNLKNLYLQKLDSTQ 264
+ V+ + PPS +S TL L L C ++ LP++K +Y + +
Sbjct: 116 NIQNMVDVDVALVRMPPSLYSCATLVNLILYCVVFDHPRSKSVSLPSVKKMYFEGVKFDG 175
Query: 265 HNILNLIFCCRHSIEDLRLIQCSG--LRNVCFANLNRLN-RVEI--YNCNKMKSVKINAP 319
++L + +E+L +I L +C + + + R+E + C+ K V+I++P
Sbjct: 176 DSVLETLISHSPVLEELTVIPHPEDYLEVICVRSQSLESFRLESKRFECDNPK-VEIDSP 234
Query: 320 YLDTFGYCGKRTNSCKV 336
L+ C K+ S K+
Sbjct: 235 SLEFMSICDKKPESLKI 251
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 17/172 (9%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D ISKLP +I IL L +KD+VRTS LS +W+ +W L D +F+D
Sbjct: 28 DLISKLPDSLITQIL-LYLPIKDIVRTSSLSSRWKSLWLLIPRLDLDSEEFQD------- 79
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
F + ++ E + + KL L + D + W+D +K L
Sbjct: 80 -YNAFVGFMNKFIDFSGEEKICLDKLKLSSRK-----TVNDLPCVTRWIDFVVRRKLKHL 133
Query: 211 DFH--VN-KGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQK 259
D VN K + P S + TL LRL LG F + LP LK + L++
Sbjct: 134 DVECLVNRKFLEEMPLSLYVCDTLVNLRLHRVLLGKFEAVSLPCLKTMRLEE 185
>AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:15824938-15826391 REVERSE LENGTH=427
Length = 427
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGI-GQE 148
MDC LP +++ IL LL K+ V TS+LS++WR ++ D F D I G+
Sbjct: 1 MDC---LPDDLLVQILYLLPT-KEAVSTSVLSKRWRTLFTRS-----DNLDFHDPISGRP 51
Query: 149 DTSQKMFRDHVCASLNAHAERNLPIKKLVLH--MVTFMVSVGLEDALLMDHWLDLAKESG 206
+ K F D V +SL ++ IKK LH + TF V +D W+ A E G
Sbjct: 52 EDILKSFNDFVDSSLAFQGGKH--IKKFSLHTKIKTFEYHV-------LDRWICNALEHG 102
Query: 207 IKELDFHVNKG----IYIFPPSFFSSVTLT----GLRLSCCNLGFFNNIKLPNLKNLYLQ 258
+ EL H+ ++ P F+S TL G RL C + F + LP LK L L
Sbjct: 103 VSELHLHLMHESWPWLFSIPSKVFNSSTLVKLSLGSRLYCPS--FPPDTSLPALKVLLLD 160
Query: 259 KLDSTQHNILNLIFCCRHSIEDLRL 283
+ + N+ ++EDL +
Sbjct: 161 SILFRDDQLSNVFLAACPALEDLTI 185
>AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 105/240 (43%), Gaps = 23/240 (9%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ HILS LR KD VRTS+LS +WR +W L D+ F D D
Sbjct: 11 DRISILPEPLLCHILSFLRT-KDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSD-----DN 64
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
F D LN E L KL + +S DA LM LD K E+
Sbjct: 65 PSASFVDKF---LNFRGESYLRGFKLNTDHDVYDIST--LDACLMR--LDKCKIQHF-EI 116
Query: 211 DFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHNILNL 270
+ I + P TL L+LS L F ++ LP L+ ++ +K+ +
Sbjct: 117 ENCFGFCILLMPLIIPMCHTLVSLKLSFVILSKFGSLSLPCLEIMHFEKVIFPSDKSAEV 176
Query: 271 IFCCRHSIEDLRLIQCSG-----LRNVCFANLNR--LNRVEI-YNCNKMKSVKINAPYLD 322
+ C + DLR+ Q SG + VC A+L L R + Y N +V I+ P L+
Sbjct: 177 LIACSPVLRDLRISQ-SGDDAVEVLRVCSASLKSFTLKRTDHDYVGNGEYTVVIDTPRLE 235
>AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 105/240 (43%), Gaps = 23/240 (9%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ HILS LR KD VRTS+LS +WR +W L D+ F D D
Sbjct: 11 DRISILPEPLLCHILSFLRT-KDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSD-----DN 64
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
F D LN E L KL + +S DA LM LD K E+
Sbjct: 65 PSASFVDKF---LNFRGESYLRGFKLNTDHDVYDIST--LDACLMR--LDKCKIQHF-EI 116
Query: 211 DFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHNILNL 270
+ I + P TL L+LS L F ++ LP L+ ++ +K+ +
Sbjct: 117 ENCFGFCILLMPLIIPMCHTLVSLKLSFVILSKFGSLSLPCLEIMHFEKVIFPSDKSAEV 176
Query: 271 IFCCRHSIEDLRLIQCSG-----LRNVCFANLNR--LNRVEI-YNCNKMKSVKINAPYLD 322
+ C + DLR+ Q SG + VC A+L L R + Y N +V I+ P L+
Sbjct: 177 LIACSPVLRDLRISQ-SGDDAVEVLRVCSASLKSFTLKRTDHDYVGNGEYTVVIDTPRLE 235
>AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774074 FORWARD LENGTH=314
Length = 314
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 63/294 (21%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF-------- 141
MD S LP E+++HILS L + K+ TS+LS++WR ++ L FD+ F
Sbjct: 1 MDLFSSLPNELLYHILSFL-STKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
Query: 142 -KDGIGQEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLD 200
K+GI Q F D V L+ H + IK L T + D+ +D W+
Sbjct: 60 EKEGILQS------FMDFVDRVLDLHGDS--LIKTFSLKCKTGV------DSDHVDRWIC 105
Query: 201 LAKESGIKELDFHVN-KGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNN-IKLPNLKNLYL 257
G+ +LD ++ + +Y P S TL LR+ S +L ++ + LP LK L
Sbjct: 106 NVLARGVSDLDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL-- 163
Query: 258 QKLDSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKIN 317
+L+ + C + L L+ C L + N K +V ++
Sbjct: 164 ---------VLDSCWLCIGQFQIL-LLACPALEELDMTNTRW----------KDSNVTVS 203
Query: 318 APYLDTFGYCGKRTNSCKVDLEDCKS---LKRLSLDHPQ-VTRYFCEKQISNFP 367
+ L +DL C S LK LS D P V Y+C+ ++P
Sbjct: 204 SSILKEL----------TIDLHGCCSVVNLKSLSFDAPSLVYFYYCDSLAEDYP 247
>AT5G35995.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:14136707-14138230 REVERSE LENGTH=455
Length = 455
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 150/361 (41%), Gaps = 54/361 (14%)
Query: 91 DCISKLPLEVI-HHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDG--IGQ 147
D IS LP EV+ ILSLL K VV TS+LS++WR +++ D +D I
Sbjct: 5 DFISSLPDEVLGKKILSLL-PTKLVVSTSVLSKRWRNLFH-----FVDSFDLEDSTPIRN 58
Query: 148 EDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGI 207
D+ +D V A L+ N PIK+L L+ SV + W+ A + G
Sbjct: 59 ADSFSDFMKDTV-ALLS-----NCPIKRLTLNSHYEKSSV--------NRWIRSALKRGC 104
Query: 208 KELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIK------LPNLKNLYLQKLD 261
EL+ Y+ FF + TL L LS N+ P LK L L +
Sbjct: 105 LELNLQSQYDHYLDIGIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAV- 163
Query: 262 STQHNILNLIFCCRHSIEDLRLI-------QCSGLRNVCFANLNRLNRVEIYNCNKMK-- 312
+ + N + +E+L ++ Q + R+V A++ RL V + N
Sbjct: 164 VAKPALYNWLISGCPVLEELFILDVGSGDDQPTWTRSVVSASIKRLTIVFHFPHNTYPYE 223
Query: 313 -SVKINAPYLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHPQVTRYFCEKQISNFPL--- 368
V+I P L+ Y R++ VD D + RL L ++T F +++N
Sbjct: 224 DDVEIKTPNLEFLDYSALRSDGSDVDYLDSLAEARLDLRLWELTNTFDFGEVTNLVSAIR 283
Query: 369 -LEKLDLTVS--DTMKYVTIRNP--------QLQSIALKGYKKLGDVTIDAPNLLSFEFK 417
++ L L+ S + Y P ++S G++ L + + +PNL + K
Sbjct: 284 NVKTLHLSSSSLEAFYYRCYTMPVFDKLIHLSIESDKENGWQALPRLLLKSPNLQTLAIK 343
Query: 418 G 418
G
Sbjct: 344 G 344
>AT5G35995.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:14136707-14138230 REVERSE LENGTH=455
Length = 455
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 150/361 (41%), Gaps = 54/361 (14%)
Query: 91 DCISKLPLEVI-HHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDG--IGQ 147
D IS LP EV+ ILSLL K VV TS+LS++WR +++ D +D I
Sbjct: 5 DFISSLPDEVLGKKILSLL-PTKLVVSTSVLSKRWRNLFH-----FVDSFDLEDSTPIRN 58
Query: 148 EDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGI 207
D+ +D V A L+ N PIK+L L+ SV + W+ A + G
Sbjct: 59 ADSFSDFMKDTV-ALLS-----NCPIKRLTLNSHYEKSSV--------NRWIRSALKRGC 104
Query: 208 KELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIK------LPNLKNLYLQKLD 261
EL+ Y+ FF + TL L LS N+ P LK L L +
Sbjct: 105 LELNLQSQYDHYLDIGIFFRNNTLVKLTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAV- 163
Query: 262 STQHNILNLIFCCRHSIEDLRLI-------QCSGLRNVCFANLNRLNRVEIYNCNKMK-- 312
+ + N + +E+L ++ Q + R+V A++ RL V + N
Sbjct: 164 VAKPALYNWLISGCPVLEELFILDVGSGDDQPTWTRSVVSASIKRLTIVFHFPHNTYPYE 223
Query: 313 -SVKINAPYLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHPQVTRYFCEKQISNFPL--- 368
V+I P L+ Y R++ VD D + RL L ++T F +++N
Sbjct: 224 DDVEIKTPNLEFLDYSALRSDGSDVDYLDSLAEARLDLRLWELTNTFDFGEVTNLVSAIR 283
Query: 369 -LEKLDLTVS--DTMKYVTIRNP--------QLQSIALKGYKKLGDVTIDAPNLLSFEFK 417
++ L L+ S + Y P ++S G++ L + + +PNL + K
Sbjct: 284 NVKTLHLSSSSLEAFYYRCYTMPVFDKLIHLSIESDKENGWQALPRLLLKSPNLQTLAIK 343
Query: 418 G 418
G
Sbjct: 344 G 344
>AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 63/294 (21%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF-------- 141
MD S LP E+++HILS L + K+ TS+LS++WR ++ L FD+ F
Sbjct: 1 MDLFSSLPNELLYHILSFL-STKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
Query: 142 -KDGIGQEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLD 200
K+GI Q F D V L+ H + IK L T + D+ +D W+
Sbjct: 60 EKEGILQS------FMDFVDRVLDLHGDS--LIKTFSLKCKTGV------DSDHVDRWIC 105
Query: 201 LAKESGIKELDFHVN-KGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNN-IKLPNLKNLYL 257
G+ +LD ++ + +Y P S TL LR+ S +L ++ + LP LK L
Sbjct: 106 NVLARGVSDLDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL-- 163
Query: 258 QKLDSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKIN 317
+L+ + C + L L+ C L + N K +V ++
Sbjct: 164 ---------VLDSCWLCIGQFQIL-LLACPALEELDMTNTRW----------KDSNVTVS 203
Query: 318 APYLDTFGYCGKRTNSCKVDLEDCKS---LKRLSLDHPQ-VTRYFCEKQISNFP 367
+ L +DL C S LK LS D P V Y+C+ ++P
Sbjct: 204 SSIL----------KELTIDLHGCCSVVNLKSLSFDAPSLVYFYYCDSLAEDYP 247
>AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 63/294 (21%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF-------- 141
MD S LP E+++HILS L + K+ TS+LS++WR ++ L FD+ F
Sbjct: 1 MDLFSSLPNELLYHILSFL-STKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
Query: 142 -KDGIGQEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLD 200
K+GI Q F D V L+ H + IK L T + D+ +D W+
Sbjct: 60 EKEGILQS------FMDFVDRVLDLHGDS--LIKTFSLKCKTGV------DSDHVDRWIC 105
Query: 201 LAKESGIKELDFHVN-KGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNN-IKLPNLKNLYL 257
G+ +LD ++ + +Y P S TL LR+ S +L ++ + LP LK L
Sbjct: 106 NVLARGVSDLDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL-- 163
Query: 258 QKLDSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKIN 317
+L+ + C + L L+ C L + N K +V ++
Sbjct: 164 ---------VLDSCWLCIGQFQIL-LLACPALEELDMTNTRW----------KDSNVTVS 203
Query: 318 APYLDTFGYCGKRTNSCKVDLEDCKS---LKRLSLDHPQ-VTRYFCEKQISNFP 367
+ L +DL C S LK LS D P V Y+C+ ++P
Sbjct: 204 SSIL----------KELTIDLHGCCSVVNLKSLSFDAPSLVYFYYCDSLAEDYP 247
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 50/303 (16%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS+L +++ ILS + KDVV TS+LS++W+ +W ++ E ++ D D
Sbjct: 1 MDRISQLSDDLLLQILSFIPG-KDVVATSLLSKRWQSLW-----MLVSELEYDDSYHTGD 54
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLE-DALLMDHWLDLAKESGIK 208
K F V SL ++ N P+ K LH+ ++G + A+ + W+ A ++
Sbjct: 55 --YKSFSQFVYRSLLSN---NAPVIK-HLHL-----NLGPDCPAIDIGLWIGFALTRRLR 103
Query: 209 ELDFHV----NKGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNNIKLPNLKNLYLQKLD-S 262
+L ++ N + P S ++S TL LRL + L +++ LP+LK L+L+ +D
Sbjct: 104 QLKINIRTSSNDASFSLPSSLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYE 163
Query: 263 TQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPYLD 322
++ +L+F C NL L VE ++ + V P L
Sbjct: 164 DDASLPSLLFGC--------------------PNLEEL-FVERHDQDLEMDVTFVVPSLR 202
Query: 323 TFGYCGKRTNSCKVDLEDCKSLKRLSLDHPQVTRYFCEKQISNFPLL--EKLDLTVSDTM 380
K C + D SLK L++ V + +QI N P L +D+T T
Sbjct: 203 RLSMIDKNYGQCDRYVIDVPSLKYLNITDDAV---YDVRQIENMPELVEAHVDITQGVTH 259
Query: 381 KYV 383
K++
Sbjct: 260 KFL 262
>AT3G28410.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:10640152-10642071 REVERSE LENGTH=465
Length = 465
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 50/268 (18%)
Query: 87 LDPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIG 146
+D D I+ +P +++HHILS + +RTS+LSR+WR +W L + K K G
Sbjct: 24 IDGADFINYMPDDILHHILSFI-PTDLAMRTSVLSRRWRHVWCETPCL---DIKLKHG-- 77
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALL--MDHWLDLAKE 204
+T+Q + PI + +F + + L D + +D W++ A
Sbjct: 78 --ETNQTL------------TSYTAPI------ITSFKLVMDLNDNTVPQVDSWIEFALS 117
Query: 205 SGIKEL-----DFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNI--------KLPN 251
++ L DF K Y FP F+ S +L L ++ L FF+ I L N
Sbjct: 118 RNVQNLSVFVRDFTYTKT-YRFPDIFYISSSLKQLDVT---LDFFDMIPTCAVSWKSLRN 173
Query: 252 LKNLYLQKLDSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEI-YNCNK 310
L + Q D + HNIL+ C +E L L C L + + L R++I +
Sbjct: 174 LTLRFCQIPDESMHNILS---GC-PILESLTLDTCRLLERLDLSKSPNLRRLDINRQYRR 229
Query: 311 MKSVKINAPYLDTFGYCGKRTNSCKVDL 338
+ I AP++ T S VD+
Sbjct: 230 TGPIAIVAPHIYYLRLTYSSTPSTIVDV 257
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 32/244 (13%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP ++ ILS L VV TS+LS++WR +W L FD + ++
Sbjct: 21 DRISELPDGLLLKILSSL-PTNIVVATSVLSKQWRSLWKLVPNLEFDSDDY-------ES 72
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTF-MVSVGLEDALLMDHWLDLAKESGIKE 209
F + VC S +H L + L V F V +GL W+ +A ++E
Sbjct: 73 EHYTFSEIVCKSFLSHKAPVL--ESFRLKFVNFNPVDIGL--------WVGIAFSRHLRE 122
Query: 210 --LDFH---VNKGI-YIFPPSFFSSVTLTGLRLSCCNL-GFFNNIKLPNLKNLYLQKLD- 261
LDF+ + KG+ + FP S + TL L+L C L + + + +L+ L+L+ +
Sbjct: 123 LVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRY 182
Query: 262 STQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFA-NLNRLNRVEIYNCN---KMKSVKIN 317
+ ++ NL+ C +E+LRL + F + L R+ I++ N + IN
Sbjct: 183 KDESSVRNLLSGC-PGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVIN 241
Query: 318 APYL 321
AP+L
Sbjct: 242 APFL 245
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 32/244 (13%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP ++ ILS L VV TS+LS++WR +W L FD + ++
Sbjct: 21 DRISELPDGLLLKILSSL-PTNIVVATSVLSKQWRSLWKLVPNLEFDSDDY-------ES 72
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTF-MVSVGLEDALLMDHWLDLAKESGIKE 209
F + VC S +H L + L V F V +GL W+ +A ++E
Sbjct: 73 EHYTFSEIVCKSFLSHKAPVL--ESFRLKFVNFNPVDIGL--------WVGIAFSRHLRE 122
Query: 210 --LDFH---VNKGI-YIFPPSFFSSVTLTGLRLSCCNL-GFFNNIKLPNLKNLYLQKLD- 261
LDF+ + KG+ + FP S + TL L+L C L + + + +L+ L+L+ +
Sbjct: 123 LVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRY 182
Query: 262 STQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFA-NLNRLNRVEIYNCN---KMKSVKIN 317
+ ++ NL+ C +E+LRL + F + L R+ I++ N + IN
Sbjct: 183 KDESSVRNLLSGC-PGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVIN 241
Query: 318 APYL 321
AP+L
Sbjct: 242 APFL 245
>AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774620 FORWARD LENGTH=465
Length = 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF-------- 141
MD S LP E+++HILS L + K+ TS+LS++WR ++ L FD+ F
Sbjct: 1 MDLFSSLPNELLYHILSFL-STKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
Query: 142 -KDGIGQEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLD 200
K+GI Q F D V L+ H + ++ + G+ D+ +D W+
Sbjct: 60 EKEGILQS------FMDFVDRVLDLHGDS-------LIKTFSLKCKTGV-DSDHVDRWIC 105
Query: 201 LAKESGIKELDFHVN-KGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNN-IKLPNLKNLYL 257
G+ +LD ++ + +Y P S TL LR+ S +L ++ + LP LK L L
Sbjct: 106 NVLARGVSDLDLFIDFRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTLVL 165
Query: 258 QKLDSTQHNILNLIFCCRHSIEDLRLIQCSGL-RNVCFAN--LNRLNRVEIYNCNK---M 311
L+ C ++E+L + NV ++ L L ++++ C +
Sbjct: 166 DSCWLCIGQFQILLLACP-ALEELDMTNTRWKDSNVTVSSSILKELT-IDLHGCCSVVNL 223
Query: 312 KSVKINAPYLDTFGYC 327
KS+ +AP L F YC
Sbjct: 224 KSLSFDAPSLVYFYYC 239
>AT2G42720.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr2:17785653-17787211 FORWARD LENGTH=443
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 152/360 (42%), Gaps = 71/360 (19%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS LP E++ HILS L + K+ TS LS +W+ ++ VF D Q +
Sbjct: 1 MDRISSLPDEILEHILSFL-STKEAALTSSLSTRWKNVF------VFVPSLHLDYARQHE 53
Query: 150 TSQKM--FRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLD-LAKESG 206
++ F D V N N PIKKL L + + L++ + W+ + G
Sbjct: 54 NPREFIDFVDFVNTLFNRKG--NSPIKKLALK-IHLKDNQSLQNQTHVQSWIHRVLSRGG 110
Query: 207 IKELDFHVN-KGIY-IFPPSFFSSVTLTGLRLSCCNLGF-----FNNIKLPNLKNLYLQK 259
+ +LD + KG + + P F S TL LRL GF N+ LP LK L L
Sbjct: 111 VTDLDLFITFKGKFQLVPLLIFKSNTLVKLRL---GRGFTIKLCHENVYLPMLKTLCLDT 167
Query: 260 LD-STQHNIL-NLIFCC----RHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKS 313
+D HN+ L+ C +ED R Q G +V +L RL R+ ++ +
Sbjct: 168 VDFDGDHNVFETLLPRCPLLEELVLEDQRWKQWCG--SVSSPSLKRL-RIRFFH---IPI 221
Query: 314 VKINAP---YLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHPQVTRYFCEKQISNFPLLE 370
+ ++ P YL+ G + + +D SL L+H + E+Q L
Sbjct: 222 ISLDVPGLVYLELSCIFGSKYANVNLD-----SLVEARLNH------WVEEQ-----ELR 265
Query: 371 KL-----DLTVSDTMKYVTIRNPQLQSIALKGYKKLGDVTIDAPNLLSFEFKGESMPSFD 425
KL L +D M +T G +K+ + + + L F F G+ +P FD
Sbjct: 266 KLRDGSSHLVPADMMDLIT------------GIRKVKVLHLTSDALELFYFSGQELPMFD 313
>AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8060681-8062231 REVERSE LENGTH=434
Length = 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF-KDGIGQE 148
MD +S LP EV++HILS L K+ TSILS++WR ++ L D+ F G+E
Sbjct: 1 MDHVSSLPDEVLYHILSFL-TTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKE 59
Query: 149 DTS--QKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
D QK F V L N PIKKL L + T D+ +D W+ A G
Sbjct: 60 DRYEIQKSFMKFVDRVLALQG--NSPIKKLSLKLRTGF------DSHRVDGWISNALARG 111
Query: 207 IKELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHN 266
+ ELD + + ++ L +R+ G +I LP LK L L + N
Sbjct: 112 VTELDLLIILNLV--------TLKLNSVRVDWLAAG---DIFLPMLKTLVLHSVRLCVDN 160
Query: 267 I 267
+
Sbjct: 161 V 161
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 27/235 (11%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
MD SKLP EVI HILS L K+ TS+L++KWR ++ L F++ F ++G
Sbjct: 6 MDLFSKLPDEVISHILSSLPT-KEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKR 64
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
++D + F D V L PIKK L++ T + D +D W+ + G
Sbjct: 65 EKDGILRSFMDFVDRVLALQGAS--PIKKFSLNVKTGV------DPDRVDRWICNVLQRG 116
Query: 207 IKELDFHVN-KGIYIFPPSFFSSVTLTGLRLS-CCNLGFF-NNIKLPNLKNLYLQKLDST 263
+ L ++ + Y P S TL L+ +L + +++ LP LK L L+ ++
Sbjct: 117 VSHLALFMDFEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFG 176
Query: 264 QHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINA 318
+ L L C L + N+ +R I + + +K++KI +
Sbjct: 177 RGQFQTL------------LPACPVLEELMLLNMEWKDRNVILSSSSLKNLKITS 219
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF-KDGIGQED 149
D IS LP ++ H+LS L + TS+L+++WR + L D + + +G+
Sbjct: 12 DIISNLPDALLCHVLSFLPTT-EAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGRRK 70
Query: 150 -----TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKE 204
S K+F D V A + N P+KK L +G D ++ W+ +
Sbjct: 71 RLELRKSFKLFVDRVMA-----LQGNAPLKKFSLR-----CKIG-SDPSRVNGWVLKVLD 119
Query: 205 SGIKELDFHVNKGI-YIFPPSFFSSVTLTGLRLS-----CCNLGFFNNIKLPNLKNLYLQ 258
G++ELD ++ Y PP + TL L++S ++G F LP LK L+L
Sbjct: 120 RGVEELDLYIASEYEYPLPPKVLMTKTLVSLKVSGTDEFTIDVGEFF---LPKLKTLHLS 176
Query: 259 KL---DSTQHNILNLIFCCRHSIEDLRLIQCS-GLRNVCFANLNRLNRVEIYNCNKM--- 311
+ D LI C H++E+L +I+ C + L RV I +C +
Sbjct: 177 AISFGDEGGPPFAKLISAC-HALEELVMIKMMWDYWEFCSVSSPSLKRVSI-DCENIDEN 234
Query: 312 -KSVKINAPYL 321
KSV + P L
Sbjct: 235 PKSVSFDTPNL 245
>AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
F-box domain, Skp2-like (InterPro:IPR022364),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is:
F-box/RNI-like/FBD-like domains-containing protein
(TAIR:AT5G53635.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:21788311-21790690
REVERSE LENGTH=517
Length = 517
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 131/342 (38%), Gaps = 59/342 (17%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+ ++ IL+ L KDVV+TS+LS +WR +W L D R F D
Sbjct: 22 DRISQFYESLLCQILNYL-PTKDVVKTSVLSTRWRSLWLLVPSLELDSRDFSDFNTFVSF 80
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+ F + R L I KL L +S ED + W+D A + I+ L
Sbjct: 81 CDRYF----------DSNRVLCINKLKL-----TISENEEDGFYLKSWIDAAAKRKIQHL 125
Query: 211 DFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQ-KLDSTQHNILN 269
D + + + L LRL +L P +K ++L+ + +
Sbjct: 126 DVQFLPQFHKIHFNLYKCEALVSLRLFEVSLDKGRIFSFPCMKTMHLEDNVYPNEATFKE 185
Query: 270 LIFCCRHSIEDLRLIQCSGLRNVCFANLNRLN-RVEIYNCNKMKSVKINA-PYLDTFGYC 327
LI CC +EDL +I G+ F R + + + C K ++ N P TF
Sbjct: 186 LISCC-PVLEDLTVI-IYGMDRKVFQIEGRYDAKFVSFPCMKTMHLEDNMYPNESTF--- 240
Query: 328 GKRTNSCKVDLEDCKSL-----KRLSLDHPQVTRYFCEKQISNFPLLEKLDLTVSDTMKY 382
K+ SC LED + +++ H Q + F K++S+F
Sbjct: 241 -KKLISCCPVLEDLTVIIYGMDRKVFRVHSQSLKRFSLKRVSSF---------------- 283
Query: 383 VTIRNPQLQSIALKGYKKLGDVTIDAPNLLSFEFKGESMPSF 424
L +AL G V IDAP L S SF
Sbjct: 284 -------LHEVALSG------VVIDAPLLCSLRINDNVSKSF 312
>AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:21631947-21633642 FORWARD LENGTH=505
Length = 505
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 108/260 (41%), Gaps = 42/260 (16%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDER------KFKDG 144
D IS LP ++ HILS L N K+ TS+L++KWR ++ S L FD+ K
Sbjct: 8 DIISGLPDSLLCHILSFL-NTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPA 66
Query: 145 IGQED-------------TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLED 191
+ ED TS F D V + N P+ K L + + D
Sbjct: 67 VSGEDYLKMINERSDQLSTSFMDFVDQV-----LRLQDNSPLHKFSLKIRDCV------D 115
Query: 192 ALLMDHWLDLAKESGIK--ELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFN--NI 247
+ + W+ E G+ ELD H+ K P F S TL L+LS F + ++
Sbjct: 116 IVRIICWILKVLERGVSDLELDMHL-KWKSSLPSKIFLSETLVRLKLSVERGPFIDVEDV 174
Query: 248 KLPNLKNLYLQKLDSTQHNI-LNLIFCCRHSIEDLRLIQCS----GLRNVCFANLNRLNR 302
LP LK L++ + +H I LN + H +E+L L S +V L RL
Sbjct: 175 HLPKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLTF 234
Query: 303 V-EIYNCNKMKSVKINAPYL 321
E+ SV N P L
Sbjct: 235 CGEVMQDENPISVSFNTPNL 254
>AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19046748
FORWARD LENGTH=346
Length = 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP +I IL L + KD VRTS LS KWR +W S L D +
Sbjct: 19 DRISQLPEPLISEILFHL-STKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSF 77
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+ F H R+ I+KL L + D + W+D A I+ L
Sbjct: 78 VESFFDSH----------RDSWIRKLRLDLGYH------HDKYDLMSWIDAATTRRIQHL 121
Query: 211 D---FHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHNI 267
D FH NK P S ++ TL LRL L + LP LK ++ + +
Sbjct: 122 DVHCFHDNK----IPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETT 177
Query: 268 LNLIFCCRHSIEDLRLIQCSGLR-NVCFANLNRLNRVEIYNCNKMKSVKINAPYL 321
L + +E+L L + NV + L R++I N+ V I AP L
Sbjct: 178 LQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDI---NEFIDVVIYAPLL 229
>AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13326853-13328315
FORWARD LENGTH=431
Length = 431
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS+ P ++ ILS + KDV+ TS+LS++W +W L +D
Sbjct: 1 MDIISQCPDHLLLRILSFI-PTKDVIVTSLLSKRWGSLWRWVPKLEYDF----------- 48
Query: 150 TSQKM-FRDHVCASL---NAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKES 205
T Q M F V SL NA +L +K ++L+ V +G W+D+A
Sbjct: 49 TRQNMRFVKFVYRSLLQNNAPVLESLHLKNIILYAECRTVDIG--------GWIDIAVSR 100
Query: 206 GIKELDFHVNKG--IYIFPPSFFSSVTLTGLRLS---CCNLGFFNNIKLPNLKNLYLQKL 260
++EL+ +N + P S ++ TL L+ C + + LP+LK L+L+ +
Sbjct: 101 RVRELEISINCSDEKFRLPSSLYTCGTLESFILTIKHCHLVDVPLAVCLPSLKKLHLRCI 160
Query: 261 D-STQHNILNLIFCCRHSIEDLRLIQ 285
+ +L LI C + +E+LRL +
Sbjct: 161 GWAYNATLLRLISGCTN-LEELRLAR 185
>AT3G03360.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:795218-796918 FORWARD LENGTH=481
Length = 481
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 35/271 (12%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWY-SYSLLVFDERKFKDGIGQ-- 147
D IS+LP +++ ILS L + ++TS+LSR+WR +W ++SL +R I +
Sbjct: 37 DLISRLPDDILQLILSYL-PTRLAIKTSVLSRRWRHVWSDTWSLSFHRDRPDAPCINRIL 95
Query: 148 -EDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
+ KM +C+ A I + H +D W++ A
Sbjct: 96 DRYRAPKMMSFRICSCCRAAC-----ISRPDTHAD-------------IDSWINFAMSRN 137
Query: 207 IKELDFHVNKGIYIFPPSFFSSVTLTGLRLS-CCNLGFFN-----NIKLPNLKNLYLQKL 260
++ L ++++ Y P + + +L L L C F + ++ +LKNL L
Sbjct: 138 VENLSLYLDEDKYDIPEFLYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLSLYHC 197
Query: 261 DSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPY 320
+ + +I ++ C +E L L C L+ + + RL +EI +M+ ++ AP+
Sbjct: 198 NISDESIAIILSGC-PILESLLLFFCKKLKVLDLSKSPRLITLEITRRCRMEPTQLVAPH 256
Query: 321 LDTFGYCGKRTNSCK-VDLEDCKSLKRLSLD 350
+ C + NS K L D SL + LD
Sbjct: 257 IR----CLRLINSEKPCALVDVSSLSQAELD 283
>AT3G58940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21781002-21783213 REVERSE LENGTH=618
Length = 618
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
MD +S LP EV HILS L K TS+LS+ W +W + L D+ F ++G
Sbjct: 1 MDRVSNLPEEVRCHILSFL-PTKHAALTSVLSKSWLNLWKFETNLDIDDSDFLHPEEGKA 59
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDH---WLDLAK 203
+ D ++ F + V L + PI+K L +T + DH W+
Sbjct: 60 ERDEIRQSFVEFVDGVLALQGDS--PIEKFSLKCIT---------GIHPDHVNRWICNVL 108
Query: 204 ESGIKEL----DFH----VNKGIYIFPPSFFSSVTLTGLRLS---CCNLGFFN-NIKLPN 251
+ G+ +L DF G Y P F S TL L+L C N ++ LPN
Sbjct: 109 QRGVSDLYLFTDFSDEDTEEDGGYRLPQEMFVSRTLVKLKLRSEHCVNWWHWDIGASLPN 168
Query: 252 LKNL 255
LK+L
Sbjct: 169 LKSL 172
>AT3G03030.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:682252-683850 FORWARD LENGTH=474
Length = 474
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD +S LP +V HILS L K+ TS+LS+KWR ++ L D+ ++ + E+
Sbjct: 1 MDLVSSLPDDVRCHILSFL-TTKESALTSVLSKKWRNLFTLVPNLDLDDSEY---LHPEE 56
Query: 150 TSQKMFRDHVCASLNAHAER------NLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAK 203
T K R+ + S ER N PI++ L + G+ A L + WL
Sbjct: 57 T--KWEREEILDSFLDFVERVLSLQGNGPIRRFSLRCES-----GVPPARL-NRWLCKVL 108
Query: 204 ESGIKELDFHVN-KGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIK-LPNLKNLYLQKLD 261
+ G+ +L+ ++ + Y+ P F S TL LRL F I P + +L +L
Sbjct: 109 QRGVADLELIIDFEDGYLLPRELFVSETLVNLRLK----SEFGCIHWWPGAEGTFLPRLQ 164
Query: 262 STQHNILNLIFC---------CRHSIEDLRLI 284
S + ++FC C IE+LRL+
Sbjct: 165 SLDISS-AMVFCDDKLQKLLPCFPVIEELRLV 195
>AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=413
Length = 413
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP +I IL L + KD VRTS LS KWR +W S L D +
Sbjct: 19 DRISQLPEPLISEILFHL-STKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSF 77
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+ F H R+ I+KL L + D + W+D A I+ L
Sbjct: 78 VESFFDSH----------RDSWIRKLRLDLGYH------HDKYDLMSWIDAATTRRIQHL 121
Query: 211 D---FHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHNI 267
D FH NK P S ++ TL LRL L + LP LK ++ + +
Sbjct: 122 DVHCFHDNK----IPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETT 177
Query: 268 LNLIFCCRHSIEDLRLIQCSGLR-NVCFANLNRLNRVEIYNCNKMKSVKINAPYL 321
L + +E+L L + NV + L R++I N+ V I AP L
Sbjct: 178 LQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDI---NEFIDVVIYAPLL 229
>AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16754436-16756263 REVERSE LENGTH=540
Length = 540
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 43/254 (16%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIGQ 147
D IS LP +I HILS L K+ T++L+++W+ + L FD+ + + +
Sbjct: 14 DRISGLPDALICHILSFLPT-KEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNK 72
Query: 148 EDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDAL---LMDHWLDLAKE 204
S + F V + L A+ P+K+ V ED + + W+ +
Sbjct: 73 YSKSYESFMSFVDSVLALQAKTKTPLKRF---------HVKCEDVVDQSWVLEWIPKVLK 123
Query: 205 SGIKELDFHV--------NKGIYIFPPSFFSSVTLTGLRLS---CCNLGFFNNIKLPNLK 253
G+ ++D H+ N Y P F S TL L++ ++ + LP LK
Sbjct: 124 RGVLDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQDGVHIDVEGGVSLPKLK 183
Query: 254 NLYLQKLDSTQHNILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKS 313
L+L + ++LN + H++E+L L ANL + E C+
Sbjct: 184 TLHLDYF-KIETSMLNKLLSGCHALEELVL-----------ANLMWADSSEDEACH---- 227
Query: 314 VKINAPYLDTFGYC 327
V ++ P L +C
Sbjct: 228 VSVSIPTLKRLNFC 241
>AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=435
Length = 435
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS+LP +I IL L + KD VRTS LS KWR +W S L D +
Sbjct: 19 DRISQLPEPLISEILFHL-STKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSF 77
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+ F H R+ I+KL L + D + W+D A I+ L
Sbjct: 78 VESFFDSH----------RDSWIRKLRLDLGYH------HDKYDLMSWIDAATTRRIQHL 121
Query: 211 D---FHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHNI 267
D FH NK P S ++ TL LRL L + LP LK ++ + +
Sbjct: 122 DVHCFHDNK----IPLSIYTCTTLVHLRLRWAVLTNPEFVSLPCLKIMHFENVSYPNETT 177
Query: 268 LNLIFCCRHSIEDLRLIQCSGLR-NVCFANLNRLNRVEIYNCNKMKSVKINAPYL 321
L + +E+L L + NV + L R++I N+ V I AP L
Sbjct: 178 LQKLISGSPVLEELILFSTMYPKGNVLQLRSDTLKRLDI---NEFIDVVIYAPLL 229
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 30/273 (10%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS LP EV+ ILS + K V TSILS++W +W + L F +++
Sbjct: 1 MDRISGLPDEVLVKILSFV-PTKVAVSTSILSKRWEFLWMWLTKLKFGSKRY-------- 51
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKL-VLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
S+ F+ C +RNLP+ + V+ ++S + W+ +A I+
Sbjct: 52 -SESEFKRLQC-----FLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR 105
Query: 209 ELDF---HVNKGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNNIKLPNLKNLYLQKLDSTQ 264
EL H + I P S ++ +L L+L L + LP+LK L L+ + +
Sbjct: 106 ELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFK 165
Query: 265 HNILNLIFCCRHSIEDLRLIQCS-----GLRNVCFANLNRLNRVEIYNCNKMKSVKINAP 319
L + C +EDL ++ S G V +L RL+ + + I+ P
Sbjct: 166 QGSLQRLLCNCPVLEDL-VVNLSHHDNMGKLTVIVPSLQRLS----LSTPSSREFVIDTP 220
Query: 320 YLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHP 352
L +F + NS +E+ L+ ++ P
Sbjct: 221 SLLSFQLVDRNDNSHTFLIENMPKLREAYINVP 253
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 30/273 (10%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS LP EV+ ILS + K V TSILS++W +W + L F +++
Sbjct: 1 MDRISGLPDEVLVKILSFV-PTKVAVSTSILSKRWEFLWMWLTKLKFGSKRY-------- 51
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKL-VLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
S+ F+ C +RNLP+ + V+ ++S + W+ +A I+
Sbjct: 52 -SESEFKRLQC-----FLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR 105
Query: 209 ELDF---HVNKGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNNIKLPNLKNLYLQKLDSTQ 264
EL H + I P S ++ +L L+L L + LP+LK L L+ + +
Sbjct: 106 ELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFK 165
Query: 265 HNILNLIFCCRHSIEDLRLIQCS-----GLRNVCFANLNRLNRVEIYNCNKMKSVKINAP 319
L + C +EDL ++ S G V +L RL+ + + I+ P
Sbjct: 166 QGSLQRLLCNCPVLEDL-VVNLSHHDNMGKLTVIVPSLQRLS----LSTPSSREFVIDTP 220
Query: 320 YLDTFGYCGKRTNSCKVDLEDCKSLKRLSLDHP 352
L +F + NS +E+ L+ ++ P
Sbjct: 221 SLLSFQLVDRNDNSHTFLIENMPKLREAYINVP 253
>AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678588 FORWARD LENGTH=353
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 86 SLDPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERK 140
S+D MD IS LP E++HHILS + K +RTS+LS++WR +W L D R+
Sbjct: 6 SIDGMDFISSLPDEILHHILSSVPT-KSAIRTSLLSKRWRYVWSETPSLSIDCRR 59
>AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678907 FORWARD LENGTH=458
Length = 458
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 86 SLDPMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERK 140
S+D MD IS LP E++HHILS + K +RTS+LS++WR +W L D R+
Sbjct: 6 SIDGMDFISSLPDEILHHILSSV-PTKSAIRTSLLSKRWRYVWSETPSLSIDCRR 59
>AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr4:6224691-6225905
FORWARD LENGTH=316
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD I LP EV+ ILS + K V TSILS++W +W + L F +++
Sbjct: 1 MDRIIGLPDEVLVKILSFVPT-KVAVSTSILSKRWEFLWMWLTKLKFGSKRY-------- 51
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKL-VLHMVTFMVSVGLEDALLMDHWLDLAKESGIK 208
S+ F+ L +RNLP+ + V+ ++S + W+ +A I+
Sbjct: 52 -SESEFK-----RLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR 105
Query: 209 ELDF---HVNKGIYIFPPSFFSSVTLTGLRL-SCCNLGFFNNIKLPNLKNLYLQKLDSTQ 264
EL H + I P S ++ +L L+L L + LP+LK L L+ + +
Sbjct: 106 ELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFK 165
Query: 265 HNILNLIFCCRHSIEDL--RLIQCS--GLRNVCFANLNRLNRVEIYNCN 309
L + C +EDL L++C G+ V +L RL+ CN
Sbjct: 166 QGSLQRLLCNCPVLEDLFVLLLRCDDIGMFIVIVPSLQRLSLYLSPRCN 214
>AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=345
Length = 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
MD + LP E++ HILS L K+ TS+LS++WR + L FD+ F ++G
Sbjct: 1 MDRVGSLPDELLSHILSFL-TTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKP 59
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
+ D ++ F D V L AE PIKK L +G+ D+ +D W+ G
Sbjct: 60 ERDEIRQSFMDFVDRVLALQAES--PIKKFSLK-----CRIGV-DSDRVDGWISNVLNRG 111
Query: 207 IKELDFHV 214
+ ELD +
Sbjct: 112 VSELDLLI 119
>AT1G48400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:17882136-17883855
REVERSE LENGTH=513
Length = 513
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 89 PMDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQE 148
P D IS LP E++ ILSLL K TS+LS++WR + L FDE +E
Sbjct: 8 PRDSISNLPDEILGKILSLLPT-KVAASTSVLSKRWRNLLGLVDNLCFDESMVVYPNEEE 66
Query: 149 DTSQKM----FRDHVCASL-NAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAK 203
+TS + F D A L N+H IKK L V + + ++ ++ W+
Sbjct: 67 ETSGSLRFCDFVDKTFALLSNSH------IKKFSLSRV-YKYNDDVDG--MVRRWIRTVM 117
Query: 204 ESGIKELDFHVNKGIYI-FPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDS 262
E G+ E+ H ++ +S TL L LS + P LK+L L +
Sbjct: 118 ERGLLEIHLHATPMSFVAIETKLLTSNTLVKLTLSARCFVEVERVFFPALKSLSLFSILG 177
Query: 263 TQHNILNLIFCCRHSIE------DLRLIQCSGLRNVCFANLNRLNRVEIYNCNKM---KS 313
N + LI C E D ++ + NV A+L RL + +N N+M +
Sbjct: 178 DYTNYIRLIDGCPVLEELYMRDGDYPFLRLTCGTNVESASLKRL-VIFTHNPNEMIWHEL 236
Query: 314 VKINAP---YLDTFGYCGKRTNSCKVDL 338
+ AP YLD Y + + DL
Sbjct: 237 IYFEAPSLVYLDYSSYVSAKYDVVDFDL 264
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 104/259 (40%), Gaps = 36/259 (13%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS LP + + ILSLL KDV+ TS+LS++WR +W K + + ++
Sbjct: 1 MDSISLLPDDFLLRILSLLPT-KDVLNTSVLSKRWRYLWKLVP-------KLQYSLIDKN 52
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKE 209
F V SL L L L V +G W+ +A E G+ E
Sbjct: 53 ADHGTFVRFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGF--------WVRIAVEKGLCE 104
Query: 210 LDF---HVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHN 266
LDF H P S F+ TLT L+L N+ L +++ KL T H
Sbjct: 105 LDFDYEHYKTEPCRLPQSLFTCGTLTVLKL--------KNVSLKDVQFPVCFKLLKTLH- 155
Query: 267 ILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPYLDTFGY 326
+ +IF + + + L L + + L R + N M S + P L F Y
Sbjct: 156 LEYVIFLDKETPQKL-------LSSCPILEVFDLTRDDDDVDNVM-SFSVMVPSLQRFIY 207
Query: 327 CGKRTNSCKVDLEDCKSLK 345
CG ++ K LK
Sbjct: 208 CGGSGAELVMNTPSLKYLK 226
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 104/259 (40%), Gaps = 36/259 (13%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
MD IS LP + + ILSLL KDV+ TS+LS++WR +W K + + ++
Sbjct: 1 MDSISLLPDDFLLRILSLLPT-KDVLNTSVLSKRWRYLWKLVP-------KLQYSLIDKN 52
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKE 209
F V SL L L L V +G W+ +A E G+ E
Sbjct: 53 ADHGTFVRFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGF--------WVRIAVEKGLCE 104
Query: 210 LDF---HVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHN 266
LDF H P S F+ TLT L+L N+ L +++ KL T H
Sbjct: 105 LDFDYEHYKTEPCRLPQSLFTCGTLTVLKL--------KNVSLKDVQFPVCFKLLKTLH- 155
Query: 267 ILNLIFCCRHSIEDLRLIQCSGLRNVCFANLNRLNRVEIYNCNKMKSVKINAPYLDTFGY 326
+ +IF + + + L L + + L R + N M S + P L F Y
Sbjct: 156 LEYVIFLDKETPQKL-------LSSCPILEVFDLTRDDDDVDNVM-SFSVMVPSLQRFIY 207
Query: 327 CGKRTNSCKVDLEDCKSLK 345
CG ++ K LK
Sbjct: 208 CGGSGAELVMNTPSLKYLK 226
>AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:22254405-22255798 FORWARD LENGTH=403
Length = 403
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQED 149
+D +S LP ++ ILS L + KD VRTS+LS+ WR +W +L + F D +
Sbjct: 13 IDRLSALPEHLLCRILSEL-STKDSVRTSVLSKHWRNLWLHVPVLELETSDFPDNL---- 67
Query: 150 TSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWL--DLAKES-- 205
+FR+ + + E +L + + V+V D L W+ D+ K
Sbjct: 68 ----VFREFIDRFVGFDKEIDLKSFD-----IFYDVNVLWYDDFL---WMIDDVVKRRVC 115
Query: 206 --GIKELDFHVNKGIYIFPPSFFSSVTLTGLRLSCCNLGFF--NNIKLPNLKNLYLQKLD 261
+ + VN+ + P S +S TL L LS + ++ LP +K LYL +
Sbjct: 116 DLMVTNNPYVVNEKLVKMPISLYSCATLVNLNLSFVAMNNLPSESVCLPRVKTLYLHGVK 175
Query: 262 STQHNILNLIFCCRHSIEDLRLIQCSG--LRNVCF 294
+IL + +EDL ++ G + VCF
Sbjct: 176 LDGDSILGTLVSSCSVLEDLTVVTHPGDYEKVVCF 210
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 28/253 (11%)
Query: 91 DCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDT 150
D IS LP ++ ILS L + K+ V TS+LS++WR +W +L D F D
Sbjct: 15 DRISNLPDSLLCQILSDL-STKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDD------ 67
Query: 151 SQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESGIKEL 210
+F V L + E++L KL+ V DA W++ + +
Sbjct: 68 --DVFVSFVNRFLGSENEQHLERFKLIYE-------VNEHDASRFKSWINAVIKRRVCHF 118
Query: 211 DFHV----NKGIYIFPPSFFSSVTLTGLRLSCCNLGFFNNIKLPNLKNLYLQKLDSTQHN 266
+ H + + P S +S L L+L L ++ LP +K ++L + +
Sbjct: 119 NVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDMVKYDADS 178
Query: 267 ILNLIFCCRHSIEDLRLIQ--CSGLRNVCFANLNRLNRVEIYNCNKMKS----VKINAPY 320
L ++ +E+L +++ L VC + L +I + + +S V I+AP
Sbjct: 179 TLEILISGCPVLEELTIVRDPNDSLEVVCVRS-QSLKSFKI-DSERYESQNHVVTIDAPR 236
Query: 321 LDTFGYCGKRTNS 333
L+ C R++S
Sbjct: 237 LEYMNLCDHRSDS 249
>AT3G58820.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21752960-21754615 FORWARD LENGTH=413
Length = 413
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 90 MDCISKLPLEVIHHILSLLRNVKDVVRTSILSRKWRGIWYSYSLLVFDERKF---KDGIG 146
MD +S LP E++ HILS L K+ TSILS++WR + L D+ F ++G
Sbjct: 1 MDGVSSLPNELLCHILSFL-TTKEAALTSILSKRWRNLIAFVPNLYIDDTVFLHPEEGKR 59
Query: 147 QEDTSQKMFRDHVCASLNAHAERNLPIKKLVLHMVTFMVSVGLEDALLMDHWLDLAKESG 206
+ F D V L N PIKK L +T + D++ +D W+ G
Sbjct: 60 DRPEIIQSFMDFVDRILALQG--NYPIKKCSLKCLTEV------DSVRVDAWISNVLARG 111
Query: 207 IKELDFHV-----NKGIYIFPPSFFSSVTLTGLRL 236
+ +LD + + Y P S TL L++
Sbjct: 112 VTDLDLLIILDCESDDNYRLSPKCLQSSTLVSLKI 146
>AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:22846069-22847615 REVERSE LENGTH=455
Length = 455
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 50/235 (21%)
Query: 52 FQGELEIDPMDQAEDNVNCAQQVQGENVVVPMDQSLDPMDCISKLPLEVIHHILSLLRNV 111
FQG+++ M+++ +NC Q + NV D IS LP +++ HILSLL
Sbjct: 10 FQGKIQ---MNESRKKLNC--QSRQFNV-----------DKISDLPEDLLVHILSLLPTT 53
Query: 112 KDVVRTSILSRKWRGIWYSYSLLVFDERKFKDGIGQEDTSQKMFRDHVCASLNAHAERNL 171
D+V TS +S++W +W L F++R + G+ S F +
Sbjct: 54 NDIVATSGVSKRWESLWTKVHKLRFNDRIYD---GKRYDSFLHFVE-------------- 96
Query: 172 PIKKLVLH----MVTFMVSVGLE-DALLMDHWLDLAKESGIKEL--DFHVNKGIYIFPPS 224
K L+LH +V+ +SVG + A + W+ LA + I EL + + G
Sbjct: 97 --KSLILHKAPTLVSLRLSVGPKCTADDIGLWIKLALDRNICELIIKHYPDHGHIRLSRR 154
Query: 225 FFSSVTLTGLRLSCCNLGFFNNIKLP----NLKNLYLQKLD-STQHNILNLIFCC 274
S TL L+L LG I LP +LK L+L+ + S ++ LI C
Sbjct: 155 LCDSKTLVSLKLKNAILG---AIWLPTCFISLKTLHLRYVKYSGDESVRTLISSC 206